Run summary data | |
Run summary data | log_20150120222742.txt |
Taxonomy assignments | |
OTU taxonomic assignments | rep_set_tax_assignments.txt |
OTU maps | |
Final map of OTU identifier to sequence identifers excluding OTUs with fewer than 2 sequences | final_otu_map_mc2.txt |
OTU tables | |
OTU table exluding OTUs with fewer than 2 sequences | otu_table_mc2.biom |
OTU table exluding OTUs with fewer than 2 sequences and including OTU taxonomy assignments | otu_table_mc2_w_tax.biom |
Sequences | |
OTU representative sequences | rep_set.fna |
New reference sequences (i.e., OTU representative sequences plus input reference sequences) | new_refseqs.fna |
Need help?
You can get answers to your questions on the QIIME Forum.
See the QIIME tutorials for examples of additional analyses that can be run.
You can find documentation of the QIIME scripts in the QIIME script index.