k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Phytophthora infestans RNA virus 1;t__ 0 0 0 0 0 0 0 120 120 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Gemmataceae;g__Gemmata;s__Gemmata obscuriglobus;t__Gemmata obscuriglobus UQM 2246 97 0 0 0 0 0 0 181382 181487 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-14578;t__ 3 0 0 16 20 139 0 111122 111301 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage Stitch;t__ 1 0 0 0 0 16 0 469 486 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Hibiscus latent Singapore virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Piscine myocarditis-like virus;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Saccharomyces cerevisiae killer virus M1;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified viruses;c__Torulaspora delbrueckii dsRNA Mbarr-1 killer virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pomovirus;s__Colombian potato soil-borne virus;t__ 0 0 0 0 0 0 0 242 242 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter hominis;t__Campylobacter hominis ATCC BAA-381 13 0 0 0 10 33 0 34169 34225 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas xanthomarina;t__ 0 0 4 0 0 127 0 91953 92084 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Caldanaerobacter;s__Caldanaerobacter subterraneus;t__Caldanaerobacter subterraneus subsp. tengcongensis 0 4 1 2 203 0 0 53578 53788 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Niameybacter;s__Niameybacter massiliensis;t__ 1 1 13 32 39 0 0 91465 91551 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces ghanaensis;t__Streptomyces ghanaensis ATCC 14672 31 0 7 0 5 874 0 162362 163279 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria fleischmannii;t__Listeria fleischmannii subsp. coloradonensis 0 1 3 8 0 0 0 55565 55577 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Goravirus;s__Gentian ovary ringspot virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Muromegalovirus;s__Murid betaherpesvirus 8;t__ 0 0 0 0 0 0 0 4058 4058 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Paenisporosarcina;s__Paenisporosarcina sp. TG-14;t__ 0 0 5 17 22 21 0 76201 76266 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Tick-borne encephalitis virus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Macacine alphaherpesvirus 1;t__ 0 0 0 0 0 6 0 3129 3135 k__Bacteria;p__Bacteroidetes;c__;o__Bacteroidetes Order II. Incertae sedis;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus marinus;t__Rhodothermus marinus DSM 4252 0 0 0 0 0 0 0 65232 65232 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma cricetuli;t__Mycoplasma cricetuli ATCC 35279 0 0 0 0 0 36 0 16837 16873 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces lividans;t__Streptomyces lividans TK24 0 0 5 0 4 898 0 162274 163181 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces specialis;t__ 0 0 17 0 4 89 0 116766 116876 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus chliarophilus;t__Meiothermus chliarophilus DSM 9957 0 0 0 0 0 256 0 92607 92863 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Caldicellulosiruptor;s__Caldicellulosiruptor saccharolyticus;t__Caldicellulosiruptor saccharolyticus DSM 8903 46 2 621 1 1 674 0 58060 59405 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Thaumetopoea pityocampa iflavirus 1;t__ 0 0 0 0 0 0 0 196 196 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Shigella;s__Shigella flexneri;t__Shigella flexneri 2a 109 26 356 453 35598 3114 0 52027 92142 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Epulopiscium;s__Epulopiscium sp. 'N.t. morphotype B';t__ 0 1 0 20 0 0 0 53485 53506 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter ruminantium;t__Methanobrevibacter ruminantium M1 0 0 0 0 0 7 0 58737 58744 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma hyopneumoniae;t__Mycoplasma hyopneumoniae J 0 0 0 0 0 347 0 17601 17948 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter;s__Thermoanaerobacter kivui;t__ 0 10 4 9 265 3752 0 43916 47956 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sanfranciscensis;t__Lactobacillus sanfranciscensis TMW 1.1304 0 0 1 5 4 243 0 25713 25966 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix;s__Lacinutrix sp. Hel_I_90;t__ 0 0 0 0 4 0 0 76389 76393 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira interrogans;t__Leptospira interrogans serovar Lai 0 0 0 0 0 484 0 93476 93960 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma felis;t__Mycoplasma felis ATCC 23391 0 0 0 0 0 6 0 16115 16121 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Broad bean mottle virus;t__ 0 0 0 0 0 0 0 161 161 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Sneathia;s__Sneathia amnii;t__ 4 0 0 0 6 0 0 26594 26604 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Paramecium bursaria Chlorella virus A1;t__Paramecium bursaria Chlorella virus FR483 0 0 0 0 0 0 0 6424 6424 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. FF9;t__ 106 0 0 16 1 44 0 91032 91199 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Sporocytophaga;s__Sporocytophaga myxococcoides;t__Sporocytophaga myxococcoides DSM 11118 0 0 0 3 2 0 0 126772 126777 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Ureaplasma;s__Ureaplasma canigenitalium;t__Ureaplasma canigenitalium ATCC 51252 0 0 0 0 0 0 0 16688 16688 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Lawsonia;s__Lawsonia intracellularis;t__Lawsonia intracellularis PHE/MN1-00 0 0 0 1 3 0 0 29148 29152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Paramecium bursaria Chlorella virus NY2A;t__ 0 0 0 0 0 71 0 7302 7373 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma columborale;t__Mycoplasma columborale ATCC 29258 0 0 0 0 0 34 0 18083 18117 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Carboxydothermus;s__Carboxydothermus hydrogenoformans;t__Carboxydothermus hydrogenoformans Z-2901 0 0 2 2 6 0 0 48020 48030 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polydnaviridae;o__;f__;g__Ichnovirus;s__Campoletis sonorensis ichnovirus;t__ 0 0 0 0 0 0 0 4760 4760 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage WRP3;t__ 0 0 0 1 0 576 0 2023 2600 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma melliferum;t__Spiroplasma melliferum KC3 0 0 0 0 0 85 0 25113 25198 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Criblamydiaceae;g__Criblamydia;s__Criblamydia sequanensis;t__Criblamydia sequanensis CRIB-18 0 0 0 0 0 0 0 59349 59349 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus badius;t__ 6 0 7 4 13 65 23070 58074 81239 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma meleagridis;t__Mycoplasma meleagridis ATCC 25294 0 0 0 0 0 13 0 12630 12643 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter saguini;t__ 0 0 0 3 1 25 0 57550 57579 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Spring beauty latent virus;t__ 0 0 0 0 0 0 0 163 163 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma ovipneumoniae;t__Mycoplasma ovipneumoniae NM2010 0 0 0 0 0 36 0 21440 21476 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium geofontis;t__Thermodesulfobacterium geofontis OPF15 0 0 0 0 0 0 0 32687 32687 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanospirillaceae;g__Methanospirillum;s__Methanospirillum hungatei;t__Methanospirillum hungatei JF-1 0 0 0 10 0 0 0 70884 70894 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma sturni;t__Mycoplasma sturni DSM 22021 0 0 0 0 0 32 0 16225 16257 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium johnsoniae;t__ 0 0 0 0 25 63 0 102106 102194 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma dispar;t__ 0 0 0 0 0 38 0 21650 21688 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma syrphidicola;t__Spiroplasma syrphidicola EA-1 0 0 0 0 0 341 0 21805 22146 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma felifaucium;t__Mycoplasma felifaucium ATCC 43428 0 0 0 0 0 25 0 15205 15230 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma flocculare;t__Mycoplasma flocculare ATCC 27399 0 0 0 0 0 0 0 15577 15577 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma cloacale;t__Mycoplasma cloacale ATCC 35276 0 0 0 0 0 12 0 13195 13207 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9312 0 0 0 0 0 2 288 33894 34184 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma auris;t__Mycoplasma auris 15026 0 0 0 0 0 37 0 15287 15324 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Entomoplasma;s__Entomoplasma luminosum;t__Entomoplasma luminosum ATCC 49195 0 0 6 4 3 0 0 20364 20377 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter;s__Thermoanaerobacter wiegelii;t__Thermoanaerobacter wiegelii Rt8.B1 0 7 0 8 2 1068 0 54616 55701 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__;s__Caviid betaherpesvirus 2;t__ 0 0 0 0 0 0 0 4670 4670 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polydnaviridae;o__;f__;g__Bracovirus;s__Cotesia congregata bracovirus;t__ 0 0 0 0 0 0 0 11290 11298 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Sweet potato badnavirus A;t__ 0 0 0 0 0 0 0 161 161 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus icigianus;t__ 0 0 0 0 1 365 0 68399 68765 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma feriruminatoris;t__ 0 0 0 0 0 95 0 20081 20176 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Aphanothecaceae;g__Crocosphaera;s__Crocosphaera watsonii;t__Crocosphaera watsonii WH 8501 0 0 3 0 0 0 0 124124 124127 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter pylori;t__Helicobacter pylori 26695 0 0 0 6 0 38 0 33312 33356 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma culicicola;t__Spiroplasma culicicola AES-1 0 0 3 1 0 1 0 23497 23502 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus odorifer;t__ 2 0 0 12 4 724 0 135507 136249 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Fusarium poae virus 1-240374;t__ 0 0 0 0 0 16 0 75 91 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium profundum;t__ 2 0 0 0 0 0 0 58279 58281 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus odysseyi;t__Lysinibacillus odysseyi 34hs-1 = NBRC 100172 51 0 0 4 11 3 0 90078 90147 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus thermodenitrificans;t__Geobacillus thermodenitrificans NG80-2 0 1 7 8 39 413 0 70538 71006 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma cynos;t__Mycoplasma cynos C142 0 0 0 0 0 112 0 19850 19962 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Hibiscus latent Fort Pierce virus;t__ 0 0 0 0 0 0 0 128 128 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma litorale;t__ 0 0 2 0 0 1 0 24507 24510 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Mesoplasma;s__Mesoplasma syrphidae;t__Mesoplasma syrphidae ATCC 51578 1 0 35 6 0 1 0 18232 18275 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Italian clover phyllody phytoplasma;t__Italian clover phyllody phytoplasma str. MA1 0 0 0 0 0 672 0 10901 11573 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__[Haemophilus] parasuis;t__Haemophilus parasuis SH0165 0 0 53 0 115 39 0 45168 45383 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma californicum;t__ 0 0 0 0 0 94 0 15782 15876 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Cyprinivirus;s__Cyprinid herpesvirus 3;t__ 0 0 0 0 0 0 0 5902 5902 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter macacae;t__Helicobacter macacae MIT 99-5501 0 0 0 6 0 22 0 47124 47152 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma hyorhinis;t__Mycoplasma hyorhinis SK76 0 0 0 0 0 3 0 16728 16737 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Caldicellulosiruptor;s__Caldicellulosiruptor bescii;t__Caldicellulosiruptor bescii DSM 6725 41 1 271 3 0 139 0 57939 58394 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus sp. OT;t__ 14 8 0 0 13 55 0 113424 113514 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma anseris;t__Mycoplasma anseris ATCC 49234 0 0 0 0 0 39 0 14705 14744 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium cauense;t__Flavobacterium cauense R2A-7 0 1 0 0 5 117 0 62082 62205 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Ureaplasma;s__Ureaplasma diversum;t__Ureaplasma diversum NCTC 246 0 0 0 0 0 1 0 20008 20009 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma diminutum;t__Spiroplasma diminutum CUAS-1 0 0 4 1 0 65 0 18835 18905 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma collis;t__Mycoplasma collis ATCC 35278 0 0 0 0 0 5 0 17950 17955 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma yeatsii;t__Mycoplasma yeatsii GM274B 0 0 0 0 0 0 0 17901 17901 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfosarcina;s__Desulfosarcina sp. BuS5;t__ 0 0 0 0 4 0 0 71490 71494 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-25496;t__ 10 0 1 6 8 555 0 96474 97069 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Bittarella;s__Bittarella massiliensis;t__ 0 0 0 41 0 0 0 56012 56053 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium gilvum;t__ 0 0 0 0 17 0 0 88034 88051 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter sp. MIT 01-6451;t__ 0 0 0 9 4 253 0 40516 40782 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma synoviae;t__Mycoplasma synoviae ATCC 25204 0 0 0 0 0 101 0 16828 16929 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma hyosynoviae;t__ 0 0 0 0 0 0 0 16874 16874 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma chrysopicola;t__Spiroplasma chrysopicola DF-1 0 0 0 0 0 0 0 22466 22466 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Kutzneria;s__Kutzneria sp. 744;t__ 0 0 7 0 13 0 0 227565 227585 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroserpens;s__Psychroserpens sp. Hel_I_66;t__ 0 0 0 3 229 44 0 76583 76859 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma cantharicola;t__ 0 0 4 3 0 13 0 23571 23591 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium funditum;t__Carnobacterium funditum DSM 5970 0 3 63 44 7 62 0 46866 47045 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma eriocheiris;t__ 0 0 1 0 0 13 0 27300 27314 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma apis;t__Spiroplasma apis B31 0 0 3 1 0 29 0 23178 23211 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum conyzoides symptomless alphasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Ceratocystis polonica partitivirus;t__ 0 0 0 0 0 0 0 89 89 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. DMHC 10;t__ 0 0 0 0 189 6 0 79554 79749 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Cyprinivirus;s__Cyprinid herpesvirus 1;t__ 0 0 0 2 0 0 0 5820 5822 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter fennelliae;t__Helicobacter fennelliae MRY12-0050 0 0 0 4 0 85 0 42920 43010 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus jensenii;t__ 0 0 3 1 0 73 0 33381 33458 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus trypoxylicola;t__ 0 0 2 3 1 3 0 86828 86837 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter sp. AbM4;t__ 0 0 0 0 0 76 0 39887 39963 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium koreense;t__Chryseobacterium koreense CCUG 49689 0 58 0 1 3 1188 0 61716 62966 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Cinara cedri) 0 0 2 0 0 0 3 8322 8327 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Black sea bass polyomavirus 1;t__ 0 0 0 0 0 0 0 147 147 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. URHB0009;t__ 0 0 0 1 0 3 0 107320 107324 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium hydatis;t__ 0 0 0 0 5 102 0 117260 117367 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium frigidarium;t__Flavobacterium frigidarium DSM 17623 0 0 0 0 0 64 0 72424 72488 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter hepaticus;t__Helicobacter hepaticus ATCC 51449 0 0 1 0 0 0 0 35981 35982 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Bibersteinia;s__Bibersteinia trehalosi;t__Bibersteinia trehalosi USDA-ARS-USMARC-192 24 2 212 0 168 0 0 47750 48156 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter bilis;t__Helicobacter bilis ATCC 51630 0 0 0 20 5 47 0 49182 49254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Staphylococcus phage SA1;t__ 0 0 0 419 289 173 0 2065 2946 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix;s__Lacinutrix jangbogonensis;t__ 26 0 0 0 32 73 0 80134 80265 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Leeuwenhoekiella;s__Leeuwenhoekiella sp. Hel_I_48;t__ 0 0 0 0 1200 27 0 84390 85617 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma pirum;t__Mycoplasma pirum ATCC 25960 0 0 0 0 0 1 0 16786 16787 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus endophyticus;t__ 0 0 6 30 67 200 0 97008 97311 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma canadense;t__ 0 0 0 0 0 50 0 13814 13864 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma alvi;t__Mycoplasma alvi ATCC 29626 0 0 0 0 0 30 0 16763 16793 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Inediibacterium;s__Inediibacterium massiliense;t__ 0 6 0 17 8 0 0 69881 69912 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__[Ruminococcus] torques;t__Ruminococcus torques ATCC 27756 5 13 0 255 369 19 0 54004 54665 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Lacticigenium;s__Lacticigenium naphtae;t__Lacticigenium naphtae DSM 19658 0 18 0 1 32 0 0 42502 42553 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Poinsettia branch-inducing phytoplasma;t__Poinsettia branch-inducing phytoplasma str. JR1 0 0 0 0 0 11 0 12274 12285 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Tachikawaea;s__Candidatus Tachikawaea gelatinosa;t__ 0 0 4 4 5 0 0 14155 14168 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blaberus giganteus);t__ 0 0 0 0 0 9 0 12574 12583 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus gastricus;t__Lactobacillus gastricus DSM 16045 0 0 2 1 0 71 0 36754 36836 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium sp. Leaf404;t__ 0 0 0 0 5 129 0 78627 78761 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma leonicaptivi;t__Mycoplasma leonicaptivi ATCC 49890 0 0 0 0 0 30 0 17755 17785 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Odoribacteraceae;g__Butyricimonas;s__Butyricimonas virosa;t__Butyricimonas virosa DSM 23226 0 1 0 246 1 29 0 93900 94177 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma mirum;t__Spiroplasma mirum ATCC 29335 0 0 0 0 0 330 0 22322 22652 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__Thermosipho;s__Thermosipho africanus;t__Thermosipho africanus TCF52B 1 0 20 14 5 23 0 40270 40333 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Aster yellows witches'-broom phytoplasma;t__Aster yellows witches'-broom phytoplasma AYWB 0 0 0 0 0 0 0 14131 14131 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus mundtii;t__Enterococcus mundtii QU 25 0 0 16 10 0 446 0 59971 60443 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium sp. CP1;t__ 0 1 59 71 2 338 0 51639 52110 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum halophilum;t__ 0 0 31 21 6 550 0 72752 73360 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Polyangiaceae;g__Sorangium;s__Sorangium cellulosum;t__Sorangium cellulosum So ce56 0 0 0 0 0 0 0 260675 260675 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Choristoneura occidentalis granulovirus;t__ 0 0 0 0 0 0 0 2094 2094 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__Fervidobacterium;s__Fervidobacterium pennivorans;t__Fervidobacterium pennivorans DSM 9078 41 0 2 0 0 672 0 42612 43327 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga;s__Cellulophaga algicola;t__Cellulophaga algicola DSM 14237 0 0 0 0 57 86 0 97624 97767 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces himastatinicus;t__Streptomyces himastatinicus ATCC 53653 0 0 2 0 0 191 0 207652 207845 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Formosa;s__Formosa algae;t__ 0 0 0 0 35 48 0 85614 85697 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium perfoetens;t__Fusobacterium perfoetens ATCC 29250 0 0 0 0 0 1 0 41994 41995 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus beijingensis;t__ 0 1 0 29 20 192 0 114757 114999 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium;s__Janthinobacterium sp. HH01;t__ 0 0 24 44 223 9 0 141991 142291 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma molare;t__Mycoplasma molare ATCC 27746 0 0 0 0 0 6 0 16765 16771 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Only Syngen Nebraska virus 5;t__ 0 0 0 0 0 2 0 6540 6542 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 67;t__ 0 0 0 0 0 0 0 247 247 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus farraginis;t__ 0 1 1 3 10 25 0 105474 105514 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter coli;t__ 0 0 0 0 0 0 0 1819 1863 k__Viruses;p__unclassified viruses;c__Leptopilina boulardi filamentous virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 2143 2143 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Canid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2503 2503 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma simbae;t__Mycoplasma simbae ATCC 49888 0 0 0 0 0 53 0 16977 17030 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenibacter;s__Arenibacter certesii;t__Arenibacter certesii DSM 19833 0 6 0 0 128 231 0 99135 99500 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Bernardetiaceae;g__Bernardetia;s__Bernardetia litoralis;t__Bernardetia litoralis DSM 6794 0 3 0 1 0 0 0 98382 98386 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Altibacter;s__Altibacter lentus;t__ 0 3 0 0 287 0 0 62865 63155 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium inhibens;t__Carnobacterium inhibens subsp. gilichinskyi 0 1 42 116 1 800 0 45996 46956 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Sea lion mastadenovirus A;t__California sea lion adenovirus 1 0 0 0 0 0 0 0 634 634 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella henselae;t__Bartonella henselae str. Houston-1 0 0 1 25 0 88 0 38506 38620 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. NATL2A 0 0 1 0 0 0 19 36837 36857 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium gallinarum;t__Carnobacterium gallinarum DSM 4847 0 1 64 245 0 378 0 80132 80820 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacula;s__Desulfobacula toluolica;t__Desulfobacula toluolica Tol2 2 0 0 0 3 0 0 103953 103958 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Adoxophyes orana nucleopolyhedrovirus;t__ 0 0 0 0 0 37 0 2197 2234 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus uvarum;t__Lactobacillus uvarum DSM 19971 0 0 5 139 12 687 0 52562 53406 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma canis;t__Mycoplasma canis PG 14 0 0 0 0 0 0 0 17948 17948 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium sp. ML3W;t__ 0 87 0 0 87 65 0 106341 106580 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] clariflavum;t__[Clostridium] clariflavum DSM 19732 7 13 319 111 64 747 0 96692 97953 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma arthritidis;t__Mycoplasma arthritidis 158L3-1 0 0 0 0 0 11 0 16107 16409 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium branchiophilum;t__Flavobacterium branchiophilum FL-15 0 0 0 0 11 80 0 71106 71197 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma iowae;t__Mycoplasma iowae 695 0 0 0 0 0 3 0 23765 23768 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Candidatus Neoehrlichia;s__Candidatus Neoehrlichia lotoris;t__Candidatus Neoehrlichia lotoris str. RAC413 0 0 0 0 9 0 0 25364 25373 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Helcococcus;s__Helcococcus sueciensis;t__Helcococcus sueciensis DSM 17243 3 2 0 0 14 0 0 31353 31372 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Turicibacter;s__Turicibacter sanguinis;t__Turicibacter sanguinis PC909 0 19 0 0 0 0 0 58814 58833 k__Bacteria;p__Chloroflexi;c__Ktedonobacteria;o__Ktedonobacterales;f__Ktedonobacteraceae;g__Ktedonobacter;s__Ktedonobacter racemifer;t__Ktedonobacter racemifer DSM 44963 0 1 0 0 0 0 0 273207 273208 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus bogoriensis;t__Bacillus bogoriensis ATCC BAA-922 57 0 0 0 1 33 0 99793 99884 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma hominis;t__Mycoplasma hominis ATCC 23114 0 0 0 0 0 32 0 13276 13308 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Numidum;s__Numidum massiliense;t__ 0 0 0 0 1 0 0 75099 75100 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix;s__Lacinutrix mariniflava;t__ 0 0 0 0 13 72 0 79334 79419 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma conjunctivae;t__ 4 0 0 0 0 9 0 16881 16894 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Pontibacillus;s__Pontibacillus yanchengensis;t__Pontibacillus yanchengensis Y32 3 0 2 0 8 9 0 85323 85345 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AD3010;t__ 0 0 0 6 0 30 0 70896 70932 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfurispora;s__Desulfurispora thermophila;t__Desulfurispora thermophila DSM 16022 0 0 0 0 1 0 0 56387 56388 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus shackletonii;t__ 1 42 10 80 66 458 0 104523 105180 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio alaskensis;t__Desulfovibrio alaskensis G20 40 44 43 0 0 27 0 74450 74604 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Cyclobacterium;s__Cyclobacterium marinum;t__Cyclobacterium marinum DSM 745 0 5 0 2 35 0 0 124383 124425 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium paucimobilis;t__Sphingobacterium paucimobilis HER1398 0 1 0 0 3 7 0 102475 102486 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Formosa;s__Formosa agariphila;t__Formosa agariphila KMM 3901 0 1 0 0 84 0 0 83998 84083 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Mesoplasma;s__Mesoplasma chauliocola;t__Mesoplasma chauliocola ATCC 49578 0 0 9 1 10 79 0 16717 16816 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tick virus 1;t__ 0 0 0 0 0 0 0 189 189 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina;s__Aquimarina latercula;t__Aquimarina latercula DSM 2041 0 0 0 0 33 4 0 124775 124812 k__Bacteria;p__Verrucomicrobia;c__Methylacidiphilae;o__Methylacidiphilales;f__Methylacidiphilaceae;g__Methylacidiphilum;s__Methylacidiphilum fumariolicum;t__Methylacidiphilum fumariolicum SolV 0 0 0 0 0 230 0 49303 49533 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Pandoravirus salinus;t__ 0 0 0 0 0 0 0 49477 49477 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Anoxybacillus;s__Anoxybacillus gonensis;t__ 9 4 16 12 134 0 0 55898 56073 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Thermosediminibacter;s__Thermosediminibacter oceani;t__Thermosediminibacter oceani DSM 16646 0 1 0 0 2 0 0 45597 45600 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Pandoravirus dulcis;t__ 0 0 0 0 0 12 0 38158 38170 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Onchocerca ochengi;t__ 0 0 0 0 0 5 0 19154 19159 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens;s__Nonlabens sediminis;t__ 0 0 0 0 3 0 0 58669 58672 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Pandoravirus inopinatum;t__ 0 0 0 0 0 2 0 44856 44858 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Runella;s__Runella limosa;t__Runella limosa DSM 17973 0 0 0 0 2 0 0 150410 150412 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cihuensis;t__ 0 0 1 13 10 123 0 108512 108659 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium ventriosum;t__Eubacterium ventriosum ATCC 27560 0 19 0 1138 0 52 0 56115 57324 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacter;s__Desulfobacter postgatei;t__Desulfobacter postgatei 2ac9 0 1 0 0 32 0 0 79383 79416 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus methanolicus;t__Bacillus methanolicus MGA3 2 0 31 7 51 165 0 66484 66740 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium punctulatus;t__Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 0 0 0 0 0 8 0 12106 12114 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-22090;t__ 7 2 22 103 58 66 0 83943 84201 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Gemella;s__Gemella sanguinis;t__Gemella sanguinis ATCC 700632 0 20 0 0 0 2 0 35794 35816 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus alvei;t__Paenibacillus alvei DSM 29 0 0 0 0 0 0 0 5575 5612 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium 28-4;t__ 3 0 0 13 138 144 0 84101 84399 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alteromonas;s__Alteromonas sp. LOR;t__ 0 0 3 10 5 346 0 87689 88053 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter lari;t__Campylobacter lari RM2100 0 0 0 0 6 649 0 30776 31431 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella halotolerans;t__Weissella halotolerans DSM 20190 0 0 0 18 0 3 0 27133 27154 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Planktothricoides;s__Planktothricoides sp. SR001;t__ 2 0 0 0 0 0 0 140630 140632 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus orisratti;t__Streptococcus orisratti DSM 15617 0 2 0 4 0 406 0 47711 48123 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Aureococcus anophagefferens virus;t__ 0 0 0 0 0 0 0 7418 7418 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella alsatica;t__Bartonella alsatica IBS 382 0 0 2 47 0 165 0 32669 32883 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter upsaliensis;t__Campylobacter upsaliensis DSM 5365 0 0 0 0 3 18 0 32281 32302 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Acanthocystis turfacea Chlorella virus 1;t__ 0 0 0 0 0 0 0 5760 5760 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium vrystaatense;t__ 2 1 0 0 14 1012 0 108696 109725 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Sophora japonica powdery mildew-associated partitivirus;t__ 0 0 0 0 0 0 0 75 75 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Domibacillus;s__Domibacillus tundrae;t__ 0 0 1 0 16 59 0 67676 67752 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Petrotogales;f__;g__Marinitoga;s__Marinitoga sp. 1197;t__ 0 0 0 0 0 0 0 45398 45398 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Cervidpoxvirus;s__Deerpox virus W-848-83;t__ 0 0 0 0 0 0 0 3325 3325 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium psychrophilum;t__Flavobacterium psychrophilum JIP02/86 1 1 0 0 30 167 0 56248 57207 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus faecalis;t__Enterococcus faecalis V583 0 1 24 28 0 164 0 63859 64360 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus simplex;t__ 4 0 22 23 83 250 0 106527 106909 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Roseolovirus;s__Macaca nemestrina herpesvirus 7;t__ 0 0 0 0 0 0 0 2712 2712 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter;s__Polaribacter vadi;t__ 0 1 0 0 10 0 0 76175 76186 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium sp. MB1;t__ 0 0 0 0 3 1578 0 38993 40595 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma gallisepticum;t__Mycoplasma gallisepticum str. R 0 0 0 0 0 0 0 20255 20255 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv8;o__;f__;g__;s__;t__ 0 853 0 0 0 0 0 0 853 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv7;o__;f__;g__;s__;t__ 0 854 0 0 0 0 0 3 857 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv10;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 854 854 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv5;o__;f__;g__;s__;t__ 0 852 0 0 0 0 0 1 853 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenibacter;s__Arenibacter latericius;t__Arenibacter latericius DSM 15913 0 0 0 0 20 0 0 89329 89349 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halopenitus;s__Halopenitus sp. DYS4;t__ 0 0 0 0 0 0 0 64009 64011 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella sp. TX077308;t__ 0 0 1 0 0 0 0 40717 40718 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Pyrodictiaceae;g__Pyrolobus;s__Pyrolobus fumarii;t__Pyrolobus fumarii 1A 0 0 0 0 14 0 0 36851 36865 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Ureaplasma;s__Ureaplasma parvum;t__Ureaplasma parvum serovar 3 0 0 0 0 0 17 0 15016 15033 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus indicus;t__ 2 0 0 1 11 32 0 81353 81399 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Nauphoeta cinerea);t__ 0 0 0 0 0 15 0 12444 12459 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenibacter;s__Arenibacter algicola;t__ 0 0 2 0 77 16 0 110905 111000 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridescent virus 9;t__Wiseana iridescent virus 0 0 0 0 0 0 0 4115 4115 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Anditalea;s__Anditalea andensis;t__ 0 2 0 16 0 0 0 108430 108448 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria lactamica;t__Neisseria lactamica 020-06 2 0 0 1 19 71 0 44318 44412 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter ubique;t__Candidatus Pelagibacter ubique HTCC8051 0 0 2 0 0 0 42 27853 27897 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter ubique;t__Candidatus Pelagibacter ubique HTCC1062 0 0 2 0 0 0 0 26173 26175 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus xylanilyticus;t__ 7 0 2 27 14 1 0 95132 95183 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Candidatus Endolissoclinum;s__Candidatus Endolissoclinum faulkneri;t__Candidatus Endolissoclinum faulkneri L2 0 0 1 1 0 0 0 29621 29623 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Mastotermes darwiniensis);t__Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 0 0 0 0 0 0 0 11743 11743 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Wheat blue dwarf phytoplasma;t__ 0 0 0 0 0 337 0 11882 12219 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sp. Leaf359;t__ 0 0 0 0 3 17 0 75389 75409 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Acetivibrio;s__Acetivibrio cellulolyticus;t__Acetivibrio cellulolyticus CD2 0 0 0 0 0 0 0 122719 122719 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Periplaneta americana);t__Blattabacterium sp. (Periplaneta americana) str. BPLAN 0 0 0 2 0 4 0 12733 12739 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polydnaviridae;o__;f__;g__Ichnovirus;s__Glypta fumiferanae ichnovirus;t__ 0 1 0 0 0 0 0 5636 5637 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium lacus;t__ 0 0 0 0 6 42 0 51627 51675 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium gallinarum;t__ 0 2 0 0 3 26 0 92641 92672 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 8;t__ 0 0 0 0 0 0 0 173 173 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia psittaci;t__Chlamydia psittaci 6BC 0 0 0 0 0 68 0 23365 23433 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus harenae;t__Paenibacillus harenae DSM 16969 0 0 0 0 2 13 0 139258 139273 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blattella germanica);t__Blattabacterium sp. (Blattella germanica) str. Bge 0 0 0 0 0 0 0 81 81 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Maruca vitrata nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2239 2239 k__Bacteria;p__Cyanobacteria;c__;o__Pleurocapsales;f__Hyellaceae;g__Myxosarcina;s__Myxosarcina sp. GI1;t__ 0 0 15 1 11 0 0 141156 141183 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sphaerochaeta;s__Sphaerochaeta globosa;t__Sphaerochaeta globosa str. Buddy 0 0 2 0 1 42 0 66284 66329 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Entomoplasma;s__Entomoplasma somnilux;t__Entomoplasma somnilux ATCC 49194 0 0 7 1 4 4 0 17273 17289 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Segetibacter;s__Segetibacter koreensis;t__Segetibacter koreensis DSM 18137 22 0 0 0 8 0 0 121935 121965 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus microti;t__ 0 0 0 3 2 489 0 46805 47299 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__secondary endosymbiont of Heteropsylla cubana;t__ 0 0 0 4 1 0 0 22426 22431 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Candidatus Pantoea carbekii;t__ 1 0 7 9 3 2 0 22999 23021 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Halorhodospira;s__Halorhodospira halophila;t__Halorhodospira halophila SL1 0 1 0 0 4 0 0 53564 53569 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Runella;s__Runella slithyformis;t__Runella slithyformis DSM 19594 0 0 0 0 0 22 0 131352 131374 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroserpens;s__Psychroserpens damuponensis;t__ 1 0 0 0 94 4 0 78618 78717 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. UNC438CL73TsuS30;t__ 0 0 0 0 0 11 0 111933 111944 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides graminisolvens;t__Bacteroides graminisolvens DSM 19988 = JCM 15093 0 0 0 0 0 27 0 72541 72568 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__Candidatus Protochlamydia;s__Candidatus Protochlamydia amoebophila;t__Candidatus Protochlamydia amoebophila UWE25 0 0 0 0 0 0 0 48287 48287 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus pallens;t__Enterococcus pallens ATCC BAA-351 0 0 13 14 1 124 0 108574 108726 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma elephantis;t__Mycoplasma elephantis ATCC 51980 0 0 0 0 0 2 0 15349 15351 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium thalpophilum;t__Sphingobacterium thalpophilum DSM 11723 0 96 0 0 20 140 0 117733 117989 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Roseolovirus;s__Human betaherpesvirus 6B;t__ 0 0 0 0 13 2 0 3227 3242 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Sebaldella;s__Sebaldella termitidis;t__Sebaldella termitidis ATCC 33386 0 0 0 0 15 0 0 88361 88376 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Kordia;s__Kordia zhangzhouensis;t__ 0 0 0 0 13 0 0 80526 80546 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus horikoshii;t__Bacillus horikoshii DSM 8719 1 1 1 4 8 26 0 93397 93438 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Cellulosilyticum;s__Cellulosilyticum lentocellum;t__Clostridium lentocellum DSM 5427 0 3 20 2 4 51 0 94204 94284 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Salinisphaerales;f__Salinisphaeraceae;g__Salinisphaera;s__Salinisphaera hydrothermalis;t__Salinisphaera hydrothermalis C41B8 0 0 3 0 0 2 0 85468 85473 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylobacter;s__Methylobacter marinus;t__Methylobacter marinus A45 0 0 20 0 34 0 0 99680 99734 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Syntrophomonadaceae;g__Dethiobacter;s__Dethiobacter alkaliphilus;t__Dethiobacter alkaliphilus AHT 1 0 1 0 0 0 0 0 62271 62272 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Allobaculum;s__Allobaculum stercoricanis;t__Allobaculum stercoricanis DSM 13633 9 176 0 0 8 0 0 40856 41049 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Dokdonia;s__Dokdonia donghaensis;t__Dokdonia donghaensis DSW-1 0 0 0 0 11 0 0 64327 64338 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus choshinensis;t__ 0 2 14 206 40 535 0 124523 125320 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-18017;t__ 1 2 13 26 124 302 0 104838 105306 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Dyadobacter;s__Dyadobacter crusticola;t__Dyadobacter crusticola DSM 16708 0 2 0 0 0 13 0 123349 123364 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium enshiense;t__Flavobacterium enshiense DK69 0 0 0 0 4 14 0 67635 67653 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera cerevisiae;t__Megasphaera cerevisiae DSM 20462 0 47 0 0 0 0 0 64299 64351 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina;s__Aquimarina pacifica;t__ 29 0 0 0 534 8 0 104409 104980 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus thailandensis;t__Lactobacillus thailandensis DSM 22698 = JCM 13996 0 0 1 0 1 110 0 41099 41211 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Amoebophilaceae;g__Candidatus Cardinium;s__Cardinium endosymbiont of Bemisia tabaci;t__Cardinium endosymbiont cBtQ1 of Bemisia tabaci 0 0 0 0 0 26 0 20206 20232 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Flexithrix;s__Flexithrix dorotheae;t__Flexithrix dorotheae DSM 6795 0 4 0 3 3 0 0 190464 190474 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter canis;t__Helicobacter canis NCTC 12740 0 0 0 9 5 79 0 38395 38488 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus perolens;t__Lactobacillus perolens DSM 12744 0 0 2 21 19 353 0 65604 66000 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Olivibacter;s__Olivibacter sitiensis;t__Olivibacter sitiensis DSM 17696 0 176 0 0 14 0 0 100634 100824 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Caldanaerobius;s__Caldanaerobius polysaccharolyticus;t__Caldanaerobius polysaccharolyticus DSM 13641 0 1 27 1 0 0 0 49914 49943 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfospira;s__Desulfospira joergensenii;t__Desulfospira joergensenii DSM 10085 0 0 0 0 19 0 0 122361 122380 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus megaterium;t__Bacillus megaterium NBRC 15308 = ATCC 14581 25 1 9 22 68 440 0 106297 106862 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria rocourtiae;t__Listeria rocourtiae FSL F6-920 0 0 6 8 0 135 0 63953 64102 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria weihenstephanensis;t__Listeria weihenstephanensis FSL R9-0317 0 0 5 9 0 27 0 67317 67358 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Trichodesmium;s__Trichodesmium erythraeum;t__Trichodesmium erythraeum IMS101 0 0 7 5 1 0 0 154989 155002 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__Succinatimonas;s__Succinatimonas hippei;t__Succinatimonas hippei YIT 12066 0 0 0 1 0 0 0 45774 45775 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus niacini;t__ 0 0 2 5 9 59 0 126951 127026 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Symphyonemataceae;g__Mastigocladopsis;s__Mastigocladopsis repens;t__Mastigocladopsis repens PCC 10914 0 0 22 18 0 0 0 129204 129244 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella baltica;t__Belliella baltica DSM 15883 0 11 0 3 0 0 0 83917 83931 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium cuenoti;t__Blattabacterium cuenoti BPAA 0 0 0 0 0 27 0 12622 12649 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfosarcina;s__Desulfosarcina cetonica;t__Desulfosarcina cetonica JCM 12296 1 1 1 0 1 0 0 140779 140783 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage SalinJah;t__ 0 0 0 0 0 0 0 3222 3222 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Holosporaceae;g__Holospora;s__Holospora undulata;t__Holospora undulata HU1 0 0 1 0 0 32 0 27632 27665 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Nafulsella;s__Nafulsella turpanensis;t__Nafulsella turpanensis ZLM-10 0 2 0 0 2 0 0 95903 95907 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Brochothrix;s__Brochothrix campestris;t__Brochothrix campestris FSL F6-1037 0 1 8 49 0 75 0 47090 47223 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomassiliicoccaceae;g__Candidatus Methanomethylophilus;s__Candidatus Methanomethylophilus sp. 1R26;t__ 0 0 0 0 0 0 0 34370 34370 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Budviciaceae;g__Pragia;s__Pragia fontium;t__ 7 12 34 244 42 0 0 81553 81892 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter sp. HTCC7211;t__ 0 0 2 0 2 73 0 29060 29137 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter ubique;t__Candidatus Pelagibacter ubique HIMB083 0 0 1 0 0 0 0 27918 27919 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage AR9;t__ 0 0 0 0 0 0 0 5020 5020 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Cohnella;s__Cohnella panacarvi;t__Cohnella panacarvi Gsoil 349 0 0 0 2 27 22 0 95366 95417 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus vietnamensis;t__Bacillus vietnamensis NBRC 101237 1 0 2 2 9 29 0 87942 87985 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Propionispora;s__Propionispora sp. 2/2-37;t__ 106 0 6 0 7 0 0 82232 82351 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__;s__alpha proteobacterium HIMB5;t__ 0 0 2 0 34 0 0 26828 26864 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cellulophaga phage phiSM;t__ 0 0 0 0 0 0 0 891 891 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium sp. JAH;t__ 0 0 0 0 1 105 0 77358 77464 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia epidermidihirudinis;t__ 0 0 0 2 0 20 0 77086 77108 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus mycoides;t__ 3 6 4 20 67 672 0 104345 105117 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus gilvus;t__Enterococcus gilvus ATCC BAA-350 1 4 32 113 1 430 0 83010 83591 k__Bacteria;p__Bacteroidetes;c__Saprospiria;o__Saprospirales;f__Saprospiraceae;g__Saprospira;s__Saprospira grandis;t__Saprospira grandis str. Lewin 0 8 0 0 0 0 0 86896 86904 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bdellovibrionaceae;g__Bdellovibrio;s__Bdellovibrio bacteriovorus;t__Bdellovibrio bacteriovorus W 0 1 0 0 0 0 31 60107 60139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Vibrio phage SHOU24;t__ 0 0 0 0 0 0 0 1556 1556 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus nodensis;t__Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 0 0 1 1 0 140 0 53330 53472 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Parageobacillus;s__Parageobacillus caldoxylosilyticus;t__Parageobacillus caldoxylosilyticus NBRC 107762 12 0 1 16 223 395 0 75081 75728 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Onion yellows phytoplasma;t__Onion yellows phytoplasma OY-M 0 0 0 0 0 311 0 16750 17061 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma kunkelii;t__Spiroplasma kunkelii CR2-3x 0 0 0 0 0 0 0 29014 29278 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocorpusculaceae;g__Methanocorpusculum;s__Methanocorpusculum bavaricum;t__Methanocorpusculum bavaricum DSM 4179 0 0 0 0 0 124 0 33866 33990 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosospira;s__Nitrosospira multiformis;t__Nitrosospira multiformis ATCC 25196 0 0 7 0 10 0 0 63667 63684 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__;s__Chitinophagaceae bacterium PMP191F;t__ 0 1 0 0 13 0 0 128915 128929 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Terrisporobacter;s__Terrisporobacter glycolicus;t__Terrisporobacter glycolicus ATCC 14880 = DSM 1288 0 0 0 0 15 0 0 80325 80340 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Cinara tujafilina) 0 0 1 1 0 0 8 8888 8898 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halalkalibacillus;s__Halalkalibacillus halophilus;t__Halalkalibacillus halophilus DSM 18494 0 0 0 0 17 0 0 54074 54091 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__;s__Myotis gammaherpesvirus 8;t__ 0 0 0 0 0 0 0 2591 2591 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Syntrophobotulus;s__Syntrophobotulus glycolicus;t__Syntrophobotulus glycolicus DSM 8271 0 4 0 0 24 0 0 68106 68134 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium V9D3004;t__ 0 0 0 0 7 14 0 68272 68293 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Rheinheimera;s__Rheinheimera nanhaiensis;t__Rheinheimera nanhaiensis E407-8 0 0 3 0 0 0 0 79639 79642 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Vitreoscilla;s__Vitreoscilla stercoraria;t__Vitreoscilla stercoraria DSM 513 0 0 0 0 11 21 0 51503 51535 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Xanthomarina;s__Xanthomarina gelatinilytica;t__ 6 0 0 0 28 0 0 60990 61024 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas caeni;t__Pseudomonas caeni DSM 24390 0 4 44 0 0 1 0 60355 60404 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulforegula;s__Desulforegula conservatrix;t__Desulforegula conservatrix Mb1Pa 1 5 3 0 1 0 0 88945 88955 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Parageobacillus;s__Parageobacillus toebii;t__Parageobacillus toebii NBRC 107807 1 0 2 4 252 93 0 64842 65194 k__Bacteria;p__Planctomycetes;c__Phycisphaerae;o__Phycisphaerales;f__Phycisphaeraceae;g__Phycisphaera;s__Phycisphaera mikurensis;t__Phycisphaera mikurensis NBRC 102666 0 0 0 0 0 0 0 76064 76064 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus sp. FC2018;t__ 0 0 0 1 13 41 0 47939 47994 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Papiine alphaherpesvirus 2;t__ 0 0 0 0 2 107 0 3020 3129 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus durans;t__ 0 0 7 23 0 172 0 57095 57341 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__;f__;g__;s__delta proteobacterium PSCGC 5451;t__ 0 0 5 0 0 0 0 54499 54504 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Kangiellaceae;g__Kangiella;s__Kangiella koreensis;t__Kangiella koreensis DSM 16069 0 0 13 2 0 0 0 57026 57041 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Ilyobacter;s__Ilyobacter polytropus;t__Ilyobacter polytropus DSM 2926 1 0 0 0 6 0 0 40922 40929 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus versmoldensis;t__Lactobacillus versmoldensis DSM 14857 = KCTC 3814 0 0 2 0 0 3 0 47349 47354 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Viridibacillus;s__Viridibacillus arvi;t__ 2 2 0 7 0 0 0 93851 93862 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thermoamylovorans;t__ 0 7 1 13 8 77 0 73832 73938 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flagellimonas;s__Flagellimonas sp. DK169;t__ 0 0 0 0 43 0 0 82600 82643 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Candidatus Portiera;s__Candidatus Portiera aleyrodidarum;t__Candidatus Portiera aleyrodidarum BT-B-HRs 0 0 2 0 0 0 0 7031 7033 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Persicobacteraceae;g__Persicobacter;s__Persicobacter sp. JZB09;t__ 0 0 0 0 0 0 0 75531 75531 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Blochmannia;s__Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus;t__ 0 0 2 1 0 0 0 15475 15478 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis biprosthecium;t__Asticcacaulis biprosthecum C19 0 0 4 0 6 4 0 105413 105427 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella hackeliae;t__ 0 0 19 2 0 184 0 68614 68819 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Azorhizobium;s__Azorhizobium doebereinerae;t__Azorhizobium doebereinerae UFLA1-100 0 2 1 18 15 65 0 115996 116097 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinilabiliaceae;g__Saccharicrinis;s__Saccharicrinis fermentans;t__Saccharicrinis fermentans DSM 9555 = JCM 21142 0 3 10 5 0 0 0 119546 119564 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pelagibaca;s__Pelagibaca bermudensis;t__Pelagibaca bermudensis HTCC2601 0 0 1 0 1887 0 0 106435 108323 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia minasensis;t__ 0 0 0 0 0 0 0 27948 27948 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. LL01;t__ 0 0 2 11 6 162 0 115297 115478 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus manliponensis;t__ 0 1 1 4 2 53 0 92614 92675 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Tolypothrichaceae;g__Tolypothrix;s__[Scytonema hofmanni] UTEX B 1581;t__[Scytonema hofmanni] UTEX 2349 1 0 2 37 0 0 0 162028 162069 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile;t__ 1 113 0 38 86 0 84203 872 85860 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium johnsoniae;t__Flavobacterium johnsoniae UW101 0 0 0 0 25 134 87 121691 121937 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Cytophaga;s__Cytophaga aurantiaca;t__Cytophaga aurantiaca DSM 3654 0 0 0 0 3 0 0 88331 88334 k__Bacteria;p__Chloroflexi;c__Thermomicrobia;o__Sphaerobacterales;f__Sphaerobacteraceae;g__Nitrolancea;s__Nitrolancea hollandica;t__Nitrolancea hollandica Lb 47 0 0 0 2 0 0 76307 76356 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium indicum;t__Flavobacterium indicum GPTSA100-9 = DSM 17447 3 1 0 0 27 44 0 59786 59861 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9201 0 0 1 1 0 14 183 33213 33412 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter oryzae;t__Pedobacter oryzae DSM 19973 0 1 0 0 12 1 0 68859 68873 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria nigro-viridis;t__Oscillatoria nigro-viridis PCC 7112 0 0 12 3 0 0 0 149565 149580 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Prolixibacteraceae;g__Sunxiuqinia;s__Sunxiuqinia dokdonensis;t__ 0 1 2 2 0 0 0 98829 98834 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Schizaphis graminum) 0 0 3 1 0 0 11 12814 12829 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma taiwanense;t__Spiroplasma taiwanense CT-1 0 0 4 1 0 41 0 21456 21502 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium soli;t__Flavobacterium soli DSM 19725 0 2 0 0 14 19 0 79896 79931 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Paramecium bursaria Chlorella virus AR158;t__ 0 0 0 0 0 2108 0 4785 6893 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella shakespearei;t__Legionella shakespearei DSM 23087 0 0 0 0 0 51 0 69945 69996 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes verus polyomavirus 5;t__ 0 0 0 0 0 0 0 99 99 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC2012;t__ 0 0 0 22 235 24 0 50825 51106 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Baizongia pistaciae) 0 0 2 0 0 0 1 12316 12319 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zhouia;s__Zhouia amylolytica;t__Zhouia amylolytica AD3 0 0 0 0 8 0 0 75689 75697 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus alveayuensis;t__ 0 0 0 0 42 20 0 133604 133668 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium greenlandense;t__ 0 0 0 0 0 0 0 80692 80692 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio salexigens;t__Desulfovibrio salexigens DSM 2638 0 2 0 0 0 62 0 85732 85796 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroflexus;s__Psychroflexus torquis;t__Psychroflexus torquis ATCC 700755 0 0 0 0 32 21 0 86383 86436 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Myroides;s__Myroides odoratus;t__Myroides odoratus DSM 2801 0 0 0 0 23 45 0 85764 85832 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__Ruminobacter;s__Ruminobacter sp. RM87;t__ 0 0 0 0 0 0 0 56883 56883 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Rhodonellum;s__Rhodonellum psychrophilum;t__Rhodonellum psychrophilum GCM71 = DSM 17998 0 0 0 6 1 0 0 103589 103596 k__Bacteria;p__;c__;o__;f__;g__;s__bacterium 336/3;t__ 3 0 0 0 0 0 0 94262 94265 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia canadensis;t__Rickettsia canadensis str. McKiel 0 0 0 0 0 18 0 23177 23195 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina;s__Aquimarina muelleri;t__Aquimarina muelleri DSM 19832 0 0 0 0 19 0 0 97793 97812 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Moorea;s__Moorea producens;t__Moorea producens JHB 23 0 4 0 0 0 0 186419 186446 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Sporolactobacillaceae;g__Sporolactobacillus;s__Sporolactobacillus laevolacticus;t__Sporolactobacillus laevolacticus DSM 442 0 0 2 5 0 0 0 71736 71743 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Uroleucon ambrosiae) 0 0 0 0 0 0 0 249 249 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermodesulfobiaceae;g__Thermodesulfobium;s__Thermodesulfobium narugense;t__Thermodesulfobium narugense DSM 14796 0 0 0 0 0 0 0 37977 37977 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Wigglesworthia;s__Wigglesworthia glossinidia;t__Wigglesworthia glossinidia endosymbiont of Glossina morsitans 1 0 0 2 0 0 4 14383 14390 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus acidiphilus;t__Desulfosporosinus acidiphilus SJ4 0 0 0 0 63 285 0 98188 98536 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Nautiliales;f__Nautiliaceae;g__Caminibacter;s__Caminibacter mediatlanticus;t__Caminibacter mediatlanticus TB-2 0 0 8 0 72 0 0 33130 33210 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. 1NLA3E;t__ 2 0 20 32 93 387 0 95778 96312 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium indologenes;t__ 19 37 0 0 54 150 0 97509 97769 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Schleiferiaceae;g__Schleiferia;s__Schleiferia thermophila;t__Schleiferia thermophila str. Yellowstone 0 0 0 2 0 0 0 52288 52290 k__BacteriaPlasmid;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Aster yellows witches'-broom phytoplasma;t__Aster yellows witches'-broom phytoplasma AYWB 0 0 0 0 0 0 0 339 342 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Candidatus Evansia;s__Candidatus Evansia muelleri;t__ 0 0 0 0 0 0 0 7149 7149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Zuko;t__ 0 0 0 0 27 47 0 3192 3266 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__;g__;s__Abalone herpesvirus Victoria/AUS/2009;t__ 0 0 0 0 0 0 0 4230 4230 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides salyersiae;t__Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 7 29 0 641 0 617 0 104867 106161 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium sp. 21;t__ 0 10 0 0 8 2 0 124508 124528 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter sp. Hv1;t__ 0 356 0 0 17 26 0 97465 97864 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella geestiana;t__ 0 0 2 0 0 14 0 50657 50673 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Paenisporosarcina;s__Paenisporosarcina sp. HGH0030;t__ 0 2 4 27 23 0 0 69787 69843 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blatta orientalis);t__Blattabacterium sp. (Blatta orientalis) str. Tarazona 0 0 0 2 0 9 0 12677 12688 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia conorii;t__Rickettsia conorii str. Malish 7 0 0 0 0 0 0 0 25375 25375 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] celerecrescens;t__ 0 2 0 11 15 22 0 100541 100591 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Acyrthosiphon kondoi) 0 0 2 2 0 0 32 12799 12835 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__;s__alpha proteobacterium HIMB114;t__ 0 0 0 0 0 0 0 24747 24747 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Apibacter;s__Apibacter mensalis;t__ 0 0 0 0 4 0 0 46427 46431 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema succinifaciens;t__Treponema succinifaciens DSM 2489 387 0 0 0 0 7 0 54243 54637 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Candidatus Pelagibacter;s__Candidatus Pelagibacter sp. IMCC9063;t__ 0 0 0 0 0 1 0 25693 25694 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Sulfurihydrogenibium;s__Sulfurihydrogenibium yellowstonense;t__Sulfurihydrogenibium yellowstonense SS-5 2 0 0 0 6 85 0 30164 30257 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__Parachlamydia;s__Parachlamydia acanthamoebae;t__Parachlamydia acanthamoebae UV-7 0 0 0 1 16 0 0 61426 61443 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus resistens;t__ 0 19 0 2 1 8 0 122522 122552 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter;s__Algibacter alginicilyticus;t__ 0 2 0 0 47 0 0 79846 79895 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga;s__Cellulophaga lytica;t__Cellulophaga lytica DSM 7489 0 2 3 0 71 16 0 75226 75318 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__Salmon gill poxvirus;t__ 0 0 0 0 0 0 0 4831 4831 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Blochmannia;s__Candidatus Blochmannia floridanus;t__ 0 0 1 2 0 6 0 14102 14111 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bacteriovoracaceae;g__Bacteriovorax;s__Bacteriovorax sp. Seq25_V;t__ 0 0 0 0 0 0 0 68977 68977 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. S7-1-8;t__ 0 1 0 869 1 758 0 54855 56484 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Cytophaga;s__Cytophaga hutchinsonii;t__Cytophaga hutchinsonii ATCC 33406 0 1 0 1 9 61 0 88592 88664 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium glycines;t__ 0 0 0 0 1 92 0 78780 78873 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus stellifer;t__ 0 2 0 33 30 633 0 112477 113175 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__;f__;g__;s__Flavobacteria bacterium MS024-3C;t__ 0 0 14 0 0 0 0 30252 30266 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Mitsuokella;s__Mitsuokella sp. oral taxon 131;t__Mitsuokella sp. oral taxon 131 str. W9106 0 0 0 0 2 0 0 46184 46186 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella rattimassiliensis;t__Bartonella rattimassiliensis 15908 0 0 1 17 0 59 0 41321 41398 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter felis;t__Helicobacter felis ATCC 49179 0 0 0 2 1 51 0 33399 33453 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia gallinacea;t__Chlamydia gallinacea 08-1274/3 0 0 0 0 0 21 0 21170 21191 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus badius;t__Bacillus badius NBRC 15713 0 0 1 1 9 7 5 79685 79708 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella corporis;t__Prevotella corporis DSM 18810 = JCM 8529 18 1 0 547 28 2717 0 52338 55649 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella fusca;t__Prevotella fusca JCM 17724 0 6 0 31 6 1290 0 63901 65234 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium daeguense;t__Chryseobacterium daeguense DSM 19388 0 0 0 0 0 120 0 84120 84240 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Catenovulum;s__Catenovulum agarivorans;t__Catenovulum agarivorans YM01 0 0 7 3 2 0 0 100226 100238 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia ruminantium;t__Ehrlichia ruminantium str. Welgevonden 0 0 0 0 0 17 0 30310 30327 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Jejuia;s__Jejuia pallidilutea;t__ 0 0 0 0 39 0 0 75286 75325 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfarculales;f__Desulfarculaceae;g__Dethiosulfatarculus;s__Dethiosulfatarculus sandiegensis;t__ 0 0 1 0 0 0 0 118529 118530 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Eudoraea;s__Eudoraea adriatica;t__Eudoraea adriatica DSM 19308 0 0 0 0 13 0 0 78002 78015 k__Bacteria;p__Bacteroidetes;c__;o__;f__;g__;s__Bacteroidetes oral taxon 274;t__Bacteroidetes oral taxon 274 str. F0058 5 23 0 0 0 0 0 42043 42071 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter typhlonius;t__ 0 0 1 7 4 978 0 37426 38416 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Chrysochromulina ericina virus;t__ 0 0 0 0 0 0 0 9471 9471 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Culex quinquefasciatus;t__Wolbachia endosymbiont of Culex quinquefasciatus Pel 0 0 0 0 0 0 0 29645 29645 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus haemoperoxidus;t__Enterococcus haemoperoxidus ATCC BAA-382 0 0 7 15 1 139 0 71409 71571 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Orientia;s__Orientia tsutsugamushi;t__Orientia tsutsugamushi str. Boryong 0 0 0 0 0 0 0 42541 42541 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Microscillaceae;g__Microscilla;s__Microscilla marina;t__Microscilla marina ATCC 23134 17 0 0 0 0 0 0 195150 195167 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter antarcticus;t__Pedobacter antarcticus 4BY 0 212 0 0 207 14 0 90663 91096 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halobacteroidaceae;g__Halobacteroides;s__Halobacteroides halobius;t__Halobacteroides halobius DSM 5150 0 0 0 0 0 0 0 52985 52985 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylocapsa;s__Methylocapsa aurea;t__ 0 0 1 12 19 31 0 79288 79351 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cecembensis;t__ 3 1 1 30 13 14 0 94884 94960 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Wigglesworthia;s__Wigglesworthia glossinidia;t__Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 0 0 1 3 0 0 0 13950 13954 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridescent virus 30;t__ 0 0 0 0 0 234 0 3736 3970 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AB2028;t__ 0 9 0 1 53 24 0 69386 69473 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Tolypothrichaceae;g__Tolypothrix;s__Tolypothrix campylonemoides;t__Tolypothrix campylonemoides VB511288 94 0 6 95 0 0 0 187237 187432 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella adelaidensis;t__ 0 0 5 0 1 25 0 47229 47260 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira noguchii;t__Leptospira noguchii serovar Panama 1 0 0 0 0 341 0 93815 94157 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina;s__Aquimarina agarilytica;t__Aquimarina agarilytica ZC1 13 0 0 0 49 41 0 84715 84818 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella burgdorferi;t__Borrelia burgdorferi B31 0 0 0 0 0 0 0 18214 18214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Xestia c-nigrum granulovirus;t__ 0 0 0 0 0 0 0 3574 3574 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome RW-C;t__ 0 0 0 0 0 0 0 36 36 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira kirschneri;t__Leptospira kirschneri serovar Valbuzzi 0 0 0 0 0 108 0 86201 86309 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella scopos;t__Prevotella scopos JCM 17725 0 1 1 0 0 228 0 65619 65849 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Dysgonomonas;s__Dysgonomonas mossii;t__Dysgonomonas mossii DSM 22836 0 0 0 9 0 27 0 78918 78954 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter;s__Polaribacter sp. Hel1_33_49;t__ 0 0 0 0 32 91 0 60128 60251 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas balearica;t__Pseudomonas balearica DSM 6083 0 17 11 0 0 61 0 87074 87163 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chloroherpeton;s__Chloroherpeton thalassium;t__Chloroherpeton thalassium ATCC 35110 0 0 0 0 0 0 0 65869 65869 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus thermoruber;t__Brevibacillus thermoruber 423 0 129 1 13 6 64 0 88401 88614 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caloranaerobacter;s__Caloranaerobacter azorensis;t__Caloranaerobacter azorensis H53214 0 2 0 1 7 27 0 48125 48162 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;s__Leptotrichia buccalis;t__Leptotrichia buccalis C-1013-b 3 0 0 0 0 64 0 49245 49312 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia canis;t__Ehrlichia canis str. Jake 0 0 0 0 0 148 0 26152 26300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__BeAn 58058 virus;t__ 0 0 0 0 0 3 0 3257 3260 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum hydrothermale;t__Desulfotomaculum hydrothermale Lam5 = DSM 18033 0 8 54 0 0 10 0 53740 53812 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter millerae;t__ 0 0 0 0 0 0 0 50870 50870 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium maltaromaticum;t__Carnobacterium maltaromaticum LMA28 0 0 63 42 0 0 0 72672 73008 k__Bacteria;p__Verrucomicrobia;c__Methylacidiphilae;o__Methylacidiphilales;f__Methylacidiphilaceae;g__Methylacidiphilum;s__Methylacidiphilum kamchatkense;t__Methylacidiphilum kamchatkense Kam1 0 0 0 0 0 0 0 44133 44133 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Calyptogena okutanii thioautotrophic gill symbiont;t__Candidatus Vesicomyosocius okutanii HA 0 0 1 0 13 0 0 20429 20443 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Waddliaceae;g__Waddlia;s__Waddlia chondrophila;t__Waddlia chondrophila WSU 86-1044 0 0 2 0 0 0 0 42324 42326 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter;s__Algibacter lectus;t__ 0 0 0 0 76 5 0 93660 93741 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus didelphis;t__Streptococcus didelphis DSM 15616 0 0 1 2 0 103 0 37400 37506 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella worsleiensis;t__ 0 0 6 0 0 25 0 61161 61192 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina;s__Aquimarina macrocephali;t__Aquimarina macrocephali JAMB N27 6 1 1 0 19 21 0 120761 120809 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria floridensis;t__Listeria floridensis FSL S10-1187 1 0 6 9 0 49 0 55654 55719 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma pulmonis;t__Mycoplasma pulmonis UAB CTIP 0 0 0 0 0 2 0 19275 19277 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptostreptococcus;s__Peptostreptococcus anaerobius;t__Peptostreptococcus anaerobius VPI 4330 = DSM 2949 3 379 0 96 39 27 0 41445 41989 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Oribacterium;s__Oribacterium sp. P6A1;t__ 0 1 0 1 67 0 0 73698 73767 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__;s__alpha proteobacterium HIMB59;t__ 0 0 0 0 0 0 0 28202 28202 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus timonensis;t__Peptoniphilus timonensis JC401 0 62 1 0 36 150 0 34098 34347 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix;s__Lacinutrix himadriensis;t__ 3 0 0 1 34 34 0 83198 83270 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Roseolovirus;s__Human betaherpesvirus 6A;t__ 0 0 0 0 10 48 0 3128 3186 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Thermoanaerobacterium;s__Thermoanaerobacterium xylanolyticum;t__Thermoanaerobacterium xylanolyticum LX-11 0 12 0 0 0 0 0 50675 50687 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia avium;t__Chlamydia avium 10DC88 0 0 0 0 0 47 0 20774 20821 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium C6A11;t__ 0 0 0 0 2 0 0 57862 57864 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter wolinii;t__Methanobrevibacter wolinii SH 0 0 0 0 0 4 0 40703 40707 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus gorillae;t__ 0 1 0 7 2 42 0 124792 124845 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Arsenophonus;s__Arsenophonus nasoniae;t__Arsenophonus nasoniae DSM 15247 0 0 1 14 1 0 0 72720 72736 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium fredii;t__Sinorhizobium fredii NGR234 0 0 0 6 19 421 0 78068 78514 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium rhizogenes;t__Rhizobium rhizogenes NBRC 13257 0 1 0 4 78 5 0 140703 140791 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Mucispirillum;s__Mucispirillum schaedleri;t__Mucispirillum schaedleri ASF457 12 0 0 0 0 0 0 46299 46311 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium mortiferum;t__Fusobacterium mortiferum ATCC 9817 0 0 0 0 5 16 0 53248 53269 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Acyrthosiphon pisum) 0 0 3 1 0 0 0 12809 12813 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus ehimensis;t__Paenibacillus ehimensis A2 0 0 0 1 1 8 0 152657 152667 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Milkweed yellows phytoplasma;t__Milkweed yellows phytoplasma str. MW1 0 0 0 0 0 247 0 11130 11377 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens;s__Nonlabens ulvanivorans;t__ 0 0 0 0 11 9 0 64095 64115 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma glycophilum;t__Mycoplasma glycophilum ATCC 35277 0 0 0 0 0 4 0 17800 17804 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Blochmannia;s__Candidatus Blochmannia vafer;t__Candidatus Blochmannia vafer str. BVAF 0 0 2 1 1 1 0 14446 14451 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas luteoviolacea;t__ 0 0 45 3 0 0 0 124429 124477 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Liberibacter;s__Candidatus Liberibacter solanacearum;t__Candidatus Liberibacter solanacearum CLso-ZC1 0 0 1 0 0 53 0 25111 25165 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__;f__;g__;s__Flavobacteria bacterium MS024-2A;t__ 0 1 17 0 0 0 0 38061 38079 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Crocinitomicaceae;g__Crocinitomix;s__Crocinitomix catalasitica;t__Crocinitomix catalasitica ATCC 23190 0 1 0 2 0 0 0 92238 92241 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella israelensis;t__ 0 0 2 0 0 37 0 60687 60726 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium aquatile;t__Flavobacterium aquatile LMG 4008 0 0 0 0 7 26 0 69772 69805 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus agalactiae;t__Streptococcus agalactiae serogroup V 5 330 90 23 0 743 0 42013 43205 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Honeysuckle yellow vein mosaic disease associated satellite DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Yatapoxvirus;s__Tanapox virus;t__Yaba-like disease virus 0 0 0 0 0 0 0 2891 2891 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium frigoris;t__Flavobacterium frigoris PS1 0 0 0 0 5 18 0 78557 78580 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium cellulovorans;t__Clostridium cellulovorans 743B 0 0 0 57 15 72 0 105100 105244 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Bergeyella;s__Bergeyella zoohelcum;t__Bergeyella zoohelcum ATCC 43767 0 9 0 0 170 0 0 45941 46120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Columbid alphaherpesvirus 1;t__ 0 0 0 0 0 10 0 4074 4084 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Acetobacterium;s__Acetobacterium bakii;t__ 0 0 0 0 0 0 0 82504 82504 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum alcoholivorax;t__Desulfotomaculum alcoholivorax DSM 16058 0 1 1 0 0 6 0 69186 69194 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus rubiinfantis;t__ 1 158 19 37 49 518 0 85351 86133 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella tamiae;t__Bartonella tamiae Th307 0 1 2 35 0 0 0 44845 44883 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax borkumensis;t__Alcanivorax borkumensis SK2 0 0 41 6 0 27 0 62328 62402 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter cinaedi;t__Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 0 0 2 23 5 743 0 44029 44802 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas;s__Mangrovimonas sp. ST2L15;t__ 0 0 0 0 47 10 0 70973 71030 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Tatumella;s__Tatumella morbirosei;t__ 0 4 27 207 119 0 0 87788 88145 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Pelodictyon;s__Pelodictyon luteolum;t__Chlorobium luteolum DSM 273 0 0 0 0 26 0 0 47270 47296 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Kordia;s__Kordia algicida;t__Kordia algicida OT-1 0 1 1 1 51 17 0 100260 100331 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium albertimagni;t__Agrobacterium albertimagni AOL15 0 0 0 3 39 6 0 101553 101601 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides;s__Parabacteroides distasonis;t__Parabacteroides distasonis ATCC 8503 0 4 0 85 0 23 0 96115 96227 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Cobetia;s__Cobetia crustatorum;t__ 0 0 7 2 10 0 0 80718 80737 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria arctica;t__ 8 0 1 1 3 23 0 47395 47431 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio aminophilus;t__Desulfovibrio aminophilus DSM 12254 0 0 0 1 0 3 0 68224 68228 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus pabuli;t__Paenibacillus pabuli NBRC 13638 0 0 0 18 0 29 0 146413 146460 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Nitrincola;s__Nitrincola sp. A-D6;t__ 0 2 24 0 6 13 0 75654 75699 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus brevis;t__Lactobacillus brevis ATCC 367 0 0 11 4 1 540 0 45268 45824 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas sp. S9;t__ 0 0 1 0 0 282 0 95600 95883 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella senegalensis;t__Bartonella senegalensis OS02 1 0 2 11 0 14 0 38920 38948 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophaceae;g__Desulfobacca;s__Desulfobacca acetoxidans;t__Desulfobacca acetoxidans DSM 11109 0 1 0 0 0 0 0 65649 65650 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__;s__[Bacillus] aminovorans;t__ 1 0 3 74 10 0 0 80661 80749 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus akibai;t__Bacillus akibai JCM 9157 0 0 2 4 2 541 0 93988 94537 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Bernardetiaceae;g__Hugenholtzia;s__Hugenholtzia roseola;t__Hugenholtzia roseola DSM 9546 0 0 0 0 0 0 0 84382 84382 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__Succinimonas;s__Succinimonas amylolytica;t__Succinimonas amylolytica DSM 2873 0 4 7 0 124 0 0 71749 71884 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Bizionia;s__Bizionia argentinensis;t__Bizionia argentinensis JUB59 0 0 0 0 16 0 0 65443 65459 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;s__Leptotrichia shahii;t__Leptotrichia shahii DSM 19757 34 0 0 1 0 992 0 41806 42833 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium undae;t__ 0 0 1 7 0 3 0 65190 65201 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides reticulotermitis;t__Bacteroides reticulotermitis JCM 10512 0 0 0 4 0 158 0 106961 107123 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium beijerinckii;t__ 0 0 0 0 9 969 0 128729 129707 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Persicobacteraceae;g__Persicobacter;s__Persicobacter sp. JZB09;t__ 0 0 0 0 0 0 0 86693 89473 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus oceanisediminis;t__Bacillus oceanisediminis 2691 0 0 26 30 92 378 0 108708 109234 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus henryi;t__Streptococcus henryi DSM 19005 0 2 1 6 0 80 0 48294 48383 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Sediminibacillus;s__Sediminibacillus halophilus;t__Sediminibacillus halophilus NSP9.3 0 0 2 0 17 0 0 79611 79630 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fluorescens;t__ 0 0 4 0 0 145 0 123359 123508 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium ferrooxidans;t__Chlorobium ferrooxidans DSM 13031 0 0 0 0 0 0 0 50694 50694 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium filum;t__Flavobacterium filum DSM 17961 0 0 0 0 51 23 0 63602 63676 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus aurantiacus;t__Bacillus aurantiacus DSM 18675 0 1 1 3 3 3 0 80411 80422 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus harei;t__Peptoniphilus harei ACS-146-V-Sch2b 13 352 1 0 46 242 0 36009 36663 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter uraniireducens;t__Geobacter uraniireducens Rf4 0 1 2 3 0 61 0 102659 102727 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter litoralis;t__Roseobacter litoralis Och 149 0 0 1 0 28 174 0 89901 90104 k__Bacteria;p__Chloroflexi;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Anaerolinea;s__Anaerolinea thermophila;t__Anaerolinea thermophila UNI-1 0 0 0 0 0 0 0 70647 70647 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__Succinivibrio;s__Succinivibrio dextrinosolvens;t__Succinivibrio dextrinosolvens H5 0 0 0 0 0 0 0 53242 53242 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus casseliflavus;t__Enterococcus casseliflavus EC20 0 0 8 7 1 251 0 68278 68545 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus garvieae;t__Lactococcus garvieae Lg2 4 1 13 14 17 0 0 38430 39279 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Beggiatoa;s__Beggiatoa alba;t__Beggiatoa alba B18LD 0 1 2 0 0 0 0 85230 85233 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas ushuaiensis;t__Marinomonas ushuaiensis DSM 15871 0 0 6 0 1 47 0 66716 66770 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga cynodegmi;t__Capnocytophaga cynodegmi DSM 19736 0 0 0 0 9 634 0 52413 53056 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfocapsa;s__Desulfocapsa sulfexigens;t__Desulfocapsa sulfexigens DSM 10523 0 0 4 1 20 0 0 79710 79735 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Kosmotogales;f__Kosmotogaceae;g__Kosmotoga;s__Kosmotoga olearia;t__Kosmotoga olearia TBF 19.5.1 0 0 0 0 0 0 0 46042 46042 k__Bacteria;p__Verrucomicrobia;c__Methylacidiphilae;o__Methylacidiphilales;f__Methylacidiphilaceae;g__Methylacidiphilum;s__Methylacidiphilum infernorum;t__Methylacidiphilum infernorum V4 1 0 0 0 0 0 0 45741 45742 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCP26F;t__ 0 0 0 0 0 588 0 195 783 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria aquatica;t__Listeria aquatica FSL S10-1188 0 0 7 8 0 29 0 51923 51967 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus alimentarius;t__Lactobacillus alimentarius DSM 20249 0 1 1 2 7 222 0 46381 46618 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blattella germanica);t__Blattabacterium sp. (Blattella germanica) str. Bge 0 0 0 0 0 0 0 12736 12736 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium neonatale;t__ 0 0 0 0 0 60 0 94118 94178 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema putidum;t__ 7 0 0 0 0 477 0 55454 55938 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus coagulans;t__Bacillus coagulans DSM 1 = ATCC 7050 2 2 15 39 242 86 0 66953 67339 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium sp. 3_1_31;t__ 0 239 0 894 0 130 0 59974 61237 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tamlana;s__Tamlana nanhaiensis;t__ 0 0 0 0 23 0 0 80328 80351 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polydnaviridae;o__;f__;g__Ichnovirus;s__Hyposoter fugitivus ichnovirus;t__ 0 0 0 0 0 0 0 4816 4816 k__Bacteria;p__Chrysiogenetes;c__Chrysiogenetes;o__Chrysiogenales;f__Chrysiogenaceae;g__Desulfurispirillum;s__Desulfurispirillum indicum;t__Desulfurispirillum indicum S5 160 0 0 0 0 0 0 58407 58567 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thioautotrophicum;t__ 0 0 1 0 0 2 0 92447 92450 k__Bacteria;p__;c__;o__;f__;g__;s__bacterium LF-3;t__ 598 0 0 0 0 0 0 58002 58600 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P12002virus;s__Polaribacter virus P12002L;t__Polaribacter phage P12002L 0 0 0 0 0 682 0 291 973 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Robiginitalea;s__Robiginitalea biformata;t__Robiginitalea biformata HTCC2501 0 0 0 0 19 0 0 70588 70607 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;t__Indibacter alkaliphilus LW1 3 2 0 2 126 0 0 100475 100608 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Kamptonema;s__Kamptonema formosum;t__Kamptonema formosum PCC 6407 1 0 4 14 1 0 0 137446 137466 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira;s__Brachyspira murdochii;t__Brachyspira murdochii DSM 12563 0 0 0 0 0 74 0 64761 64836 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Riemerella;s__Riemerella columbina;t__Riemerella columbina DSM 16469 0 969 0 0 66 4 0 47547 48586 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Simkaniaceae;g__Simkania;s__Simkania negevensis;t__Simkania negevensis Z 0 0 0 0 0 0 0 49925 49925 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Hapalosiphonaceae;g__Mastigocoleus;s__Mastigocoleus testarum;t__Mastigocoleus testarum BC008 0 0 0 0 0 0 0 253667 253667 k__Bacteria;p__Cyanobacteria;c__;o__Pleurocapsales;f__Dermocarpellaceae;g__Stanieria;s__Stanieria cyanosphaera;t__Stanieria cyanosphaera PCC 7437 0 0 17 1 0 0 0 100806 100824 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium profundum;t__Photobacterium profundum SS9 0 0 145 0 230 53 0 126033 126461 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. ATCC 51142;t__ 0 0 46 0 0 7 0 107224 107277 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus sp. MIT 0601;t__ 0 0 1 1 0 10 0 34125 34137 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Cyprinivirus;s__Anguillid herpesvirus 1;t__ 0 0 0 0 0 0 0 4970 4970 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus pantothenticus;t__ 0 0 1 1 33 41 0 94710 94786 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gillisia;s__Gillisia limnaea;t__Gillisia limnaea DSM 15749 0 0 0 0 26 0 0 79184 79210 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio salmonicida;t__Aliivibrio salmonicida LFI1238 0 0 41 0 302 0 0 90287 90630 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter;s__Polynucleobacter asymbioticus;t__Polynucleobacter asymbioticus QLW-P1DMWA-1 0 0 0 10 3 51 0 43125 43189 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Candidatus Paracaedibacteraceae;g__Candidatus Paracaedibacter;s__Candidatus Paracaedibacter symbiosus;t__ 0 33 2 0 5 0 0 51368 51408 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Polyangiaceae;g__Chondromyces;s__Chondromyces crocatus;t__ 0 0 0 0 45 15 0 227702 227762 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Dorea;s__Dorea longicatena;t__Dorea longicatena DSM 13814 9 34 0 646 1031 32 0 56428 58180 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas salmonicida;t__Aeromonas salmonicida subsp. salmonicida 0 0 8 0 0 0 0 5991 6755 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanococcus;s__Methanococcus vannielii;t__Methanococcus vannielii SB 0 0 0 0 0 8 0 34392 34400 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas sp. TTU2014-080ASC;t__ 1 0 5 0 1 72 0 90344 90423 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Olleya;s__Olleya marilimosa;t__Olleya marilimosa CAM030 0 1 0 0 585 0 0 66228 66814 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Salinicoccus;s__Salinicoccus sp. YB14-2;t__ 3 0 10 63 209 58 0 52815 53158 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium gelidilacus;t__Flavobacterium gelidilacus DSM 15343 0 0 0 0 4 20 0 68675 68699 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium antarcticum;t__Flavobacterium antarcticum DSM 19726 0 0 0 0 5 35 0 61485 61525 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella doshiae;t__Bartonella doshiae NCTC 12862 = ATCC 700133 0 0 2 30 0 309 0 35567 35908 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter daltonii;t__Geobacter daltonii FRC-32 0 0 4 0 0 21 0 86065 86090 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylobacter;s__Methylobacter tundripaludum;t__Methylobacter tundripaludum SV96 0 0 20 0 2 0 0 96885 96907 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio litoralis;t__Vibrio litoralis DSM 17657 0 0 18 0 1 30 0 76377 76426 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum;s__Tenacibaculum ovolyticum;t__Tenacibaculum ovolyticum DSM 18103 0 0 0 0 10 10 0 82353 82373 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Glaciecola;s__Glaciecola pallidula;t__Glaciecola pallidula DSM 14239 = ACAM 615 0 0 6 4 4 45 0 87070 87129 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio fructosivorans;t__Desulfovibrio fructosivorans JJ 0 0 0 0 0 21 0 93310 93331 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanicola;s__Oceanicola sp. HL-35;t__ 0 0 1 0 38 0 0 86158 86197 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Phaseolibacter;s__Phaseolibacter flectens;t__Phaseolibacter flectens ATCC 12775 0 0 3 16 4 0 0 54828 54851 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio genomosp. F6;t__Vibrio genomosp. F6 str. FF-238 0 0 2 0 5 102 0 84041 84150 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia persicina;t__Erwinia persicina NBRC 102418 0 0 2 31 0 0 0 97960 97993 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cvm10virus;s__Escherichia virus ep3;t__Escherichia phage vB_EcoM-ep3 0 0 0 0 0 0 0 847 847 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfurivibrio;s__Desulfurivibrio alkaliphilus;t__Desulfurivibrio alkaliphilus AHT 2 0 1 4 0 1 0 0 61949 61955 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Thermoactinomyces;s__Thermoactinomyces vulgaris;t__ 59 0 0 2 3 0 0 72067 72131 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Candidatus Brocadiales;f__Candidatus Brocadiaceae;g__Candidatus Brocadia;s__Candidatus Brocadia sinica;t__Candidatus Brocadia sinica JPN1 0 0 0 0 0 0 0 81536 81536 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium succinicans;t__Flavobacterium succinicans LMG 10402 109 0 0 0 5 40 0 72813 72967 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfobulbus;s__Desulfobulbus mediterraneus;t__Desulfobulbus mediterraneus DSM 13871 0 0 0 0 0 0 0 95542 95542 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter lignolyticus;t__Enterobacter lignolyticus SCF1 2 11 24 188 526 54 0 95475 96280 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus circulans;t__Bacillus circulans NBRC 13626 0 0 2 2 6 10 0 101815 101835 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Coxiella;s__Coxiella burnetii;t__Coxiella burnetii Dugway 5J108-111 0 0 0 0 9 0 0 43166 43175 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium akiainvivens;t__ 0 8 0 0 45 62 0 90470 90585 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Pseudobacteroides;s__Pseudobacteroides cellulosolvens;t__Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933 0 4 0 231 1165 0 0 136176 137576 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira santarosai;t__Leptospira santarosai serovar Shermani 0 0 0 0 0 233 0 79437 79670 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Providencia;s__Providencia stuartii;t__Providencia stuartii MRSN 2154 25 0 132 149 14 151 0 87571 88042 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacterium;s__Desulfobacterium autotrophicum;t__Desulfobacterium autotrophicum HRM2 0 1 7 0 18 0 0 111755 111781 k__Bacteria;p__Verrucomicrobia;c__Opitutae;o__Puniceicoccales;f__Puniceicoccaceae;g__Coraliomargarita;s__Coraliomargarita akajimensis;t__Coraliomargarita akajimensis DSM 45221 0 1 0 0 0 0 0 75014 75015 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Oceanospirillum;s__Oceanospirillum maris;t__Oceanospirillum maris DSM 6286 0 0 1 1 1 0 0 74031 74034 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus macerans;t__ 0 1 0 14 2 340 0 146159 146516 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Merismopediaceae;g__Synechocystis;s__Synechocystis sp. PCC 7509;t__ 0 0 18 2 0 3 0 98132 98155 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia andropogonis;t__ 0 13 2 6 16 3 0 123513 123553 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Achromobacter;s__Achromobacter denitrificans;t__Achromobacter denitrificans NBRC 15125 0 0 1 9 12 175 0 133624 133821 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia oleae;t__ 0 1 25 119 118 1076 0 93208 94547 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Paraglaciecola;s__Paraglaciecola psychrophila;t__Paraglaciecola psychrophila 170 1 0 41 56 42 0 0 108133 108273 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Actinobacillus;s__Actinobacillus succinogenes;t__Actinobacillus succinogenes 130Z 0 0 42 0 50 25 0 46276 46393 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Rouxiella;s__Rouxiella chamberiensis;t__ 2 0 18 44 67 0 0 92583 92714 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chromobacterium;s__Chromobacterium piscinae;t__ 0 0 3 4 10 302 0 81051 81370 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Archangiaceae;g__Archangium;s__Archangium gephyra;t__ 1 0 0 41 108 0 0 249638 249788 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfonatronospira;s__Desulfonatronospira thiodismutans;t__Desulfonatronospira thiodismutans ASO3-1 0 0 0 0 214 0 0 81921 82135 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella holmesii;t__Bordetella holmesii ATCC 51541 0 0 2 20 48 45 0 73878 73993 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Leptospirillum;s__Leptospirillum ferrooxidans;t__Leptospirillum ferrooxidans C2-3 0 0 0 0 0 0 0 51190 51190 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;t__Salmonella enterica subsp. enterica 4 4 35 111 707 0 0 96172 97148 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Atlantibacter;s__Atlantibacter hermannii;t__Atlantibacter hermannii NBRC 105704 2 3 5 34 526 0 0 89255 89825 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Joostella;s__Joostella marina;t__Joostella marina DSM 19592 1 3 1 0 1521 0 0 88633 90159 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus flexus;t__Bacillus flexus NBRC 15715 0 0 2 1 5 8 0 77619 77635 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus caeni;t__ 0 0 2 12 193 44 0 70939 71190 k__Bacteria;p__Bacteroidetes;c__Saprospiria;o__Saprospirales;f__Haliscomenobacteraceae;g__Haliscomenobacter;s__Haliscomenobacter hydrossis;t__Haliscomenobacter hydrossis DSM 1100 0 3 0 3 0 0 0 167427 167433 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Leadbetterella;s__Leadbetterella byssophila;t__Leadbetterella byssophila DSM 17132 0 5 0 2 4 0 0 81182 81193 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Aneurinibacillus;s__Aneurinibacillus migulanus;t__ 1 0 4 12 6 0 0 126488 126511 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus dielmoensis;t__ 0 0 3 1 4 57 0 90892 90957 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pseudopedobacter;s__Pseudopedobacter saltans;t__Pseudopedobacter saltans DSM 12145 0 59 0 0 33 0 0 92612 92704 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea septica;t__ 0 2 4 71 20 84 0 90709 90890 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chromobacterium;s__Chromobacterium haemolyticum;t__Chromobacterium haemolyticum DSM 19808 0 0 1 0 3 28 0 100430 100462 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium polytrichastri;t__ 0 0 0 0 0 83 0 102574 102657 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__;s__Megavirus chiliensis;t__ 0 0 0 0 0 0 0 25176 25176 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kosakonia;s__Kosakonia sacchari;t__Kosakonia sacchari SP1 1 11 24 117 598 0 0 97289 98040 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium sp. HMSC13C05;t__ 0 0 0 0 0 0 0 116410 116410 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella taylorii;t__Bartonella taylorii 8TBB 0 0 2 18 0 784 0 37431 38235 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter;s__Polaribacter irgensii;t__Polaribacter irgensii 23-P 0 0 0 0 21 43 0 54834 54898 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Saccharospirillaceae;g__Gynuella;s__Gynuella sunshinyii;t__Gynuella sunshinyii YC6258 0 1 39 21 0 0 0 129458 129519 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__;g__Solirubrum;s__Solirubrum puertoriconensis;t__ 0 0 0 14 0 0 0 96066 96080 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium kishitanii;t__ 0 0 8 0 16 52 0 93898 93974 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mesonia;s__Mesonia mobilis;t__Mesonia mobilis DSM 19841 0 24 0 0 290 0 0 63570 63884 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroflexus;s__Psychroflexus gondwanensis;t__Psychroflexus gondwanensis ACAM 44 0 0 0 0 37 522 0 65561 66120 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-18019;t__ 0 0 0 78 2 0 0 127966 128046 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Myroides;s__Myroides injenensis;t__Myroides injenensis M09-0166 0 0 1 0 24 0 0 68716 68741 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter nitrofigilis;t__Arcobacter nitrofigilis DSM 7299 0 0 14 3 5 46 0 63776 63844 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Mucilaginibacter;s__Mucilaginibacter paludis;t__Mucilaginibacter paludis DSM 18603 0 1 0 0 9 0 0 168127 168142 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella nanceiensis;t__Prevotella nanceiensis DSM 19126 = JCM 15639 0 0 0 1 2 371 0 52575 52949 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Salinivirgaceae;g__Salinivirga;s__Salinivirga cyanobacteriivorans;t__ 0 1 0 0 0 0 0 96246 96247 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planococcus;s__Planococcus sp. CAU13;t__ 0 0 1 12 1 17 0 65512 65543 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sp. 83;t__ 0 1 1 0 30 256 0 75524 75812 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus mannanilyticus;t__Bacillus mannanilyticus JCM 10596 0 0 2 5 2 15 0 90465 90489 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Merismopediaceae;g__Synechocystis;s__Synechocystis sp. PCC 6803;t__ 0 0 6 0 0 0 0 71463 71469 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus borstelensis;t__Brevibacillus borstelensis AK1 0 0 0 5 14 36 0 102994 103049 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] glycyrrhizinilyticum;t__[Clostridium] glycyrrhizinilyticum JCM 13369 0 1 0 0 43 0 0 64144 64188 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Kordia;s__Kordia jejudonensis;t__ 7 0 1 0 31 45 0 106635 106719 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium divergens;t__Carnobacterium divergens DSM 20623 0 0 36 60 0 193 0 52095 52384 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus dispar;t__Enterococcus dispar ATCC 51266 0 1 8 107 1 313 0 55628 56058 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter pittii;t__Acinetobacter pittii PHEA-2 7 1 1 0 3 799 0 76439 77250 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Gardnerella;s__Gardnerella vaginalis;t__Gardnerella vaginalis ATCC 14019 15 9 4 0 11 0 63 33244 33346 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flaviramulus;s__Flaviramulus ichthyoenteri;t__Flaviramulus ichthyoenteri Th78 0 0 0 3 108 0 0 78856 78967 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella multiformis;t__Prevotella multiformis DSM 16608 0 1 0 138 6 1510 0 58900 60555 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria gonorrhoeae;t__Neisseria gonorrhoeae FA 1090 5 6 1 0 20 1544 0 41502 43078 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Pelistega;s__Pelistega indica;t__ 4 36 6 5 121 0 0 49649 49821 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus marisflavi;t__ 0 0 3 0 4 18 0 86194 86219 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Paludibacterium;s__Paludibacterium yongneupense;t__Paludibacterium yongneupense DSM 18731 0 0 4 1 6 0 0 86418 86429 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Rheinheimera;s__Rheinheimera baltica;t__Rheinheimera baltica DSM 14885 0 0 24 0 0 4 0 86706 86734 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__[Eubacterium] cellulosolvens;t__[Eubacterium] cellulosolvens 6 1 3 0 160 0 4 0 67489 67657 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea rwandensis;t__ 0 1 20 309 72 180 0 85970 86552 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Leeuwenhoekiella;s__Leeuwenhoekiella blandensis;t__Leeuwenhoekiella blandensis MED217 0 1 0 0 1709 0 0 83026 84736 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Gracilibacillus;s__Gracilibacillus lacisalsi;t__Gracilibacillus lacisalsi DSM 19029 0 0 1 0 9 12 0 88053 88075 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella bronchiseptica;t__Bordetella bronchiseptica 253 0 2 1 18 106 20957 0 84203 105287 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus subterraneus;t__ 23 0 2 1 100 1396 0 67952 69488 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium colicanis;t__Clostridium colicanis 209318 0 0 0 0 0 47 0 68929 68976 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas phenolica;t__ 0 0 38 1 0 238 0 97101 97378 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas ruminantium;t__Selenomonas ruminantium AB3002 0 24 16 0 51 10 0 73204 73305 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas hengshuiensis;t__ 0 0 0 0 2 21 0 103807 103830 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Halothiobacillaceae;g__Halothiobacillus;s__Halothiobacillus sp. XI15;t__ 0 0 6 0 0 0 0 45819 45825 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mesoflavibacter;s__Mesoflavibacter zeaxanthinifaciens;t__Mesoflavibacter zeaxanthinifaciens DSM 18436 0 0 3 0 287 0 0 58978 59268 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Thalassomonas;s__Thalassomonas actiniarum;t__ 0 0 3 1 0 0 0 148159 148163 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia pickettii;t__Ralstonia pickettii 12J 6 2 5 467 35 154 0 104225 104894 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus pinihumi;t__Paenibacillus pinihumi DSM 23905 = JCM 16419 0 0 0 3 0 24 0 134944 134971 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella denitrificans;t__Shewanella denitrificans OS217 0 0 80 14 0 310 0 90514 90918 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Agarivorans;s__Agarivorans albus;t__Agarivorans albus MKT 106 0 0 9 4 0 0 0 94546 94559 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga;s__Cellulophaga sp. Hel_I_12;t__ 0 0 0 0 37 0 0 80585 80622 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Catellicoccus;s__Catellicoccus marimammalium;t__Catellicoccus marimammalium M35/04/3 2 1 3 7 14 0 0 25641 25668 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus floricola;t__Lactobacillus floricola DSM 23037 = JCM 16512 0 0 2 4 0 12 0 25719 25737 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus equi;t__Streptococcus equi subsp. zooepidemicus 1 71 0 18 0 135 0 42772 42997 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Tannerella;s__Tannerella forsythia;t__Tannerella forsythia 92A2 25 55 2 182 78 0 0 67768 68110 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes obesi;t__ 0 2 0 1050 0 967 0 60562 62581 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cellulosilyticus;t__Bacillus cellulosilyticus DSM 2522 0 6 2 62 33 61 0 93469 93633 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia enterocolitica;t__Yersinia enterocolitica subsp. enterocolitica 1 0 28 260 164 0 0 91864 92317 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia timonae;t__ 0 0 30 102 12 119 0 119122 119385 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophorhabdaceae;g__Syntrophorhabdus;s__Syntrophorhabdus aromaticivorans;t__Syntrophorhabdus aromaticivorans UI 0 0 2 0 0 0 0 74924 74926 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Halobacteriovoraceae;g__Halobacteriovorax;s__Halobacteriovorax marinus;t__Halobacteriovorax marinus SJ 0 0 0 4 0 0 0 68714 68718 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter enzymogenes;t__ 0 0 0 0 41 0 0 122738 122779 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas nitritireducens;t__ 0 3 1 0 21 207 0 90602 90834 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea sp. IMH;t__ 0 13 21 232 189 110 0 81245 81810 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum seropedicae;t__ 0 0 12 23 49 97 0 110013 110194 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina sp. MTP4;t__ 0 0 0 0 0 13 0 84216 84229 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter dokdonensis;t__Lysobacter dokdonensis DS-58 0 0 2 2 46 13 0 65377 65440 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Spirosoma;s__Spirosoma luteum;t__Spirosoma luteum DSM 19990 0 0 0 0 1 2 0 132022 132025 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacter;s__Desulfobacter curvatus;t__Desulfobacter curvatus DSM 3379 0 0 0 0 2 49 0 112238 112289 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus subsp. pastoris 0 0 1 0 0 0 101 33057 33159 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus thermoleovorans;t__ 0 0 7 0 22 0 0 68983 69012 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__endosymbiont of unidentified scaly snail isolate Monju;t__ 3 1 5 0 0 0 0 51946 51955 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium phaeobacteroides;t__Chlorobium phaeobacteroides DSM 266 0 0 0 0 174 114 0 62390 62678 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium limicola;t__Chlorobium limicola DSM 245 4 0 0 0 26 39 0 55194 55263 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Croceitalea;s__Croceitalea dokdonensis;t__Croceitalea dokdonensis DOKDO 023 1 0 0 0 49 0 0 77599 77649 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira alstonii;t__Leptospira alstonii serovar Sichuan 0 0 0 0 1 193 0 88300 88494 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfotignum;s__Desulfotignum balticum;t__Desulfotignum balticum DSM 7044 0 0 1 0 24 0 0 102342 102367 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus plakortidis;t__ 0 0 2 0 3 3 0 79245 79253 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__Cafeteriavirus;s__Cafeteria roenbergensis virus;t__Cafeteria roenbergensis virus BV-PW1 0 0 0 0 0 0 0 12349 12349 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium damselae;t__Photobacterium damselae subsp. damselae 0 6 83 0 184 171 0 100466 100910 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus manganicus;t__Lysinibacillus manganicus DSM 26584 51 0 0 1 1 1 0 80739 80793 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Halothiobacillaceae;g__Halothiobacillus;s__Halothiobacillus neapolitanus;t__Halothiobacillus neapolitanus c2 0 1 3 2 0 4 0 51647 51657 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus vireti;t__Bacillus vireti LMG 21834 10 6 2 5 6 89 0 105105 105246 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus italicus;t__Enterococcus italicus DSM 15952 0 0 1 43 0 442 0 45387 45874 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinilabiliaceae;g__Marinilabilia;s__Marinilabilia salmonicolor;t__Marinilabilia salmonicolor JCM 21150 0 2 0 0 9 0 0 99501 99512 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Paenisporosarcina;s__Paenisporosarcina sp. TG20;t__ 0 0 2 11 12 6 0 81584 81615 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium seoulense;t__ 0 0 0 0 5 44 0 75697 75746 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Anaeroglobus;s__Anaeroglobus geminatus;t__Anaeroglobus geminatus F0357 0 0 0 0 0 0 0 35691 35691 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Weeksella;s__Weeksella virosa;t__Weeksella virosa DSM 16922 0 2 0 4 20 0 0 45433 45459 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus lactis;t__Lactococcus lactis subsp. lactis 35 1 380 40 80 19 0 44928 47311 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sasangense;t__Flavobacterium sasangense DSM 21067 0 0 0 0 3 170 0 62824 62997 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Leeuwenhoekiella;s__Leeuwenhoekiella sp. MAR_2009_132;t__ 0 0 0 0 1497 8 0 81304 82809 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Paraglaciecola;s__Paraglaciecola arctica;t__Paraglaciecola arctica BSs20135 0 0 6 18 5 56 0 119067 119152 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Croceibacter;s__Croceibacter atlanticus;t__Croceibacter atlanticus HTCC2559 0 0 0 0 14 0 0 59045 59059 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Paraclostridium;s__Paraclostridium bifermentans;t__Paraclostridium bifermentans ATCC 638 0 7 0 19 468 0 0 71551 72045 k__Bacteria;p__Cyanobacteria;c__;o__Pleurocapsales;f__Hyellaceae;g__Pleurocapsa;s__Pleurocapsa minor;t__Pleurocapsa sp. PCC 7327 0 0 59 0 0 0 0 99677 99736 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Myzus persicae) 0 0 2 2 0 0 36 12830 12870 k__Bacteria;p__Cyanobacteria;c__;o__;f__;g__;s__cyanobacterium PCC 7702;t__ 0 0 35 0 0 0 0 96695 96730 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfarculales;f__Desulfarculaceae;g__Desulfocarbo;s__Desulfocarbo indianensis;t__ 0 55 248 0 0 0 0 101333 101636 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma modicum;t__Acholeplasma modicum ATCC 29102 0 0 0 0 1 2 0 24363 24366 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__Haemophilus sputorum;t__Haemophilus sputorum CCUG 13788 57 3 390 0 49 10 0 42190 42709 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella bissettii;t__Borreliella bissettii DN127 0 0 0 0 2 365 0 17648 18015 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Candidatus Mycoplasma haemominutum;t__Candidatus Mycoplasma haemominutum 'Birmingham 1' 0 0 0 0 0 0 0 10277 10277 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Cimex lectularius;t__ 0 0 0 0 0 19 0 24982 25001 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Syntrophaceticus;s__Syntrophaceticus schinkii;t__ 0 0 0 0 0 0 0 62782 62782 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Colwellia;s__Colwellia piezophila;t__Colwellia piezophila ATCC BAA-637 0 0 1 1 0 65 0 109412 109479 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Thalassobacillus;s__Thalassobacillus devorans;t__Thalassobacillus devorans MSP14 1 0 0 1 29 0 0 78369 78400 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sp. 316;t__ 0 0 0 0 70 49 0 78538 78657 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides paurosaccharolyticus;t__Bacteroides paurosaccharolyticus JCM 15092 0 1 0 3 0 3 0 68434 68441 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Microbulbiferaceae;g__Microbulbifer;s__Microbulbifer variabilis;t__Microbulbifer variabilis ATCC 700307 0 2 4 7 0 0 0 96649 96662 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Glaciecola;s__Glaciecola sp. HTCC2999;t__ 5 6 17 22 11 0 0 50298 50359 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Elizabethkingia;s__Elizabethkingia anophelis;t__Elizabethkingia anophelis NUHP1 0 1 0 0 569 0 0 86826 87396 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus jilunlii;t__ 0 0 0 2 0 38 0 140178 140218 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides fluxus;t__Bacteroides fluxus YIT 12057 0 44 0 27 0 478 0 85831 86380 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides faecichinchillae;t__Bacteroides faecichinchillae JCM 17102 0 0 0 390 0 2080 0 92915 95385 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;t__Cylindrospermum stagnale PCC 7417 1 0 12 40 32 0 0 139986 140071 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Acetobacterium;s__Acetobacterium dehalogenans;t__Acetobacterium dehalogenans DSM 11527 0 16 0 0 1 23 0 80666 80706 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium palustre;t__Chryseobacterium palustre DSM 21579 0 16 0 0 26 516 0 59029 59587 k__Bacteria;p__Fibrobacteres;c__Fibrobacteria;o__Fibrobacterales;f__Fibrobacteraceae;g__Fibrobacter;s__Fibrobacter succinogenes;t__Fibrobacter succinogenes subsp. succinogenes 0 0 0 0 0 0 0 76860 76860 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Tolypothrichaceae;g__Tolypothrix;s__Tolypothrix bouteillei;t__Tolypothrix bouteillei VB521301 0 0 5 37 0 0 0 216857 216899 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga canis;t__ 0 17 0 0 8 708 0 49772 50505 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomonas;s__Methylomonas methanica;t__Methylomonas methanica MC09 0 3 10 0 10 0 0 101010 101033 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus thermophilus;t__ 0 5 0 14 0 0 0 35729 35748 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Roseolovirus;s__Murine roseolovirus;t__ 0 0 0 0 0 0 0 3477 3477 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium halperniae;t__ 0 10 0 1 16 36 0 84622 84685 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Malacoherpesviridae;g__Ostreavirus;s__Ostreid herpesvirus 1;t__ 0 0 0 0 0 0 0 4148 4148 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Chroococcaceae;g__Geminocystis;s__Geminocystis herdmanii;t__Geminocystis herdmanii PCC 6308 0 0 7 0 1 0 0 85222 85230 k__Bacteria;p__Acidobacteria;c__Solibacteres;o__Solibacterales;f__Solibacteraceae;g__Candidatus Solibacter;s__Candidatus Solibacter usitatus;t__Candidatus Solibacter usitatus Ellin6076 0 0 0 0 0 0 0 199312 199312 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Salinispira;s__Salinispira pacifica;t__ 0 0 0 0 3 0 0 75652 75655 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium hydrogeniphilum;t__ 0 0 0 0 0 8 0 33677 33685 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hirschia;s__Hirschia maritima;t__Hirschia maritima DSM 19733 0 0 6 0 10 90 0 66899 67005 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Aphanizomenonaceae;g__Nodularia;s__Nodularia spumigena;t__Nodularia spumigena CCY9414 0 0 3 6 0 0 0 109006 109015 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Flavihumibacter;s__Flavihumibacter solisilvae;t__ 0 1 0 0 6 0 0 108069 108076 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus psychrosaccharolyticus;t__Bacillus psychrosaccharolyticus ATCC 23296 0 0 0 4 11 50 0 91238 91303 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Magnetococcales;f__Magnetococcaceae;g__Magnetococcus;s__Magnetococcus marinus;t__Magnetococcus marinus MC-1 0 4 6 0 0 0 0 94381 94391 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas;s__Zymomonas mobilis;t__Zymomonas mobilis subsp. mobilis 0 0 62 0 18 0 0 40355 40435 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas;s__Mangrovimonas yunxiaonensis;t__ 0 1 0 0 36 0 0 53343 53380 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Teredinibacter;s__Teredinibacter turnerae;t__Teredinibacter turnerae T7901 0 17 26 13 19 0 0 103788 103863 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Zooshikella;s__Zooshikella ganghwensis;t__Zooshikella ganghwensis DSM 15267 0 1 12 0 1 0 0 115176 115190 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas prydzensis;t__ 0 0 4 0 0 29 0 102994 103027 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Adoxophyes honmai nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2264 2264 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema bryantii;t__Treponema bryantii NK4A124 5 0 0 0 0 7 0 66127 66139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bat polyomavirus;t__Myotis polyomavirus VM-2008 0 0 0 0 0 0 0 101 101 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Arcticibacter;s__Arcticibacter svalbardensis;t__Arcticibacter svalbardensis MN12-7 0 1 0 0 5 0 0 93466 93472 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Candidatus Phytoplasma mali;t__ 0 0 0 0 0 2 0 12036 12038 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus mutans;t__Streptococcus mutans UA159 0 1 0 21 0 61 0 40575 40658 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas spongiae;t__Pseudoalteromonas spongiae UST010723-006 0 0 5 1 0 39 0 94220 94265 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Gracilibacillus;s__Gracilibacillus boraciitolerans;t__Gracilibacillus boraciitolerans JCM 21714 0 0 0 3 35 8 0 72820 72866 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia hydrogenotrophica;t__Blautia hydrogenotrophica DSM 10507 1 20 0 278 81 6 0 70464 70852 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bc431virus;s__Bacillus virus BCP82;t__Bacillus phage BCP8-2 0 0 0 0 3 839 0 2339 3181 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Aggregatibacter;s__Aggregatibacter aphrophilus;t__ 0 4 35 0 117 75 0 48057 48288 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina sp. WWM596;t__ 0 0 0 0 0 329 0 82417 82746 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Aggregatibacter;s__Aggregatibacter actinomycetemcomitans;t__ 0 4 30 0 0 0 0 46490 47358 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga canimorsus;t__Capnocytophaga canimorsus Cc5 0 1 0 0 17 0 0 51410 51428 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella baroniae;t__Prevotella baroniae DSM 16972 = JCM 13447 0 1 0 252 33 1121 0 61077 62484 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella oulorum;t__Prevotella oulorum JCM 14966 0 1 0 0 22 599 0 55668 56290 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena sp. PCC 7367;t__ 0 0 0 0 0 0 0 6311 6572 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus soli;t__ 1 0 1 0 8 0 0 99849 99859 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio brasiliensis;t__Desulfovibrio brasiliensis JCM 12178 0 0 0 1 0 19 0 70942 70962 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Capripoxvirus;s__Lumpy skin disease virus;t__Lumpy skin disease virus NI-2490 0 0 0 0 0 759 0 2256 3015 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cotton leaf curl betasatellite;t__ 0 0 0 0 0 2 0 25 27 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium sp. SMA-27;t__ 0 0 0 0 3 0 0 49811 49814 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Petrotogales;f__;g__Marinitoga;s__Marinitoga piezophila;t__Marinitoga piezophila KA3 0 0 0 0 0 36 0 44592 44628 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter;s__Maribacter thermophilus;t__ 0 0 0 0 0 0 0 80913 80913 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. UNC322MFChir4.1;t__ 0 0 0 9 0 51 0 98849 98909 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfonatronovibrio;s__Desulfonatronovibrio magnus;t__ 0 0 0 0 0 0 0 95619 95619 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__;g__;s__Oscillatoriales cyanobacterium JSC-12;t__ 0 0 36 0 0 0 0 110497 110533 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus harbinensis;t__Lactobacillus harbinensis DSM 16991 0 0 0 0 0 187 0 62310 62498 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sartagoforme;t__Clostridium sartagoforme AAU1 1 0 0 0 5 150 0 78894 79050 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina barkeri;t__Methanosarcina barkeri 3 0 0 0 0 0 136 292 90780 91208 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Empedobacter;s__Empedobacter brevis;t__Empedobacter brevis NBRC 14943 = ATCC 43319 0 402 0 0 156 0 0 75192 75750 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Riesia;s__Candidatus Riesia pediculicola;t__Candidatus Riesia pediculicola USDA 0 0 3 0 0 0 0 11484 11487 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Delftia;s__Delftia acidovorans;t__Delftia acidovorans SPH-1 0 3 3 57 146 0 0 135141 135350 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Eupatorium yellow vein betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Cetobacterium;s__Cetobacterium somerae;t__Cetobacterium somerae ATCC BAA-474 6 0 0 0 1 0 0 60888 60895 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides thetaiotaomicron;t__ 0 5 0 60 0 1174 20878 107636 129753 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella amnii;t__Prevotella amnii DSM 23384 = JCM 14753 0 1 0 459 11 1319 0 45693 47483 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema medium;t__Treponema medium ATCC 700293 1 0 0 0 0 270 0 54009 54280 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium soli;t__ 0 1 0 0 5 124 0 94913 95043 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] termitidis;t__[Clostridium] termitidis CT1112 0 0 0 4 2 29 0 128136 128171 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Coprococcus;s__Coprococcus comes;t__Coprococcus comes ATCC 27758 48 150 0 466 1168 17 0 62838 64695 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella;s__Winogradskyella sp. PG-2;t__ 0 0 0 74 58 2 0 76095 76229 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracasei;t__Lactobacillus paracasei subsp. paracasei 17 0 18 107 46 1663 27264 30669 59917 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Domibacillus;s__Domibacillus indicus;t__ 0 0 0 0 6 37 0 71986 72029 k__Bacteria;p__Candidatus Cloacimonetes;c__;o__;f__;g__Candidatus Cloacimonas;s__Candidatus Cloacimonas acidaminovorans;t__Candidatus Cloacimonas acidaminovorans str. Evry 1 0 0 0 0 0 0 44935 44936 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Twortvirus;s__Staphylococcus phage vB_SauM_Romulus;t__ 0 0 0 0 1072 1529 0 25 2626 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella nautarum;t__ 0 0 6 0 2 375 0 72476 72859 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Candidatus Nitrosopumilus salaria;t__Candidatus Nitrosopumilus salaria BD31 0 0 0 0 1 47 0 31067 31136 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ingluviei;t__Lactobacillus ingluviei str. Autruche 4 0 0 1 1 0 75 0 39441 39518 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__;g__;s__Methylophilales bacterium MBRSF5;t__ 0 0 2 7 0 0 0 27046 27055 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCDHM19;t__ 0 0 0 0 670 117 0 289 1076 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__;s__Parachlamydiaceae bacterium HS-T3;t__ 0 0 0 1 4 0 0 46092 46097 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Siansivirga;s__Siansivirga zeaxanthinifaciens;t__Siansivirga zeaxanthinifaciens CC-SAMT-1 0 2 0 9 99 0 0 65969 66079 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium columnare;t__Flavobacterium columnare ATCC 49512 0 1 0 0 17 28 0 63202 63248 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Thalassotalea;s__Thalassotalea sp. ND16A;t__ 0 0 5 10 20 0 0 91377 91412 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Rubinisphaera;s__Rubinisphaera brasiliensis;t__Rubinisphaera brasiliensis DSM 5305 0 0 0 0 1 0 0 120131 120132 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__;s__Flavobacteriaceae bacterium 3519-10;t__ 0 0 0 0 24 0 0 55338 55362 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Aminobacterium;s__Aminobacterium mobile;t__Aminobacterium mobile DSM 12262 2 0 0 0 0 0 0 42110 42112 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira meyeri;t__Leptospira meyeri serovar Hardjo 0 0 0 0 0 295 0 83453 83748 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides coprosuis;t__Bacteroides coprosuis DSM 18011 0 2 0 8 0 26 0 59795 59831 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium arbusti;t__Clostridium arbusti SL206 0 0 0 0 3 9 0 78931 78943 k__Bacteria;p__Acidobacteria;c__Holophagae;o__Holophagales;f__Holophagaceae;g__Geothrix;s__Geothrix fermentans;t__Geothrix fermentans DSM 14018 0 1 0 0 12 0 0 65668 65681 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus macroides;t__ 3 166 9 183 113 60 0 96298 96832 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Candidatus Profftella;s__Candidatus Profftella armatura;t__ 0 0 2 0 0 0 0 9185 9187 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Sanguibacteroides;s__Sanguibacteroides justesenii;t__ 39 2 0 3 0 0 0 67564 67615 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfobulbus;s__Desulfobulbus propionicus;t__Desulfobulbus propionicus DSM 2032 0 2 2 0 6 1 0 77026 77037 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__;g__Plesiomonas;s__Plesiomonas shigelloides;t__ 5 0 101 158 0 0 0 67855 68119 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage SANTOR1;t__ 0 0 0 0 0 47 0 711 758 k__Bacteria;p__Calditrichaeota;c__Calditrichae;o__Calditrichales;f__Calditrichaceae;g__Caldithrix;s__Caldithrix abyssi;t__Caldithrix abyssi DSM 13497 0 0 0 0 0 0 0 99570 99570 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio piger;t__ 0 1 0 0 3 51 0 56095 56150 k__Bacteria;p__;c__;o__;f__;g__;s__bacterium MS4;t__ 16 0 0 0 0 0 0 74708 74724 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium rivuli;t__Flavobacterium rivuli WB 3.3-2 = DSM 21788 0 0 0 0 4 129 0 89567 89700 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella rattaustraliani;t__Bartonella rattaustraliani AUST/NH4 0 0 2 25 0 79 0 42862 42970 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium mobile;t__Carnobacterium mobile DSM 4848 0 1 54 101 4 208 0 52280 52648 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Jeotgalicoccus;s__Jeotgalicoccus marinus;t__Jeotgalicoccus marinus DSM 19772 1 0 0 35 36 36 0 42006 42122 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium jeotgali;t__Carnobacterium jeotgali MS3 0 0 52 111 0 697 0 49484 50344 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium pleistocenium;t__Carnobacterium pleistocenium FTR1 0 2 43 64 2 222 0 52913 53246 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Cecembia;s__Cecembia lonarensis;t__Cecembia lonarensis LW9 706 4 0 28 146 0 0 95307 96191 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus cellicola;t__ 0 0 2 2 142 19 0 40561 40726 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides pyogenes;t__Bacteroides pyogenes JCM 10003 0 14 0 492 0 61 0 66839 67406 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella waltersii;t__ 0 0 2 0 1 704 0 72019 72726 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] symbiosum;t__[Clostridium] symbiosum WAL-14163 9 16 0 260 301 250 0 105154 105990 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Oribacterium;s__Oribacterium parvum;t__Oribacterium parvum ACB1 13 83 0 123 92 173 0 48923 49407 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Nit1virus;s__Bacillus virus Grass;t__Bacillus phage Grass 0 0 0 0 0 361 0 2771 3132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Nit1virus;s__Bacillus virus SPG24;t__Bacillus phage SPG24 0 0 0 0 0 1126 0 1915 3041 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus vitulinus;t__Staphylococcus vitulinus F1028 0 0 0 4 3 269 0 50491 50767 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. J37;t__ 0 65 0 24 3 58 0 106367 106517 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__;s__Tissierellia bacterium S5-A11;t__ 17 644 1870 0 24 0 0 63033 65588 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema phagedenis;t__Treponema phagedenis 4A 109 0 0 0 0 31 0 64806 64946 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium novyi;t__Clostridium novyi NT 0 12 0 0 0 25 0 50917 50954 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Candidatus Methanoperedenaceae;g__Candidatus Methanoperedens;s__Candidatus Methanoperedens nitroreducens;t__ 0 0 1 0 0 0 0 63809 63810 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus saerimneri;t__Lactobacillus saerimneri DSM 16049 0 0 3 1 0 134 0 34156 34294 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium genosp. SA-4;t__Bradyrhizobium genosp. SA-4 str. CB756 0 0 0 3 11 728 0 195755 196497 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Psychrilyobacter;s__Psychrilyobacter atlanticus;t__Psychrilyobacter atlanticus DSM 19335 1 0 0 0 33 0 0 70577 70611 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium plexicaudatum;t__Eubacterium plexicaudatum ASF492 0 2 0 2348 0 200 0 119091 121641 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Sediminibacter;s__Sediminibacter sp. Hel_I_10;t__ 0 1 0 0 250 0 0 81870 82121 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Nemo;t__ 0 0 0 0 0 5 0 3242 3247 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus aidingensis;t__Bacillus aidingensis DSM 18341 0 0 0 0 3 0 0 88256 88259 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus avium;t__Enterococcus avium ATCC 14025 1 87 4 4 0 311 0 91841 92248 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroserpens;s__Psychroserpens burtonensis;t__Psychroserpens burtonensis DSM 12212 0 0 0 2 73 0 0 79221 79296 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia pestis;t__Yersinia pestis CO92 0 0 21 1232 160 102 0 91559 93074 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Thermincola;s__Thermincola ferriacetica;t__ 0 17 0 0 2 0 0 63395 63414 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dyella;s__Dyella thiooxydans;t__ 0 0 2 26 0 0 0 84515 84543 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter lutiphocae;t__Psychrobacter lutiphocae DSM 21542 0 0 1 0 4 12 0 63260 63277 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Proteiniclasticum;s__Proteiniclasticum ruminis;t__Proteiniclasticum ruminis DSM 24773 0 1 0 1 43 0 0 62182 62229 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus luciferensis;t__ 0 0 0 1 8 8 0 97799 97816 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio alginolyticus;t__Vibrio alginolyticus NBRC 15630 = ATCC 17749 0 0 18 0 8 1624 1610 99634 102930 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Flammeovirga;s__Flammeovirga sp. OC4;t__ 21 0 0 0 0 44 0 160838 160903 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Dysgonomonas;s__Dysgonomonas gadei;t__Dysgonomonas gadei ATCC BAA-286 0 1 0 17 0 0 0 103180 103198 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella;s__Barnesiella intestinihominis;t__Barnesiella intestinihominis YIT 11860 0 11 0 2697 1 34 0 65897 68640 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera massiliensis;t__ 0 409 0 0 4 16 0 52545 52974 k__Viruses;p__dsDNA viruses, no RNA stage;c__Asfarviridae;o__;f__;g__Asfivirus;s__African swine fever virus;t__ 0 0 0 0 0 0 0 3402 3402 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Alkalibacillus;s__Alkalibacillus haloalkaliphilus;t__Alkalibacillus haloalkaliphilus C5 0 0 4 1 57 0 0 57486 57548 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus anthracis;t__Bacillus anthracis str. Sterne 1 6 14 34 44 80 0 104391 104573 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter equi;t__ 13 5 11 1 10 340 0 60705 61085 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium carboxidivorans;t__Clostridium carboxidivorans P7 0 0 0 0 33 102 0 114522 114657 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium cadaveris;t__Clostridium cadaveris AGR2141 5 1 0 1126 0 0 0 69561 70693 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanosphaera;s__Methanosphaera stadtmanae;t__Methanosphaera stadtmanae DSM 3091 0 0 0 0 8 0 0 35340 35348 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Ferroglobus;s__Ferroglobus placidus;t__Ferroglobus placidus DSM 10642 0 0 0 0 86 0 0 43839 43925 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella oxytoca;t__ 0 0 0 1395 275 213 0 14359 19378 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;s__Leptotrichia wadei;t__Leptotrichia wadei DSM 19758 1 0 0 3 0 116 0 46045 46165 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Holosporaceae;g__Holospora;s__Holospora obtusa;t__Holospora obtusa F1 0 1 1 0 0 0 0 26523 26525 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia helvetica;t__Rickettsia helvetica C9P9 0 0 1 0 1 766 0 26627 27395 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Intestinibacter;s__Intestinibacter bartlettii;t__Intestinibacter bartlettii DSM 16795 0 5 0 2 108 0 0 59283 59398 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Betaentomopoxvirus;s__Choristoneura rosaceana entomopoxvirus;t__Choristoneura rosaceana entomopoxvirus 'L' 0 0 0 0 0 642 0 5015 5657 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7822;t__ 0 0 17 0 0 21 0 121794 121832 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia caviae;t__Chlamydophila caviae GPIC 0 0 0 0 0 0 0 23467 23467 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylosarcina;s__Methylosarcina fibrata;t__Methylosarcina fibrata AML-C10 0 0 17 0 3 0 0 99531 99551 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Dysgonomonas;s__Dysgonomonas sp. BGC7;t__ 0 0 0 8 1 80 0 86290 86379 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Fluoribacter;s__Fluoribacter dumoffii;t__Fluoribacter dumoffii NY 23 0 0 9 0 630 0 0 72961 73600 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. PCC 7376;t__ 0 0 10 25 0 0 0 102483 102518 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cba181virus;s__Cellulophaga virus Cba121;t__Cellulophaga phage phi12:1 0 0 0 0 0 51 0 731 782 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Alphaentomopoxvirus;s__Anomala cuprea entomopoxvirus;t__ 0 0 0 0 0 0 0 4914 4914 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium perfringens;t__Clostridium perfringens ATCC 13124 0 0 0 0 29 64 0 65010 65133 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinilabiliaceae;g__Anaerophaga;s__Anaerophaga thermohalophila;t__Anaerophaga thermohalophila DSM 12881 0 2 0 0 0 0 0 86084 86086 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Betaentomopoxvirus;s__Mythimna separata entomopoxvirus;t__Mythimna separata entomopoxvirus 'L' 0 0 0 0 0 0 0 5623 5623 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Paeniclostridium;s__Paeniclostridium sordellii;t__ 0 17 0 7 0 0 0 70980 71004 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridescent virus 22;t__ 0 0 0 0 0 1063 0 2866 3929 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Suipoxvirus;s__Swinepox virus;t__ 0 0 0 0 0 0 0 2929 2929 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira alexanderi;t__Leptospira alexanderi serovar Manhao 3 0 0 0 0 0 650 0 83707 84357 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Liberibacter;s__Candidatus Liberibacter africanus;t__Candidatus Liberibacter africanus PTSAPSY 0 0 1 1 3 0 0 23839 23844 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus andreraoultii;t__ 4 122 31 9 81 460 0 80192 80899 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum;s__Tenacibaculum maritimum;t__Tenacibaculum maritimum NBRC 15946 0 0 0 0 12 0 0 64184 64196 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ahrensia;s__Ahrensia kielensis;t__Ahrensia kielensis DSM 5890 0 2 27 0 2 2 0 67153 67186 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus timonensis;t__ 0 1 0 1 10 17 0 91876 91905 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus cacaonum;t__Lactobacillus cacaonum DSM 21116 0 0 4 2 2 21 0 38295 38324 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium P6B14;t__ 0 2 0 2 2 0 0 53699 53705 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__;s__Golden Marseillevirus;t__ 0 0 0 0 0 0 0 7212 7212 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__Fervidobacterium;s__Fervidobacterium islandicum;t__ 47 0 0 0 1 1296 0 43403 44747 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Dysgonomonas;s__Dysgonomonas capnocytophagoides;t__Dysgonomonas capnocytophagoides DSM 22835 0 0 0 2 0 134 0 87315 87451 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum A 0 0 0 6 24 47 0 75134 75211 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium suncheonense;t__Flavobacterium suncheonense GH29-5 = DSM 17707 0 0 0 0 6 20 0 57364 57390 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Novispirillum;s__Novispirillum itersonii;t__Novispirillum itersonii subsp. itersonii 0 115 1 2 0 0 0 85602 85720 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Psychromonadaceae;g__Psychromonas;s__Psychromonas hadalis;t__Psychromonas hadalis ATCC BAA-638 0 0 0 0 0 8 0 78936 78944 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobaculum;s__Chlorobaculum parvum;t__Chlorobaculum parvum NCIB 8327 0 0 0 0 20 0 0 45764 45784 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium jeonii;t__ 0 0 0 0 20 33 0 65108 65161 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus azotoformans;t__Bacillus azotoformans LMG 9581 7 0 26 1 5 302 0 83810 84151 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. ASF356;t__ 0 11 0 55 0 0 0 57891 57957 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Ochrovirga;s__Ochrovirga pacifica;t__ 0 0 0 0 5 0 0 67541 67546 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Paraglaciecola;s__Paraglaciecola polaris;t__Paraglaciecola polaris LMG 21857 0 0 197 60 47 10 0 104194 104508 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus sinduriensis;t__Lysinibacillus sinduriensis BLB-1 = JCM 15800 0 0 0 1 53 0 0 80185 80239 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Johnsonella;s__Johnsonella ignava;t__Johnsonella ignava ATCC 51276 19 507 0 265 214 0 0 52295 53300 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Fictibacillus;s__Fictibacillus macauensis;t__Fictibacillus macauensis ZFHKF-1 70 2 1 6 28 0 0 74515 74622 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium phaeobacteroides;t__Chlorobium phaeobacteroides BS1 4 0 0 0 244 20 4 54456 54728 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter tandoii;t__Acinetobacter tandoii DSM 14970 = CIP 107469 16 2 2 0 10 1142 0 79949 81122 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax hongdengensis;t__Alcanivorax hongdengensis A-11-3 1 30 71 0 0 0 0 73023 73125 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinilabiliaceae;g__Thermophagus;s__Thermophagus xiamenensis;t__ 0 30 5 0 2 0 0 77019 77056 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Niastella;s__Niastella koreensis;t__Niastella koreensis GR20-10 1 0 0 0 12 0 0 180660 180673 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfotalea;s__Desulfotalea psychrophila;t__Desulfotalea psychrophila LSv54 0 10 0 0 3 0 0 70447 70467 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__;g__;s__Methylophilales bacterium HTCC2181;t__ 0 0 1 6 0 6 0 26071 26084 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus massiliensis;t__ 0 0 1 7 0 0 0 54238 54246 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium leiognathi;t__ 0 0 6 0 27 49 0 91796 91878 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium;s__Janthinobacterium sp. B9-8;t__ 0 0 10 0 0 0 0 94526 94536 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium celatum;t__Clostridium celatum DSM 1785 1 0 0 0 0 12 0 70802 70815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Muromegalovirus;s__Murid betaherpesvirus 2;t__Rat cytomegalovirus Maastricht 0 0 0 0 0 0 0 4602 4602 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus fermentum;t__Lactobacillus fermentum IFO 3956 6 0 8 13 4 670 0 41270 41973 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter brisouii;t__Acinetobacter brisouii CIP 110357 16 6 10 0 10 374 0 62475 62891 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc citreum;t__Leuconostoc citreum KM20 0 0 7 4 34 240 0 35640 35925 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia producta;t__Blautia producta ATCC 27340 = DSM 2950 0 1 0 423 288 488 0 120266 121466 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea agglomerans;t__ 0 2 21 174 34 0 0 83409 83640 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelothrix;s__Erysipelothrix rhusiopathiae;t__Erysipelothrix rhusiopathiae str. Fujisawa 0 0 0 0 0 0 0 35758 35758 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia xenovorans;t__Paraburkholderia xenovorans LB400 0 279 192 1703 166 114 0 192165 194619 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium phaeovibrioides;t__Chlorobium phaeovibrioides DSM 265 0 0 0 0 291 10 0 39036 39337 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas citrea;t__Pseudoalteromonas citrea DSM 8771 0 0 5 0 0 48 0 105921 105974 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Dickeya;s__Dickeya dadantii;t__Dickeya dadantii 3937 4 0 20 141 155 3169 0 94967 98456 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Duganella;s__Duganella zoogloeoides;t__Duganella zoogloeoides ATCC 25935 0 0 0 1 32 0 0 125291 125324 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Kurthia;s__Kurthia senegalensis;t__ 0 0 3 8 6 0 0 59381 59398 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sneathiellales;f__Sneathiellaceae;g__Sneathiella;s__Sneathiella glossodoripedis;t__Sneathiella glossodoripedis JCM 23214 0 0 3 0 0 0 0 72560 72563 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Idiomarinaceae phage 1N2-2;t__ 0 0 0 0 0 0 0 695 695 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus asini;t__Enterococcus asini ATCC 700915 0 2 24 39 22 290 0 51075 51452 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Tetrasphaera;s__Tetrasphaera australiensis;t__Tetrasphaera australiensis Ben110 1 0 11 48 53 8 0 83128 83249 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__Neochlamydia;s__Neochlamydia sp. EPS4;t__ 0 0 0 0 0 0 0 50402 50402 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Granulibacter;s__Granulibacter bethesdensis;t__Granulibacter bethesdensis CGDNIH1 0 3 1 0 25 0 0 54138 54167 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus thermophilus;t__Thermus thermophilus HB8 0 0 2 0 0 92 0 36900 36994 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Glaciecola;s__Glaciecola nitratireducens;t__Glaciecola nitratireducens FR1064 0 0 23 35 18 14 0 82594 82684 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halobacillus;s__Halobacillus kuroshimensis;t__Halobacillus kuroshimensis DSM 18393 0 0 0 0 8 2 0 76836 76846 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella disiens;t__Prevotella disiens JCM 6334 = ATCC 29426 20 1 0 461 33 440 0 54638 55593 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Chania;s__Chania multitudinisentens;t__Chania multitudinisentens RB-25 0 0 22 117 246 0 0 109378 109763 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum gibsoniae;t__Desulfotomaculum gibsoniae DSM 7213 0 12 0 3 12 0 0 97083 97110 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium oral taxon 500;t__Lachnospiraceae oral taxon 107 str. F0167 36 28 0 206 576 9 0 64552 65407 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella bryantii;t__Prevotella bryantii B14 0 10 0 5 0 164 0 71494 71673 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Hamiltonella;s__Candidatus Hamiltonella defensa;t__Candidatus Hamiltonella defensa (Bemisia tabaci) 0 0 1 6 0 0 0 35840 35847 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__endosymbiont of Ridgeia piscesae;t__ 0 0 4 0 3 0 0 67030 67037 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis sp. AC466;t__ 1 58 2 0 11 17 0 93779 93868 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera ascorbata;t__Kluyvera ascorbata ATCC 33433 0 0 8 123 145 325 0 97555 98168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Escherichia virus EK99P1;t__Escherichia phage EK99P-1 0 0 0 0 0 44 0 842 886 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Morganella;s__Morganella morganii;t__Morganella morganii subsp. morganii 56 0 52 158 242 0 0 75482 75990 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia mannitolilytica;t__ 0 55 40 337 120 215 0 92531 93298 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Oleiagrimonas;s__Oleiagrimonas soli;t__ 0 1 3 7 4 0 0 67511 67526 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacter;s__Desulfobacter vibrioformis;t__Desulfobacter vibrioformis DSM 8776 0 0 0 0 2 34 0 89132 89168 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Luteibacter;s__Luteibacter yeojuensis;t__ 0 0 1 9 31 0 0 90665 90706 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella brunensis;t__ 0 0 3 0 0 11 0 74796 74810 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O83:H1 4 8 29 133 302 0 28563 65572 94956 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Colwellia;s__Colwellia psychrerythraea;t__ 0 0 16 7 16 0 226 114065 114330 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma anatis;t__Mycoplasma anatis 1340 0 0 0 0 0 16 0 18476 18492 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens;s__Nonlabens sp. YIK11;t__ 0 0 0 0 30 74 0 65107 65211 k__Archaea;p__Thaumarchaeota;c__;o__;f__;g__;s__Thaumarchaeota archaeon N4;t__ 0 0 2 0 0 0 0 32696 32698 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Fictibacillus;s__Fictibacillus gelatini;t__Fictibacillus gelatini DSM 15865 0 0 1 4 62 0 0 83123 83190 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium NK4A179;t__ 0 0 0 0 2 0 0 64320 64322 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella sp. FB-8;t__ 0 1 3 41 40 35 0 81327 81447 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. JDR-2;t__ 0 1 0 40 48 291 0 143318 143698 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus ndiopicus;t__ 0 1 0 14 22 10 0 81267 81314 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus antibioticophila;t__ 0 0 0 9 0 13 0 111271 111293 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gillisia;s__Gillisia marina;t__ 0 2 0 0 24 16 0 59372 59414 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium solincola;t__ 0 0 0 0 20 26 0 46834 46880 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella quinlivanii;t__ 0 0 8 0 0 237 0 70573 70818 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Hippea;s__Hippea jasoniae;t__ 0 0 0 0 0 1 0 34262 34263 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium 1_7_47FAA;t__ 17 2 0 289 0 0 0 129661 129969 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Candidatus Photodesmus;s__Candidatus Photodesmus katoptron;t__Candidatus Photodesmus katoptron Akat1 0 0 5 0 4 0 0 20007 20016 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroserpens;s__Psychroserpens jangbogonensis;t__ 15 0 0 4 30 14 0 72493 72556 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. SYK-6;t__ 0 0 3 16 32 57 0 83878 83986 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Nitritalea;s__Nitritalea halalkaliphila;t__Nitritalea halalkaliphila LW7 0 2 0 0 8 0 0 72400 72410 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halobacteroidaceae;g__Orenia;s__Orenia marismortui;t__Orenia marismortui DSM 5156 0 0 0 2 1 0 0 69102 69105 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__Congregibacter;s__Congregibacter litoralis;t__Congregibacter litoralis KT71 0 21 155 64 4 0 0 86758 87002 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina atlantica;t__ 0 2 50 3 0 309 0 53608 53972 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanococcus;s__Methanococcus maripaludis;t__Methanococcus maripaludis C7 0 0 0 0 0 83 255 35115 35453 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Halodesulfovibrio;s__Halodesulfovibrio aestuarii;t__Halodesulfovibrio aestuarii DSM 10141 0 0 0 0 3 0 0 67994 67997 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Candidatus Phytoplasma phoenicium;t__ 0 0 0 0 0 0 0 6771 6771 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage 121Q;t__ 0 0 0 0 0 0 0 6970 6970 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Isosphaeraceae;g__Singulisphaera;s__Singulisphaera acidiphila;t__Singulisphaera acidiphila DSM 18658 1 0 0 0 14 0 0 192578 192593 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum BKT015925 0 11 0 0 1 449 6 54996 55463 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Komagataeibacter;s__Komagataeibacter medellinensis;t__Komagataeibacter medellinensis NBRC 3288 0 2 2 0 362 159 0 62210 62736 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Collimonas;s__Collimonas pratensis;t__ 0 0 11 13 56 0 0 114520 114600 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella spielmanii;t__Borreliella spielmanii A14S 0 0 0 0 0 5 0 6908 6913 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Mesoplasma;s__Mesoplasma florum;t__Mesoplasma florum L1 0 0 13 1 0 0 0 15850 15864 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Saccharophagus;s__Saccharophagus degradans;t__Saccharophagus degradans 2-40 1 0 12 10 9 0 0 101118 101150 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] papyrosolvens;t__[Clostridium] papyrosolvens DSM 2782 0 0 0 0 3 83 0 98163 98249 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__Luminiphilus;s__Luminiphilus syltensis;t__Luminiphilus syltensis NOR5-1B 0 0 5 4 0 0 0 64887 64896 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus marincola;t__Algoriphagus marincola DSM 16067 0 2 0 5 5 6 0 88461 88479 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sp. ACAM 123;t__ 0 0 0 0 3 32 0 78543 78578 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas xinjiangensis;t__ 0 0 6 1 3 30 0 75678 75718 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinobacterium;s__Marinobacterium stanieri;t__Marinobacterium stanieri S30 1 1 11 3 1 6 0 87283 87306 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Thiolapillus;s__Thiolapillus brandeum;t__ 0 0 7 0 0 0 0 62586 62593 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Psychromonadaceae;g__Psychromonas;s__Psychromonas ossibalaenae;t__Psychromonas ossibalaenae ATCC BAA-1528 0 0 0 0 0 5 0 103832 103837 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cytotoxicus;t__Bacillus cytotoxicus NVH 391-98 0 5 14 26 65 494 0 81136 81740 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. AS9601 0 0 1 0 0 0 15 33381 33397 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides oleiciplenus;t__Bacteroides oleiciplenus YIT 12058 0 12 0 1606 0 961 0 138788 141367 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma axanthum;t__Acholeplasma axanthum ATCC 25176 138 0 0 0 0 0 0 35852 35990 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bacteriovoracaceae;g__Bacteriovorax;s__Bacteriovorax sp. BSW11_IV;t__ 0 0 0 0 0 0 0 72891 72891 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas eucrenophila;t__ 0 0 10 0 0 363 0 90228 90601 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Azotobacter;s__Azotobacter vinelandii;t__Azotobacter vinelandii DJ 0 0 37 0 107 0 0 107162 107306 k__Bacteria;p__Chrysiogenetes;c__Chrysiogenetes;o__Chrysiogenales;f__Chrysiogenaceae;g__Chrysiogenes;s__Chrysiogenes arsenatis;t__Chrysiogenes arsenatis DSM 11915 33 0 0 0 7 0 0 56416 56456 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__;s__gamma proteobacterium HIMB55;t__ 0 0 4 3 0 0 0 54730 54737 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter daejeonensis;t__Lysobacter daejeonensis GH1-9 13 2 3 0 52 108 0 65155 65333 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter sp. MIT 97-5078;t__ 0 0 0 1 0 56 0 48644 48701 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio gigas;t__Desulfovibrio gigas DSM 1382 = ATCC 19364 0 0 0 0 0 1 0 73350 73351 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter pametensis;t__Helicobacter pametensis ATCC 51478 0 0 1 7 4 43 0 28600 28655 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bacteriovoracaceae;g__Bacteriovorax;s__Bacteriovorax sp. BAL6_X;t__ 0 0 0 4 0 2 0 64650 64656 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Prolixibacteraceae;g__Draconibacterium;s__Draconibacterium orientale;t__ 0 1 55 4 0 0 0 102581 102641 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella cherrii;t__ 0 0 2 0 0 0 0 79164 79169 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina acetivorans;t__Methanosarcina acetivorans C2A 0 0 0 0 0 1704 0 113325 115029 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfonatronovibrio;s__Desulfonatronovibrio hydrogenovorans;t__Desulfonatronovibrio hydrogenovorans DSM 9292 0 0 0 3 3 15 0 58731 58752 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanohalophilus;s__Methanohalophilus mahii;t__Methanohalophilus mahii DSM 5219 0 0 0 0 6 0 0 40242 40248 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus ginsengihumi;t__Bacillus ginsengihumi J57 0 0 0 1 247 44 0 77993 78285 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Sporolactobacillaceae;g__Sporolactobacillus;s__Sporolactobacillus terrae;t__Sporolactobacillus terrae DSM 11697 0 1 1 3 0 21 0 63871 63897 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium formicicum;t__ 0 0 0 0 6 3 33 48957 48999 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Mariniradius;s__Mariniradius saccharolyticus;t__Mariniradius saccharolyticus AK6 0 0 0 3 0 0 0 97016 97019 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax sp. Root217;t__ 0 1 1 7 69 74 0 134074 134226 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Atopococcus;s__Atopococcus tabaci;t__Atopococcus tabaci DSM 17538 0 0 0 9 9 0 0 45020 45038 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Runella;s__Runella zeae;t__Runella zeae DSM 19591 0 1 0 0 3 67 0 151377 151448 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] scindens;t__[Clostridium] scindens ATCC 35704 27 45 0 413 447 17 0 71321 72273 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halanaerobiaceae;g__Halanaerobium;s__Halanaerobium praevalens;t__Halanaerobium praevalens DSM 2228 0 0 0 0 0 0 0 46185 46185 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus lentus;t__Staphylococcus lentus F1142 0 2 1 3 4 71 0 55338 55419 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__;f__;g__Candidatus Babela;s__Candidatus Babela massiliensis;t__ 0 0 0 0 0 0 0 22368 22368 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella rubrilucens;t__ 0 0 1 0 0 251 0 62247 62499 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Fusarium poae partitivirus 2;t__ 0 0 0 0 0 0 0 94 94 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Denitrovibrio;s__Denitrovibrio acetiphilus;t__Denitrovibrio acetiphilus DSM 12809 1 0 0 0 0 0 0 64440 64441 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Aphis glycines) 0 0 2 0 0 0 18 12543 12563 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Imtechella;s__Imtechella halotolerans;t__Imtechella halotolerans K1 0 1 1 0 20 0 0 61634 61656 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces viridochromogenes;t__Streptomyces viridochromogenes DSM 40736 1 0 3 0 0 1711 0 168808 170523 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Hapalosiphonaceae;g__Fischerella;s__Fischerella sp. PCC 9605;t__ 1 0 3 3 4 0 0 161460 161471 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanoregulaceae;g__Methanoregula;s__Methanoregula boonei;t__Methanoregula boonei 6A8 0 0 0 2 0 0 0 50856 50858 k__Bacteria;p__Cyanobacteria;c__;o__;f__;g__;s__cyanobacterium endosymbiont of Epithemia turgida;t__cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 0 0 21 0 0 0 0 55865 55886 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. IHBB 10380;t__ 0 0 0 1 0 0 0 115403 115404 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoclostridium;s__Peptoclostridium litorale;t__Peptoclostridium litorale DSM 5388 0 19 0 23 2 0 0 67448 67492 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter tropicus;t__Spongiibacter tropicus DSM 19543 0 152 65 614 0 57 0 78046 78934 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina vacuolata;t__Methanosarcina vacuolata Z-761 0 0 0 0 1 363 0 89751 90115 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__;s__Felis catus gammaherpesvirus 1;t__ 0 0 0 0 0 0 0 2450 2450 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Human betaherpesvirus 5;t__ 0 0 0 0 0 2 0 4710 4712 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Pontibacter;s__Pontibacter lucknowensis;t__ 0 0 0 0 1 12 0 89428 89441 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Capripoxvirus;s__Goatpox virus;t__Goatpox virus Pellor 0 0 0 0 0 274 0 2717 2991 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Brugia malayi;t__Wolbachia endosymbiont strain TRS of Brugia malayi 0 0 0 0 0 0 0 21601 21601 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia;s__Zobellia uliginosa;t__ 0 0 0 0 57 0 0 107101 107158 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Deefgea;s__Deefgea rivuli;t__Deefgea rivuli DSM 18356 0 0 4 0 2 0 0 74153 74159 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp. Is79A3;t__ 0 0 7 0 0 21 0 75640 75668 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gillisia;s__Gillisia sp. Hel_I_29;t__ 0 0 2 0 1261 21 0 77887 79171 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella histicola;t__Prevotella histicola JCM 15637 = DNF00424 0 4 0 5 1 1262 0 57624 58896 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Dokdonia;s__Dokdonia donghaensis;t__Dokdonia donghaensis DSW-1 0 1 0 0 22 0 0 65855 65878 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Riesia;s__Candidatus Riesia pediculischaeffi;t__Candidatus Riesia pediculischaeffi PTSU 0 0 8 2 0 2 0 11397 11409 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Cyclobacterium;s__Cyclobacterium qasimii;t__Cyclobacterium qasimii M12-11B 67 664 0 2 3 27 0 124696 125459 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Thalassolituus;s__Thalassolituus oleivorans;t__Thalassolituus oleivorans MIL-1 0 10 432 5 96 0 0 77863 78406 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Anaerobacillus;s__Anaerobacillus macyae;t__ 1 0 2 5 14 0 0 85080 85102 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella afzelii;t__Borrelia afzelii HLJ01 0 0 0 0 0 116 0 17993 18109 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__Candidatus Protochlamydia;s__Protochlamydia naegleriophila;t__ 0 0 0 1 7 59 0 57634 57701 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium akagii;t__Clostridium akagii DSM 12554 0 0 0 0 1 4 0 91637 91642 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Turneriella;s__Turneriella parva;t__Turneriella parva DSM 21527 0 0 0 0 0 0 0 87680 87680 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus meridiei;t__Desulfosporosinus meridiei DSM 13257 0 0 0 1 101 300 0 97068 97471 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia muris;t__Ehrlichia muris AS145 0 0 0 0 0 33 0 23901 23934 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__Competibacteraceae;g__Candidatus Contendobacter;s__Candidatus Contendobacter odensis;t__Candidatus Contendobacter odensis Run_B_J11 0 1 6 0 0 0 0 91616 91623 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylotenera;s__Methylotenera versatilis;t__Methylotenera versatilis 79 0 0 8 0 12 0 1 52064 52085 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Cyanobacteriaceae;g__Cyanobacterium;s__Cyanobacterium aponinum;t__Cyanobacterium aponinum PCC 10605 0 0 22 6 0 0 0 82253 82281 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanoplanus;s__Methanoplanus limicola;t__Methanoplanus limicola DSM 2279 0 0 0 0 4 0 0 63986 63990 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum arsenophilum;t__Sulfurospirillum arsenophilum NBRC 109478 0 0 0 1 3 45 0 52532 52581 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Chlorogloeopsidaceae;g__Chlorogloeopsis;s__Chlorogloeopsis fritschii;t__Chlorogloeopsis fritschii PCC 6912 3 0 7 92 0 0 0 154630 154732 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium A2;t__ 1 19 0 463 115 1907 0 101420 103925 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Solitalea;s__Solitalea canadensis;t__Solitalea canadensis DSM 3403 0 2 0 0 19 0 0 104020 104041 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus phoeniculicola;t__Enterococcus phoeniculicola ATCC BAA-412 0 0 12 10 0 101 0 78078 78201 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma brassicae;t__ 33 0 0 0 2 16 0 37504 37555 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus oryzae;t__Lactobacillus oryzae JCM 18671 0 0 3 36 7 599 0 36384 37039 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus hominis;t__Staphylococcus hominis subsp. hominis 68 7 20 9 4 499 0 44472 45094 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter;s__Maribacter antarcticus;t__Maribacter antarcticus DSM 21422 0 0 0 0 102 34 0 96799 96935 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter thiooxydans;t__ 0 3 0 6 7 1 0 82337 82354 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium nucleatum;t__Fusobacterium nucleatum subsp. animalis 1 0 0 0 0 0 820 49333 50154 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Fortieaceae;g__Fortiea;s__Fortiea contorta;t__Fortiea contorta PCC 7126 0 0 10 72 0 0 0 114751 114833 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7336;t__ 0 1 3 3 1 2 0 101296 101306 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Faecalibacterium;s__Faecalibacterium prausnitzii;t__Faecalibacterium prausnitzii A2-165 0 14 0 1833 363 0 0 59189 61399 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Stomatobaculum;s__Stomatobaculum longum;t__ 17 21 0 390 224 0 0 45490 46142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus B;t__ 0 0 0 0 0 0 0 695 695 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides fragilis;t__Bacteroides fragilis YCH46 0 6 0 152 0 1042 0 104345 105545 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanocellales;f__Methanocellaceae;g__Methanocella;s__Methanocella arvoryzae;t__Methanocella arvoryzae MRE50 0 0 0 0 0 2 0 63596 63598 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Acyrthosiphon kondoi) 0 0 0 0 0 0 0 226 226 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus entericus;t__Streptococcus entericus DSM 14446 0 315 2 10 0 175 0 40135 40638 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planococcus;s__Planococcus kocurii;t__ 2 0 5 117 46 2 0 69269 69441 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Gammabaculovirus;s__Neodiprion abietis NPV;t__ 0 0 0 0 0 0 0 1685 1685 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella parvula;t__Veillonella parvula DSM 2008 0 0 0 0 2 0 0 42640 42642 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium beibuense;t__Flavobacterium beibuense F44-8 0 0 0 1 67 16 0 75819 75903 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella spielmanii;t__Borreliella spielmanii A14S 0 0 0 0 1 253 0 17796 18050 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__;s__Peptostreptococcaceae bacterium VA2;t__ 7 22 0 9 619 0 0 70994 71651 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnobacterium;s__Lachnobacterium bovis;t__ 0 0 0 26 71 0 0 56751 56848 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya valderiana;t__Leptolyngbya valderiana BDU 20041 0 0 69 0 0 0 0 138958 139027 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Culex molestus;t__Wolbachia endosymbiont wPip_Mol of Culex molestus 0 0 0 0 0 19984 0 6471 26455 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium acetobutylicum;t__Clostridium acetobutylicum ATCC 824 0 1 0 0 13 55 0 78748 78817 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Paucisalibacillus;s__Paucisalibacillus globulus;t__Paucisalibacillus globulus DSM 18846 0 0 1 0 44 0 0 84532 84577 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia duttonii;t__Borrelia duttonii Ly 0 0 0 0 0 0 0 12680 12836 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Tumebacillus;s__Tumebacillus flagellatus;t__ 43 1 0 2 1 0 0 97244 97291 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Domibacillus;s__Domibacillus enclensis;t__ 0 0 0 0 2 0 0 76671 76673 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina horonobensis;t__Methanosarcina horonobensis HB-1 = JCM 15518 0 0 0 0 0 64 0 100308 100372 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium 10-1;t__ 11 2 0 289 108 1879 0 87759 90048 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;s__Leptotrichia sp. oral taxon 212;t__ 0 0 0 0 0 0 0 48898 48898 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella osloensis;t__ 8 4 6 0 30 0 0 48645 48693 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Marvinbryantia;s__Marvinbryantia formatexigens;t__Marvinbryantia formatexigens DSM 14469 0 6 0 79 88 0 0 90698 90871 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella burgdorferi;t__Borrelia burgdorferi B31 0 0 0 0 0 11 0 12162 12173 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Candidatus Endolissoclinum;s__Candidatus Endolissoclinum faulkneri;t__Candidatus Endolissoclinum faulkneri L5 0 0 3 0 1 0 18 30350 30372 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfurimonas;s__Sulfurimonas denitrificans;t__Sulfurimonas denitrificans DSM 1251 0 0 14 2 1 31 0 43983 44031 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Coprobacter;s__Coprobacter fastidiosus;t__Coprobacter fastidiosus NSB1 0 1 0 20 0 0 0 68048 68069 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Streptobacillus;s__Streptobacillus moniliformis;t__Streptobacillus moniliformis DSM 12112 89 0 0 0 16 0 0 33146 33251 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix sp. PCC 7103;t__ 0 0 16 22 0 4 0 231393 231435 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera sp. BV3C16-1;t__ 4 178 0 0 4 129 0 43856 44171 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium angstadtii;t__ 0 0 0 0 2 57 0 103978 104037 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium butyricum;t__ 0 0 0 0 0 0 0 92556 92556 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Candidatus Methylopumilus;s__Candidatus Methylopumilus planktonicus;t__ 0 0 2 0 0 0 0 27126 27128 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira;s__Brachyspira alvinipulli;t__Brachyspira alvinipulli ATCC 51933 0 0 0 0 0 114 0 68059 68173 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Oleispira;s__Oleispira antarctica;t__Oleispira antarctica RB-8 0 1 31 1 5 0 0 88089 88127 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum;s__Tenacibaculum dicentrarchi;t__ 0 0 0 0 121 217 0 58027 58365 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella garinii;t__ 0 0 0 0 0 0 0 18112 18112 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__Anaerovorax;s__Anaerovorax odorimutans;t__Anaerovorax odorimutans DSM 5092 0 0 0 2 0 0 0 65137 65139 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus porci;t__Streptococcus porci DSM 23759 1 99 0 3 0 173 0 45435 45711 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella wadsworthii;t__Legionella wadsworthii DSM 21896 = ATCC 33877 0 1 4 0 0 30 0 71385 71420 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Syntrophomonadaceae;g__Syntrophomonas;s__Syntrophomonas palmitatica;t__Syntrophomonas palmitatica JCM 14374 0 0 1 0 1 3 0 51505 51510 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Clostera anastomosis granulovirus A;t__Clostera anastomosis granulovirus Henan 0 0 0 0 0 27 0 2009 2036 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium commune;t__Thermodesulfobacterium commune DSM 2178 142 0 0 0 0 10 0 35128 35280 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Psychromonadaceae;g__Psychromonas;s__Psychromonas sp. CNPT3;t__ 0 0 43 28 0 235 0 60742 61048 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium sp. Leaf180;t__ 0 0 0 0 7 96 0 66945 67048 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Jeotgalibacillus;s__Jeotgalibacillus soli Cunha et al. 2012;t__ 0 0 1 18 5 18 0 75452 75494 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia sp. ATCC 39006;t__ 0 1 16 262 11 11 0 98581 98882 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Uroleucon ambrosiae) 0 0 3 0 0 0 28 12276 12307 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Macavirus;s__Bovine gammaherpesvirus 6;t__ 0 0 0 0 0 0 0 2897 2897 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__Melanoplus sanguinipes entomopoxvirus;t__ 0 0 0 0 0 0 0 4722 4722 k__Bacteria;p__Firmicutes;c__;o__;f__;g__;s__Firmicutes bacterium M10-2;t__ 0 216 0 0 0 0 0 46790 47006 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Diaphorina citri;t__ 0 0 0 0 0 5877 0 18139 24016 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium ciceri;t__Mesorhizobium ciceri biovar biserrulae 0 0 0 0 0 0 0 8466 8510 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium paludis;t__ 0 0 0 0 6 23 0 50901 50930 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria grayi;t__Listeria grayi DSM 20601 0 2 10 14 0 38 0 50367 50431 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia psychrophila;t__ 0 1 1 0 0 39 0 89900 89941 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema socranskii;t__Treponema socranskii subsp. paredis 0 0 0 0 0 45 0 54561 54606 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gramella;s__Gramella forsetii;t__Gramella forsetii KT0803 0 0 0 0 191 0 0 75778 75969 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Aphanothecaceae;g__Candidatus Atelocyanobacterium;s__Candidatus Atelocyanobacterium thalassa;t__Candidatus Atelocyanobacterium thalassa isolate ALOHA 0 0 11 1 5 0 0 28859 28876 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__Mimivirus;s__Acanthamoeba polyphaga mimivirus;t__ 0 0 0 0 0 0 0 23630 23630 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lacinutrix;s__Lacinutrix sp. 5H-3-7-4;t__ 0 0 0 0 21 69 0 65833 65923 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium aquae;t__ 0 0 8 0 10 62 0 101288 101368 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus oeni;t__Lactobacillus oeni DSM 19972 1 0 1 57 8 914 0 41280 42261 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenitalea;s__Arenitalea lutea;t__ 0 0 0 0 27 0 0 67579 67606 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoanaerobacter;s__Peptoanaerobacter stomatis;t__ 1 3 0 2 0 44 0 46169 46219 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Gayadomonas;s__Gayadomonas joobiniege;t__Gayadomonas joobiniege G7 0 0 47 30 25 0 0 62704 62806 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__[Eubacterium] eligens;t__[Eubacterium] eligens ATCC 27750 0 0 0 0 0 0 0 13305 13742 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella jordanis;t__ 0 0 5 1 0 51 0 61630 61687 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] saccharolyticum;t__[Clostridium] saccharolyticum WM1 0 6 0 76 54 272 0 92849 93257 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum;s__Tenacibaculum mesophilum;t__ 4 0 0 0 10 0 0 68256 68270 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__;s__Porphyromonadaceae bacterium COT-184 OH4590;t__ 35 7 0 3 0 0 0 47662 47707 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Candidatus Arthromitus;s__Candidatus Arthromitus sp. SFB-rat-Yit;t__ 0 0 0 0 25 0 0 30286 30311 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus massiliosenegalensis;t__Bacillus massiliosenegalensis JC6 9 10 1 281 17 171 0 97236 97725 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia hermsii;t__Borrelia hermsii DAH 0 0 0 0 12 0 0 18434 18446 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter ureolyticus;t__Campylobacter ureolyticus RIGS 9880 0 0 0 0 7 14 0 32816 32837 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Succinispira;s__Succinispira mobilis;t__Succinispira mobilis DSM 6222 0 0 6 0 0 0 0 41690 41696 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. P4-76;t__ 0 3 0 57 0 82 0 64959 65101 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium ND2006;t__ 0 0 0 0 29 59 0 78613 78701 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter junii;t__ 18 3 19 1 10 444 0 67071 67566 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Lunatimonas;s__Lunatimonas lonarensis;t__ 22 3 0 0 70 0 0 107508 107603 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Alicycliphilus;s__Alicycliphilus denitrificans;t__Alicycliphilus denitrificans K601 0 61 1 245 223 0 0 99375 99905 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella spiritensis;t__ 0 0 2 0 0 24 0 66076 66102 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Bilophila;s__Bilophila wadsworthia;t__Bilophila wadsworthia ATCC 49260 0 0 0 0 6 0 0 92177 92183 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia japonica;t__Rickettsia japonica YH 0 0 0 0 0 7514 0 18147 25661 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Candidatus Magnetobacterium;s__Candidatus Magnetobacterium casensis;t__ 2 0 0 0 0 0 0 68154 68183 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus jeddahensis;t__ 11 0 3 5 4 83 0 94869 94975 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium ihumii;t__Clostridium ihumii AP5 0 138 0 63 6 25 0 88260 88492 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus iniae;t__ 11 2 85 56 0 526 0 41059 41739 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus crispatus;t__Lactobacillus crispatus ST1 0 0 2 0 7 278 0 40562 40849 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Microscillaceae;g__Eisenibacter;s__Eisenibacter elegans;t__Eisenibacter elegans DSM 3317 0 2 0 0 0 0 0 80454 80456 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga gingivalis;t__Capnocytophaga gingivalis ATCC 33624 37 2 0 1 9 0 0 53155 53273 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter arcticus;t__Pedobacter arcticus A12 0 31 0 0 6 1 0 84479 84517 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium piperi;t__ 0 0 0 0 1 74 0 86577 86652 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus vanfongensis;t__Algoriphagus vanfongensis DSM 17529 0 2 0 2 26 0 0 94173 94203 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muricauda;s__Muricauda sp. MAR_2010_75;t__ 0 0 0 0 16 26 0 88451 88493 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Agatevirus;s__Bacillus virus Bp8pC;t__Bacillus phage Bp8p-C 0 0 0 0 0 85 0 2943 3028 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Microcoleus;s__Microcoleus sp. PCC 7113;t__ 1 0 19 3 1 0 0 149384 149408 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Simonsiella;s__Simonsiella muelleri;t__Simonsiella muelleri ATCC 29453 0 0 3 4 104 0 0 46610 46721 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia rhipicephali;t__Rickettsia rhipicephali str. 3-7-female6-CWPP 0 1 0 0 0 5199 0 20607 25807 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum cavolei;t__ 0 0 0 0 5 0 0 53961 53966 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter marinus;t__Spongiibacter marinus DSM 19753 0 0 2 6 7 32 0 68596 68643 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma crocodyli;t__Mycoplasma crocodyli MP145 0 0 0 0 0 12 0 18675 18687 k__Bacteria;p__Cyanobacteria;c__Gloeobacteria;o__Gloeobacterales;f__Gloeobacteraceae;g__Gloeobacter;s__Gloeobacter violaceus;t__Gloeobacter violaceus PCC 7421 0 2 0 0 0 0 0 93178 93180 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga sp. oral taxon 329;t__Capnocytophaga sp. oral taxon 329 str. F0087 0 0 0 0 0 37 0 48553 48590 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Pelodictyon;s__Pelodictyon phaeoclathratiforme;t__Pelodictyon phaeoclathratiforme BU-1 0 0 0 0 97 24 0 60243 60364 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus WIV13;t__ 0 0 0 0 0 1 0 582 583 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sphaerochaeta;s__Sphaerochaeta pleomorpha;t__Sphaerochaeta pleomorpha str. Grapes 14 0 2 0 1 0 0 71800 71817 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia duttonii;t__Borrelia duttonii Ly 0 0 0 0 8 30 0 18595 18633 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage DIGNKC;t__ 0 0 0 0 49 319 0 2863 3231 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Betaentomopoxvirus;s__Amsacta moorei entomopoxvirus;t__ 0 0 0 0 0 0 0 4647 4647 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Defluviitaleaceae;g__Defluviitalea;s__Defluviitalea phaphyphila;t__ 0 1 0 0 0 0 0 50514 50515 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter baumannii;t__ 64 44 110 0 6 885 0 85603 86715 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella jamestowniensis;t__ 0 0 8 0 1 1501 0 65204 66714 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Candidatus Paracaedibacteraceae;g__Candidatus Odyssella;s__Candidatus Odyssella thessalonicensis;t__Candidatus Odyssella thessalonicensis L13 0 1 0 0 0 0 0 56913 56916 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema sp. C6A8;t__ 0 0 0 0 0 4 0 57316 57320 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Aneurinibacillus;s__Aneurinibacillus sp. XH2;t__ 0 3 11 44 43 116 0 73079 73296 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. L2-50;t__ 0 444 0 1180 6 42 0 57364 59036 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Capripoxvirus;s__Sheeppox virus;t__ 0 0 0 0 0 0 0 2999 2999 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria seeligeri;t__Listeria seeligeri serovar 1/2b str. SLCC3954 0 5 22 74 0 30 0 55821 55952 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter;s__Maribacter forsetii;t__Maribacter forsetii DSM 18668 4 1 1 0 33 67 0 90181 90287 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Desulfuromonas;s__Desulfuromonas acetoxidans;t__Desulfuromonas acetoxidans DSM 684 0 1 0 1 0 0 0 76468 76470 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema lecithinolyticum;t__Treponema lecithinolyticum ATCC 700332 0 0 0 0 0 8 0 46676 46684 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7822;t__ 0 0 0 0 0 9 0 34850 34996 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga aminisulfidivorans;t__Methylophaga aminisulfidivorans MP 0 1 257 1 0 18 0 64958 65235 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus uberis;t__Streptococcus uberis 0140J 0 2 0 19 0 199 0 36827 37047 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus etheri;t__ 0 0 0 0 0 47 0 132368 132415 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Fulvivirga;s__Fulvivirga imtechensis;t__Fulvivirga imtechensis AK7 0 2 0 1 4 0 0 134319 134326 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus saccharolyticus;t__Enterococcus saccharolyticus subsp. saccharolyticus 0 0 2 14 0 87 0 51713 51816 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella violacea;t__Shewanella violacea DSS12 0 0 73 22 0 261 0 98886 99242 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema denticola;t__Treponema denticola ATCC 35405 0 0 0 0 0 0 0 56864 56864 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Diplorickettsia;s__Diplorickettsia massiliensis;t__Diplorickettsia massiliensis 20B 0 0 1 1 0 0 0 34548 34550 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Nit1virus;s__Bacillus virus NIT1;t__Bacillus phage phiNIT1 0 0 0 0 0 0 0 3112 3112 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Piscirickettsia;s__Piscirickettsia salmonis;t__Piscirickettsia salmonis LF-89 = ATCC VR-1361 0 1 16 1 0 0 0 63679 63697 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas europaea;t__Nitrosomonas europaea ATCC 19718 0 4 15 0 1 22 0 56199 56241 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia obeum;t__Blautia obeum ATCC 29174 28 125 0 321 975 580 0 70350 72379 k__Bacteria;p__Cyanobacteria;c__;o__Pleurocapsales;f__Hyellaceae;g__Pleurocapsa;s__Pleurocapsa sp. PCC 7319;t__ 8 0 23 0 0 0 0 147615 147646 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus urinalis;t__Streptococcus urinalis 2285-97 4 3 41 14 0 158 0 42388 42608 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio zosterae;t__Desulfovibrio zosterae DSM 11974 0 0 0 0 0 9 0 81756 81765 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio sp. AE3004;t__ 0 11 0 3 98 82 0 89214 89408 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus acididurans;t__ 0 0 0 0 22 0 0 92652 92674 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus saprophyticus;t__Staphylococcus saprophyticus subsp. saprophyticus 8 7 2 17 0 400 0 49897 50331 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium aceticum;t__ 0 2 0 0 0 0 0 84024 84026 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Terriglobus;s__Terriglobus saanensis;t__Terriglobus saanensis SP1PR4 0 0 0 0 36 0 0 101868 101904 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium xylanophilum;t__Eubacterium xylanophilum ATCC 35991 0 0 0 23 0 0 0 51371 51394 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter agri;t__Pedobacter agri PB92 0 0 0 0 9 0 0 102112 102121 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Alkaliphilus;s__Alkaliphilus oremlandii;t__Alkaliphilus oremlandii OhILAs 0 7 0 24 5 19 0 62416 62471 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Nautiliales;f__Nautiliaceae;g__Lebetimonas;s__Lebetimonas sp. JH292;t__ 0 0 5 0 13 0 0 32793 32811 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Grimontia;s__Grimontia hollisae;t__ 0 0 73 0 145 0 0 79744 79962 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema pedis;t__Treponema pedis str. T A4 0 0 0 0 0 23 0 57763 57786 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Psychromonadaceae;g__Psychromonas;s__Psychromonas arctica;t__Psychromonas arctica DSM 14288 0 0 96 146 0 31 0 93977 94250 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella washoensis;t__Bartonella washoensis Sb944nv 0 0 0 18 0 78 0 38006 38102 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Granulicatella;s__Granulicatella adiacens;t__Granulicatella adiacens ATCC 49175 4 0 5 43 1 0 0 38353 38406 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira biflexa;t__Leptospira biflexa serovar Patoc 36 0 0 0 0 7 0 77501 77544 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella garinii;t__ 0 0 0 0 0 0 0 4990 4990 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Candidatus Nitrosopumilus sediminis;t__ 0 0 2 0 18 16700 0 17098 33818 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Coprobacillus;s__Coprobacillus sp. D6;t__ 3 294 0 0 169 0 0 76743 77209 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium coryneforme;t__ 0 0 1 0 11 89 0 34998 35099 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp. AR;t__ 0 0 0 0 0 13 0 68709 68722 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus plantarum;t__Lactobacillus plantarum WCFS1 0 0 0 0 0 3 0 480 803 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Candidatus Ruthia;s__Candidatus Ruthia magnifica;t__Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 0 0 1 0 15 0 0 23199 23215 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Sporosarcina;s__Sporosarcina sp. EUR3 2.2.2;t__ 0 0 2 25 76 0 0 69456 69559 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter butzleri;t__Arcobacter butzleri RM4018 0 0 11 2 1 5 0 46806 46825 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella vinsonii;t__Bartonella vinsonii subsp. berkhoffii 0 0 0 27 0 100 0 35926 36053 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella oneidensis;t__Shewanella oneidensis MR-1 0 0 0 0 0 16 0 2759 3232 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira wolbachii;t__Leptospira wolbachii serovar Codice 0 0 0 0 0 71 0 81524 81595 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina flavescens;t__ 0 0 0 0 0 1921 0 63305 65229 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomicrobium;s__Methylomicrobium alcaliphilum;t__Methylomicrobium alcaliphilum 20Z 10 12 20 0 16 7979 0 85328 93365 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Blochmannia;s__Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri;t__ 0 0 1 4 0 0 0 14981 14986 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Avibacterium;s__Avibacterium paragallinarum;t__Avibacterium paragallinarum JF4211 0 0 44 0 279 0 0 57002 57325 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteriaceae bacterium KBS 96;t__ 0 3 0 0 0 0 0 133674 133677 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Lambdina fiscellaria nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 3159 3159 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella sp. W12-1067;t__ 0 8 5 0 0 32 0 33900 33945 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella clarridgeiae;t__Bartonella clarridgeiae 73 0 0 0 29 0 59 0 30366 30454 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus hemicellulosilyticus;t__Bacillus hemicellulosilyticus JCM 9152 0 0 1 6 5 1364 0 89195 90571 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Trichormus;s__Trichormus azollae;t__'Nostoc azollae' 0708 2 0 14 26 35 0 0 107016 107093 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mesoflavibacter;s__Mesoflavibacter zeaxanthinifaciens;t__Mesoflavibacter zeaxanthinifaciens S86 0 0 0 0 7 0 0 73975 73982 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina sp. 2.H.T.1A.6;t__ 0 0 0 0 0 213 0 81153 81366 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus vaginalis;t__Lactobacillus vaginalis DSM 5837 = ATCC 49540 63 47 3 7 0 142 0 35470 35750 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__Plautia stali symbiont;t__ 0 6 14 3084 60 1 0 77542 80707 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides stercoris;t__Bacteroides stercoris ATCC 43183 0 5 0 173 0 3320 0 76645 80143 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9301 0 0 1 0 0 0 1024 31812 32837 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus hydrogenalis;t__Anaerococcus hydrogenalis DSM 7454 4 174 1 0 229 223 0 37059 37690 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia hispanica;t__Borrelia hispanica CRI 0 0 0 0 9 386 0 34973 35368 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage IME-EFm5;t__ 0 0 0 0 0 0 0 845 845 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium 3-2;t__ 0 2 0 138 40 918 0 86331 87429 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium pasteurianum;t__Clostridium pasteurianum BC1 0 0 0 4 17 342 0 99451 99814 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7002;t__ 0 0 15 2 0 0 0 60143 60160 k__Bacteria;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Acidithiobacillus;s__Acidithiobacillus thiooxidans;t__Acidithiobacillus thiooxidans ATCC 19377 0 1 0 0 0 448 0 59628 60077 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Blochmannia;s__Candidatus Blochmannia pennsylvanicus;t__Candidatus Blochmannia pennsylvanicus str. BPEN 0 0 1 1 1 5 0 15825 15833 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Cyprinivirus;s__Cyprinid herpesvirus 2;t__ 0 0 0 0 0 0 0 5806 5806 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter jaachi;t__ 0 0 0 3 0 25 0 37809 37837 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Adhaeribacter;s__Adhaeribacter aquaticus;t__Adhaeribacter aquaticus DSM 16391 0 0 0 0 4 0 0 103306 103310 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium M18-1;t__ 6 17 0 349 776 333 0 114002 115483 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Candidatus Nitrosoarchaeum;s__Candidatus Nitrosoarchaeum limnia;t__Candidatus Nitrosoarchaeum limnia BG20 0 0 0 0 1 0 0 36463 36464 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter johnsonii;t__Acinetobacter johnsonii XBB1 0 0 97 0 0 13 0 9245 11417 k__Bacteria;p__Verrucomicrobia;c__Opitutae;o__Opitutales;f__Opitutaceae;g__Diplosphaera;s__Diplosphaera colitermitum;t__Diplosphaera colitermitum TAV2 0 0 0 0 61 0 0 112946 113007 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus oceani;t__Nitrosococcus oceani ATCC 19707 0 1 2 0 0 0 0 69630 69633 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc punctiforme;t__Nostoc punctiforme PCC 73102 0 0 7 13 14 35 0 164617 164686 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Planktothrix;s__Planktothrix agardhii;t__Planktothrix agardhii NIVA-CYA 126/8 0 0 19 4 16 0 0 95643 95682 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cucurbita yellow vein virus-associated DNA beta;t__ 0 0 0 0 0 0 0 13 13 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus faecium;t__Enterococcus faecium DO 0 0 5 37 3 1165 0 52752 53962 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus piscium;t__Lactococcus piscium MKFS47 2 2 2 21 42 2 0 47811 47882 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides plebeius;t__Bacteroides plebeius DSM 17135 2 5 0 1861 0 3015 0 83498 88381 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter heparinus;t__Pedobacter heparinus DSM 2366 0 2 0 0 21 12 0 103312 103347 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter cuniculorum;t__Campylobacter cuniculorum DSM 23162 0 0 0 2 3 32 0 37249 37286 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus lactis;t__Paenibacillus lactis 154 15 5 0 42 10 96 0 135840 136014 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__;s__Oxalobacteraceae bacterium IMCC9480;t__ 0 0 0 2 23 0 0 87967 87992 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens;s__Nonlabens marinus;t__Nonlabens marinus S1-08 0 0 0 1 51 18 0 58049 58119 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella bacilliformis;t__Bartonella bacilliformis Ver097 0 0 1 29 0 49 0 27711 27790 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc sp. PCC 7107;t__ 0 0 7 28 0 22 0 126539 126596 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia soli;t__ 0 0 2 2 1 14 0 82618 82637 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7424;t__ 0 0 4 5 0 1 0 118843 118853 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus farraginis;t__Lactobacillus farraginis DSM 18382 = JCM 14108 1 0 1 35 40 877 0 55694 56648 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Saccharibacillus;s__Saccharibacillus kuerlensis;t__Saccharibacillus kuerlensis DSM 22868 33 0 0 3 3 1 0 93819 93859 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga thiooxydans;t__Methylophaga thiooxydans DMS010 0 6 14 0 0 10 0 60257 60287 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfococcus;s__Desulfococcus multivorans;t__ 0 0 0 0 0 0 0 89107 89107 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__;s__Methylococcaceae bacterium Sn10-6;t__ 0 0 7 0 0 0 0 90928 90935 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella fallonii;t__Legionella fallonii LLAP-10 0 1 13 0 1 588 0 83028 83631 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides ovatus;t__ 0 4 0 88 0 874 0 128483 129449 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Proteocatella;s__Proteocatella sphenisci;t__Proteocatella sphenisci DSM 23131 0 0 0 0 0 0 0 48086 48086 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cereus;t__Bacillus cereus ATCC 14579 0 3 12 40 53 4315 0 103801 108236 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella;s__Winogradskyella psychrotolerans;t__Winogradskyella psychrotolerans RS-3 0 13 0 4 43 0 0 86269 86329 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Candidatus Berkiella;s__Candidatus Berkiella cookevillensis;t__ 0 0 2 0 0 0 0 59725 59727 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus infantis;t__Bacillus infantis NRRL B-14911 1 0 21 22 77 309 0 97264 97694 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muricauda;s__Muricauda lutaonensis;t__ 0 0 0 0 17 3 0 65465 65485 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio frigidus;t__Desulfovibrio frigidus DSM 17176 0 1 0 0 0 0 0 83654 83655 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia pneumoniae;t__Chlamydophila pneumoniae CWL029 0 0 0 0 0 18 0 24586 24604 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia iniecta;t__ 0 2 1 60 32 93 0 94979 95167 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium aquaticum;t__ 0 9 0 0 1 11583 0 64632 76225 k__Bacteria;p__Nitrospinae;c__Nitrospinia;o__Nitrospinales;f__Nitrospinaceae;g__Nitrospina;s__Nitrospina gracilis;t__Nitrospina gracilis 3/211 1 0 0 0 0 0 0 61137 61138 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Occidentia;s__Occidentia massiliensis;t__ 0 0 0 0 773 0 0 28042 28815 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium disporicum;t__ 19 99 0 26 0 107 0 68607 68858 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus paralvinellae;t__ 0 0 0 0 0 71 0 39083 39154 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Vagococcus;s__Vagococcus lutrae;t__Vagococcus lutrae LBD1 0 0 2 7 17 0 0 36483 36509 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Echinicola;s__Echinicola pacifica;t__Echinicola pacifica DSM 19836 0 0 0 0 2 2 0 108604 108608 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracasei;t__Lactobacillus paracasei ATCC 334 19 0 17 113 54 1125 0 56543 57905 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Vitreoscilla;s__Vitreoscilla sp. SN6;t__ 0 0 0 0 61 0 0 74217 74278 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] cellulolyticum;t__[Clostridium] cellulolyticum H10 0 6 0 3 5 0 0 81360 81374 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Endozoicomonas;s__Endozoicomonas montiporae;t__Endozoicomonas montiporae CL-33 0 5 37 0 0 0 0 108343 108385 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia;s__Zobellia galactanivorans;t__ 0 0 0 1 41 86 0 110306 110434 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinilabiliaceae;g__Alkaliflexus;s__Alkaliflexus imshenetskii;t__Alkaliflexus imshenetskii DSM 15055 0 2 2 0 2 0 0 82271 82277 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio metschnikovii;t__Vibrio metschnikovii CIP 69.14 0 2 21 0 7 169 0 76085 76284 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Avipoxvirus;s__Canarypox virus;t__ 0 0 0 0 0 0 0 7197 7197 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Liberibacter;s__Liberibacter crescens;t__Liberibacter crescens BT-1 2 1 5 6 10 10 0 30059 30093 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc kimchii;t__Leuconostoc kimchii IMSNU 11154 1 0 5 28 22 282 0 39716 40054 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9515 0 0 1 0 0 0 60 34022 34083 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia trachomatis;t__Chlamydia trachomatis D/UW-3/CX 0 0 0 0 0 0 0 20850 20850 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus laterosporus;t__Brevibacillus laterosporus LMG 15441 0 3 16 32 99 176 0 101956 102282 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Flammeovirga;s__Flammeovirga pacifica;t__ 1 0 0 2 0 0 0 130802 130805 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Mesta yellow vein mosaic virus alphasatellite;t__Sida yellow vein mosaic alphasatellite 0 0 0 0 0 0 0 27 27 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Psychromonadaceae;g__Psychromonas;s__Psychromonas ingrahamii;t__Psychromonas ingrahamii 37 0 0 39 18 0 0 0 91134 91191 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella paramesenteroides;t__Weissella paramesenteroides ATCC 33313 1 0 3 76 39 16 0 39038 39173 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Thermodesulfovibrio;s__Thermodesulfovibrio thiophilus;t__Thermodesulfovibrio thiophilus DSM 17215 0 0 0 0 0 0 0 37384 37384 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Faecalicatena;s__Faecalicatena contorta;t__ 0 0 0 0 1 1 0 110536 110538 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P078;t__ 0 0 0 0 0 124 0 965 1089 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Flectobacillus;s__Flectobacillus major;t__Flectobacillus major DSM 103 3 4 0 4 3 0 0 124371 124385 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus ligniniphilus;t__ 0 0 4 6 5 38 0 76708 76761 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Megamonas;s__Megamonas hypermegale;t__Megamonas hypermegale DSM 1672 0 0 0 0 0 0 0 42979 42979 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium ulcerans;t__Fusobacterium ulcerans ATCC 49185 1 0 0 0 11 17 0 69551 69580 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter bouvetii;t__Acinetobacter bouvetii DSM 14964 = CIP 107468 13 4 3 1 9 381 0 66941 67352 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus massilioanorexius;t__Bacillus massilioanorexius AP8 1 1 1 2 6 22 0 91520 91553 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Chitinophaga;s__Chitinophaga pinensis;t__Chitinophaga pinensis DSM 2588 14 0 0 0 31 0 0 182501 182546 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Kinetoplastibacterium;s__Candidatus Kinetoplastibacterium desouzaii;t__Candidatus Kinetoplastibacterium desouzaii TCC079E 0 0 36 0 0 0 0 16626 16662 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosalsum;s__Methanosalsum zhilinae;t__Methanosalsum zhilinae DSM 4017 0 0 0 0 12 0 0 42756 42768 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella timonensis;t__Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 0 0 0 75 5 3410 0 58851 62341 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. OSY-SE;t__ 0 0 0 5 1 73 0 138170 138250 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma capricolum;t__Mycoplasma capricolum subsp. capricolum 0 0 0 0 0 38 0 20162 20200 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__;g__;s__Rhodobacterales bacterium HTCC2255;t__ 1 5 1 15 0 0 0 45747 45769 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter anaerophilus;t__ 0 0 11 0 0 0 0 64924 64935 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio scophthalmi;t__ 0 2 41 0 12 415 0 94129 94599 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gelidibacter;s__Gelidibacter mesophilus;t__Gelidibacter mesophilus DSM 14095 0 0 0 1 703 0 0 87802 88506 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. KLE 1755;t__ 4 0 0 878 43 55 0 131063 132043 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Providencia;s__Providencia rettgeri;t__ 90 1 22 208 0 0 0 95292 95613 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia sp. KLE 1732;t__ 1 101 0 219 328 64 0 70201 70914 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella marina;t__Shewanella marina JCM 15074 0 0 6 2 0 31 0 88312 88351 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia toletana;t__Erwinia toletana DAPP-PG 735 0 0 3 34 110 51 0 103607 103805 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteriaceae bacterium KBS 89;t__ 0 0 0 0 27 0 0 120144 120171 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia australis;t__Rickettsia australis str. Cutlack 0 1 0 0 1 676 0 25785 26463 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas molluscorum;t__Aeromonas molluscorum 848 0 24 3 0 0 135 0 83971 84133 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Rivularia;s__Rivularia sp. PCC 7116;t__ 0 0 5 22 2 0 0 173940 173969 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella oakridgensis;t__Legionella oakridgensis ATCC 33761 = DSM 21215 0 0 9 0 0 39 0 54411 54459 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium;s__Janthinobacterium agaricidamnosum;t__Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 0 2 5 5 32 30 0 118477 118551 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Bulleidia;s__Bulleidia extructa;t__Bulleidia extructa W1219 15 24 0 0 5 0 0 28317 28361 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum A 0 0 0 3 25 58 0 77651 77738 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Ishikawaella;s__Candidatus Ishikawaella capsulata;t__Candidatus Ishikawaella capsulata Mpkobe 0 0 2 10 2 0 0 14897 14911 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Altererythrobacter;s__Altererythrobacter sp. Root672;t__ 0 1 1 11 16 8 0 73804 73841 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Candidatus Thioglobus;s__Candidatus Thioglobus singularis;t__Candidatus Thioglobus singularis PS1 0 0 2 0 3 6 0 34271 34282 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__;f__;g__;s__delta proteobacterium NaphS2;t__ 0 41 1 0 0 0 0 129556 129598 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Coprobacter;s__Coprobacter secundus;t__ 0 0 2 162 0 0 0 82528 82692 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus succinus;t__ 0 4 1 18 0 184 0 54706 54913 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pandoraea;s__Pandoraea pnomenusa;t__ 0 0 8 39 111 0 0 107623 107785 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter aceti;t__Acetobacter aceti NBRC 14818 0 0 1 0 36 37 0 70599 70674 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__Haemophilus influenzae;t__Haemophilus influenzae Rd KW20 0 0 44 0 87 4 0 36465 36600 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Anabaena;s__Anabaena cylindrica;t__Anabaena cylindrica PCC 7122 1 0 14 67 99 92 0 127643 127916 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus alimentarius;t__ 0 0 0 0 14 0 0 60628 60642 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Oxobacter;s__Oxobacter pfennigii;t__ 0 0 0 2 1 0 0 90082 90085 k__Bacteria;p__Ignavibacteriae;c__Ignavibacteria;o__Ignavibacteriales;f__Ignavibacteriaceae;g__Ignavibacterium;s__Ignavibacterium album;t__Ignavibacterium album JCM 16511 0 0 0 0 0 0 0 73179 73179 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium DRI-13;t__ 0 0 19 52 0 0 0 72722 72793 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Candidatus Nitrosoarchaeum;s__Candidatus Nitrosoarchaeum koreensis;t__Candidatus Nitrosoarchaeum koreensis MY1 0 0 0 0 0 55 0 32098 32153 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus halophilus;t__Nitrosococcus halophilus Nc 4 0 0 5 0 0 20 0 81563 81588 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides;s__Parabacteroides johnsonii;t__Parabacteroides johnsonii CL02T12C29 93 48 0 1751 0 57 0 90252 92201 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium tyrobutyricum;t__ 0 0 0 0 9 19 0 61404 61432 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium spiritivorum;t__Sphingobacterium spiritivorum ATCC 33861 0 716 0 0 3 88 0 100996 101803 k__BacteriaPlasmid;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Ilyobacter;s__Ilyobacter polytropus;t__Ilyobacter polytropus DSM 2926 0 0 0 0 0 0 0 21312 21715 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia;s__Shimia sp. SK013;t__ 0 2 1 0 33 0 0 80900 80943 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella lansingensis;t__Legionella lansingensis DSM 19556 = ATCC 49751 0 0 4 1 0 31 0 58086 58122 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Entomoplasma;s__Entomoplasma lucivorax;t__Entomoplasma lucivorax ATCC 49196 0 0 7 1 3 2 0 21984 21997 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella dentalis;t__Prevotella dentalis DSM 3688 0 1 0 0 14 107 0 66696 66818 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium senegalense;t__Clostridium senegalense JC122 0 4 0 0 1 28 0 77034 77067 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Molluscipoxvirus;s__Molluscum contagiosum virus;t__Molluscum contagiosum virus subtype 1 0 0 0 0 0 0 0 3805 3805 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Paraprevotella;s__Paraprevotella xylaniphila;t__Paraprevotella xylaniphila YIT 11841 0 10 0 501 244 0 0 74853 75608 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Tipula oleracea nudivirus;t__ 0 0 0 0 0 0 0 2914 2914 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides cellulosilyticus;t__ 0 4 0 4 0 0 0 141688 141696 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium formosense;t__ 0 1 0 0 21 78 0 87177 87277 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus;s__Aerococcus viridans;t__ 1 2 47 469 4 0 0 43402 43997 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus chthonoplastes;t__Coleofasciculus chthonoplastes PCC 7420 0 0 27 11 0 0 0 172727 172765 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia persica;t__Borrelia persica No12 0 0 0 1 8 34 0 35201 35244 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__;s__Coxiella-like endosymbiont;t__ 0 0 0 0 0 0 0 34676 34676 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Avipoxvirus;s__Pigeonpox virus;t__ 0 0 0 0 0 6 0 5641 5647 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Apocheima cinerarium nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2477 2477 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Glittering;t__ 0 0 0 0 0 0 0 984 984 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Moellerella;s__Moellerella wisconsensis;t__Moellerella wisconsensis ATCC 35017 5 0 7 115 24 0 0 65706 65861 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Mucinivorans;s__Mucinivorans hirudinis;t__ 0 0 0 4 8 0 0 62972 62984 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomarinum;s__Methylomarinum vadi;t__ 0 3 16 0 30 0 0 86654 86703 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planococcus;s__Planococcus antarcticus;t__Planococcus antarcticus DSM 14505 0 0 32 100 8 0 0 75170 75310 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Aneurinibacillus;s__Aneurinibacillus tyrosinisolvens;t__ 0 3 2 37 3 5 0 113569 113619 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium tunisiense;t__Clostridium tunisiense TJ 19 0 0 0 5 8 0 86027 86059 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides coprocola;t__Bacteroides coprocola DSM 17136 17 4 0 2088 0 1656 0 81898 85663 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Ornithinibacillus;s__Ornithinibacillus contaminans;t__ 0 0 0 0 0 0 0 67693 67693 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. HUN102;t__ 0 26 0 42 1 346 0 65942 66357 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus vini;t__Lactobacillus vini DSM 20605 0 1 3 11 2 546 0 42935 43498 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Myroides;s__Myroides profundi;t__ 0 1 0 0 55 197 0 81037 81290 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma mobile;t__Mycoplasma mobile 163K 0 0 0 0 0 0 0 15541 15541 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Spodoptera litura nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2786 2786 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium subsaxonicum;t__Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 0 1 0 0 5 13 0 92522 92541 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Gomontiellaceae;g__Crinalium;s__Crinalium epipsammum;t__Crinalium epipsammum PCC 9333 0 0 19 5 0 0 0 106287 106311 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter radioresistens;t__Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 10 3 5 1 103 1357 0 61948 63427 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Arsenophonus;s__Arsenophonus endosymbiont of Nilaparvata lugens;t__Arsenophonus endosymbiont str. Hangzhou of Nilaparvata lugens 0 4 5 35 11 163 0 58821 59039 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter winghamensis;t__Helicobacter winghamensis ATCC BAA-430 0 0 0 3 0 17 0 32976 32996 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga granulosa;t__Capnocytophaga granulosa ATCC 51502 4 25 0 0 3 301 0 54419 54752 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium russii;t__Fusobacterium russii ATCC 25533 0 0 0 0 0 14 0 38607 38621 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter corcagiensis;t__ 0 0 0 0 4 32 0 33389 33425 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia felis;t__Chlamydia felis Fe/C-56 0 0 0 0 0 5 0 23319 23324 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Agrotis segetum granulovirus;t__ 0 0 0 0 0 0 0 2633 2633 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Hapalosiphonaceae;g__Fischerella;s__Fischerella thermalis;t__Fischerella thermalis PCC 7521 0 0 47 27 18 8 0 108403 108503 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Acetobacterium;s__Acetobacterium woodii;t__Acetobacterium woodii DSM 1030 0 25 0 0 24 34 0 80812 80895 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Gammabaculovirus;s__Neodiprion lecontei nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 1631 1631 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter aquaticus;t__Psychrobacter aquaticus CMS 56 0 0 1 0 8 119 0 64127 64255 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia amblyommatis;t__Rickettsia amblyommatis str. Darkwater 0 0 0 0 0 2719 0 25925 28644 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Dactylococcopsis;s__Dactylococcopsis salina;t__Dactylococcopsis salina PCC 8305 1 0 7 9 1 0 0 75602 75620 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta odontotermitis;t__ 0 0 0 0 0 0 0 76005 76005 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus sp. HUN007;t__ 0 1 0 11 24 90 0 84012 84138 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium sp. YR460;t__ 0 1 0 0 28 208 0 92295 92532 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Polaromonas;s__Polaromonas naphthalenivorans;t__Polaromonas naphthalenivorans CJ2 0 0 0 6 64 14 0 88121 88205 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus terrigena;t__Paenibacillus terrigena DSM 21567 0 0 0 1 5 31 0 127113 127150 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Aphanizomenonaceae;g__Aphanizomenon;s__Aphanizomenon flos-aquae;t__Aphanizomenon flos-aquae NIES-81 11 0 2 1052 99 0 0 111847 113011 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides vulgatus;t__Bacteroides vulgatus ATCC 8482 2 4 0 63 0 1169 0 102025 103263 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus halodenitrificans;t__ 0 0 19 4 192 48 0 77135 77398 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus sp. BV3C26;t__ 6 569 55 0 171 951 0 36639 38391 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile;t__Clostridioides difficile 630 0 33 0 18 79 0 0 85133 85805 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix sp. PCC 7507;t__ 0 0 11 136 0 0 0 140317 140464 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Liberibacter;s__Candidatus Liberibacter americanus;t__Candidatus Liberibacter americanus str. Sao Paulo 0 0 0 0 4 48 0 23852 23904 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium haifense;t__Chryseobacterium haifense DSM 19056 0 183 0 0 45 700 0 55186 56114 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella oralis;t__Prevotella oralis ATCC 33269 0 2 0 24 0 41 0 56599 56666 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma ovis;t__Mycoplasma ovis str. Michigan 0 0 0 0 0 4 0 14046 14050 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfomicrobiaceae;g__Desulfomicrobium;s__Desulfomicrobium baculatum;t__Desulfomicrobium baculatum DSM 4028 0 0 0 4 0 0 0 78849 78853 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Euproctis pseudoconspersa nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2825 2825 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Flavihumibacter;s__Flavihumibacter petaseus;t__Flavihumibacter petaseus NBRC 106054 0 0 0 0 0 0 0 113828 113828 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium autoethanogenum;t__Clostridium autoethanogenum DSM 10061 0 1 0 0 0 97 0 86946 87044 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Candidatus Paracaedibacteraceae;g__Candidatus Paracaedibacter;s__Candidatus Paracaedibacter symbiosus;t__ 0 0 0 0 0 0 0 1164 1166 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria acuminata;t__Oscillatoria acuminata PCC 6304 1 0 23 10 2 2 0 153750 153788 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Cellvibrio;s__Cellvibrio sp. BR;t__ 68 0 22 2 3 0 0 96853 96948 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Coxiella;s__Coxiella endosymbiont of Amblyomma americanum;t__ 0 0 1 0 0 0 0 13137 13138 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter rudis;t__ 4 106 1 0 3 38 0 78802 78954 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridiisalibacter;s__Clostridiisalibacter paucivorans;t__Clostridiisalibacter paucivorans DSM 22131 0 0 0 1 0 0 0 64642 64643 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Galbibacter;s__Galbibacter marinus;t__ 0 16 0 0 565 0 0 70716 71297 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Aphanizomenonaceae;g__Dolichospermum;s__Dolichospermum circinale;t__Dolichospermum circinale AWQC310F 0 0 3 33 8 0 0 86990 87034 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Dialister;s__Dialister micraerophilus;t__Dialister micraerophilus DSM 19965 11 359 0 0 3 6 0 24681 25060 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter sp. L;t__ 0 0 12 3 1 213 0 58684 58913 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum acetoxidans;t__Desulfotomaculum acetoxidans DSM 771 0 11 0 0 9 8 0 90884 90912 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus sp. MIT 0603;t__ 2 0 0 1 0 59 0 34972 35034 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Flexistipes;s__Flexistipes sinusarabici;t__Flexistipes sinusarabici DSM 4947 0 0 0 0 4 0 0 50527 50531 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Lymphocystivirus;s__Lymphocystis disease virus Sa;t__ 0 0 0 0 0 0 0 4170 4170 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia asembonensis;t__ 0 1 0 0 3 2690 0 24245 26939 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__;s__Moumouvirus;t__Acanthamoeba polyphaga moumouvirus 0 0 0 0 0 0 0 20426 20426 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zunongwangia;s__Zunongwangia profunda;t__Zunongwangia profunda SM-A87 0 60 1 0 800 0 0 101702 102563 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Kinetoplastibacterium;s__Kinetoplastibacterium blastocrithidii;t__Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis) 0 2 35 0 0 129 0 16234 16400 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia trachomatis;t__Chlamydia trachomatis 434/Bu 0 0 0 0 0 0 11745 9031 20776 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Sulfuricellales;f__Sulfuricellaceae;g__Sulfuricella;s__Sulfuricella denitrificans;t__Sulfuricella denitrificans skB26 2 1 10 0 0 0 0 62598 62611 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Tolypothrichaceae;g__Tolypothrix;s__Tolypothrix sp. PCC 7601;t__ 0 0 6 91 0 22 0 198886 199005 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 8801;t__ 0 0 5 1 0 0 0 93582 93588 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella;s__Niabella aurantiaca;t__Niabella aurantiaca DSM 17617 0 0 0 0 24 0 0 118428 118452 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__Short-finned eel ranavirus;t__ 0 0 0 0 7 110 0 2422 2539 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfatator;s__Thermodesulfatator indicus;t__Thermodesulfatator indicus DSM 15286 0 0 0 0 3 0 0 46441 46444 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Peanut witches'-broom phytoplasma;t__Peanut witches'-broom phytoplasma NTU2011 0 0 0 0 0 4 0 11219 11223 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella tucsonensis;t__ 0 0 1 0 36 99 0 66958 67094 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9107 0 0 1 1 0 16 52 33907 33977 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella bivia;t__Prevotella bivia DSM 20514 17 2 0 556 8 1434 0 48362 50379 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus salivarius;t__ 6 7 2 39 0 781 0 42936 43778 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella bissettii;t__Borreliella bissettii DN127 0 0 0 0 0 146 0 9880 10026 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus kribbensis;t__Bacillus kribbensis DSM 17871 0 0 0 0 0 3 0 100759 100762 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium paraputrificum;t__Clostridium paraputrificum AGR2156 0 6 0 4 0 11 0 71052 71073 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus minor;t__Streptococcus minor DSM 17118 0 0 1 2 0 15 0 38479 38497 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Candidatus Phytoplasma australiense;t__ 0 0 0 0 1 26 0 17572 17599 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma orale;t__Mycoplasma orale ATCC 23714 0 0 0 0 0 21 0 14151 14172 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus argentinicus;t__ 0 0 2 4 63 73 0 34967 35110 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Anaeroarcus;s__Anaeroarcus burkinensis;t__Anaeroarcus burkinensis DSM 6283 0 0 1 0 0 0 0 66718 66719 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli IAI39 0 31 23 488 341 0 0 101054 102641 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Thermonemataceae;g__Thermonema;s__Thermonema rossianum;t__Thermonema rossianum DSM 10300 0 0 0 0 0 0 0 59029 59029 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Salinimicrobium;s__Salinimicrobium xinjiangense;t__Salinimicrobium xinjiangense DSM 19287 0 0 0 0 7 14 0 75004 75025 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Aneurinibacillus;s__Aneurinibacillus terranovensis;t__Aneurinibacillus terranovensis DSM 18919 0 0 0 0 0 0 0 84525 84525 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter soli;t__ 15 4 5 2 9 110 0 68620 68765 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc sp. PCC 7120;t__ 0 0 8 24 0 0 0 128243 128275 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium lundense;t__Clostridium lundense DSM 17049 8 91 0 66 3 8 0 94760 94936 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium nucleatum;t__Fusobacterium nucleatum subsp. nucleatum 2 0 0 0 0 42 877 42568 43489 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O104:H4 188 264 157 381 6772 3 6896 89042 105461 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma bovoculi;t__Mycoplasma bovoculi M165/69 0 0 0 0 0 25 0 15179 15204 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Colwellia;s__Colwellia psychrerythraea;t__Colwellia psychrerythraea 34H 0 0 35 11 65 0 0 107352 107463 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum thermocisternum;t__Desulfotomaculum thermocisternum DSM 10259 0 2 33 0 2 0 0 52882 52919 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia massiliae;t__Rickettsia massiliae str. AZT80 0 0 0 0 0 4334 0 20937 25271 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia coriaceae;t__Borrelia coriaceae Co53 0 0 0 0 0 0 0 16131 16201 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Anaerostipes;s__Anaerostipes caccae;t__Anaerostipes caccae DSM 14662 2 45 0 1101 220 0 0 70673 72041 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera genomosp. type_1;t__Megasphaera genomosp. type_1 str. 28L 20 353 0 0 2 64 0 34022 34461 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus pobuzihii;t__Lactobacillus pobuzihii E100301 = KCTC 13174 0 1 1 7 0 397 0 46313 46719 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella oryzae;t__Prevotella oryzae DSM 17970 0 4 0 0 1 46 0 65705 65756 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnospira;s__Lachnospira multipara;t__Lachnospira multipara ATCC 19207 0 7 0 5 20 0 0 57308 57340 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Amphibacillus;s__Amphibacillus xylanus;t__Amphibacillus xylanus NBRC 15112 8 58 4 3 64 0 0 51252 51389 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfobulbus;s__Desulfobulbus japonicus;t__Desulfobulbus japonicus DSM 18378 0 0 0 1 3 4 0 115637 115645 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Tyzzerella;s__Tyzzerella nexilis;t__Tyzzerella nexilis DSM 1787 68 153 0 325 606 0 0 75416 76634 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Propionispira;s__Propionispira raffinosivorans;t__Propionispira raffinosivorans DSM 20765 0 0 118 4 0 0 0 82390 82512 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Gemella;s__Gemella bergeri;t__Gemella bergeriae ATCC 700627 0 2 0 2 0 0 0 31857 31861 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kimchiensis;t__ 0 0 2 1 3 184 0 53646 53844 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Odoribacteraceae;g__Butyricimonas;s__Butyricimonas synergistica;t__Butyricimonas synergistica DSM 23225 0 1 0 18 10 0 0 95344 95373 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix sp. 336/3;t__ 0 0 0 33 0 14 0 125618 125665 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc sp. PCC 7524;t__ 1 0 14 45 19 97 0 132524 132700 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Providencia;s__Providencia sneebia;t__Providencia sneebia DSM 19967 0 0 0 0 0 0 0 441 450 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella kandleri;t__ 0 0 1 3 1 13 0 26528 26546 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__;s__Sphingobacteriaceae bacterium DW12;t__ 83 0 0 0 30 0 0 106074 106187 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Proteiniphilum;s__Proteiniphilum acetatigenes;t__Proteiniphilum acetatigenes DSM 18083 0 2 0 4 0 0 0 95440 95446 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas tunicata;t__Pseudoalteromonas tunicata D2 0 1 67 13 0 88 0 99398 99567 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas sp. MED121;t__ 0 1 47 6 0 0 0 102283 102337 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus subterraneus;t__ 0 0 0 1 7 19 0 77581 77608 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus gobiensis;t__ 0 0 13 13 49 1 0 91862 91938 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Endozoicomonas;s__Endozoicomonas elysicola;t__ 0 7 72 10 0 75 0 111567 111731 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus vulcanius;t__Methanocaldococcus vulcanius M7 0 0 0 0 0 48 0 34878 34926 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfatator;s__Thermodesulfatator atlanticus;t__Thermodesulfatator atlanticus DSM 21156 0 0 0 0 0 2 0 45936 45938 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Rudanella;s__Rudanella lutea;t__Rudanella lutea DSM 19387 0 1 0 1 6 0 0 130850 130858 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemanella;s__Holdemanella biformis;t__Holdemanella biformis DSM 3989 0 78 0 0 12 0 0 47917 48007 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter bemidjiensis;t__Geobacter bemidjiensis Bem 0 0 4 0 0 0 0 92298 92302 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Nitrobacter;s__Nitrobacter winogradskyi;t__Nitrobacter winogradskyi Nb-255 0 0 1 2 27 29 0 67982 68041 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus picturae;t__ 2 0 6 57 176 21 0 73233 73495 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia schinkii;t__Blautia schinkii DSM 10518 19 38 0 480 206 1 0 132680 133424 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Algicola;s__Algicola sagamiensis;t__Algicola sagamiensis DSM 14643 0 0 3 3 3 0 0 86699 86708 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Thermovirga;s__Thermovirga lienii;t__Thermovirga lienii DSM 17291 0 0 0 0 0 0 0 39355 39355 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema primitia;t__Treponema primitia ZAS-1 0 0 0 0 0 3 63 75374 75440 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mangrovimonas;s__Mangrovimonas sp. ST2L12;t__ 0 1 0 0 23 9 0 76434 76467 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella philomiragia;t__Francisella philomiragia subsp. philomiragia ATCC 25017 0 0 2 1 0 839 0 40073 40915 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio alginolyticus;t__ 0 0 16 0 12 153 2 84333 84516 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Holosporaceae;g__;s__endosymbiont of Acanthamoeba sp. UWC8;t__ 0 0 0 0 0 0 0 32305 32305 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella fairfieldensis;t__Legionella fairfieldensis ATCC 49588 0 0 4 0 0 395 0 52510 52909 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus acidipiscis;t__Lactobacillus acidipiscis KCTC 13900 0 0 2 93 6 411 0 44290 44802 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina barkeri;t__Methanosarcina barkeri MS 0 0 0 0 0 41 0 90623 90664 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus doucetiae;t__ 5 0 23 133 13 192 0 83538 83904 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Flavobacterium phage FCL-2;t__ 0 0 0 0 0 0 0 942 942 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia parkeri;t__Borrelia parkeri SLO 0 0 0 0 7 71 0 18275 18353 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Rhinolophus hildebrandtii polyomavirus 1;t__ 0 0 0 0 0 0 0 101 101 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio inopinatus;t__Desulfovibrio inopinatus DSM 10711 0 0 0 1 0 2 0 115045 115048 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Peridroma alphabaculovirus;t__ 0 0 0 0 0 0 0 3022 3022 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Amphibacillus;s__Amphibacillus jilinensis;t__Amphibacillus jilinensis Y1 37 0 0 0 13 0 0 76419 76469 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__endosymbiont of Bathymodiolus sp.;t__ 0 0 0 0 0 0 0 12249 12249 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. X1(2014);t__ 0 2 10 26 257 950 0 67208 68453 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Avipoxvirus;s__Turkeypox virus;t__ 0 0 0 0 0 0 0 3770 3770 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Candidatus Baumannia cicadellinicola;t__ 0 0 8 0 0 0 4 12641 12653 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma testudinis;t__Mycoplasma testudinis ATCC 43263 45 0 0 0 0 7 0 26397 26449 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. AS23.2;t__ 0 0 0 2 12 0 0 173298 173312 k__Bacteria;p__Fibrobacteres;c__Chitinivibrionia;o__Chitinivibrionales;f__Chitinivibrionaceae;g__Chitinivibrio;s__Chitinivibrio alkaliphilus;t__Chitinivibrio alkaliphilus ACht1 0 0 0 0 0 0 0 51639 51639 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__Ruminiclostridium thermocellum;t__Ruminiclostridium thermocellum ATCC 27405 8 2 112 35 5 16 0 76688 76866 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia amylovora;t__Erwinia amylovora CFBP1430 0 2 20 191 43 103 0 75752 76111 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Teredinibacter;s__Teredinibacter sp. 1162T.S.0a.05;t__ 0 0 11 9 7 7 0 88065 88099 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium kutscheri;t__ 0 0 33 7 0 45 0 46996 47081 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio alcoholivorans;t__Desulfovibrio alcoholivorans DSM 5433 0 0 1 0 0 56 0 102396 102453 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus orientis;t__Desulfosporosinus orientis DSM 765 0 5 0 1 75 203 0 116977 117261 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus sp. I2;t__ 0 0 0 0 8 5 0 105560 105573 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Enterovibrio;s__Enterovibrio calviensis;t__Enterovibrio calviensis DSM 14347 0 0 5 0 17 0 80 109786 109888 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__;s__[Eubacterium] sulci;t__Eubacterium sulci ATCC 35585 2 8 0 41 2 10 0 34724 34787 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Salsuginibacillus;s__Salsuginibacillus kocurii;t__Salsuginibacillus kocurii DSM 18087 0 0 0 0 0 0 0 76585 76585 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thioalkalimicrobium;s__Thioalkalimicrobium microaerophilum;t__ 0 0 5 0 0 0 0 61685 61690 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia;s__Roseburia intestinalis;t__Roseburia intestinalis L1-82 5 50 0 1779 847 1139 0 83048 86868 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 7;t__ 0 0 0 0 0 0 0 397 397 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena sp. PCC 7367;t__ 0 0 4 6 0 4 0 91126 91140 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium hydrogeniformans;t__Clostridium hydrogeniformans DSM 21757 0 0 0 0 1 2 0 81953 81956 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus parabrevis;t__Lactobacillus parabrevis ATCC 53295 0 0 1 1 13 646 0 51745 52414 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinospirillum;s__Marinospirillum insulare;t__Marinospirillum insulare DSM 21763 0 2 3 3 0 0 0 58209 58217 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Dechloromonas;s__Dechloromonas agitata;t__Dechloromonas agitata is5 0 2 64 0 34 0 0 72417 72517 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia;s__Roseburia inulinivorans;t__Roseburia inulinivorans DSM 16841 22 145 1 2651 817 2752 0 74244 80632 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus polymyxa;t__Paenibacillus polymyxa SC2 0 0 0 0 0 0 0 10201 10202 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__;f__;g__;s__delta proteobacterium MLMS-1;t__ 4 0 20 0 0 0 0 120130 120154 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Cellulophaga;s__Cellulophaga baltica;t__Cellulophaga baltica 18 0 0 3 0 54 421 0 92224 92702 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter oralis;t__ 0 0 0 0 0 17 0 42536 42553 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus chitinolyticus;t__Paenibacillus chitinolyticus NBRC 15660 0 0 0 2 3 19 0 128563 128587 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas distincta;t__ 0 0 31 1 0 609 0 89955 90596 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Paludibacteraceae;g__Paludibacter;s__Paludibacter propionicigenes;t__Paludibacter propionicigenes WB4 0 0 1 4 0 0 0 73705 73710 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus flavefaciens;t__Ruminococcus flavefaciens ATCC 19208 0 0 0 0 6 5 84 71459 71554 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Louse Fly Virus 10;t__ 0 0 0 0 0 0 0 230 230 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Aliiglaciecola;s__Aliiglaciecola lipolytica;t__Aliiglaciecola lipolytica E3 0 1 74 13 32 0 0 96578 96698 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema saccharophilum;t__Treponema saccharophilum DSM 2985 1 0 0 0 0 0 0 68971 68972 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Gilvimarinus;s__Gilvimarinus chinensis;t__Gilvimarinus chinensis DSM 19667 0 0 18 20 4 14 0 81255 81311 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter hyointestinalis;t__Campylobacter hyointestinalis subsp. hyointestinalis 0 0 0 0 5 26 0 35036 35067 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella oneidensis;t__Shewanella oneidensis MR-1 0 0 47 36 0 532 0 98781 99396 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. PCC 7375;t__ 0 0 5 2 0 0 0 188410 188417 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Ornithobacterium;s__Ornithobacterium rhinotracheale;t__Ornithobacterium rhinotracheale DSM 15997 296 0 0 0 25 0 0 47662 47983 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus okuhidensis;t__ 0 0 0 1 3 8 0 81683 81695 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum nigrificans;t__Desulfotomaculum nigrificans CO-1-SRB 0 11 21 9 2 212 0 57590 57845 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Cellulosilyticum;s__Cellulosilyticum ruminicola;t__Cellulosilyticum ruminicola JCM 14822 0 0 2 0 1 0 0 80852 80855 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoclostridium;s__Peptoclostridium acidaminophilum;t__Peptoclostridium acidaminophilum DSM 3953 0 17 0 51 10 19 0 44828 44925 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Gorillibacterium;s__Gorillibacterium sp. SN4;t__ 0 0 0 2 9 0 0 105241 105252 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia tamurae;t__ 0 1 0 0 2 6174 0 22838 29015 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Deferribacter;s__Deferribacter desulfuricans;t__Deferribacter desulfuricans SSM1 0 0 0 0 2 0 0 44685 44687 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus acidiproducens;t__Bacillus acidiproducens DSM 23148 0 72 1 0 0 55 0 65932 66060 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus barengoltzii;t__Paenibacillus barengoltzii G22 0 0 0 25 9 76 0 94817 94927 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina siciliae;t__Methanosarcina siciliae T4/M 0 0 0 0 0 198 0 100153 100351 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium saccharoperbutylacetonicum;t__Clostridium saccharoperbutylacetonicum N1-4 6 0 0 0 6 282 0 130311 130605 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus ginsengihumi;t__Paenibacillus ginsengihumi DSM 21568 0 0 0 0 132 100 0 112946 113178 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. mt5;t__ 0 0 0 0 0 2 0 50843 50845 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Aquaspirillum;s__Aquaspirillum serpens;t__Aquaspirillum serpens DSM 68 0 0 5 0 15 0 0 52013 52033 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium cylindrosporum;t__Clostridium cylindrosporum DSM 605 0 2 0 0 0 1 0 54645 54648 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides propionicifaciens;t__Bacteroides propionicifaciens DSM 19291 = JCM 14649 0 16 0 9 0 38 0 52499 52562 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc lactis;t__ 0 0 6 25 30 0 0 34689 34750 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomicrobium;s__Methylomicrobium alcaliphilum;t__Methylomicrobium alcaliphilum 20Z 0 0 0 0 0 0 0 2533 2568 k__BacteriaPlasmid;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Finegoldia;s__Finegoldia magna;t__Finegoldia magna ATCC 29328 0 0 0 0 0 0 0 3783 3783 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira sp. MA2-6;t__ 0 3 16 0 25 396 0 53094 53534 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Tatlockia;s__Tatlockia micdadei;t__ 0 0 13 0 144 0 0 66043 66200 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Uliginosibacterium;s__Uliginosibacterium gangwonense;t__Uliginosibacterium gangwonense DSM 18521 0 0 5 0 0 0 0 100343 100348 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Nautiliales;f__Nautiliaceae;g__Nautilia;s__Nautilia profundicola;t__Nautilia profundicola AmH 0 0 9 0 0 0 0 33519 33528 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella copri;t__Prevotella copri DSM 18205 0 2 0 85 0 59 0 69874 70020 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella grahamii;t__Bartonella grahamii as4aup 0 0 0 31 0 0 0 46795 46826 k__Viruses;p__unassigned viruses;c__Hytrosaviridae;o__;f__;g__Muscavirus;s__Musca hytrovirus;t__Musca domestica salivary gland hypertrophy virus 0 0 0 0 0 0 0 2485 2485 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Acetoanaerobium;s__Acetoanaerobium sticklandii;t__ 0 2 0 10 12 0 0 54285 54309 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Echinicola;s__Echinicola vietnamensis;t__Echinicola vietnamensis DSM 17526 0 6 0 3 48 0 0 112103 112160 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira haloalkaliphila;t__Ectothiorhodospira haloalkaliphila ATCC 51935 0 0 8 2 9 27 0 68794 68840 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Lyngbya;s__Lyngbya aestuarii;t__Lyngbya aestuarii BL J 0 0 5 7 0 0 0 136537 136549 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya boryana;t__Leptolyngbya boryana PCC 6306 0 0 8 17 0 0 0 145160 145185 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus sp. ING2-D1G;t__ 0 33 0 0 2 10 0 31991 32036 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides;s__Parabacteroides goldsteinii;t__Parabacteroides goldsteinii DSM 19448 = WAL 12034 0 3 0 5 0 0 0 128991 128999 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-26652;t__ 0 0 0 0 0 0 0 94642 94642 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus subtilis;t__Bacillus subtilis subsp. subtilis 63 34 25 25 83 466 0 83608 84312 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella sp. P1-14-1;t__ 0 0 10 3 0 16 0 98021 98050 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Aphanothecaceae;g__Halothece;s__Halothece sp. PCC 7418;t__ 1 0 85 1 0 0 0 83496 83583 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfurimonas;s__Sulfurimonas hongkongensis;t__ 0 0 2 3 0 0 0 45985 45990 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium deserti;t__ 0 0 0 0 0 4 0 91775 91779 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Spirosoma;s__Spirosoma radiotolerans;t__ 2 2 0 0 0 0 0 140583 140587 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium sp. JCM 19050;t__ 0 0 8 0 7 4 0 108630 108649 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Helicoverpa armigera granulovirus;t__ 0 0 0 0 0 293 0 3102 3395 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter canadensis;t__Helicobacter canadensis MIT 98-5491 0 0 0 8 2 138 0 32307 32455 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia;s__Roseburia faecis;t__ 0 0 0 46 74 0 0 71066 71186 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia miyamotoi;t__Borrelia miyamotoi LB-2001 0 0 0 0 8 15 0 18122 18145 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus humi;t__ 4 0 0 1 3 522 0 95666 96216 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus faecalis;t__Enterococcus faecalis 13-SD-W-01 0 0 0 0 0 21 0 58275 58296 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina lacustris;t__Methanosarcina lacustris Z-7289 0 2 0 0 0 79 0 82714 82796 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Odoribacteraceae;g__Odoribacter;s__Odoribacter laneus;t__Odoribacter laneus YIT 12061 2 29 0 41 0 4 0 74916 74992 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Kurthia;s__Kurthia huakuii;t__Kurthia huakuii LAM0618 3 10 48 112 125 257 0 70322 70877 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter;s__Polaribacter dokdonensis;t__Polaribacter dokdonensis DSW-5 0 0 0 0 20 64 0 61655 61739 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanotorris;s__Methanotorris formicicus;t__Methanotorris formicicus Mc-S-70 0 0 0 0 0 0 0 36150 36150 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalicoccus;s__Faecalicoccus pleomorphus;t__Faecalicoccus pleomorphus DSM 20574 53 80 0 0 82 0 0 39552 39767 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Salinimonas;s__Salinimonas chungwhensis;t__Salinimonas chungwhensis DSM 16280 0 0 3 9 5 0 0 79554 79571 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Gallibacterium;s__Gallibacterium anatis;t__Gallibacterium anatis UMN179 39 0 29 0 18 0 0 53660 53746 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Fibrisoma;s__Fibrisoma limi;t__Fibrisoma limi BUZ 3 0 1 0 1 22 0 0 149003 149027 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella tribocorum;t__Bartonella tribocorum CIP 105476 0 6 0 31 0 349 0 51995 52381 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella australis;t__Bartonella australis Aust/NH1 0 1 0 26 0 42 0 31860 31929 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella;s__Niabella soli;t__Niabella soli DSM 19437 0 1 0 0 17 55 0 93873 93946 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus aminophilus;t__Paracoccus aminophilus JCM 7686 1 0 2 0 41 44 0 72188 72276 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus equi;t__Lactobacillus equi DSM 15833 = JCM 10991 1 25 3 5 1 18 0 44505 44558 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus albus;t__Ruminococcus albus 7 = DSM 20455 0 0 0 0 0 0 0 14808 15928 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Alkaliphilus;s__Alkaliphilus metalliredigens;t__Alkaliphilus metalliredigens QYMF 0 11 0 14 23 0 0 98543 98591 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Coleofasciculaceae;g__Geitlerinema;s__Geitlerinema sp. PCC 7407;t__ 0 0 23 1 0 0 0 93598 93622 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella drancourtii;t__Legionella drancourtii LLAP12 0 0 1 0 0 60 0 80933 80994 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas polaris;t__Marinomonas polaris DSM 16579 0 7 13 0 0 30 0 100526 100576 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio proteoclasticus;t__ 0 5 0 0 49 362 0 82756 83172 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter bohemicus;t__Acinetobacter bohemicus ANC 3994 12 6 7 0 37 190 0 72657 72909 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas undina;t__Pseudoalteromonas undina DSM 6065 0 0 4 2 0 170 0 79695 79871 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfitibacter;s__Desulfitibacter alkalitolerans;t__Desulfitibacter alkalitolerans DSM 16504 45 6 119 301 42 0 0 86245 86759 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium vitis;t__Agrobacterium vitis S4 0 0 1 10 96 12 0 100070 100189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Proteus phage pPM_01;t__ 0 0 0 0 0 0 0 1170 1170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Clostera anachoreta granulovirus;t__ 0 0 0 0 0 0 0 2029 2029 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas communis;t__ 0 0 2 0 0 0 0 81354 81356 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Proteus;s__Proteus mirabilis;t__Proteus mirabilis HI4320 14 0 67 138 57 0 0 80996 81272 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema vincentii;t__Treponema vincentii F0403 0 0 0 0 0 7 0 53534 53541 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__;s__Alteromonadaceae bacterium Bs12;t__ 0 0 50 0 0 0 0 98371 98421 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira borgpetersenii;t__Leptospira borgpetersenii serovar Hardjo-bovis 0 0 0 0 0 304 0 78328 78632 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Desulfovirgula;s__Desulfovirgula thermocuniculi;t__Desulfovirgula thermocuniculi DSM 16036 0 0 1 0 0 0 0 60829 60830 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus xiangfangensis;t__ 0 0 3 3 19 561 0 58960 59556 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassospira;s__Thalassospira profundimaris;t__Thalassospira profundimaris WP0211 0 0 28 1 0 134 0 87391 87554 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Gorillibacterium;s__Gorillibacterium massiliense;t__ 0 0 0 2 11 11 0 110551 110575 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella frigidimarina;t__Shewanella frigidimarina NCIMB 400 0 0 56 19 0 163 0 96667 96905 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus poinarii;t__Xenorhabdus poinarii G6 3 2 17 148 18 420 0 72582 73190 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus mannitolivorans;t__Algoriphagus mannitolivorans DSM 15301 0 2 0 1 4 4 0 82995 83006 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Solibacillus;s__Solibacillus silvestris;t__ 4 3 22 115 23 0 0 79657 79824 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus phocae;t__Streptococcus phocae subsp. salmonis 0 1 1 5 1 89 0 32887 32984 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Oligella;s__Oligella urethralis;t__Oligella urethralis DSM 7531 15 0 2 1 2 28 0 46091 46139 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Dyadobacter;s__Dyadobacter fermentans;t__Dyadobacter fermentans DSM 18053 0 1 0 1 1 0 0 139352 139355 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio proteolyticus;t__Vibrio proteolyticus NBRC 13287 2 0 4 0 5 102 0 94706 94819 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella florencae;t__ 1 0 1 14 0 235 0 39300 39551 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomonas;s__Methylomonas denitrificans;t__ 0 4 16 0 13 31 0 103377 103441 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus fabifermentans;t__Lactobacillus fabifermentans DSM 21115 0 0 4 1 0 235 0 64937 65181 k__Bacteria;p__Acidobacteria;c__Blastocatellia;o__;f__;g__Chloracidobacterium;s__Chloracidobacterium thermophilum;t__Chloracidobacterium thermophilum B 3 0 0 0 0 0 0 73902 73905 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella birminghamensis;t__ 0 5 2 0 0 16 0 74573 74596 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Pelobacter;s__Pelobacter propionicus;t__Pelobacter propionicus DSM 2379 0 71 3 38 2 0 0 80045 80159 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Merismopediaceae;g__Synechocystis;s__Synechocystis sp. PCC 6803;t__ 0 0 0 0 0 0 0 7347 7465 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio hungatei;t__Butyrivibrio hungatei NK4A153 0 0 0 0 21 0 0 67231 67252 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Filifactor;s__Filifactor alocis;t__Filifactor alocis ATCC 35896 1 176 0 2 108 0 0 38333 38620 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes ihumii;t__Alistipes ihumii AP11 141 2 0 4 9 37 0 55154 55347 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum barnesii;t__Sulfurospirillum barnesii SES-3 0 0 2 0 5 0 0 50195 50202 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter jejuni;t__Campylobacter jejuni subsp. jejuni 0 0 0 0 10 117 0 32702 32829 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus amylotrophicus;t__Lactobacillus amylotrophicus DSM 20534 0 21 1 26 5 59 0 30779 30891 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus alcalophilus;t__Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 0 0 1 5 6 19 0 86246 87066 k__Bacteria;p__Verrucomicrobia;c__Opitutae;o__Opitutales;f__Opitutaceae;g__;s__Opitutaceae bacterium TAV5;t__ 0 7 0 0 0 0 0 146349 146356 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus sp. BF-4;t__ 0 1 1 11 10 6 0 52424 52461 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus odoratitofui;t__Lactobacillus odoratitofui DSM 19909 = JCM 15043 0 0 3 1 0 53 0 54889 54946 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio nigripulchritudo;t__ 0 0 35 0 39 323 0 126044 126441 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia suis;t__Chlamydia suis MD56 8 0 0 0 0 46 0 21313 21367 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Dehalobacter;s__Dehalobacter restrictus;t__Dehalobacter restrictus DSM 9455 0 5 0 1 27 549 0 58284 58866 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium limosum;t__Eubacterium limosum KIST612 1 2 0 71 30 0 0 86230 86334 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. URHD0069;t__ 0 0 0 1 17 43 0 135562 135623 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Acetonema;s__Acetonema longum;t__Acetonema longum DSM 6540 0 0 0 0 0 0 0 85888 85888 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Stenoxybacter;s__Stenoxybacter acetivorans;t__Stenoxybacter acetivorans DSM 19021 0 0 1 3 13 0 0 51687 51704 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola atlanticus;t__ 1 0 1 1 1189 1339 0 96150 98681 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Planktomarina;s__Planktomarina temperata;t__Planktomarina temperata RCA23 0 0 4 0 67 0 0 65691 65762 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gaetbulibacter;s__Gaetbulibacter saemankumensis;t__Gaetbulibacter saemankumensis DSM 17032 0 0 1 0 27 0 0 61722 61750 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Tetragenococcus;s__Tetragenococcus muriaticus;t__Tetragenococcus muriaticus DSM 15685 0 0 1 90 98 0 0 41235 41424 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Robinsoniella;s__Robinsoniella peoriensis;t__ 0 3 0 8 37 0 0 147720 147768 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Marinagarivorans;s__Marinagarivorans algicola;t__ 0 0 224 0 4 0 0 80722 80950 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga sp. oral taxon 338;t__Capnocytophaga sp. oral taxon 338 str. F0234 0 1 0 0 2 58 0 49373 49434 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfatibacillum;s__Desulfatibacillum aliphaticivorans;t__Desulfatibacillum aliphaticivorans DSM 15576 0 1 1 0 5 0 0 129194 129201 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroflexus;s__Psychroflexus tropicus;t__Psychroflexus tropicus DSM 15496 0 0 0 0 9 0 0 59856 59865 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Chikungunya virus;t__ 0 0 0 0 0 0 0 236 236 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella oris;t__Prevotella oris DSM 18711 = JCM 12252 0 1 0 0 34 663 0 60688 61386 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Coxiella;s__Coxiella burnetii;t__Coxiella burnetii RSA 493 0 0 1 0 0 0 14454 25454 39909 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella maculosa;t__Prevotella maculosa DSM 19339 = JCM 15638 0 0 0 0 26 205 0 65896 66127 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfitobacterium;s__Desulfitobacterium dichloroeliminans;t__Desulfitobacterium dichloroeliminans LMG P-21439 148 0 0 283 55 131 0 71851 72488 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter lanthieri;t__ 3 13 4 0 3 406 0 44726 45155 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Coxiella;s__Coxiella burnetii;t__Coxiella burnetii Dugway 5J108-111 0 0 0 0 0 0 0 1083 1083 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema caldarium;t__Treponema caldarium DSM 7334 0 0 0 0 0 0 0 64786 64786 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Chrysodeixis chalcites nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2992 2992 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus massiliensis;t__ 0 0 1 0 16 0 0 87034 87051 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Pelosinus;s__Pelosinus fermentans;t__Pelosinus fermentans JBW45 0 3 19 6 10 0 0 107578 107616 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio sp. NC2002;t__ 0 3 0 27 30 0 0 68044 68104 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia obeum;t__ 2 15 0 258 549 72 127 73377 74400 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus assamensis;t__Paenibacillus assamensis DSM 18201 0 0 0 2 0 10 0 100367 100379 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Sporolactobacillaceae;g__Tuberibacillus;s__Tuberibacillus calidus;t__Tuberibacillus calidus DSM 17572 0 0 0 47 0 0 0 64472 64519 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Yaniella;s__Yaniella halotolerans;t__Yaniella halotolerans DSM 15476 0 0 2 1 2 0 0 55494 55499 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bdellovibrionaceae;g__Bdellovibrio;s__Bdellovibrio exovorus;t__Bdellovibrio exovorus JSS 0 0 0 0 0 8 0 53139 53147 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__Kiloniellaceae;g__Kiloniella;s__Kiloniella laminariae;t__Kiloniella laminariae DSM 19542 0 0 0 0 0 0 0 88653 88653 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Coprococcus;s__Coprococcus sp. HPP0048;t__ 0 7 0 3 56 0 0 55566 55632 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium;s__Cardiobacterium hominis;t__Cardiobacterium hominis ATCC 15826 18 10 0 0 0 29 0 51240 51306 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus sp. JCM 16833;t__ 0 0 0 0 2 13 0 50237 50252 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Hippea;s__Hippea maritima;t__Hippea maritima DSM 10411 1 1 0 0 0 87 0 33799 33888 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia enterocolitica;t__Yersinia enterocolitica subsp. palearctica 0 0 0 0 0 16 28 1363 1449 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Candidatus Photodesmus;s__Candidatus Photodesmus blepharus;t__ 0 0 3 0 4 0 0 21562 21569 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Hydrogenivirga;s__Hydrogenivirga sp. 128-5-R1-1;t__ 0 0 0 4 4 0 0 59706 59714 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus nematophila;t__Xenorhabdus nematophila ATCC 19061 1 0 21 104 10 419 0 88091 88646 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Persephonella;s__Persephonella marina;t__Persephonella marina EX-H1 0 0 0 0 0 0 0 38605 38605 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp. AK22;t__ 9 1 3 3 1 0 0 46460 46477 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__;g__;s__Flavobacteriales bacterium ALC-1;t__ 0 0 1 48 0 0 0 76452 76501 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Alkanindiges;s__Alkanindiges illinoisensis;t__Alkanindiges illinoisensis DSM 15370 2 0 4 0 211 0 0 65729 65946 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus composti;t__Lactobacillus composti DSM 18527 = JCM 14202 0 0 2 2 16 296 0 68501 68817 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio anguillarum;t__Vibrio anguillarum serovar O1 2 0 30 0 28 625 0 80352 81037 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Salinicoccus;s__Salinicoccus albus;t__Salinicoccus albus DSM 19776 0 0 0 3 84 276 0 52360 52723 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Salinimicrobium;s__Salinimicrobium terrae;t__Salinimicrobium terrae DSM 17865 0 1 0 0 17 0 0 70794 70812 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__[Bacteroides] pectinophilus;t__[Bacteroides] pectinophilus ATCC 43243 0 10 0 276 15 0 0 60141 60442 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Regiella;s__Candidatus Regiella insecticola;t__Candidatus Regiella insecticola LSR1 0 0 7 27 1 0 0 40230 40265 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__gamma proteobacterium HdN1;t__ 0 8 17 0 1 1 0 91722 91749 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Moritellaceae;g__Moritella;s__Moritella dasanensis;t__Moritella dasanensis ArB 0140 0 0 8 4 0 109 0 97561 97682 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Kushneria;s__Kushneria aurantia;t__Kushneria aurantia DSM 21353 45 4 0 0 5 0 0 74680 74734 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium longum;t__Bifidobacterium longum NCC2705 0 0 1 0 10 45 0 45076 45132 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Candidatus Koribacter;s__Candidatus Koribacter versatilis;t__Candidatus Koribacter versatilis Ellin345 0 0 0 0 2 0 0 113005 113007 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Rubeoparvulum;s__Rubeoparvulum massiliense;t__ 0 0 0 0 4 0 0 56862 56866 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium;s__Sediminibacterium salmoneum;t__Sediminibacterium salmoneum NBRC 103935 0 137 0 0 8 0 0 63427 63572 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella stercorea;t__Prevotella stercorea DSM 18206 18 1 0 817 23 82 0 60415 61356 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus heilongjiangensis;t__ 0 1 6 1 1 376 0 55425 55810 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria wadsworthii;t__Neisseria wadsworthii 9715 0 2 0 1 4 174 0 47761 47942 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus criceti;t__Streptococcus criceti HS-6 3 0 0 15 0 132 0 48219 48369 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio mediterranei;t__Vibrio mediterranei NBRC 15635 0 0 2 0 3 72 0 112388 112465 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio sp. U5L;t__ 0 0 0 2 0 0 0 91679 91682 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium 3-1;t__ 0 2 0 74 2 3 0 100851 100932 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. APR13;t__ 0 0 0 0 13 134 0 97272 97419 k__Bacteria;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Acidithiobacillus;s__Acidithiobacillus ferrooxidans;t__Acidithiobacillus ferrooxidans ATCC 23270 0 4 0 0 0 106 0 59537 59647 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. D9;t__ 0 0 0 21 14 132 0 112528 112695 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__;s__Peptostreptococcaceae bacterium oral taxon 113;t__Peptostreptococcaceae bacterium oral taxon 113 str. W5053 6 67 0 4 8 0 0 41315 41400 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus macrosporangiidus;t__Alicyclobacillus macrosporangiidus CPP55 1 0 0 10 0 27 0 81793 81831 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas ruthenica;t__Pseudoalteromonas ruthenica CP76 0 0 6 1 0 26 0 79907 79940 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Eremococcus;s__Eremococcus coleocola;t__Eremococcus coleocola DSM 15696 1 0 2 2 0 0 0 37262 37267 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Sporolactobacillaceae;g__Sporolactobacillus;s__Sporolactobacillus vineae;t__Sporolactobacillus vineae DSM 21990 = SL153 0 0 0 1 0 1 0 57083 57085 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. B-jedd;t__ 0 0 5 14 30 115 0 93882 94046 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter schindleri;t__Acinetobacter schindleri CIP 107287 18 107 27 1 42 1241 0 65669 67105 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema maltophilum;t__Treponema maltophilum ATCC 51939 2 0 0 0 0 88 0 50442 50532 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Catenovulum;s__Catenovulum maritimum;t__ 0 0 6 8 6 11 0 90819 90850 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter trogontum;t__ 0 0 1 6 4 725 0 54112 54848 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter alimentarius;t__ 0 4 3 2 22 244 0 66375 66650 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas mediterranea;t__Marinomonas mediterranea MMB-1 0 1 59 9 5 206 0 93406 93686 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosospira;s__Nitrosospira briensis;t__Nitrosospira briensis C-128 0 0 10 0 6 0 0 64186 64202 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Candidatus Brocadiales;f__Candidatus Brocadiaceae;g__Candidatus Jettenia;s__Candidatus Jettenia caeni;t__ 0 0 0 0 6 0 0 81727 81733 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium polynesiense;t__ 0 0 0 0 3 20 0 70893 70916 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Pseudorhizobium;s__Pseudorhizobium pelagicum;t__ 0 0 0 0 46 0 0 102402 102448 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Fermentimonas;s__Fermentimonas caenicola;t__ 0 9 0 31 1 0 0 56137 56178 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium ventriculi;t__ 0 0 0 0 4 9 0 49522 49535 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Orbales;f__Orbaceae;g__Frischella;s__Frischella perrara;t__ 15 3 205 0 77 0 0 53547 53847 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus coryniformis;t__Lactobacillus coryniformis subsp. coryniformis 0 1 0 51 22 435 0 53172 53683 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Kroppenstedtia;s__Kroppenstedtia eburnea;t__ 0 3 0 33 2 0 0 70554 70592 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter swuensis;t__Hymenobacter swuensis DY53 0 0 0 0 0 0 0 6947 6952 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum arcachonense;t__Sulfurospirillum arcachonense DSM 9755 0 0 2 0 2 1 0 53042 53047 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__Sedimentibacter;s__Sedimentibacter sp. B4;t__ 0 0 0 0 0 0 0 79914 79914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Choristoneura rosaceana alphabaculovirus;t__ 0 0 0 0 0 0 0 2581 2581 k__Bacteria;p__Firmicutes;c__;o__;f__;g__;s__Firmicutes bacterium ASF500;t__ 0 678 0 0 0 0 0 72419 73097 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus machipongonensis;t__ 0 2 0 3 9 11 0 95708 95733 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Oenococcus;s__Oenococcus kitaharae;t__Oenococcus kitaharae DSM 17330 1 0 2 72 12 39 0 36547 36673 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophaceae;g__Syntrophus;s__Syntrophus aciditrophicus;t__Syntrophus aciditrophicus SB 23 1 1 0 0 0 0 63560 63585 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia mallotivora;t__ 0 0 0 18 31 39 0 92573 92661 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella pneumoniae;t__Klebsiella pneumoniae subsp. pneumoniae 90 7 28 204 1741 23 0 104536 106678 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geoalkalibacter;s__Geoalkalibacter subterraneus;t__ 71 46 465 22 5 22 0 68879 69510 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfobulbus;s__Desulfobulbus elongatus;t__Desulfobulbus elongatus DSM 2908 0 3 7 0 10 62 0 78964 79046 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter intestini;t__Commensalibacter intestini A911 0 0 1 0 5 0 0 49042 49048 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thuringiensis;t__ 1 15 5 24 76 3388 123 109465 113487 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Thermomonas;s__Thermomonas fusca;t__Thermomonas fusca DSM 15424 0 336 12 1 163 0 0 62362 62874 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella birtlesii;t__Bartonella birtlesii IBS 325 0 1 0 31 0 136 0 35827 35995 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halanaerobiaceae;g__Halothermothrix;s__Halothermothrix orenii;t__Halothermothrix orenii H 168 0 0 0 0 1 0 0 51561 51562 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium swingsii;t__ 0 0 11 0 19 35 0 110216 110281 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus xylosus;t__ 1 6 2 12 0 360 0 56357 56738 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas gingivalis;t__Porphyromonas gingivalis ATCC 33277 0 7 0 223 1 19 0 46847 47097 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Gracilibacillus;s__Gracilibacillus massiliensis;t__ 0 0 5 1 15 0 0 84101 84122 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia aldovae;t__ 0 0 3 24 35 513 0 83628 84203 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__;f__;g__Sulfurovum;s__Sulfurovum lithotrophicum;t__ 0 0 0 0 0 0 0 44357 44357 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Acyrthosiphon pisum) 0 0 0 0 0 0 0 299 299 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Thalassobacillus;s__Thalassobacillus sp. C254;t__ 0 2 1 0 20 0 0 80836 80859 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus capillatus;t__Lactobacillus capillatus DSM 19910 0 0 4 9 1 170 0 44332 44516 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus graminis;t__Lactobacillus graminis DSM 20719 0 1 4 2 0 74 0 36459 36540 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides neonati;t__ 0 2 0 523 0 1328 0 98573 100426 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__;g__Candidatus Walczuchella;s__Candidatus Walczuchella monophlebidarum;t__ 0 0 0 0 0 0 0 6185 6185 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus suebicus;t__Lactobacillus suebicus DSM 5007 = KCTC 3549 0 0 1 0 0 81 0 52794 52876 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Pontibacter;s__Pontibacter korlensis;t__ 0 1 0 0 4 0 0 109245 109250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage BCJA1c;t__ 0 0 0 0 0 0 0 821 821 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides sp. Ga6A1;t__ 0 0 0 47 0 0 0 76687 76734 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Brochothrix phage NF5;t__ 0 0 0 0 0 0 0 739 739 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira;s__Brachyspira pilosicoli;t__Brachyspira pilosicoli P43/6/78 1 0 1 0 0 83 0 51026 51111 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus aquaticus;t__Lactobacillus aquaticus DSM 21051 0 0 3 2 2 151 0 47887 48045 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella norrlandica;t__ 0 0 2 0 2 357 0 60756 61117 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Pyrobaculum;s__Pyrobaculum islandicum;t__Pyrobaculum islandicum DSM 4184 0 0 0 0 16 0 0 36512 36528 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium COE1;t__ 0 0 0 24 26 1314 0 95354 96718 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Mesoplasma;s__Mesoplasma photuris;t__Mesoplasma photuris ATCC 49581 2 0 9 2 2 18 0 15530 15563 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium pasteurianum;t__Clostridium pasteurianum DSM 525 = ATCC 6013 0 0 0 0 23 274 174 86571 87042 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanocellales;f__Methanocellaceae;g__Methanocella;s__Methanocella conradii;t__Methanocella conradii HZ254 0 0 0 0 0 0 0 47568 47568 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Cycloclasticus;s__Cycloclasticus pugetii;t__Cycloclasticus pugetii PS-1 0 0 4 0 0 0 0 47674 47678 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio fairfieldensis;t__ 0 0 0 0 1 53 0 73932 73986 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomicrobium;s__Methylomicrobium buryatense;t__Methylomicrobium buryatense 5G 0 1 19 0 21 9 0 101199 101249 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Anaplasma;s__Anaplasma centrale;t__Anaplasma centrale str. Israel 0 0 0 0 2 4 0 24130 24136 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Acidianus;s__Candidatus Acidianus copahuensis;t__ 0 0 0 0 0 0 0 48956 48956 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Shimazuella;s__Shimazuella kribbensis;t__Shimazuella kribbensis DSM 45090 0 1 0 13 0 0 0 83484 83498 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__;f__;g__Sulfurovum;s__Sulfurovum sp. AR;t__ 0 0 0 0 0 0 0 42497 42497 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium;s__Sphingobacterium sp. T2;t__ 0 4 0 0 5 8 0 60165 60182 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis;t__ 0 0 25 3 0 399 0 81053 81480 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium RS24;t__ 0 0 7 0 0 1 0 39139 39147 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus testis;t__ 0 3 27 7 69 346 0 78940 79392 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Histophilus;s__Histophilus somni;t__Haemophilus somnus 2336 3 0 70 0 48 0 0 45156 45277 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Parageobacillus;s__Parageobacillus thermoglucosidans;t__ 5 0 6 6 390 0 0 77054 77462 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma iners;t__Mycoplasma iners ATCC 19705 75 0 0 0 0 28 0 15167 15270 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia typhi;t__Rickettsia typhi str. Wilmington 0 1 0 0 0 209 0 22019 22229 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella paludivivens;t__Prevotella paludivivens DSM 17968 = JCM 13650 0 0 0 0 0 0 0 68938 68938 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__Thermosipho;s__Thermosipho melanesiensis;t__Thermosipho melanesiensis BI429 0 0 0 0 8 0 0 38296 38304 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter sp. MIT 05-5293;t__ 0 0 1 2 2 21 0 39643 39669 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum hiltneri;t__Herbaspirillum hiltneri N3 0 0 7 21 44 39 0 99198 99309 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas taeanensis;t__Pseudomonas taeanensis MS-3 0 0 3 0 0 50 0 109011 109064 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella koehlerae;t__Bartonella koehlerae subsp. koehlerae 0 0 0 14 0 723 0 34044 34781 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Hydrogenobaculum;s__Hydrogenobaculum sp. Y04AAS1;t__ 0 0 0 0 0 0 0 31190 31190 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Kinetoplastibacterium;s__Candidatus Kinetoplastibacterium oncopeltii;t__Candidatus Kinetoplastibacterium oncopeltii TCC290E 0 2 36 0 0 108 0 16057 16203 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Flavihumibacter;s__Flavihumibacter sp. ZG627;t__ 0 0 0 0 2 29 0 83542 83573 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus solani;t__ 4 0 10 26 68 456 0 105416 105980 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Dyadobacter;s__Dyadobacter tibetensis;t__Dyadobacter tibetensis Y620-1 0 1 0 0 1 17 0 106187 106206 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Asinibacterium;s__Asinibacterium sp. OR53;t__ 0 0 0 0 1 0 0 74306 74307 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus bovienii;t__Xenorhabdus bovienii SS-2004 6 0 21 140 28 0 0 84314 84509 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus terrigena;t__Algoriphagus terrigena DSM 22685 0 2 0 2 3 15 0 115490 115512 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Leadbetterella;s__Leadbetterella sp. JN14-9;t__ 8 0 0 2 0 1 0 89415 89426 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera intermedia;t__ 0 17 33 198 740 144 0 109418 110582 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma oculi;t__ 5 0 0 0 2 60 0 31675 31742 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kullabergensis;t__ 0 0 0 1 0 33 0 41482 41516 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Equid alphaherpesvirus 8;t__ 0 0 0 0 0 35 0 2948 2983 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. KNHs214;t__ 0 7 0 76 18 129 0 85069 85299 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__Ruminococcaceae bacterium D16;t__ 32 4 0 294 72 0 0 63527 63929 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoanaerobaculum;s__Lachnoanaerobaculum saburreum;t__Lachnoanaerobaculum saburreum DSM 3986 0 7 0 2 15 0 0 59111 59135 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Crocinitomicaceae;g__Fluviicola;s__Fluviicola taffensis;t__Fluviicola taffensis DSM 16823 0 1 0 6 0 0 0 92664 92671 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__[Eubacterium] hallii;t__[Eubacterium] hallii DSM 3353 1 58 0 778 0 30 0 64621 65488 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. FD3004;t__ 0 0 0 0 0 3 0 59067 59070 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus larvae;t__Paenibacillus larvae subsp. larvae 0 0 0 21 5 137 0 78072 80926 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium NC2004;t__ 0 0 0 0 15 44 0 67295 67354 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella buccae;t__Prevotella buccae ATCC 33574 8 1 0 0 40 1150 0 63133 64333 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium IMCC14465;t__ 0 0 2 0 0 0 0 38443 38445 k__Bacteria;p__Elusimicrobia;c__Elusimicrobia;o__Elusimicrobiales;f__Elusimicrobiaceae;g__Elusimicrobium;s__Elusimicrobium minutum;t__Elusimicrobium minutum Pei191 0 0 0 0 0 0 0 32871 32871 k__Bacteria;p__Thermodesulfobacteria;c__Thermodesulfobacteria;o__Thermodesulfobacteriales;f__Thermodesulfobacteriaceae;g__Thermodesulfobacterium;s__Thermodesulfobacterium hveragerdense;t__Thermodesulfobacterium hveragerdense DSM 12571 104 0 0 0 0 1650 0 32684 34438 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aequorivita;s__Aequorivita capsosiphonis;t__Aequorivita capsosiphonis DSM 23843 0 0 1 0 16 0 0 80709 80726 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Martelella;s__Martelella sp. AD-3;t__ 0 0 0 52 6 61 0 90975 91094 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Roseivirga;s__Roseivirga seohaensis;t__ 0 3 0 1 0 0 0 83111 83115 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides coprophilus;t__Bacteroides coprophilus DSM 18228 = JCM 13818 13 11 0 1837 0 1504 0 73203 76568 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Oribacterium;s__Oribacterium sinus;t__Oribacterium sinus F0268 0 22 0 37 1 0 0 52038 52098 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella denticola;t__Prevotella denticola F0289 0 4 0 5 13 551 0 58178 58751 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Rickettsiella;s__Rickettsiella grylli;t__ 0 0 3 0 0 0 0 31619 31622 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc gelidum;t__Leuconostoc gelidum subsp. gasicomitatum 0 0 8 4 45 87 0 38937 39081 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella tularensis;t__Francisella tularensis subsp. tularensis 8 4 3 0 0 114 0 37726 37855 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Bavariicoccus;s__Bavariicoccus seileri;t__Bavariicoccus seileri DSM 19936 0 12 5 111 272 0 0 44251 44651 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium tyrobutyricum;t__ 0 0 0 0 0 0 0 1254 1256 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus rennini;t__Lactobacillus rennini DSM 20253 0 1 0 2 6 49 0 45078 45136 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Megamonas;s__Megamonas funiformis;t__Megamonas funiformis YIT 11815 0 2 4 1 5 14 0 50418 50444 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caloramator;s__Caloramator proteoclasticus;t__Caloramator proteoclasticus DSM 10124 35 11 25 0 3 29 0 52671 52774 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage BP39;t__ 0 0 0 0 26 7 0 319 352 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Escherichia phage pro147;t__ 0 0 0 0 0 0 0 653 653 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geoalkalibacter;s__Geoalkalibacter ferrihydriticus;t__Geoalkalibacter ferrihydriticus DSM 17813 0 0 0 10 0 0 0 76742 76752 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus parabuchneri;t__ 0 1 8 3 5 315 0 51679 52011 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Anaerosalibacter;s__Anaerosalibacter massiliensis;t__ 110 2 0 53 21 0 0 63558 63775 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Prolixibacteraceae;g__Prolixibacter;s__Prolixibacter bellariivorans;t__Prolixibacter bellariivorans ATCC BAA-1284 0 0 3 1 0 0 0 102968 102972 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__;s__Yellowstone lake mimivirus;t__ 0 0 0 0 0 0 0 1473 1473 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Thermodesulfovibrio;s__Thermodesulfovibrio yellowstonii;t__Thermodesulfovibrio yellowstonii DSM 11347 0 0 0 0 0 11 0 40065 40076 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Clostridium phage phiCP7R;t__ 0 0 0 0 0 0 0 367 367 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Helicobacter phage phiHP33;t__ 0 0 0 0 0 0 0 492 492 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus alginolyticus;t__Paenibacillus alginolyticus DSM 5050 = NBRC 15375 0 0 1 20 0 487 0 165572 166080 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira kuenenii;t__Thiomicrospira kuenenii DSM 12350 0 1 13 0 58 61 0 48914 49047 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma arginini;t__ 0 0 0 0 0 86 0 13485 13571 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus pneumoniae;t__Streptococcus pneumoniae R6 0 0 0 11 0 144 0 40614 40772 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira licerasiae;t__Leptospira licerasiae serovar Varillal 0 0 0 0 0 54 0 84145 84199 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus shacheensis;t__ 0 3 1 2 1 22 0 79448 79477 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Mangrovibacter;s__Mangrovibacter sp. MFB070;t__ 5 0 10 63 111 0 0 106926 107117 k__Bacteria;p__Firmicutes;c__;o__;f__;g__;s__Firmicutes bacterium ZOR0006;t__ 0 163 0 0 0 0 0 38968 39131 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Cronobacter;s__Cronobacter sakazakii;t__ 0 22 30 371 1106 0 0 88227 90225 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__;g__Fangia;s__Fangia hongkongensis;t__Fangia hongkongensis FSC776 = DSM 21703 0 0 0 1 0 0 0 58858 58859 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia odorifera;t__Serratia odorifera DSM 4582 1 1 3 38 34 110 0 102155 102342 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira sp. Milos-T1;t__ 0 0 14 0 55 27 0 46792 46888 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Enterovibrio;s__Enterovibrio calviensis;t__Enterovibrio calviensis 1F-211 0 0 14 0 35 0 0 111464 111513 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus wakoensis;t__Bacillus wakoensis JCM 9140 0 0 2 54 6 934 0 89271 90268 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium kluyveri;t__Clostridium kluyveri DSM 555 3 160 0 186 247 23 0 78673 79292 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira weilii;t__Leptospira weilii serovar Topaz 0 0 0 0 0 11 0 86298 86309 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio parahaemolyticus;t__Vibrio parahaemolyticus RIMD 2210633 0 1 24 0 13 979 0 102127 103313 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium 2_1_46FAA;t__ 0 22 0 54 106 7 0 44162 44351 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thioploca;s__Thioploca ingrica;t__ 0 0 3 0 0 0 0 96197 96200 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella moravica;t__Legionella moravica DSM 19234 0 1 3 0 0 353 0 74728 75085 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter cibinongensis;t__Acetobacter cibinongensis 4H-1 0 1 1 0 90 62 0 61728 61883 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Simiduia;s__Simiduia agarivorans;t__Simiduia agarivorans SA1 = DSM 21679 0 0 21 7 1 0 0 85975 86004 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus pasadenensis;t__Paenibacillus pasadenensis DSM 19293 0 0 0 0 0 185 0 113589 113774 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Dickeya;s__Dickeya paradisiaca;t__Dickeya paradisiaca NCPPB 2511 0 1 0 24 15 7 0 92413 92460 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium elkanii;t__Bradyrhizobium elkanii USDA 76 0 0 0 2 0 101 0 189456 189559 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Hydrogenobacter;s__Hydrogenobacter thermophilus;t__Hydrogenobacter thermophilus TK-6 0 0 0 0 1 0 0 34861 34862 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Candidatus Stoquefichus;s__Candidatus Stoquefichus sp. SB1;t__ 2 49 0 0 129 0 0 71669 71849 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium Mf 1.05b.01;t__ 0 0 8 0 0 0 0 76474 76482 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Polaromonas;s__Polaromonas sp. EUR3 1.2.1;t__ 0 6 0 18 80 0 0 87942 88046 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Terasakiella;s__Terasakiella pusilla;t__Terasakiella pusilla DSM 6293 0 0 5 1 0 0 0 80910 80916 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas lutea;t__ 0 0 14 0 4 515 0 112409 112942 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halobacillus;s__Halobacillus sp. BBL2006;t__ 0 0 1 1 39 29 0 77776 77846 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Herpetosiphonales;f__Herpetosiphonaceae;g__Herpetosiphon;s__Herpetosiphon geysericola;t__ 0 0 0 0 0 0 0 122721 122721 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus saniviri;t__Lactobacillus saniviri JCM 17471 = DSM 24301 0 0 3 8 8 446 0 47822 48293 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Colwelliaceae;g__Colwellia;s__Colwellia sp. MT41;t__ 0 0 34 14 57 295 0 86358 86758 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Shigella;s__Shigella dysenteriae;t__Shigella dysenteriae Sd197 48 25 82 207 25611 0 0 60612 87384 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella massiliensis;t__ 5 1 6 0 4 477 0 87234 87727 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Endozoicomonas;s__Endozoicomonas numazuensis;t__ 0 2 23 6 0 54 0 120755 120840 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Murine mastadenovirus A;t__ 0 0 0 0 0 0 0 618 618 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Murine mastadenovirus A;t__ 0 0 0 0 0 0 0 618 618 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] aerotolerans;t__[Clostridium] aerotolerans DSM 5434 0 0 0 0 0 0 0 94556 94556 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Candidatus Symbiobacter;s__Candidatus Symbiobacter mobilis;t__Candidatus Symbiobacter mobilis CR 0 0 0 0 17 0 0 59819 59836 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus stilesii;t__ 0 0 2 2 11 57 0 36600 36672 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas sp. '520P1 No. 423';t__ 0 0 54 23 0 185 0 107488 107750 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. Ade.TY;t__ 0 0 0 0 1 26 0 62126 62154 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia sp. HF;t__ 0 0 0 0 0 0 0 22978 22978 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium ganghwense;t__ 0 0 4 0 6 0 0 110505 110516 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylotenera;s__Methylotenera sp. 1P/1;t__ 0 0 9 4 54 16 0 54867 54950 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas halocynthiae;t__Halomonas halocynthiae DSM 14573 0 0 4 0 0 6 0 57440 57450 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Xiburema virus;t__ 0 0 0 0 0 0 0 244 244 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Desulfuromonas;s__Desulfuromonas soudanensis;t__ 0 0 0 0 0 0 0 79172 79172 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. KIOST-1;t__ 0 0 1 3 38 0 0 126338 126380 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter terrenus;t__ 28 0 0 0 0 0 0 126778 126806 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium freiburgense;t__Corynebacterium freiburgense DSM 45254 66 0 0 2 0 2 0 58065 58135 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. FJAT-27916;t__ 5 0 5 28 50 93 0 82104 82285 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina mazei;t__Methanosarcina mazei S-6 0 0 0 0 0 178 0 82677 82856 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus campisalis;t__ 0 0 4 4 34 23 0 103386 103451 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus saprophyticus;t__ 5 5 0 2 0 162 26 48043 48249 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Salimicrobium;s__Salimicrobium jeotgali;t__ 0 3 1 4 25 0 0 53941 53974 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus bataviensis;t__Bacillus bataviensis LMG 21833 1 0 15 3 6 29 0 106989 107043 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Andreprevotia;s__Andreprevotia chitinilytica;t__Andreprevotia chitinilytica DSM 18519 0 0 8 1 2 0 0 102823 102834 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Avipoxvirus;s__Fowlpox virus;t__ 0 0 0 0 0 0 0 5770 5770 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium A4;t__ 0 0 0 137 95 718 0 134442 135392 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter mustelae;t__Helicobacter mustelae 12198 0 19 0 10 0 0 0 31532 31561 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Scardovia;s__Scardovia inopinata;t__Scardovia inopinata JCM 12537 0 0 0 0 6 0 0 35951 35957 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium saccharobutylicum;t__Clostridium saccharobutylicum DSM 13864 0 0 0 0 27 699 0 101430 102156 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Rheinheimera;s__Rheinheimera texasensis;t__Rheinheimera texasensis DSM 17496 0 0 8 0 0 16 0 91647 91671 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium intestinale;t__Clostridium intestinale URNW 0 0 0 0 11 49 0 93188 93248 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea dispersa;t__Pantoea dispersa EGD-AAK13 0 0 5 55 20 23 0 95117 95220 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alloiococcus;s__Alloiococcus otitis;t__Alloiococcus otitis ATCC 51267 5 12 2 6 2 0 0 35591 35618 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chitinilyticum;s__Chitinilyticum aquatile;t__Chitinilyticum aquatile DSM 21506 79 115 3 1 64 0 0 73373 73635 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mindensis;t__Lactobacillus mindensis DSM 14500 0 0 2 0 0 148 0 46310 46460 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus brevis;t__Brevibacillus brevis NBRC 100599 0 1 25 47 66 0 0 125789 125928 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Gulbenkiania;s__Gulbenkiania indica;t__ 0 3 9 1 6 0 0 56894 56913 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium homopropionicum;t__Clostridium homopropionicum DSM 5847 0 4 4 8 1 14 0 72894 72925 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Microbulbiferaceae;g__Microbulbifer;s__Microbulbifer agarilyticus;t__Microbulbifer agarilyticus S89 0 2 5 5 0 8 0 77130 77150 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus massiliensis;t__Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 2 102 0 9 379 12 0 79197 79701 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Bermanella;s__Bermanella marisrubri;t__ 0 0 21 5 2 0 0 70424 70452 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylophilus;s__Methylophilus sp. Leaf416;t__ 14 12 7 0 11 51 0 58693 58788 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Rheinheimera;s__Rheinheimera perlucida;t__Rheinheimera perlucida DSM 18276 0 37 270 0 0 300 0 79194 79801 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Thermobacillus;s__Thermobacillus composti;t__Thermobacillus composti KWC4 0 0 0 88 74 0 0 83964 84126 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Laribacter;s__Laribacter hongkongensis;t__Laribacter hongkongensis HLHK9 7 0 27 8 3 0 0 63341 63386 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas pelagia;t__Pseudomonas pelagia CL-AP6 105 1 11 0 0 296 0 92281 92694 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__;s__gamma proteobacterium IMCC3088;t__ 0 2 57 2 53 7 0 60318 60439 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Chrysodeixis includens nucleopolyhedrovirus;t__Pseudoplusia includens SNPV IE 0 0 0 0 0 1 0 2781 2782 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema primitia;t__Treponema primitia ZAS-2 0 0 0 0 0 8 0 81189 81197 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Orbales;f__Orbaceae;g__Candidatus Schmidhempelia;s__Candidatus Schmidhempelia bombi;t__Candidatus Schmidhempelia bombi str. Bimp 0 1 47 0 0 0 0 39779 39827 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas badia;t__Comamonas badia DSM 17552 0 344 112 157 97 6 0 72861 73577 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Spiribacter;s__Spiribacter curvatus;t__ 0 0 0 1 0 0 0 38531 38532 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Leptothrix;s__Leptothrix cholodnii;t__Leptothrix cholodnii SP-6 0 2 3 44 43 0 0 98096 98188 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Syntrophomonadaceae;g__Syntrophomonas;s__Syntrophomonas zehnderi;t__Syntrophomonas zehnderi OL-4 0 0 162 227 0 15 0 58275 58697 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] stercorarium;t__[Clostridium] stercorarium subsp. stercorarium 0 3 0 1 0 307 0 59172 59483 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia ruckeri;t__ 0 1 27 135 210 152 0 73469 73994 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio breoganii;t__ 0 0 3 0 0 0 0 83019 83022 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Vogesella;s__Vogesella sp. EB;t__ 0 1 18 5 22 0 0 70616 70662 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Yokenella;s__Yokenella regensburgei;t__Yokenella regensburgei ATCC 49455 0 3 5 48 229 0 0 96588 96873 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum sp. TSA66;t__ 0 0 28 55 43 47 0 107366 107539 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fuscovaginae;t__Pseudomonas fuscovaginae ICMP 5940 1 0 45 0 0 222 0 126441 126709 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Caldalkalibacillus;s__Caldalkalibacillus thermarum;t__Caldalkalibacillus thermarum TA2.A1 0 0 0 2 18 0 0 57406 57426 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylocystis;s__Methylocystis parvus;t__Methylocystis parvus OBBP 5 1 0 4 0 0 0 89301 89311 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Shigella virus PSf2;t__Shigella phage pSf-2 0 0 0 0 0 0 0 1002 1002 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Siccibacter;s__Siccibacter turicensis;t__Siccibacter turicensis LMG 23730 0 0 4 43 480 0 0 84016 84543 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus pini;t__Paenibacillus pini JCM 16418 0 0 1 2 0 35 0 99070 99108 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas translucens;t__Xanthomonas translucens pv. undulosa 0 0 1 0 3 0 0 91218 91222 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Pectobacterium;s__Pectobacterium carotovorum;t__Pectobacterium carotovorum subsp. carotovorum 9 2 22 220 169 0 0 96836 97258 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina zobellii;t__ 0 34 8 9 0 412 0 51758 52221 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia acidipaludis;t__Paraburkholderia acidipaludis NBRC 101816 0 0 0 6 28 54 0 129299 129387 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio paradoxus;t__Thioalkalivibrio paradoxus ARh 1 0 0 4 2 8 605 0 74515 75134 k__Bacteria;p__Chloroflexi;c__Caldilineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea;s__Caldilinea aerophila;t__Caldilinea aerophila DSM 14535 = NBRC 104270 0 7 0 0 0 0 0 102890 102897 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Sedimenticola;s__Sedimenticola selenatireducens;t__Sedimenticola selenatireducens DSM 17993 0 434 10 0 0 6 0 91177 91627 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fragi;t__ 0 0 16 0 0 10 0 102010 102036 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella boevrei;t__Moraxella boevrei DSM 14165 2 1 2 0 6 43 0 48404 48458 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Thermoactinomyces;s__Thermoactinomyces daqus;t__ 0 0 0 5 0 13 0 68653 68671 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Aquifex;s__Aquifex aeolicus;t__Aquifex aeolicus VF5 0 0 0 0 0 0 0 31026 31026 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia ibidis;t__Chlamydia ibidis 10-1398/6 0 0 0 0 0 28 0 22887 22915 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus clausii;t__Bacillus clausii KSM-K16 0 14 7 14 20 64 0 85958 86077 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia tracheiphila;t__Erwinia tracheiphila PSU-1 0 0 3 79 4 27 0 83940 84053 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus megaterium;t__Bacillus megaterium MSP20.1 0 0 0 0 16 2 0 86465 86483 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium antarcticum;t__ 0 0 0 0 21 9 0 62437 62467 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylobacter;s__Methylobacter luteus;t__Methylobacter luteus IMV-B-3098 0 0 21 0 30 102 0 100361 100514 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium halotolerans;t__Photobacterium halotolerans DSM 18316 0 0 0 0 0 3 0 93482 93485 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter atlanticus;t__ 0 0 1 51 143 29 0 60023 60247 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Riesia;s__Candidatus Riesia pediculicola;t__Candidatus Riesia pediculicola USDA 0 0 0 0 0 0 0 154 154 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus durus;t__ 0 0 0 20 24 207 0 120515 120766 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Jeotgalibacillus;s__Jeotgalibacillus campisalis;t__ 0 0 2 21 5 12 0 72925 72965 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella buccalis;t__Prevotella buccalis ATCC 35310 14 0 0 153 0 216 0 60081 60464 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Effusibacillus;s__Effusibacillus pohliae;t__Effusibacillus pohliae DSM 22757 0 0 0 4 1 0 0 67010 67015 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus sanguinis;t__Streptococcus sanguinis SK36 2 1 1 12 0 263 0 47489 47768 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinobacterium;s__Marinobacterium litorale;t__Marinobacterium litorale DSM 23545 0 5 40 1 0 0 0 87388 87434 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus watsonii;t__Nitrosococcus watsonii C-113 0 2 6 0 0 408 0 66155 66571 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter nectaris;t__Acinetobacter nectaris CIP 110549 5 1 8 0 9 127 0 53150 53300 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Zhongshania;s__Zhongshania aliphaticivorans;t__ 0 0 7 0 230 0 0 83850 84087 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus ferrooxydans;t__ 0 0 0 1 0 4 0 100675 100680 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas granuli;t__Comamonas granuli NBRC 101663 0 62 1 13 25 5 0 69951 70057 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Gilvimarinus;s__Gilvimarinus agarilyticus;t__ 0 0 12 16 5 82 0 83385 83500 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas rhizophila;t__ 0 0 3 0 70 142 0 92701 92916 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Brackiella;s__Brackiella oedipodis;t__Brackiella oedipodis DSM 13743 0 1 0 6 8 0 0 38275 38290 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio vulnificus;t__Vibrio vulnificus YJ016 0 0 0 0 0 0 0 970 970 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus camelliae;t__Lactobacillus camelliae DSM 22697 = JCM 13995 0 0 1 0 0 4 0 50534 50539 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ethanoligenens;s__Ethanoligenens harbinense;t__Ethanoligenens harbinense YUAN-3 0 0 0 0 13 0 0 60158 60171 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Ferrimonadaceae;g__Ferrimonas;s__Ferrimonas senticii;t__Ferrimonas senticii DSM 18821 0 1 8 6 0 2 0 77558 77575 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea sp. PSNIH2;t__ 1 68 30 474 31 28 0 84687 85421 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia sp. CCS1;t__ 0 0 0 0 22 3 0 86334 86359 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus radiodurans;t__Deinococcus radiodurans R1 0 0 0 0 0 27 0 61190 61217 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeobacter;s__Phaeobacter sp. CECT 7735;t__ 0 0 1 0 132 0 0 87013 87146 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fluorescens;t__Pseudomonas fluorescens F113 5 4 16 0 0 592 83 136216 136916 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelatoclostridium;s__[Clostridium] spiroforme;t__[Clostridium] spiroforme DSM 1552 2 3 0 0 0 0 0 50115 50120 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Dasania;s__Dasania marina;t__Dasania marina DSM 21967 0 0 14 7 7 0 0 82022 82050 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella ovis;t__ 1 6 4 0 27 2 0 45270 45310 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio desulfuricans;t__Desulfovibrio desulfuricans subsp. desulfuricans 0 0 0 0 0 0 0 57468 57468 k__Bacteria;p__Verrucomicrobia;c__;o__;f__;g__;s__Verrucomicrobia bacterium LP2A;t__ 0 23 0 0 0 0 0 49283 49306 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera micronuciformis;t__Megasphaera micronuciformis F0359 0 2 1 0 4 8 0 35201 35216 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Trabulsiella;s__Trabulsiella odontotermitis;t__ 0 3 13 57 449 0 0 91433 91955 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas translucida;t__Pseudoalteromonas translucida KMM 520 0 0 38 0 0 263 0 82649 82950 k__Bacteria;p__Acidobacteria;c__;o__;f__;g__Thermoanaerobaculum;s__Thermoanaerobaculum aquaticum;t__ 0 0 0 0 0 0 0 52972 52972 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Ideonella;s__Ideonella sakaiensis;t__ 0 44 3 76 111 0 0 122184 122418 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfococcus;s__Desulfococcus oleovorans;t__Desulfococcus oleovorans Hxd3 0 0 0 0 0 0 0 78883 78883 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Cellvibrio;s__Cellvibrio mixtus;t__Cellvibrio mixtus subsp. mixtus 0 0 4 2 1 29 0 103116 103152 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia birgiae;t__Afipia birgiae 34632 0 0 60 1 60 0 0 105802 105923 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas aeruginosa;t__Pseudomonas aeruginosa PAO1 71 3 49 0 3 235 0 124909 125288 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfatiglans;s__Desulfatiglans anilini;t__Desulfatiglans anilini DSM 4660 0 33 296 0 3 0 0 92760 93092 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Aquitalea;s__Aquitalea pelogenes;t__ 0 1 1 4 0 0 0 87471 87477 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Roseomonas;s__Roseomonas cervicalis;t__Roseomonas cervicalis ATCC 49957 0 0 1 0 9 228 0 86623 86861 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria weaveri;t__ 0 0 0 0 0 0 0 43769 43769 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter sp. OR-1;t__ 0 1 0 3 0 18 0 90945 90967 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gramella;s__Gramella portivictoriae;t__Gramella portivictoriae DSM 23547 0 0 1 0 11 33 0 65224 65269 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma sabaudiense;t__Spiroplasma sabaudiense Ar-1343 0 0 2 2 0 14 0 21501 21519 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Dehalobacter;s__Dehalobacter sp. FTH1;t__ 10 2 0 0 3 3 0 126511 126529 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum ruminis;t__Desulfotomaculum ruminis DSM 2154 0 9 5 0 0 56 0 79310 79380 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Moranella;s__Candidatus Moranella endobia;t__Candidatus Moranella endobia PCIT 0 0 2 2 2 0 0 10759 10765 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XVII. Incertae Sedis;g__Sulfobacillus;s__Sulfobacillus thermosulfidooxidans;t__ 0 1 0 0 0 0 0 76056 76057 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium argentinense;t__Clostridium argentinense CDC 2741 0 1 0 1 5 25 0 94785 94817 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes sp. ZOR0009;t__ 0 0 0 0 0 0 0 88637 88637 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter sp. IMCC21906;t__ 0 0 0 0 0 0 0 69379 69379 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Phascolarctobacterium;s__Phascolarctobacterium succinatutens;t__Phascolarctobacterium succinatutens YIT 12067 83 838 19 0 3 0 0 41264 42207 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__;s__marine gamma proteobacterium HTCC2143;t__ 9 6 12 1 7 0 0 78421 78456 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter papayae;t__Acetobacter papayae JCM 25143 0 0 0 0 38 5 0 60445 60488 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Moritellaceae;g__Moritella;s__Moritella viscosa;t__ 0 0 69 41 0 0 0 101611 101721 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cellulophaga phage phi39:1;t__ 0 0 0 0 0 0 0 575 575 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus taiwanensis;t__Paenibacillus taiwanensis DSM 18679 0 0 0 0 0 6 0 104787 104793 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Catabacteriaceae;g__Catabacter;s__Catabacter hongkongensis;t__ 0 0 0 16 0 0 0 63812 63828 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tateyamaria;s__Tateyamaria sp. ANG-S1;t__ 0 0 0 0 38 0 0 88412 88450 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__;s__Rhodobacteraceae bacterium HTCC2150;t__ 0 2 0 0 61 0 0 71550 71613 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira kmetyi;t__Leptospira kmetyi serovar Malaysia 0 0 0 0 0 93 0 88270 88363 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Cryomorphaceae;g__Owenweeksia;s__Owenweeksia hongkongensis;t__Owenweeksia hongkongensis DSM 17368 0 1 0 7 0 0 0 79993 80001 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter vibrioides;t__Caulobacter crescentus CB15 0 0 7 0 0 0 104 80227 80338 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia symbiotica;t__Serratia symbiotica SCt-VLC 0 0 6 36 0 20 0 49717 49779 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter nitrogenifigens;t__Acetobacter nitrogenifigens DSM 23921 = LMG 23498 0 1 2 0 47 10 0 85249 85309 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix parietina;t__Calothrix sp. PCC 6303 0 0 3 24 0 0 0 135329 135356 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio rhizosphaerae;t__Vibrio rhizosphaerae DSM 18581 0 0 1 0 2 8 0 88934 88945 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Tetragenococcus;s__Tetragenococcus halophilus;t__Tetragenococcus halophilus NBRC 12172 0 1 16 93 151 127 0 50866 51254 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia akari;t__Rickettsia akari str. Hartford 0 1 0 0 0 296 0 24324 24621 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halobacteroidaceae;g__Acetohalobium;s__Acetohalobium arabaticum;t__Acetohalobium arabaticum DSM 5501 0 0 0 0 0 0 0 49391 49391 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta lutea;t__ 0 0 0 0 0 0 0 70451 70451 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Candidatus Midichloriaceae;g__Candidatus Midichloria;s__Candidatus Midichloria mitochondrii;t__Candidatus Midichloria mitochondrii IricVA 0 1 1 0 0 0 0 23672 23674 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas kerstersii;t__ 14 162 2 5 68 245 0 73895 74391 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis benevestitus;t__Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 0 0 0 0 10 25 0 99497 99532 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter sp. 638;t__ 0 7 35 187 215 0 0 89930 90374 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Labrenzia;s__Labrenzia aggregata;t__Labrenzia aggregata IAM 12614 0 0 27 0 0 0 0 131111 131138 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Leclercia;s__Leclercia adecarboxylata;t__Leclercia adecarboxylata ATCC 23216 = NBRC 102595 1 3 7 94 989 0 0 98409 99508 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus rhinitidis;t__Peptoniphilus rhinitidis 1-13 1 420 0 0 77 181 0 36924 37603 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema azotonutricium;t__Treponema azotonutricium ZAS-9 39 0 0 0 0 17 0 77057 77113 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria bacilliformis;t__Neisseria bacilliformis ATCC BAA-1200 0 1 0 0 118 24 0 48420 48565 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Polaromonas;s__Polaromonas naphthalenivorans;t__Polaromonas naphthalenivorans CJ2 0 0 0 0 0 20 0 18615 19103 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium marinum;t__ 0 0 6 0 9 34 0 110530 110579 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella aerogenes;t__Klebsiella aerogenes KCTC 2190 1 2 42 173 510 608 0 104270 105606 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Risungbinella;s__Risungbinella massiliensis;t__ 0 0 0 5 0 0 0 68397 68402 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Moorella;s__Moorella mulderi;t__Moorella mulderi DSM 14980 0 0 0 1 0 0 0 59864 59865 k__Bacteria;p__Chloroflexi;c__Ktedonobacteria;o__Thermogemmatisporales;f__Thermogemmatisporaceae;g__Thermogemmatispora;s__Thermogemmatispora carboxidivorans;t__ 0 0 0 0 0 0 0 112159 112159 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Neptunomonas;s__Neptunomonas antarctica;t__ 0 0 29 0 3 15 0 91224 91271 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Thermoanaerobacter cellulolyticus;t__Thermoanaerobacter cellulolyticus NA10 0 2 65 0 0 0 0 50212 50279 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium mt11;t__ 1 5 0 0 1 0 0 71265 71272 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__;s__[Eubacterium] dolichum;t__[Eubacterium] dolichum DSM 3991 16 736 0 0 74 0 0 42936 43764 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus parauberis;t__Streptococcus parauberis KCTC 11537 0 2 0 17 0 197 0 42659 42877 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Hahella;s__Hahella chejuensis;t__Hahella chejuensis KCTC 2396 0 0 52 0 0 0 0 144253 144305 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Beduini;s__Beduini massiliensis;t__ 7 122 0 29 20 0 0 56824 57002 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Polaromonas;s__Polaromonas sp. JS666;t__ 0 0 0 8 28 22 0 103947 104005 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter ghanensis;t__ 0 3 3 0 319 119 0 52838 53282 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Leptospirillum;s__Leptospirillum ferriphilum;t__Leptospirillum ferriphilum ML-04 0 0 0 0 0 16 0 48107 48123 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] bolteae;t__[Clostridium] bolteae 90A9 5 153 0 459 444 0 0 126255 127316 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli K-12 130 41 169 216 8836 0 42392 40761 92833 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium algidicarnis;t__ 0 0 0 0 18 61 0 61126 61205 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halobacteroidaceae;g__Halonatronum;s__Halonatronum saccharophilum;t__Halonatronum saccharophilum DSM 13868 0 0 0 0 0 0 0 57324 57324 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Desulfurella;s__Desulfurella acetivorans;t__Desulfurella acetivorans A63 2 1 0 0 0 0 0 36322 36325 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria mucosa;t__Neisseria mucosa C102 0 0 0 0 16 119 0 43038 43173 k__Bacteria;p__Lentisphaerae;c__Lentisphaeria;o__Lentisphaerales;f__Lentisphaeraceae;g__Lentisphaera;s__Lentisphaera araneosa;t__Lentisphaera araneosa HTCC2155 12 0 0 0 0 0 0 120304 120316 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus virus G;t__ 0 0 0 0 0 0 0 9950 9950 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Alysiella;s__Alysiella crassa;t__Alysiella crassa DSM 2578 0 12 0 2 33 0 0 54895 54942 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Oxalobacter;s__Oxalobacter formigenes;t__Oxalobacter formigenes HOxBLS 179 1 6 38 12 0 0 49424 49660 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. VKM B-2647;t__ 0 0 0 1 44 115 0 138689 138849 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina xiamenensis;t__Idiomarina xiamenensis 10-D-4 0 33 14 6 0 33 0 57758 57844 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Mannheimia phage vB_MhS_587AP2;t__ 0 0 0 0 0 372 0 599 971 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thuringiensis;t__[Bacillus thuringiensis] serovar konkukian 0 7 15 49 54 45569 0 59059 104753 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus daejeonensis;t__Paenibacillus daejeonensis DSM 15491 0 0 0 1 0 8 0 149028 149037 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio bastinii;t__Desulfovibrio bastinii DSM 16055 0 0 0 1 0 6 0 78091 78098 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptonema;s__Leptonema illini;t__Leptonema illini DSM 21528 0 0 0 0 0 0 0 90384 90384 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus pseudoporcinus;t__Streptococcus pseudoporcinus LQ 940-04 3 1 0 49 0 65 0 42412 42530 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium sp. ZWU0011;t__ 0 0 0 0 6 0 0 44410 44416 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas bennonis;t__Porphyromonas bennonis DSM 23058 = JCM 16335 8 1 0 3 0 0 0 40290 40302 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Sporolactobacillaceae;g__;s__[Bacillus] selenitireducens;t__[Bacillus] selenitireducens MLS10 0 17 2 72 0 0 0 71758 71849 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosospira;s__Nitrosospira lacus;t__ 0 0 7 0 16 12 0 65161 65196 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Microcystaceae;g__Microcystis;s__Microcystis aeruginosa;t__Microcystis aeruginosa NIES-843 1 0 20 0 0 0 0 116833 116855 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Nitratireductor;s__Nitratireductor indicus;t__Nitratireductor indicus C115 10 14 944 346 6 68 0 98321 99709 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lysinibacillus;s__Lysinibacillus fusiformis;t__ 17 8 31 265 204 1382 0 94968 96875 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus ovis;t__Streptococcus ovis DSM 16829 0 0 1 2 0 47 0 47062 47112 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium giardinii;t__Rhizobium giardinii bv. giardinii H152 0 0 0 8 43 20 0 135728 135799 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella ancashensis;t__ 0 1 0 26 0 22 0 29304 29353 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ruminis;t__Lactobacillus ruminis ATCC 27782 1 0 20 8 6 30 0 41268 41333 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter towneri;t__ 0 16 0 0 0 2 0 58876 58894 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella sp. RIT-PI-d;t__ 0 2 3 21 44 0 0 85021 85091 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. UNC451MF;t__ 0 0 0 6 0 10 0 149527 149543 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__;g__;s__Verrucomicrobiae bacterium DG1235;t__ 0 1 0 0 0 0 0 115335 115336 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella pallens;t__Prevotella pallens ATCC 700821 30 0 0 64 19 550 0 59929 60627 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Omegavirus;s__Mycobacterium phage Courthouse;t__ 0 0 0 0 10 243 0 1958 2211 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__SAR116 cluster alpha proteobacterium HIMB100;t__ 0 2 2 0 0 2 0 49155 49161 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter lwoffii;t__Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512 6 5 4 1 72 1472 0 62507 64067 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Hydrogenophilales;f__Hydrogenophilaceae;g__Tepidiphilus;s__Tepidiphilus margaritifer;t__Tepidiphilus margaritifer DSM 15129 0 43 2 0 1 1028 0 43253 44327 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Helcococcus;s__Helcococcus kunzii;t__Helcococcus kunzii ATCC 51366 4 52 0 0 114 40 0 41379 41589 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella melaninogenica;t__Prevotella melaninogenica ATCC 25845 0 3 0 9 6 798 0 62547 63363 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus panacihumi;t__Brevibacillus panacihumi W25 0 6 13 56 397 448 0 109969 110889 k__Bacteria;p__Aquificae;c__Aquificae;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Desulfurobacterium;s__Desulfurobacterium thermolithotrophum;t__Desulfurobacterium thermolithotrophum DSM 11699 0 0 0 0 0 0 0 30839 30839 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. LF2;t__ 4 0 0 2 27 172 0 74773 74978 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanomethylovorans;s__Methanomethylovorans hollandica;t__Methanomethylovorans hollandica DSM 15978 0 0 0 0 13 0 0 48554 48578 k__Bacteria;p__Ignavibacteriae;c__Ignavibacteria;o__Ignavibacteriales;f__Melioribacteraceae;g__Melioribacter;s__Melioribacter roseus;t__Melioribacter roseus P3M-2 0 0 0 5 0 0 0 66003 66008 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. AT01-02;t__ 0 0 0 1 2 21 0 100347 100371 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter sp. GAI101;t__ 0 0 2 0 96 0 0 90062 90160 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter acinonychis;t__Helicobacter acinonychis str. Sheeba 0 0 0 8 0 7 0 31063 31078 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Sutterellaceae;g__Parasutterella;s__Parasutterella excrementihominis;t__Parasutterella excrementihominis YIT 11859 9 0 3 3 49 0 0 56368 56432 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta africana;t__Spirochaeta africana DSM 8902 0 0 0 0 0 4 0 65713 65717 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Conchiformibius;s__Conchiformibius kuhniae;t__Conchiformibius kuhniae DSM 17694 0 0 0 0 14 9 0 42135 42158 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella caprae;t__Moraxella caprae DSM 19149 3 0 1 0 6 463 0 51331 51804 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Caldibacillus;s__Caldibacillus debilis;t__Caldibacillus debilis DSM 16016 0 0 0 12 14 0 0 61038 61064 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paucivorans;t__ 0 0 1 8 19 404 0 46478 46914 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__Enterobacteriaceae bacterium LSJC7;t__ 0 0 20 34 69 0 0 92152 92275 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Anaeromassilibacillus;s__Anaeromassilibacillus senegalensis;t__ 0 0 0 1 1 0 0 70176 70178 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus gauvreauii;t__Ruminococcus gauvreauii DSM 19829 23 12 0 577 12 0 0 81127 81751 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia ubonensis;t__Burkholderia ubonensis MSMB22 0 2 3 22 0 0 0 143750 143777 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Pontibacillus;s__Pontibacillus litoralis;t__Pontibacillus litoralis JSM 072002 2 0 1 0 9 0 0 63892 63904 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Sodalis;s__Sodalis glossinidius;t__Sodalis glossinidius str. 'morsitans' 1 0 13 77 80 0 0 83251 83422 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus glycinifermentans;t__ 23 0 16 13 53 260 0 91783 92148 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylobacillus;s__Methylobacillus flagellatus;t__Methylobacillus flagellatus KT 1 6 95 0 24 0 0 59304 59430 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. OxB-1;t__ 4 0 16 52 41 71 0 71708 71892 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter cetorum;t__Helicobacter cetorum MIT 99-5656 0 0 1 7 0 46 195 36424 36673 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga frappieri;t__ 1 22 197 0 0 46 0 53683 53949 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus rhamnosus;t__Lactobacillus rhamnosus GG 0 1 14 24 0 125 0 59925 60202 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus darwinianus;t__ 0 1 0 7 5 45 0 59144 59202 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter fetus;t__Campylobacter fetus subsp. testudinum 0 0 0 0 10 260 0 35239 35509 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Dyadobacter;s__Dyadobacter alkalitolerans;t__Dyadobacter alkalitolerans DSM 23607 0 1 0 0 0 25 0 125583 125609 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus sp. SB49;t__ 0 0 1 0 36 4 0 74069 74110 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__Kiloniellaceae;g__Kiloniella;s__Kiloniella spongiae;t__ 0 0 2 0 0 0 0 89358 89360 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. M62/1;t__ 18 196 0 285 0 0 0 76074 76573 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella rochalimae;t__Bartonella rochalimae ATCC BAA-1498 0 0 5 30 0 12 0 30054 30101 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus fuchuensis;t__Lactobacillus fuchuensis DSM 14340 = JCM 11249 0 1 2 3 1 206 0 41797 42010 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia sp. Leaf53;t__ 0 0 3 46 10 117 0 102080 102256 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Sporosarcina;s__Sporosarcina newyorkensis;t__Sporosarcina newyorkensis 2681 1 1 4 38 7 5 0 72185 72241 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio diazotrophicus;t__Vibrio diazotrophicus NBRC 103148 0 0 4 0 6 29 0 94287 94326 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__[Ruminococcus] gnavus;t__Ruminococcus gnavus AGR2154 0 3 0 378 974 271 0 72848 74474 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus pentosaceus;t__Pediococcus pentosaceus ATCC 25745 0 0 11 13 135 133 0 36351 36647 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas;s__Zymomonas mobilis;t__Zymomonas mobilis subsp. pomaceae 0 1 7 1 26 0 110 39652 39797 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax mediterranei;t__Haloferax mediterranei ATCC 33500 0 0 2 0 0 0 0 58975 58977 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus senioris;t__Lactobacillus senioris DSM 24302 = JCM 17472 0 0 2 5 8 44 0 31252 31311 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella baltica;t__Shewanella baltica OS678 0 0 57 25 0 392 0 105287 105761 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter harbinensis;t__ 0 3 4 1 7 390 0 56385 56790 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus glucanolyticus;t__ 0 0 0 155 7 113 0 117671 117946 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Oxalobacter;s__Oxalobacter formigenes;t__Oxalobacter formigenes OXCC13 9 0 3 3 12 0 0 48280 48307 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermacetogenium;s__Thermacetogenium phaeum;t__Thermacetogenium phaeum DSM 12270 121 0 50 6 54 0 0 58550 58781 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sakei;t__Lactobacillus sakei subsp. sakei 7 5 27 26 2 76 0 37543 37693 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella colwelliana;t__Shewanella colwelliana ATCC 39565 0 0 0 0 0 11 0 91278 91289 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter pseudonitzschiae;t__ 0 0 1 0 80 0 0 98677 98758 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Pusillimonas;s__Pusillimonas sp. T7-7;t__ 2 35 4 2 57 0 0 77572 77672 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Lonsdalea;s__Lonsdalea quercina;t__Lonsdalea quercina subsp. quercina 0 5 19 130 242 0 0 76530 76926 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Ignatzschineria;s__Ignatzschineria larvae;t__Ignatzschineria larvae DSM 13226 0 0 3 0 2 0 0 48778 48783 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Ferrimonadaceae;g__Ferrimonas;s__Ferrimonas balearica;t__Ferrimonas balearica DSM 9799 0 0 90 48 0 0 0 85445 85583 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas koreensis;t__ 1 14 13 0 0 1377 0 124630 126035 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus duerdenii;t__Peptoniphilus duerdenii ATCC BAA-1640 11 319 0 0 80 201 0 40903 41514 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium barchaimii;t__ 0 48 0 11 2 0 0 70852 70913 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azonexus;s__Azonexus hydrophilus;t__Azonexus hydrophilus DSM 23864 1 1 4 0 21 0 0 66714 66741 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sanguinis;t__Paenibacillus sanguinis 2301083 = DSM 16941 0 3 0 0 0 33 0 95962 95998 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aestuariivita;s__Aestuariivita boseongensis;t__ 16 41 0 1 78 10 0 78469 78615 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Cohnella;s__Cohnella laeviribosi;t__Cohnella laeviribosi DSM 21336 0 0 0 123 5 1 0 89133 89262 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea ananatis;t__Pantoea ananatis LMG 20103 0 0 26 189 41 165 0 93646 94067 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus boroniphilus;t__Bacillus boroniphilus JCM 21738 0 0 1 9 6 55 0 86765 86836 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__gamma proteobacterium HTCC5015;t__ 0 0 181 0 0 0 0 51947 52128 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter mediterraneus;t__Sulfitobacter mediterraneus KCTC 32188 0 0 1 0 101 23 0 82440 82565 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum chlorophenolicum;t__ 0 25 4 92 25 14 64284 41133 105577 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia liquefaciens;t__Serratia liquefaciens ATCC 27592 2 10 28 126 53 512 0 104041 104772 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus mundtii;t__Enterococcus mundtii QU 25 0 0 0 0 0 0 0 6492 6570 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc pseudomesenteroides;t__Leuconostoc pseudomesenteroides PS12 0 0 3 37 22 48 0 38405 38515 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria sp. PCC 10802;t__ 0 0 8 3 0 1 0 170928 170940 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus dendritiformis;t__Paenibacillus dendritiformis C454 0 0 0 3 1 150 0 126982 127136 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio cuneatus;t__Desulfovibrio cuneatus DSM 11391 0 0 0 0 0 1 0 66978 66979 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema brennaborense;t__Treponema brennaborense DSM 12168 185 0 0 0 0 22 0 60904 61111 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia putida;t__ 0 0 28 43 4 171 0 139507 139753 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus acetotolerans;t__ 0 0 0 0 0 66 0 34031 34097 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium undicola;t__Rhizobium undicola ORS 992 = ATCC 700741 1 0 0 3 25 7 0 82539 82575 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dyella;s__Dyella jiangningensis;t__ 0 0 6 17 12 49 0 107855 107939 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Gimesia;s__Gimesia maris;t__Gimesia maris DSM 8797 2 0 0 0 0 0 0 155325 155327 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__Citrobacter amalonaticus;t__ 0 5 29 62 0 0 0 100514 100610 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium mesoamericanum;t__Rhizobium mesoamericanum STM3625 0 0 0 7 28 5493 0 123368 128896 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia marcescens;t__Serratia marcescens subsp. marcescens 27 74 37 230 21 330 0 101557 102276 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus panaciterrae;t__Bacillus panaciterrae DSM 19096 0 0 0 10 0 64 0 107562 107636 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas somerae;t__Porphyromonas somerae DSM 23386 8 1 0 1236 0 49 0 45657 46951 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas profundimaris;t__ 65 14 377 0 3 211 0 75880 76550 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Cedecea;s__Cedecea neteri;t__ 0 16 38 233 319 0 0 96922 97528 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas posidonica;t__Marinomonas posidonica IVIA-Po-181 0 1 65 0 0 41 0 77891 77998 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__;s__Methylococcaceae bacterium 73a;t__ 0 0 3 0 0 0 0 97907 97910 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus pseudofirmus;t__Bacillus pseudofirmus OF4 0 4 24 28 34 340 0 76749 77179 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas sp. StFLB209;t__ 0 27 65 0 0 394 0 126161 126647 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium elkanii;t__Bradyrhizobium elkanii WSM2783 0 0 0 9 28 304 26 197225 197592 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium aurantiacum;t__Exiguobacterium aurantiacum DSM 6208 3 2 20 123 0 294 146 60162 60750 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Petrotogales;f__;g__Petrotoga;s__Petrotoga mobilis;t__Petrotoga mobilis SJ95 0 0 13 0 0 0 0 43377 43390 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus equigenerosi;t__Lactobacillus equigenerosi DSM 18793 = JCM 14505 0 0 1 0 0 2 0 31788 31791 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc mesenteroides;t__Leuconostoc mesenteroides subsp. mesenteroides 1 1 9 59 42 241 0 40414 40767 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter sulfurreducens;t__Geobacter sulfurreducens PCA 0 0 0 10 0 6 0 76266 76282 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosaetaceae;g__Methanosaeta;s__Methanosaeta concilii;t__Methanosaeta concilii GP6 0 0 0 2 0 0 0 60170 60172 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanococcus;s__Methanococcus maripaludis;t__Methanococcus maripaludis X1 0 0 0 0 2 120 0 34811 34933 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Neptuniibacter;s__Neptuniibacter caesariensis;t__ 0 5 7 1 0 0 0 77338 77351 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Anoxybacillus;s__Anoxybacillus tepidamans;t__Anoxybacillus tepidamans PS2 0 0 0 1 25 6 0 67108 67140 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__;s__Geomicrobium sp. JCM 19039;t__ 0 1 1 5 0 1 0 83292 83300 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__Enterobacteriaceae bacterium B14;t__ 0 0 7 33 7 0 0 74214 74261 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix;s__Thiothrix nivea;t__Thiothrix nivea DSM 5205 0 0 4 0 0 0 0 93783 93787 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinomonas;s__Marinomonas fungiae;t__ 0 0 142 0 0 16 0 83502 83660 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. NKBG15041c;t__ 0 0 10 6 0 37 0 63467 63520 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__Ruminococcaceae bacterium AB4001;t__ 0 0 0 1 1 0 0 64845 64847 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium caeni;t__Chryseobacterium caeni DSM 17710 0 0 0 0 7 74 0 82198 82279 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Rufibacter;s__Rufibacter sp. DG31D;t__ 0 0 0 0 3 0 0 96412 96415 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfurimonas;s__Sulfurimonas gotlandica;t__Sulfurimonas gotlandica GD1 0 0 8 9 0 61 0 58975 59053 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia gladioli;t__ 0 2 3 22 19 133 0 171740 171919 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas chelatiphaga;t__ 0 0 0 0 0 0 0 79080 79080 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum chlorophenolicum;t__Herbaspirillum chlorophenolicum NBRC 102525 0 0 3 101 5 0 5 105622 105736 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio pacinii;t__Vibrio pacinii DSM 19139 0 0 0 0 1 140 0 85711 85852 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Rhodopirellula;s__Rhodopirellula maiorica;t__Rhodopirellula maiorica SM1 0 0 0 0 0 10 0 175309 175319 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia sp. NR 4-1;t__ 0 0 24 39 0 0 0 127165 127228 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas rhizosphaerae;t__ 0 0 31 0 0 416 0 93325 93772 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Saccharospirillaceae;g__Reinekea;s__Reinekea blandensis;t__Reinekea blandensis MED297 0 1 31 3 0 0 0 89980 90015 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella woodyi;t__Shewanella woodyi ATCC 51908 0 0 44 24 0 457 0 118183 118708 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella londiniensis;t__ 0 0 6 0 0 4 0 47874 47884 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Hungatella;s__Hungatella hathewayi;t__Hungatella hathewayi DSM 13479 12 5 0 903 56 0 0 129116 130092 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Thauera;s__Thauera aminoaromatica;t__Thauera aminoaromatica S2 0 232 158 0 21 270 0 84329 85010 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconobacter;s__Gluconobacter morbifer;t__Gluconobacter morbifer G707 0 1 0 0 36 19 0 57651 57707 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__;s__Xanthobacteraceae bacterium 501b;t__ 0 2 7 24 35 0 0 102082 102150 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylocaldum;s__Methylocaldum szegediense;t__Methylocaldum szegediense O-12 1 1 4 0 6 0 0 100020 100032 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Gallionellales;f__Gallionellaceae;g__Ferriphaselus;s__Ferriphaselus sp. R-1;t__ 0 3 45 0 164 0 0 48571 48783 k__Bacteria;p__Bacteroidetes;c__Chitinophagia;o__Chitinophagales;f__Chitinophagaceae;g__Terrimonas;s__Terrimonas ferruginea;t__Terrimonas ferruginea DSM 30193 0 1 0 0 3 0 0 93579 93583 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio magneticus;t__Desulfovibrio magneticus RS-1 0 0 0 1 1 21 0 104937 104960 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus sp. NK3A76;t__ 0 1 0 8 6 223 0 70982 71220 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. 10(H);t__ 2 0 0 8 0 0 0 85958 85968 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus massiliensis;t__Oceanobacillus massiliensis str. N'diop 14 0 0 1 126 3 0 70418 70562 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus siliginis;t__ 0 0 4 11 0 172 0 40502 40689 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia bellii;t__Rickettsia bellii RML369-C 0 0 0 0 0 26 0 30415 30441 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus capitis;t__ 7 5 4 17 0 121 8176 43575 52042 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__Melissococcus plutonius;t__Melissococcus plutonius ATCC 35311 0 4 4 5 65 0 0 37742 37820 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Labrenzia;s__Labrenzia alba;t__ 0 0 7 0 117 47 0 119620 119791 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus sk1;t__ 0 0 0 0 0 5 0 564 569 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella enoeca;t__ 0 1 0 0 0 4 0 57223 57228 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus salivarius;t__Lactobacillus salivarius UCC118 0 0 16 11 5 53 0 36457 36542 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus chagannorensis;t__Bacillus chagannorensis DSM 18086 0 0 0 1 0 0 0 70263 70264 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Asaia;s__Asaia bogorensis;t__Asaia bogorensis NBRC 16594 0 1 4 0 0 0 0 63960 63965 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio fluvialis;t__ 0 0 52 0 36 562 0 95902 96552 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sucicola;t__Lactobacillus sucicola DSM 21376 = JCM 15457 1 0 3 3 1 153 0 48904 49065 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus ictaluri;t__Streptococcus ictaluri 707-05 0 0 0 15 0 252 0 44372 44675 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Orbales;f__Orbaceae;g__Gilliamella;s__Gilliamella apicola;t__ 15 90 194 0 186 0 0 62303 62788 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus mitis;t__Streptococcus mitis B6 2 84 7 205 0 498 0 42096 42932 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira chilensis;t__Thiomicrospira chilensis DSM 12352 0 1 8 0 13 5 0 48777 48804 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus epidermidis;t__Staphylococcus epidermidis ATCC 12228 11 24 3 12 0 596 0 49306 49985 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK633;t__ 0 0 0 188 47 420 0 175 830 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Chryseobacterium;s__Chryseobacterium gregarium;t__Chryseobacterium gregarium DSM 19109 0 0 0 0 8 88 0 88590 88686 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomicrobium;s__Methylomicrobium agile;t__ 0 0 18 0 52 2 0 90444 90516 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Shimwellia;s__Shimwellia blattae;t__Shimwellia blattae DSM 4481 = NBRC 105725 0 6 23 177 109 0 0 82859 83174 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Saccharospirillaceae;g__Saccharospirillum;s__Saccharospirillum impatiens;t__Saccharospirillum impatiens DSM 12546 0 1 1 1 2 0 0 94433 94438 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__Ferroplasmaceae;g__Acidiplasma;s__Acidiplasma aeolicum;t__ 0 0 0 32 0 0 0 34994 35026 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__Mogibacterium;s__Mogibacterium timidum;t__Mogibacterium timidum ATCC 33093 22 53 0 133 38 0 0 35821 36067 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Blastopirellula;s__Blastopirellula marina;t__Blastopirellula marina DSM 3645 0 0 0 0 0 0 0 132958 132958 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Rheinheimera;s__Rheinheimera sp. KL1;t__ 0 0 6 0 0 0 0 85803 85809 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__;g__;s__Rickettsiales bacterium Ac37b;t__ 0 0 2 0 0 0 0 37022 37024 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Helicoverpa armigera nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2615 2615 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter sp. TB15;t__ 0 2 2 0 12 383 0 60852 61251 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__European mountain ash ringspot-associated emaravirus;t__ 0 0 0 0 0 0 0 240 240 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Drosophila melanogaster;t__ 0 0 0 0 0 103 0 25252 25355 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma imitans;t__Mycoplasma imitans ATCC 51306 0 0 0 0 0 144 0 18195 18339 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. KNHs205;t__ 0 2 0 67 0 3 0 127138 127210 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeobacter;s__Phaeobacter sp. 11ANDIMAR09;t__ 0 0 0 0 127 23 0 93860 94010 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Fervidicella;s__Fervidicella metallireducens;t__Fervidicella metallireducens AeB 0 0 0 302 108 0 0 57129 57539 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Kingella;s__Kingella oralis;t__Kingella oralis ATCC 51147 0 0 0 1 23 0 0 48074 48098 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Pelobacter;s__Pelobacter seleniigenes;t__Pelobacter seleniigenes DSM 18267 0 0 245 9 2 8 0 101494 101758 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus str. MIT 9313 0 0 2 0 0 0 14 48201 48217 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Dysgonamonadaceae;g__Dysgonomonas;s__Dysgonomonas sp. HGC4;t__ 106 1 0 4 0 0 0 89389 89500 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__Citrobacter freundii;t__Citrobacter freundii CFNIH1 13 75 185 229 1041 1062 0 99317 101980 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus iners;t__Lactobacillus iners DSM 13335 12 23 0 0 0 18 0 25297 25350 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Sodalis;s__Sodalis praecaptivus;t__ 0 1 15 99 97 171 0 93807 94190 k__Bacteria;p__Tenericutes;c__;o__;f__;g__Candidatus Izimaplasma;s__Candidatus Izimaplasma sp. HR1;t__ 1 0 0 0 0 0 0 37573 37574 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter sputorum;t__Campylobacter sputorum biovar sputorum 4 3 0 0 0 21 0 35483 35511 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Pseudothermotoga;s__Pseudothermotoga lettingae;t__Pseudothermotoga lettingae TMO 0 0 0 0 0 0 0 42706 42706 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus C;t__Human adenovirus 1 0 0 0 0 0 0 279 441 720 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter gerneri;t__Acinetobacter gerneri DSM 14967 = CIP 107464 16 5 7 0 42 467 0 89708 90245 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium TWA4;t__ 0 0 0 0 0 0 0 58522 58522 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella multisaccharivorax;t__Prevotella multisaccharivorax DSM 17128 0 2 0 4 0 242 0 67450 67698 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage A500;t__ 0 0 0 0 0 8 0 769 777 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes senegalensis;t__Alistipes senegalensis JC50 0 1 0 100 0 2381 0 77145 79627 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hayakitensis;t__Lactobacillus hayakitensis DSM 18933 = JCM 14209 0 0 1 4 1 72 0 33114 33192 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio proteoclasticus;t__Butyrivibrio proteoclasticus B316 0 8 0 6 83 406 109 76528 77140 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Alkaliphilus;s__Alkaliphilus transvaalensis;t__Alkaliphilus transvaalensis ATCC 700919 0 8 0 0 10 6 0 80357 80381 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelatoclostridium;s__[Clostridium] saccharogumia;t__[Clostridium] saccharogumia DSM 17460 0 113 0 0 17 16 0 62428 62574 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. RS9917;t__ 0 0 2 22 0 37 0 51514 51575 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella bovis;t__Bartonella bovis 91-4 0 0 0 13 0 41 0 32367 32421 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7335;t__ 0 0 0 2 0 1 0 119210 119213 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Nonlabens;s__Nonlabens dokdonensis;t__Nonlabens dokdonensis DSW-6 0 0 0 0 13 54 0 78225 78292 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas simiae;t__ 49 83 137 0 0 109 0 78775 79153 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium sp. B17;t__ 48 3 0 0 95 0 0 81834 81980 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella bacilliformis;t__Bartonella bacilliformis KC583 2 0 3 28 0 53 719 28095 28900 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halobacillus;s__Halobacillus trueperi;t__ 1 0 10 12 383 510 0 80731 81647 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caloramator;s__Caloramator mitchellensis;t__ 3 1 19 12 3 22 0 48225 48285 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus pumilus;t__ 18 0 21 19 51 135 0 75507 75751 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta cellobiosiphila;t__Spirochaeta cellobiosiphila DSM 17781 0 0 0 0 0 1 0 78835 78836 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-TIM68;t__ 0 0 0 0 0 0 0 3947 3947 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Tepidanaerobacter;s__Tepidanaerobacter acetatoxydans;t__Tepidanaerobacter acetatoxydans Re1 0 0 0 0 0 38 0 55187 55225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Cricetid gammaherpesvirus 2;t__ 0 0 0 0 0 0 0 2486 2486 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Herbevirus;s__Shuangao insect herbevirus 1;t__Shuangao Insect Virus 1 0 0 0 0 0 0 0 262 262 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Sporosarcina;s__Sporosarcina koreensis;t__ 2 0 3 73 15 8 0 58134 58235 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Ostreococcus lucimarinus virus 2;t__ 0 8 0 0 962 242 0 2713 3925 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Hapalosiphonaceae;g__Mastigocladus;s__Mastigocladus laminosus;t__Mastigocladus laminosus UU774 1 0 0 0 0 0 0 141358 141359 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma turonicum;t__ 0 0 1 0 0 73 0 25153 25227 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium lablabi;t__ 0 0 0 1 16 40 0 165332 165389 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria newyorkensis;t__ 0 1 11 12 0 136 0 67924 68084 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Leptotrichia;s__Leptotrichia goodfellowii;t__Leptotrichia goodfellowii DSM 19756 0 0 0 0 0 11 0 45606 45617 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter soli;t__ 0 0 0 0 0 0 0 3938 3948 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium selenitireducens;t__Rhizobium selenitireducens ATCC BAA-1503 0 0 0 5 26 14 0 99394 99439 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium TF01-11;t__ 8 16 0 405 629 17 0 70924 71999 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus senegalensis;t__Paenibacillus senegalensis JC66 0 0 0 21 4 321 0 109190 109536 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Hippea;s__Hippea sp. KM1;t__ 2 0 0 0 0 11 0 34833 34846 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella longbeachae;t__Legionella longbeachae NSW150 0 0 21 0 12 177 0 81299 81509 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus wulumuqiensis;t__Deinococcus wulumuqiensis R13 8 0 0 0 0 197 0 65011 65217 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia rubra;t__Leifsonia rubra CMS 76R 826 0 2 1 24 0 0 54266 55119 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Komagataeibacter;s__Komagataeibacter hansenii;t__Komagataeibacter hansenii ATCC 23769 0 0 0 0 256 0 0 70552 70809 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella saoudiensis;t__ 0 0 6 0 0 135 0 76758 76899 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas testosteroni;t__Comamonas testosteroni TK102 0 55 6 121 686 761 0 119625 121254 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methyloglobulus;s__Methyloglobulus morosus;t__Methyloglobulus morosus KoM1 0 13 35 0 2 0 0 82326 82391 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Neorickettsia;s__Neorickettsia helminthoeca;t__Neorickettsia helminthoeca str. Oregon 0 0 0 0 0 0 0 17684 17684 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus anthracis;t__Bacillus anthracis str. Ames 1 6 14 28 44 160 103923 366 104545 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Kallithea virus;t__ 0 0 0 0 0 0 0 3047 3047 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium sp. AB3007;t__ 0 0 0 31 0 0 0 46004 46035 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobium;s__Thalassobium sp. R2A62;t__ 0 0 1 0 40 0 0 69700 69741 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage phiL47;t__ 0 0 0 1 0 27 0 2542 2570 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Desulfuromonas;s__Desulfuromonas sp. TF;t__ 0 0 0 1 0 0 0 87632 87633 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus columbae;t__Enterococcus columbae DSM 7374 = ATCC 51263 24 34 23 33 19 208 0 50826 51167 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp. AKL17;t__ 0 0 2 0 0 0 0 55974 55976 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter coli;t__ 0 0 1 1 3 451 0 40222 40678 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Catonella;s__Catonella morbi;t__Catonella morbi ATCC 51271 27 28 0 245 20 0 0 69180 69500 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella intermedia;t__Prevotella intermedia 17 0 3 0 1 2 33 0 53947 53986 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium FE2018;t__ 0 0 0 8 7 33 0 64004 64052 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Oribacterium;s__Oribacterium sp. oral taxon 078;t__Oribacterium sp. oral taxon 078 str. F0262 1 1 0 231 14 0 0 53125 53372 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Desnuesiella;s__Desnuesiella massiliensis;t__ 0 0 0 0 9 0 0 110009 110018 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroserpens;s__Psychroserpens mesophilus;t__ 2 0 0 0 42 61 0 73372 73477 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Candidatus Baumannia cicadellinicola;t__ 0 0 5 0 0 0 6 15177 15188 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium nucleatum;t__ 0 0 0 0 0 0 2 42747 42749 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanothermobacter;s__Methanothermobacter marburgensis;t__Methanothermobacter marburgensis str. Marburg 0 0 0 0 3 542 0 32148 32693 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__;s__[Eubacterium] brachy;t__Eubacterium brachy ATCC 33089 6 14 0 42 7 7 0 30749 30825 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Mageeibacillus;s__Mageeibacillus indolicus;t__Mageeibacillus indolicus UPII9-5 2 491 0 30 0 0 0 35671 36194 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Woodsholea;s__Woodsholea maritima;t__Woodsholea maritima DSM 17123 0 1 7 0 0 0 0 62026 62034 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus helveticus;t__Lactobacillus helveticus CNRZ32 3 1 2 35 3 1535 0 42940 44519 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter sp. MX01;t__ 0 0 0 0 6 45 0 46141 46192 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera methylohalidivorans;t__Leisingera methylohalidivorans DSM 14336 0 0 2 0 199 60 0 82626 82887 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium;s__Cardiobacterium valvarum;t__Cardiobacterium valvarum F0432 1 1 1 0 0 0 0 50579 50582 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus massiliensis;t__Streptococcus massiliensis DSM 18628 13 42 0 3 0 84 0 36941 37083 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Scytonemataceae;g__Scytonema;s__Scytonema tolypothrichoides;t__Scytonema tolypothrichoides VB-61278 15 0 5 20 0 0 0 154799 154839 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter suis;t__Helicobacter suis HS1 0 0 0 3 0 14 0 32436 32453 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kimchicus;t__Lactobacillus kimchicus JCM 15530 0 0 1 1 0 48 0 51729 51779 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio maritimus;t__ 0 0 2 0 3 256 0 114192 114453 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter pullorum;t__Helicobacter pullorum MIT 98-5489 26 0 0 3 0 10 0 38093 38132 k__Bacteria;p__;c__;o__Haloplasmatales;f__Haloplasmataceae;g__Haloplasma;s__Haloplasma contractile;t__Haloplasma contractile SSD-17B 3 0 0 0 0 0 0 68025 68028 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas;s__Defluviimonas sp. 20V17;t__ 5 0 1 0 24 0 0 84725 84755 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus crustorum;t__ 0 0 7 5 3 364 0 44850 45229 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium resinovorum;t__ 0 0 0 0 0 0 0 60828 62790 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;t__Truepera radiovictrix DSM 17093 0 0 0 0 0 0 0 65207 65207 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Dichelobacter;s__Dichelobacter nodosus;t__Dichelobacter nodosus VCS1703A 4 27 3 0 7 0 0 27745 27786 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfitobacterium;s__Desulfitobacterium hafniense;t__Desulfitobacterium hafniense DCB-2 0 0 0 0 46 203 0 105333 105582 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomassiliicoccaceae;g__Methanomassiliicoccus;s__Candidatus Methanomassiliicoccus intestinalis;t__Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 0 0 0 0 0 0 0 38633 38633 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium MA2020;t__ 0 0 0 0 0 0 0 74396 74396 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia kururiensis;t__Paraburkholderia kururiensis subsp. thiooxydans 0 0 1 6 21 25 0 135691 135744 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia pecorum;t__Chlamydophila pecorum E58 0 0 0 0 0 12 0 22111 22123 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] sporosphaeroides;t__[Clostridium] sporosphaeroides DSM 1294 0 0 0 87 1 36 0 63302 63426 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__Anaerobiospirillum;s__Anaerobiospirillum succiniciproducens;t__Anaerobiospirillum succiniciproducens DSM 6400 1 0 0 0 0 0 0 75615 75616 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella pneumophila;t__Legionella pneumophila subsp. pneumophila 0 0 13 0 11 144 0 67787 67955 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Faecalitalea;s__Faecalitalea cylindroides;t__Faecalitalea cylindroides T2-87 0 565 0 0 1 0 0 31955 32521 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. PCC 6406;t__ 1 0 8 9 2 4 0 115206 115230 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus megaterium;t__Bacillus megaterium NBRC 15308 = ATCC 14581 0 0 0 0 0 0 0 7659 8061 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus wasatchensis;t__ 0 0 3 0 0 30 0 37857 37890 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muricauda;s__Muricauda ruestringensis;t__Muricauda ruestringensis DSM 13258 0 0 0 0 20 0 0 76828 76848 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Eggerthia;s__Eggerthia catenaformis;t__Eggerthia catenaformis OT 569 = DSM 20559 26 764 0 0 32 0 0 37828 38650 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. Heron Island J;t__ 0 0 0 1 0 88 0 160973 161062 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Terriglobus;s__Terriglobus roseus;t__Terriglobus roseus DSM 18391 0 0 0 0 0 0 0 104557 104557 k__Bacteria;p__Cyanobacteria;c__Gloeobacteria;o__Gloeobacterales;f__Gloeobacteraceae;g__Gloeobacter;s__Gloeobacter kilaueensis;t__Gloeobacter kilaueensis JS1 1 1 0 0 0 19 0 94474 94495 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes shahii;t__Alistipes shahii WAL 8301 0 1 0 688 0 0 0 71932 72621 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alteromonas;s__Alteromonas stellipolaris;t__ 0 0 26 26 7 71 0 92910 93040 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Trichechus manatus latirostris papillomavirus 2;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Klebsiella phage K64-1;t__ 0 0 0 0 0 3139 0 3785 6924 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella valaisiana;t__Borreliella valaisiana Tom4006 0 0 0 0 4 159 0 18075 18238 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio mexicanus;t__ 0 0 2 0 2 29 0 95920 95953 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Aphanizomenonaceae;g__Raphidiopsis;s__Raphidiopsis brookii;t__Raphidiopsis brookii D9 19 0 11 12 5 0 0 63590 63642 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Gardnerella;s__Gardnerella vaginalis;t__Gardnerella vaginalis 409-05 12 1 0 0 18 0 0 32319 32350 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Agarivorans;s__Agarivorans gilvus;t__ 0 0 54 35 13 62 0 88167 88331 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma lipofaciens;t__Mycoplasma lipofaciens ATCC 35015 0 0 0 0 0 39 0 15453 15492 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillales Family X. Incertae Sedis;g__Thermicanus;s__Thermicanus aegyptius;t__Thermicanus aegyptius DSM 12793 63 30 1 6 0 0 0 73016 73116 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Ornithinibacillus;s__Ornithinibacillus scapharcae;t__Ornithinibacillus scapharcae TW25 0 0 1 0 21 37 0 76675 76734 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Arthrospira;s__Arthrospira platensis;t__Arthrospira platensis NIES-39 3 0 7 13 10 0 0 133793 133826 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sulfidigenes;t__ 27 332 0 3 1 39 0 73767 74169 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus proteolyticus;t__Deinococcus proteolyticus MRP 0 0 0 0 0 0 0 14542 14790 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma multilocale;t__Acholeplasma multilocale ATCC 49900 1 0 29 0 0 0 0 18439 18469 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Candidatus Aquiluna;s__Candidatus Aquiluna sp. IMCC13023;t__ 0 0 1 0 6 0 0 27181 27188 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. NT-26;t__ 0 1 1 18 98 32 0 84644 84794 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Drosophila simulans;t__Wolbachia endosymbiont of Drosophila simulans wNo 0 0 0 0 0 3076 0 22960 26036 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Caldimonas;s__Caldimonas manganoxidans;t__Caldimonas manganoxidans ATCC BAA-369 0 51 147 29 32 0 0 70207 70466 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Liberibacter;s__Candidatus Liberibacter asiaticus;t__Candidatus Liberibacter asiaticus str. gxpsy 0 0 0 1 3 73 0 24258 25364 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bdellovibrionaceae;g__Bdellovibrio;s__Bdellovibrio bacteriovorus;t__Bdellovibrio bacteriovorus HD100 0 0 0 0 0 0 0 75658 75658 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Lyngbya;s__Lyngbya confervoides;t__Lyngbya confervoides BDU141951 19 0 14 0 2 0 0 155501 155536 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rudaea;s__Rudaea cellulosilytica;t__Rudaea cellulosilytica DSM 22992 0 0 1 12 6 0 0 86830 86849 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Sutterellaceae;g__Sutterella;s__Sutterella wadsworthensis;t__Sutterella wadsworthensis HGA0223 0 0 1 15 10 0 0 58883 58909 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus bicirculans;t__ 0 0 0 8 2 50 0 59308 59368 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf339;t__ 42 10 4 0 4 257 0 77797 78114 k__Bacteria;p__Firmicutes;c__Clostridia;o__Natranaerobiales;f__Natranaerobiaceae;g__Natranaerobius;s__Natranaerobius thermophilus;t__Natranaerobius thermophilus JW/NM-WN-LF 0 3 5 0 0 0 0 63303 63311 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Taterapox virus;t__ 0 0 0 0 1 1865 0 2094 3960 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus grossensis;t__Peptoniphilus grossensis ph5 6 364 1 0 336 615 0 39130 40452 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. JA-3-3Ab;t__ 0 1 4 1 0 0 0 58649 58655 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas cangingivalis;t__Porphyromonas cangingivalis JCM 15983 0 1 0 9 0 1 0 47023 47034 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus cohnii;t__Staphylococcus cohnii subsp. cohnii 22 10 1 13 0 501 0 55863 56496 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Actibacterium;s__Actibacterium atlanticum;t__ 0 0 1 0 324 4 0 63157 63486 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus youngiae;t__Desulfosporosinus youngiae DSM 17734 0 1 0 20 91 83 0 113012 113207 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Proboscivirus;s__Elephant endotheliotropic herpesvirus 4;t__ 0 0 0 0 0 0 0 4117 4117 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus fonticola;t__Paenibacillus fonticola DSM 21315 0 0 0 1 0 8 0 125950 125959 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus polymyxa;t__Paenibacillus polymyxa SC2 0 1 0 38 24 463 0 114041 114567 k__Bacteria;p__Elusimicrobia;c__Endomicrobia;o__Endomicrobiales;f__Endomicrobiaceae;g__Endomicrobium;s__Endomicrobium proavitum;t__ 0 0 0 0 0 0 0 31779 31779 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Ureibacillus;s__Ureibacillus thermosphaericus;t__Ureibacillus thermosphaericus str. Thermo-BF 0 0 0 12 2 0 0 56790 56804 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caloramator;s__Caloramator australicus;t__Caloramator australicus RC3 0 0 3 5 15 0 0 52452 52475 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelatoclostridium;s__[Clostridium] innocuum;t__[Clostridium] innocuum 2959 55 452 0 0 179 0 0 94722 95408 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__;s__Suid betaherpesvirus 2;t__ 0 0 0 0 0 0 0 2567 2567 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Yatapoxvirus;s__Yaba monkey tumor virus;t__ 0 0 0 0 0 0 0 2694 2694 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio coralliilyticus;t__ 0 0 22 0 16 571 0 106429 107038 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__Phocaeicola;s__Phocaeicola abscessus;t__Phocaeicola abscessus CCUG 55929 0 1 0 437 0 0 0 50111 50549 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides uniformis;t__Bacteroides uniformis ATCC 8492 8 3 0 454 0 156 0 93636 94257 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanococcoides;s__Methanococcoides burtonii;t__Methanococcoides burtonii DSM 6242 0 0 0 0 10 0 0 51490 51500 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfohalobium;s__Desulfohalobium retbaense;t__Desulfohalobium retbaense DSM 5692 0 0 0 2 0 0 0 57284 57286 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter;s__Thermoanaerobacter sp. YS13;t__ 0 5 1 13 140 2113 0 51897 54169 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cronobacter phage S13;t__ 0 0 0 0 0 0 0 3642 3642 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces flavidovirens;t__Streptomyces flavidovirens DSM 40150 0 0 4 0 0 219 0 141080 141303 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces phaeochromogenes;t__ 1 0 3 0 0 513 0 216651 217168 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Rhodopirellula;s__Rhodopirellula sallentina;t__Rhodopirellula sallentina SM41 0 0 0 0 0 40 0 162768 162808 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. ND2;t__ 0 0 0 1 6 181 0 74444 74632 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Anaerofustis;s__Anaerofustis stercorihominis;t__Anaerofustis stercorihominis DSM 17244 0 0 0 0 0 0 0 45681 45681 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidiphilium;s__Acidiphilium angustum;t__Acidiphilium angustum ATCC 35903 0 0 1 0 7 0 0 83111 83119 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Zymobacter;s__Zymobacter palmae;t__Zymobacter palmae DSM 10491 1 0 3 1 2 0 0 59226 59233 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Sodalis;s__Sodalis glossinidius;t__Sodalis glossinidius str. 'morsitans' 0 0 0 0 0 0 0 2412 2423 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. GFAJ-1;t__ 0 0 6 0 0 30 0 72049 72085 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella sp. FSC1006;t__ 0 0 1 0 0 158 0 40160 40319 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Anaerostipes;s__Anaerostipes hadrus;t__Anaerostipes hadrus DSM 3319 0 30 0 306 271 5 0 54626 55238 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocorpusculaceae;g__Methanocorpusculum;s__Methanocorpusculum labreanum;t__Methanocorpusculum labreanum Z 0 0 0 2 0 0 0 36097 36099 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium periodonticum;t__Fusobacterium periodonticum 2_1_31 14 0 0 3 0 147 0 49179 49343 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis;t__ 0 0 0 0 0 0 0 2758 2758 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides mangenotii;t__Clostridioides mangenotii LM2 0 5 0 8 82 32 0 60348 60475 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Persephonella;s__Persephonella sp. KM09-Lau-8;t__ 0 0 0 0 0 23 0 41471 41494 k__Bacteria;p__Aquificae;c__Aquificae;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Thermovibrio;s__Thermovibrio ammonificans;t__Thermovibrio ammonificans HB-1 0 0 0 0 21 0 0 33638 33659 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia coriaceae;t__Borrelia coriaceae Co53 0 0 0 0 6 18 0 18232 18256 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides thetaiotaomicron;t__Bacteroides thetaiotaomicron VPI-5482 0 5 0 71 0 1146 0 123985 125207 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium bornimense;t__ 13 404 0 126 29 105 0 71661 72338 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus parasanguinis;t__Streptococcus parasanguinis ATCC 15912 0 0 1 19 0 227 0 42826 43073 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Pontibacter;s__Pontibacter actiniarum;t__Pontibacter actiniarum DSM 19842 0 0 0 0 0 38 0 98967 99005 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Sellimonas;s__Sellimonas intestinalis;t__ 0 3 0 3 373 0 0 63339 63718 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Saccharibacillus;s__Saccharibacillus sacchari;t__Saccharibacillus sacchari DSM 19268 1 0 0 3 28 10 0 121370 121412 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia felis;t__Rickettsia felis URRWXCal2 0 1 0 0 0 358 0 29343 29702 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus gallinarum;t__ 0 0 0 3 0 5 0 62929 62938 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus sp. AT10;t__ 0 345 0 307 14 3 0 60682 61351 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus smithii;t__ 6 0 19 47 172 268 0 66863 67375 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus marimammalium;t__Streptococcus marimammalium DSM 18627 0 0 0 2 0 33 0 29960 29995 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halobacillus;s__Halobacillus halophilus;t__Halobacillus halophilus DSM 2266 0 0 7 2 98 0 0 82905 83012 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas cryotolerans;t__Nitrosomonas cryotolerans ATCC 49181 0 0 2 0 0 0 0 58559 58561 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium minimum;t__ 15 0 1 0 0 14 0 37795 37825 k__Viruses;p__unclassified viruses;c__Kaumoebavirus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 7012 7012 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio alginolyticus;t__ 0 0 14 0 26 262 0 103903 104205 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Brucellaceae;g__Ochrobactrum;s__Ochrobactrum pseudogrignonense;t__ 0 0 0 65 0 0 0 99789 99854 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P100virus;s__Listeria virus P100;t__Listeria phage LP-083-2 0 0 0 0 775 336 672 933 2716 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus thermophilus;t__Streptococcus thermophilus JIM 8232 3 0 16 97 0 137 812 37404 38598 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cucurbit yellow mosaic alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Cercopithecine betaherpesvirus 5;t__ 0 0 0 0 0 0 0 4524 4524 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__;s__[Clostridium] hiranonis;t__[Clostridium] hiranonis DSM 13275 0 1 0 6 25 0 0 48244 48276 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus sobrinus;t__Streptococcus sobrinus DSM 20742 = ATCC 33478 0 0 0 0 0 28 0 42630 42658 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. CL-6;t__ 0 0 0 3 6 150 0 86314 86473 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Coprococcus;s__Coprococcus eutactus;t__Coprococcus eutactus ATCC 27759 0 140 0 131 927 40 0 60745 61983 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella brevis;t__Prevotella brevis ATCC 19188 0 0 0 0 0 1 0 69738 69739 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella saccharolytica;t__Prevotella saccharolytica JCM 17484 0 0 0 2 7 480 0 58866 59355 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Acaryochloridaceae;g__Acaryochloris;s__Acaryochloris marina;t__Acaryochloris marina MBIC11017 0 0 5 7 0 0 0 130062 130074 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus fordii;t__Bacillus fordii DSM 16014 = CIP 108821 0 0 0 0 23 43 0 89960 90026 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus massiliensis;t__Paenibacillus massiliensis 2301065 = DSM 16942 0 0 0 2 1 14 0 127611 127628 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus inopinatus;t__ 6 0 66 14 1454 678 0 39770 41992 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter senegalensis;t__ 3 5 3 0 268 373 0 77145 77797 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus lugdunensis;t__Staphylococcus lugdunensis HKU09-01 0 16 1 18 0 319 0 52810 53167 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella albensis;t__Prevotella albensis DSM 11370 = JCM 12258 0 1 0 8 5 138 0 53090 53242 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium sp. 14-2;t__ 0 9 0 2349 0 0 0 77208 79566 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Akkermansia;s__Akkermansia muciniphila;t__Akkermansia muciniphila ATCC BAA-835 2 0 0 1 0 0 0 53279 53282 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira sp. Kp2;t__ 0 0 12 0 18 58 0 54426 54514 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Cesiribacter;s__Cesiribacter andamanensis;t__Cesiribacter andamanensis AMV16 0 0 0 0 1 0 0 94745 94746 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Ostreococcus lucimarinus virus 7;t__ 0 21 0 0 134 923 0 2568 3646 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC3007;t__ 0 0 0 0 3 169 0 58573 58745 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Marinilabiliales;f__Marinifilaceae;g__Marinifilum;s__Marinifilum fragile;t__Marinifilum fragile JCM 15579 0 0 2 1 0 0 0 94226 94229 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella piezotolerans;t__Shewanella piezotolerans WP3 0 0 51 13 0 385 0 107480 107929 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanothermococcus;s__Methanothermococcus thermolithotrophicus;t__Methanothermococcus thermolithotrophicus DSM 2095 0 0 0 2 96 0 0 33540 33638 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Glaciecola;s__Glaciecola punicea;t__Glaciecola punicea ACAM 611 0 0 3 12 0 0 0 61454 61469 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Neorickettsia;s__Neorickettsia risticii;t__Neorickettsia risticii str. Illinois 0 0 0 0 0 92 0 17507 17599 k__Bacteria;p__Caldiserica;c__Caldisericia;o__Caldisericales;f__Caldisericaceae;g__Caldisericum;s__Caldisericum exile;t__Caldisericum exile AZM16c01 0 0 0 0 0 0 0 31162 31162 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Jeotgalicoccus;s__Jeotgalicoccus psychrophilus;t__Jeotgalicoccus psychrophilus DSM 19085 0 0 0 1 48 0 0 46777 46834 k__Bacteria;p__Bacteroidetes;c__;o__;f__;g__;s__Cytophagales bacterium B6;t__ 92 120 0 0 0 0 0 105478 105690 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus piscium;t__Lactococcus piscium MKFS47 0 0 0 10 0 0 0 1992 2176 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfurimonas;s__Sulfurimonas autotrophica;t__Sulfurimonas autotrophica DSM 16294 0 0 7 6 4 14 0 43032 43063 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caloranaerobacter;s__Caloranaerobacter sp. TR13;t__ 0 1 0 1 1 0 0 45133 45136 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracollinoides;t__ 0 0 0 0 0 0 0 2834 3722 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma gallinarum;t__Mycoplasma gallinarum DSM 19816 0 0 0 0 0 39 0 16606 16645 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Acetomicrobium;s__Acetomicrobium hydrogeniformans;t__Acetomicrobium hydrogeniformans ATCC BAA-1850 107 0 0 0 0 0 0 42358 42465 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia billingiae;t__Erwinia billingiae Eb661 0 3 22 210 27 230 0 101511 102003 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidomonas;s__Acidomonas methanolica;t__Acidomonas methanolica NBRC 104435 0 8 9 0 1239 0 0 71516 72772 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio;s__Anaerovibrio lipolyticus;t__Anaerovibrio lipolyticus LB2005 0 0 3 0 0 0 0 53563 53566 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira wolffii;t__Leptospira wolffii serovar Khorat 0 0 0 0 0 0 0 87975 87975 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcidiopsidales;f__Chroococcidiopsidaceae;g__Aliterella;s__Aliterella atlantica;t__Aliterella atlantica CENA595 0 0 20 0 1 0 0 105183 105204 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Chelonobacter;s__Chelonobacter oris;t__ 0 0 57 0 6 0 0 52088 52151 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mellifer;t__ 0 1 2 0 0 3 0 33592 33598 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium bombi;t__Bifidobacterium bombi DSM 19703 0 0 0 0 3 10 0 37886 37899 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Holdemania;s__Holdemania massiliensis;t__Holdemania massiliensis AP2 19 587 0 0 6 0 0 74414 75026 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv6;o__;f__;g__;s__;t__ 0 852 0 0 0 0 0 4 856 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus massiliensis;t__ 0 0 0 14 0 0 0 98796 98810 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter arboriphilus;t__Methanobrevibacter arboriphilus ANOR1 0 0 0 0 0 3 0 44411 44414 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter cibarius;t__Arcobacter cibarius LMG 21996 0 0 3 0 2 106 0 43835 43946 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus lactolyticus;t__Anaerococcus lactolyticus ATCC 51172 20 664 6 0 798 215 0 41299 43002 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio hydrothermalis;t__Desulfovibrio hydrothermalis AM13 = DSM 14728 0 2 0 1 0 94 0 73959 74056 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC2031;t__ 0 1 0 5 6 37 0 63780 63829 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium oral taxon 876;t__Clostridiales bacterium oral taxon 876 str. F0540 0 0 0 7 0 0 0 95115 95122 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__secondary endosymbiont of Ctenarytaina eucalypti;t__ 0 0 2 4 3 0 0 28813 28822 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella pealeana;t__Shewanella pealeana ATCC 700345 0 0 115 29 0 58 0 103284 103491 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus lactaris;t__Ruminococcus lactaris ATCC 29176 0 24 0 385 0 9 0 54059 54477 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__;f__;g__Nitratiruptor;s__Nitratiruptor sp. SB155-2;t__ 0 0 9 0 0 0 0 37549 37558 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter muridarum;t__ 0 0 0 2 0 55 0 46493 46550 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter;s__Maribacter sp. HTCC2170;t__ 0 2 0 0 14 33 0 77317 77366 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio proteoclasticus;t__Butyrivibrio proteoclasticus B316 0 0 0 0 0 0 0 10874 10952 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thermotolerans;t__ 0 25 7 89 43 181 0 75538 75883 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Sporomusa;s__Sporomusa ovata;t__Sporomusa ovata DSM 2662 0 299 26 11 30 0 0 107294 107660 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Chaetoceros salsugineum DNA virus;t__ 0 0 0 0 0 0 0 119 119 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Sulfurihydrogenibium;s__Sulfurihydrogenibium azorense;t__Sulfurihydrogenibium azorense Az-Fu1 1 0 0 0 5 0 0 32811 32817 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Finegoldia;s__Finegoldia magna;t__Finegoldia magna ATCC 29328 1 47 4 0 443 0 0 35456 35951 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Thermoanaerobacterium;s__Thermoanaerobacterium thermosaccharolyticum;t__Thermoanaerobacterium thermosaccharolyticum DSM 571 60 35 1 0 0 211 0 55408 55715 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter volucris;t__Campylobacter volucris LMG 24379 0 0 0 0 6 19 0 30333 30358 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma buteonis;t__ 0 0 0 0 0 13 0 16965 16978 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma laidlawii;t__Acholeplasma laidlawii PG-8A 23 0 0 0 0 3 0 29913 29939 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus cecorum;t__ 43 52 5 411 1 114 0 45059 45685 k__Bacteria;p__Firmicutes;c__Clostridia;o__;f__;g__;s__Clostridia bacterium UC5.1-1D1;t__ 5 518 590 0 0 0 0 60997 62110 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Roseolovirus;s__Human betaherpesvirus 7;t__ 0 0 0 0 0 0 0 3061 3061 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfuricurvum;s__Sulfuricurvum kujiense;t__Sulfuricurvum kujiense DSM 16994 0 0 7 7 9 0 0 51473 51496 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas syringae;t__Pseudomonas syringae pv. syringae 4 6 80 0 0 1068 0 120715 121873 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanotorris;s__Methanotorris igneus;t__Methanotorris igneus Kol 5 0 0 0 0 34 47 0 37002 37083 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Anabaena;s__Anabaena sp. 90;t__ 0 0 8 182 30 51 0 102711 102982 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Anaerotruncus;s__Anaerotruncus colihominis;t__Anaerotruncus colihominis DSM 17241 18 26 0 1089 115 36 0 73029 74313 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira;s__Nitrospira defluvii;t__ 5 0 0 0 0 0 0 86336 86341 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus satsumensis;t__Lactobacillus satsumensis DSM 16230 = JCM 12392 0 0 2 6 2 221 0 52247 52478 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pagevirus;s__Bacillus virus Page;t__Bacillus phage Page 0 0 0 0 0 302 0 495 797 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma granularum;t__Acholeplasma granularum ATCC 19168 0 0 0 0 0 120 0 28926 29046 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter gyllenbergii;t__Acinetobacter gyllenbergii NIPH 230 20 1 3 0 12 967 0 87276 88279 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia chinhatensis;t__ 7 0 1 5 2 37 0 69718 69770 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Facklamia;s__Facklamia hominis;t__Facklamia hominis CCUG 36813 7 366 31 54 8 0 0 37291 37757 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Brochothrix;s__Brochothrix thermosphacta;t__Brochothrix thermosphacta DSM 20171 = FSL F6-1036 0 0 2 0 3 0 0 49953 49962 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Mitsuokella;s__Mitsuokella multacida;t__Mitsuokella multacida DSM 20544 4 35 1 0 7 1 0 51387 51435 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia sp. Leaf139;t__ 0 0 3 3 1 78 0 107611 107696 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoclostridium;s__Peptoclostridium acidaminophilum;t__Peptoclostridium acidaminophilum DSM 3953 0 0 0 0 0 0 0 15532 16175 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter cetorum;t__Helicobacter cetorum MIT 00-7128 0 0 0 9 0 56 0 38887 38952 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Lentibacillus;s__Lentibacillus jeotgali;t__ 0 0 0 2 84 0 0 75374 75460 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus rapi;t__Lactobacillus rapi DSM 19907 = JCM 15042 0 0 2 3 2 181 0 56718 56906 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus farciminis;t__Lactobacillus farciminis KCTC 3681 = DSM 20184 0 0 2 0 0 108 0 49237 49347 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herminiimonas;s__Herminiimonas arsenicoxydans;t__ 0 22 8 34 446 0 0 67976 68486 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Basfia;s__[Mannheimia] succiniciproducens;t__Mannheimia succiniciproducens MBEL55E 0 0 37 0 56 0 0 46188 46281 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas artemidis;t__Selenomonas artemidis DSM 19719 0 0 0 0 31 188 0 46725 46944 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio sp. X2;t__ 0 7 1 1 0 3 0 78111 78123 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage 1-A4;t__ 0 0 0 0 0 31 0 559 590 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Neosynechococcus;s__Neosynechococcus sphagnicola;t__Neosynechococcus sphagnicola sy1 1 0 7 2 0 0 0 86399 86409 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLNTR3;t__ 0 0 0 0 0 422 0 138 560 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera elsdenii;t__Megasphaera elsdenii DSM 20460 0 11 14 0 8 134 0 49108 49275 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus malefermentans;t__Lactobacillus malefermentans DSM 5705 = KCTC 3548 0 0 2 51 61 542 0 40151 40811 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Alloprevotella;s__Alloprevotella tannerae;t__Alloprevotella tannerae ATCC 51259 0 1 0 71 104 0 0 51423 51599 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus gasseri;t__Lactobacillus gasseri ATCC 33323 = JCM 1131 6 1 9 2 2 112 0 36722 37887 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] hylemonae;t__[Clostridium] hylemonae DSM 15053 0 0 0 0 19 0 0 77380 77399 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Salinivibrio;s__Salinivibrio costicola;t__Salinivibrio costicola subsp. costicola 0 0 16 0 20 0 0 67182 67218 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus coahuilensis;t__Bacillus coahuilensis m4-4 48 0 2 10 30 55 0 67180 67332 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus faecis;t__Ruminococcus faecis JCM 15917 13 107 0 2328 4 62 0 62590 65104 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Oenococcus;s__Oenococcus oeni;t__Oenococcus oeni PSU-1 0 0 2 287 2 0 0 35315 35610 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus amyloliquefaciens;t__Bacillus amyloliquefaciens DSM 7 51 0 21 26 76 621 0 78808 79603 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus florum;t__Lactobacillus florum DSM 22689 = JCM 16035 0 0 0 0 0 19 0 26858 26877 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia paraffinivorans;t__Gordonia paraffinivorans NBRC 108238 0 0 18 19 0 219 0 92181 92440 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter;s__Thermoanaerobacter italicus;t__Thermoanaerobacter italicus Ab9 0 3 0 9 0 0 0 49009 49021 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Acetivibrio;s__Acetivibrio ethanolgignens;t__ 22 54 6 551 255 0 0 71768 72656 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio fischeri;t__Vibrio fischeri ES114 0 0 31 0 384 213 0 83927 84555 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus xylanexedens;t__ 2 0 0 42 3 531 0 140494 141072 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus faecium;t__Enterococcus faecium DO 0 0 1 0 0 267 0 5117 7085 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Carnimonas;s__Carnimonas nigrificans;t__Carnimonas nigrificans ATCC BAA-78 0 0 67 2 2 0 0 54418 54490 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Pyramidobacter;s__Pyramidobacter piscolens;t__Pyramidobacter piscolens W5455 121 0 0 0 0 0 0 50852 50974 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chitiniphilus;s__Chitiniphilus shinanonensis;t__Chitiniphilus shinanonensis DSM 23277 0 1 10 0 8 0 0 82863 82882 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax pacificus;t__Alcanivorax pacificus W11-5 0 79 455 9 0 22 0 82803 83368 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Anatid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 3161 3161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus S253;t__Staphylococcus phage S25-3 0 0 0 0 0 872 0 1922 2794 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sep1virus;s__Staphylococcus virus IPLAC1C;t__Staphylococcus phage phiIPLA-C1C 0 0 0 8 13 0 0 2798 2819 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Gemmataceae;g__Zavarzinella;s__Zavarzinella formosa;t__Zavarzinella formosa DSM 19928 0 0 0 0 0 0 0 195999 195999 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus koreensis;t__ 0 0 3 3 4 22 0 91962 91994 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus obesi;t__Peptoniphilus obesi ph1 2 323 0 0 547 584 0 33433 34889 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Candidatus Soleaferrea;s__Candidatus Soleaferrea massiliensis;t__Candidatus Soleaferrea massiliensis AP7 0 2 0 10 5 0 0 61859 61876 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Calditerrivibrio;s__Calditerrivibrio nitroreducens;t__Calditerrivibrio nitroreducens DSM 19672 0 0 0 0 0 0 0 43156 43156 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Richelia;s__Richelia intracellularis;t__Richelia intracellularis HH01 3 0 7 3 1 0 0 64691 64705 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Brenneria;s__Brenneria goodwinii;t__ 0 0 12 0 0 0 0 106989 107001 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus prevotii;t__Anaerococcus prevotii ACS-065-V-Col13 2 194 0 0 110 264 29 33279 33878 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paralimentarius;t__Lactobacillus paralimentarius DSM 13961 = JCM 10707 0 1 2 4 3 275 0 54577 54862 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas metalli;t__Arenimonas metalli CF5-1 51 1 3 4 40 87 0 60826 61012 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter capsici;t__ 2 1 2 1 48 166 0 127617 127837 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Parvibaculum;s__Parvibaculum lavamentivorans;t__Parvibaculum lavamentivorans DS-1 0 232 1 81 0 0 0 77980 78294 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus acidoterrestris;t__Alicyclobacillus acidoterrestris ATCC 49025 0 1 0 2 0 14 0 80868 80885 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus atrophaeus;t__Bacillus atrophaeus subsp. globigii 32 0 15 40 65 514 0 82818 83490 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio salmonicida;t__Aliivibrio salmonicida LFI1238 0 0 0 0 0 0 0 2358 2474 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Caldisalinibacter;s__Caldisalinibacter kiritimatiensis;t__ 0 1 0 1 6 0 0 55203 55211 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Nodosilinea;s__Nodosilinea nodulosa;t__Nodosilinea nodulosa PCC 7104 0 0 1 3 1 0 0 137585 137590 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium radiotolerans;t__Methylobacterium radiotolerans JCM 2831 0 1 0 14 2 17 0 121522 121556 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas gardneri;t__ 0 0 2 0 19 194 0 106047 106262 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Hylemonella;s__Hylemonella gracilis;t__Hylemonella gracilis ATCC 19624 0 0 0 11 44 0 0 72098 72153 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus massiliogorillae;t__ 0 0 3 5 5 30 0 108466 108509 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus F;t__ 0 0 0 0 0 0 0 684 684 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. KNHs209;t__ 4 3 0 35 0 13 0 93463 93518 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomassiliicoccaceae;g__Candidatus Methanoplasma;s__Candidatus Methanoplasma termitum;t__ 0 0 0 0 1 0 0 29772 29773 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 27;t__ 0 0 0 0 0 0 0 74 74 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Jonquetella;s__Jonquetella anthropi;t__Jonquetella anthropi DSM 22815 49 0 0 0 1 0 0 33457 33507 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ginsenosidimutans;t__ 0 2 5 3 2 407 0 51392 51811 k__Viruses;p__dsDNA viruses, no RNA stage;c__Mimiviridae;o__;f__;g__;s__Mimivirus terra2;t__ 0 0 0 0 10203 6 0 13103 23312 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Photorhabdus;s__Photorhabdus temperata;t__Photorhabdus temperata subsp. thracensis 0 0 21 115 43 0 0 102762 102941 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Thermobrachium;s__Thermobrachium celere;t__Thermobrachium celere DSM 8682 0 3 0 0 69 0 0 48538 48610 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella montpellierensis;t__Veillonella montpellierensis DSM 17217 5 4 0 0 2 1 0 37310 37322 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma opalescens;t__Mycoplasma opalescens ATCC 27921 0 0 0 0 0 22 0 15484 15506 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Frangipani mosaic virus;t__ 0 0 0 0 0 0 0 132 132 k__Bacteria;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium necrophorum;t__Fusobacterium necrophorum subsp. funduliforme 3 0 0 0 1 7 0 42121 42132 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus litoralis;t__Thermococcus litoralis DSM 5473 0 0 0 0 214 102 0 43977 44293 k__Bacteria;p__Dictyoglomi;c__Dictyoglomia;o__Dictyoglomales;f__Dictyoglomaceae;g__Dictyoglomus;s__Dictyoglomus turgidum;t__Dictyoglomus turgidum DSM 6724 0 0 0 0 0 0 0 37111 37111 k__Bacteria;p__Aquificae;c__Aquificae;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Desulfurobacterium;s__Desulfurobacterium sp. TC5-1;t__ 0 0 0 0 2 11 0 33054 33067 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. TCA20;t__ 0 0 0 21 0 498 0 112049 112568 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio tubiashii;t__Vibrio tubiashii ATCC 19109 1 0 25 0 30 1848 0 99315 101219 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus aureus;t__ 9 8 14 14 0 560 18086 34786 54195 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Halocynthiibacter;s__Halocynthiibacter arcticus;t__ 0 0 1 0 36 0 0 86554 86591 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Ferrovales;f__Ferrovaceae;g__Ferrovum;s__Ferrovum sp. JA12;t__ 0 0 0 0 0 0 0 39911 39911 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter rodentium;t__Helicobacter rodentium ATCC 700285 0 0 0 4 1 29 0 36127 36161 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium YSB2008;t__ 0 0 0 1 4 90 0 53575 53670 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus dysgalactiae;t__Streptococcus dysgalactiae subsp. equisimilis 3 24 0 14 0 368 0 43179 43588 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter aerophilus;t__Hymenobacter aerophilus DSM 13606 0 2 0 0 0 1 0 84922 84925 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 5;t__ 0 0 0 0 0 0 0 228 228 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chromobacterium;s__Chromobacterium violaceum;t__Chromobacterium violaceum ATCC 12472 0 6 25 13 108 175 0 94694 95021 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelatoclostridium;s__Erysipelatoclostridium ramosum;t__Erysipelatoclostridium ramosum DSM 1402 6 80 0 0 0 53 0 64525 64668 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Hungatella;s__Hungatella hathewayi;t__Hungatella hathewayi WAL-18680 0 3 0 413 2 0 901 111491 112810 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium formicicum;t__Methanobacterium formicicum DSM 3637 0 0 0 0 4 0 0 53629 53633 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halanaerobiaceae;g__Halanaerobium;s__Halanaerobium saccharolyticum;t__Halanaerobium saccharolyticum subsp. saccharolyticum 0 0 0 0 0 62 0 57371 57433 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Fenollaria;s__Fenollaria massiliensis;t__ 7 1068 0 52 25 0 0 33021 34175 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Jeotgalibacillus;s__Jeotgalibacillus malaysiensis;t__ 2 0 23 161 30 0 0 70112 70328 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter indicus;t__Acinetobacter indicus CIP 110367 25 31 32 0 162 2711 0 61207 64168 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas mexicana;t__ 0 1 1 1 124 16 0 78495 78638 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium Q-1;t__ 47 0 6 0 0 0 0 61459 61512 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. P1XP2;t__ 0 0 0 5 61 104 0 116304 116474 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hilgardii;t__Lactobacillus hilgardii DSM 20176 = ATCC 8290 0 0 2 1 5 356 0 51593 51958 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus hyicus;t__ 5 6 1 18 2 283 0 49127 49442 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoanaerobaculum;s__Lachnoanaerobaculum sp. OBRC5-5;t__ 11 29 0 108 568 137 0 57056 57909 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Gracilibacillus;s__Gracilibacillus halophilus;t__Gracilibacillus halophilus YIM-C55.5 0 0 0 1 9 0 0 60476 60486 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter cloacae;t__Enterobacter cloacae subsp. cloacae 20 297 129 324 1466 98 0 103825 106291 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ceti;t__Lactobacillus ceti DSM 22408 0 0 0 0 0 0 0 27662 27662 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__;g__Candidatus Hepatobacter;s__Candidatus Hepatobacter penaei;t__ 0 10 1 0 0 0 0 22229 22240 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__Picrophilaceae;g__Picrophilus;s__Picrophilus torridus;t__Picrophilus torridus DSM 9790 0 0 0 0 0 0 0 30917 30917 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus provenciensis;t__ 0 105 0 0 266 207 0 44436 45014 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus claussenii;t__Pediococcus claussenii ATCC BAA-344 0 0 7 4 73 58 0 36440 36582 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria elongata;t__Neisseria elongata subsp. glycolytica 0 3 2 7 222 402 0 44496 45132 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O157:H7 1 16 26 148 333 0 23905 82450 109968 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Kandleria;s__Kandleria vitulina;t__Kandleria vitulina DSM 20405 0 16 0 0 0 0 0 42279 42295 k__Bacteria;p__Verrucomicrobia;c__Spartobacteria;o__Chthoniobacterales;f__Chthoniobacteraceae;g__Chthoniobacter;s__Chthoniobacter flavus;t__Chthoniobacter flavus Ellin428 0 1 0 0 0 0 0 156850 156851 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma primatum;t__Mycoplasma primatum ATCC 25948 1 0 0 0 0 36 0 17903 17940 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Catenibacterium;s__Catenibacterium mitsuokai;t__Catenibacterium mitsuokai DSM 15897 20 5 0 0 4 0 0 52497 52526 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoanaerobacter;s__[Eubacterium] yurii;t__[Eubacterium] yurii subsp. margaretiae 0 1 0 0 0 0 0 49241 49242 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Amoebophilaceae;g__Candidatus Cardinium;s__Cardinium endosymbiont of Encarsia pergandiella;t__Cardinium endosymbiont cEper1 of Encarsia pergandiella 0 0 0 0 0 0 0 17714 17733 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hordei;t__Lactobacillus hordei DSM 19519 0 0 6 9 4 404 0 45250 45678 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Oceanimonas;s__Oceanimonas smirnovii;t__Oceanimonas smirnovii ATCC BAA-899 0 0 8 0 1 0 0 65583 65592 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio genomosp. F10;t__Vibrio genomosp. F10 str. ZF-129 0 0 11 0 3 131 0 87914 88059 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus selangorensis;t__ 72 2 1 2 0 22 0 41580 41679 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alishewanella;s__Alishewanella agri;t__Alishewanella agri BL06 0 40 262 9 1 0 0 69466 69778 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus equicursoris;t__Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 1 0 4 3 0 325 0 40365 40698 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella bergensis;t__Prevotella bergensis DSM 17361 9 0 0 0 2 1088 0 62756 63855 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus oryziterrae;t__ 0 1 3 1 6 29 0 71428 71468 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus lindneri;t__ 0 0 0 2 10 116 0 28202 28332 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Candidatus Nitrosopumilus adriaticus;t__ 0 0 0 0 0 0 0 36061 36061 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanohalobium;s__Methanohalobium evestigatum;t__Methanohalobium evestigatum Z-7303 0 0 0 0 0 0 0 3206 3278 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides barnesiae;t__Bacteroides barnesiae DSM 18169 = JCM 13652 0 10 1 275 0 1004 0 70978 72268 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Granulicatella;s__Granulicatella elegans;t__Granulicatella elegans ATCC 700633 4 41 6 92 1 16 0 34640 34800 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio sp. MC2013;t__ 0 0 0 0 58 16 0 76085 76159 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum deleyianum;t__Sulfurospirillum deleyianum DSM 6946 0 0 3 1 9 168 0 45946 46127 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfarculales;f__Desulfarculaceae;g__Desulfarculus;s__Desulfarculus baarsii;t__Desulfarculus baarsii DSM 2075 69 0 128 0 4 0 0 72913 73114 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. ATCC 51142;t__ 0 0 0 0 0 0 0 1922 1922 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella benthica;t__Shewanella benthica KT99 0 0 31 17 0 268 0 86477 86793 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylovorus;s__Methylovorus glucosotrophus;t__Methylovorus glucosetrophus SIP3-4 0 0 6 2 38 0 0 59864 59910 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus iheyensis;t__Oceanobacillus iheyensis HTE831 0 0 13 4 166 82 0 72345 72610 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Megasphaera;s__Megasphaera sp. UPII 135-E;t__ 31 174 1 0 3 0 0 32711 32920 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium baratii;t__Clostridium baratii str. Sullivan 0 0 0 1 14 386 0 62664 63065 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__;s__marine gamma proteobacterium HTCC2080;t__ 0 2 5 2 0 8 0 71459 71476 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus dextrinicus;t__Lactobacillus dextrinicus DSM 20335 0 1 11 5 1 34 0 36038 36090 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Hoeflea;s__Hoeflea sp. IMCC20628;t__ 1 2 7 26 3 27 0 96780 96846 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter heilmannii;t__ 0 107 0 2 0 29 0 32222 32360 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus anginosus;t__Streptococcus anginosus C238 0 415 0 13 0 115 0 44129 44672 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiocystis;s__Thiocystis violascens;t__Thiocystis violascens DSM 198 0 0 22 2 14 0 0 100303 100341 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia;s__Shimia marina;t__ 105 5 0 0 1262 0 0 78443 79815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCD211;t__ 0 0 0 0 1 17 0 2608 2626 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Noviherbaspirillum;s__Noviherbaspirillum massiliense;t__Noviherbaspirillum massiliense JC206 0 0 5 10 21 0 0 83343 83379 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus arlettae;t__Staphylococcus arlettae CVD059 0 5 0 4 15 472 0 50712 51208 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium aurantiacum;t__ 0 0 0 33 0 35 0 57443 57511 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus virus Lb338-1;t__ 0 0 0 0 0 0 0 2842 2842 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia;s__Roseburia hominis;t__Roseburia hominis A2-183 9 68 0 1021 53 239 0 70452 71842 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Pasteurella;s__Pasteurella multocida;t__ 0 0 45 0 261 3 0 45127 45436 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Brachymonas;s__Brachymonas chironomi;t__Brachymonas chironomi DSM 19884 6 46 13 138 47 0 0 49711 49961 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Kosmotogales;f__Kosmotogaceae;g__Mesotoga;s__Mesotoga prima;t__Mesotoga prima MesG1.Ag.4.2 0 0 0 0 0 0 0 59484 59484 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus rossiae;t__Lactobacillus rossiae DSM 15814 0 0 0 1 2 184 0 56975 57162 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Rhodovibrio;s__Rhodovibrio salinarum;t__Rhodovibrio salinarum DSM 9154 0 0 1 2 0 0 0 83518 83521 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__;s__bacterium endosymbiont of Mortierella elongata FMR23-6;t__ 0 1 1 10 4 0 0 52868 52884 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio alkalitolerans;t__Desulfovibrio alkalitolerans DSM 16529 0 232 189 39 2 221 0 63303 63986 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Amphritea;s__Amphritea japonica;t__Amphritea japonica ATCC BAA-1530 0 0 8 3 5 0 0 75859 75875 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__Candidatus Azobacteroides;s__Candidatus Azobacteroides pseudotrichonymphae;t__Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 0 0 0 4 0 0 0 22280 22284 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Caldicoprobacteraceae;g__Caldicoprobacter;s__Caldicoprobacter oshimai;t__Caldicoprobacter oshimai DSM 21659 0 0 2 53 0 0 0 54436 54491 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Lampropedia;s__Lampropedia cohaerens;t__ 0 3 2 14 43 0 0 63043 63105 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium tetani;t__Clostridium tetani E88 5 0 0 0 6 42 0 55725 55985 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Gottschalkia;s__Gottschalkia acidurici;t__[Clostridium] acidurici 9a 0 7 0 4 1 16 0 62078 62106 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus callidus;t__Ruminococcus callidus ATCC 27760 0 1 0 110 0 1 0 60383 60495 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Riemerella;s__Riemerella anatipestifer;t__Riemerella anatipestifer ATCC 11845 = DSM 15868 0 1 0 0 77 15 0 42598 43281 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. S2151;t__ 0 1 137 0 32 165 0 103564 103899 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Eisenbergiella;s__Eisenbergiella tayi;t__ 0 0 0 11 0 0 0 141306 141317 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Phocea;s__Phocea massiliensis;t__ 0 0 0 14 1 0 0 50112 50127 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium gaetbulicola;t__Photobacterium gaetbulicola Gung47 0 0 75 0 128 362 0 117621 118186 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvularculales;f__Parvularculaceae;g__Parvularcula;s__Parvularcula bermudensis;t__Parvularcula bermudensis HTCC2503 0 0 0 0 0 22 0 58030 58052 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia vulneris;t__Escherichia vulneris NBRC 102420 0 3 5 40 114 9 0 87219 87390 k__Bacteria;p__Acidobacteria;c__Holophagae;o__Holophagales;f__Holophagaceae;g__Holophaga;s__Holophaga foetida;t__Holophaga foetida DSM 6591 0 0 0 0 0 0 0 82403 82403 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio tasmaniensis;t__Vibrio tasmaniensis LGP32 0 0 5 0 32 1803 0 97654 99494 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Thiomonas;s__Thiomonas bhubaneswarensis;t__ 51 3 1 75 1 56 0 63821 64008 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter bereziniae;t__Acinetobacter bereziniae LMG 1003 = CIP 70.12 27 264 133 35 50 681 0 97661 98851 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Nitrincola;s__Nitrincola nitratireducens;t__ 0 0 13 1 12 14 0 80386 80426 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Candidatus Thioglobus;s__Candidatus Thioglobus autotrophicus;t__ 0 0 0 0 0 0 0 30248 30248 k__Bacteria;p__Acidobacteria;c__Solibacteres;o__Solibacterales;f__Bryobacteraceae;g__Bryobacter;s__Bryobacter aggregatus;t__Bryobacter aggregatus MPL3 0 2 0 0 0 0 0 114952 114954 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thioflavicoccus;s__Thioflavicoccus mobilis;t__Thioflavicoccus mobilis 8321 0 1 13 1 0 0 0 80963 80978 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella hellenica;t__ 0 0 0 171 53 62 0 35982 36269 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas enteropelogenes;t__ 0 0 9 0 0 512 0 86032 86553 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus proteolyticus;t__Deinococcus proteolyticus MRP 0 0 0 0 0 18 0 42923 42941 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Kangiellaceae;g__Kangiella;s__Kangiella geojedonensis;t__ 0 0 16 0 0 0 0 49888 49904 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio crassostreae;t__ 0 0 2 0 0 100 0 109311 109413 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum autotrophicum;t__ 0 0 4 8 24 17 0 119955 120008 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__;s__marine gamma proteobacterium HTCC2148;t__ 0 1 13 6 1 43 0 85996 86060 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter sp. Ver3;t__ 3 0 0 0 73 400 0 66037 66514 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Pelomonas;s__Pelomonas sp. Root662;t__ 0 1 1 130 15 0 0 116060 116207 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Pontibacillus;s__Pontibacillus marinus;t__Pontibacillus marinus BH030004 = DSM 16465 0 0 0 0 0 0 0 85272 85272 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas jeotgali;t__Halomonas jeotgali Hwa 0 0 9 0 12 16 0 56858 56895 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caballeronia;s__Caballeronia glathei;t__ 0 0 11 3 84 0 0 171983 172081 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia sprentiae;t__Paraburkholderia sprentiae WSM5005 0 1 5 25 66 0 0 125965 126062 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Derxia;s__Derxia gummosa;t__Derxia gummosa DSM 723 0 1 7 7 1 0 0 103585 103601 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Leucothrix;s__Leucothrix mucor;t__Leucothrix mucor DSM 2157 0 0 25 3 3 0 0 103680 103711 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Dickeya;s__Dickeya solani;t__Dickeya solani IPO 2222 0 0 3 46 15 1 0 96924 96989 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas gardneri;t__ 0 0 0 0 0 3 0 5959 6243 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli UMN026 30 39 53 216 354 0 17597 85193 104041 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Aliagarivorans;s__Aliagarivorans marinus;t__Aliagarivorans marinus DSM 23064 0 0 7 3 0 0 0 97430 97440 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylosarcina;s__Methylosarcina lacus;t__Methylosarcina lacus LW14 0 1 21 0 31 14 0 87631 87698 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Sedimenticola;s__Sedimenticola thiotaurini;t__ 0 0 5 0 0 0 0 78573 78578 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Hafniaceae;g__Obesumbacterium;s__Obesumbacterium proteus;t__ 4 3 34 296 0 0 0 99867 100235 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herbaspirillum;s__Herbaspirillum rhizosphaerae;t__ 0 0 5 7 30 122 0 105052 105216 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Rathayibacter;s__Rathayibacter toxicus;t__ 1 0 1 1 24 0 0 46893 46920 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Synergistes;s__Synergistes jonesii;t__ 0 0 0 0 0 0 0 54712 54712 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga nitratireducenticrescens;t__ 1 2 21 0 0 34 0 62685 62743 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium valentinum;t__ 0 0 0 2 8 312 0 175376 175698 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter psychrophilus;t__ 0 0 10 0 0 0 0 79961 79971 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Marinimicrobium;s__Marinimicrobium agarilyticum;t__Marinimicrobium agarilyticum DSM 16975 0 1 24 15 11 92 0 89801 89944 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium gallicum;t__Rhizobium gallicum bv. gallicum 0 0 2 33 87 97 0 82445 82664 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Kyrpidia;s__Kyrpidia tusciae;t__Kyrpidia tusciae DSM 2912 0 2 0 4 7 0 0 67682 67695 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Rhodomicrobium;s__Rhodomicrobium vannielii;t__Rhodomicrobium vannielii ATCC 17100 0 0 0 9 0 0 0 80280 80289 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Hydrogenophilales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus thioparus;t__Thiobacillus thioparus DSM 505 0 0 7 0 0 40 0 63915 63962 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis excentricus;t__Asticcacaulis excentricus CB 48 0 0 4 0 19 0 0 78058 78081 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas alkylphenolica;t__ 0 118 17 12 0 931 0 114214 115292 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinobacterium;s__Marinobacterium rhizophilum;t__Marinobacterium rhizophilum DSM 18822 0 0 6 0 2 2 0 107076 107086 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia rubidaea;t__ 0 0 35 140 0 0 0 98281 98456 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium fabrum;t__Agrobacterium fabrum str. C58 0 0 1 10 103 239 0 97988 98341 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Cyanobium;s__Cyanobium gracile;t__Cyanobium gracile PCC 6307 0 0 3 31 37 8 0 66768 66847 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Rhodopirellula;s__Rhodopirellula islandica;t__ 0 0 0 0 0 0 0 148561 148561 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Pleomorphomonas;s__Pleomorphomonas koreensis;t__Pleomorphomonas koreensis DSM 23070 0 20 83 31 0 11 0 92115 92260 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter hydrocarbonoclasticus;t__Marinobacter hydrocarbonoclasticus ATCC 49840 0 0 20 0 0 88 0 79681 79789 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus mucilaginosus;t__Paenibacillus mucilaginosus 3016 0 7 6 18 35 314 0 174400 174780 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Pontibacillus;s__Pontibacillus chungwhensis;t__Pontibacillus chungwhensis BH030062 18 0 0 0 10 5 0 77349 77385 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes finegoldii;t__Alistipes finegoldii DSM 17242 0 3 0 901 0 1845 0 71935 74684 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Prochloraceae;g__Prochlorococcus;s__Prochlorococcus marinus;t__Prochlorococcus marinus subsp. marinus 0 0 0 0 0 0 0 35021 35021 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Hippea;s__Hippea alviniae;t__Hippea alviniae EP5-r 0 0 0 0 0 21 0 34961 34982 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__;s__Betaproteobacteria bacterium MOLA814;t__ 0 0 23 0 0 0 0 57121 57144 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia sp. Root123D2;t__ 0 0 3 12 1682 13 0 94257 95967 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Salegentibacter;s__Salegentibacter mishustinae;t__ 0 0 0 0 4 0 0 75446 75450 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Abiotrophia;s__Abiotrophia defectiva;t__Abiotrophia defectiva ATCC 49176 0 12 5 54 0 0 0 40730 40801 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Thermocrinis;s__Thermocrinis sp. GBS;t__ 0 0 0 0 5 20 0 26268 26293 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter apodemus;t__ 0 1 0 3 0 30 0 41099 41133 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Aquabacterium;s__Aquabacterium parvum;t__ 0 1 0 16 17 0 0 90656 90727 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp. AL212;t__ 0 0 4 0 1 6 0 63599 63610 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Rhodospirillum;s__Rhodospirillum rubrum;t__Rhodospirillum rubrum ATCC 11170 0 2 7 1 58 0 0 86988 87056 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter showae;t__Campylobacter showae CSUNSWCD 0 0 0 0 0 28 0 42431 42459 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Pseudoramibacter;s__Pseudoramibacter alactolyticus;t__Pseudoramibacter alactolyticus ATCC 23263 33 9 0 0 4 0 0 46360 46406 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Sporomusaceae;g__Thermosinus;s__Thermosinus carboxydivorans;t__Thermosinus carboxydivorans Nor1 0 6 5 9 5 0 0 57680 57705 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter valericigenes;t__Oscillibacter valericigenes Sjm18-20 0 0 0 11 0 108 0 88081 88200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Macropodid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2802 2802 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella loihica;t__Shewanella loihica PV-4 0 0 102 15 0 371 0 91563 92051 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylococcus;s__Methylococcus capsulatus;t__Methylococcus capsulatus str. Bath 0 0 9 0 10 0 0 66072 66091 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia niastensis;t__Massilia niastensis DSM 21313 0 0 3 5 1 103 0 131444 131556 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas hydrophila;t__Aeromonas hydrophila subsp. hydrophila 0 0 99 0 0 812 0 93977 94888 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Elstera;s__Elstera litoralis;t__ 0 1 4 4 0 0 0 74740 74749 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus nasuensis;t__Lactobacillus nasuensis JCM 17158 0 0 3 1 1 26 0 45454 45485 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Pseudorhodoferax;s__Pseudorhodoferax sp. Leaf274;t__ 0 0 1 10 60 35 0 134553 134659 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiorhodovibrio;s__Thiorhodovibrio sp. 970;t__ 0 1 5 2 10 0 0 106626 106644 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium icense;t__ 0 0 0 16 0 20 0 166419 166455 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio aespoeensis;t__Desulfovibrio aespoeensis Aspo-2 0 12 59 1 0 2 0 72508 72582 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aequorivita;s__Aequorivita sublithincola;t__Aequorivita sublithincola DSM 14238 1 0 2 0 31 37 0 70342 70413 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pluralibacter;s__Pluralibacter gergoviae;t__ 0 9 60 263 522 0 0 108937 109793 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium BAL199;t__ 0 1 4 0 0 0 0 121921 121926 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus;s__Terracidiphilus gabretensis;t__ 24 0 0 0 7 0 0 106834 106865 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xylella;s__Xylella fastidiosa;t__Xylella fastidiosa 9a5c 0 20 41 6 31 2 0 53486 53586 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Haemophilus;s__[Haemophilus] ducreyi;t__Haemophilus ducreyi 35000HP 0 0 34 0 18 0 0 33921 33979 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia sp. PBA;t__ 59 156 115 216 19 13 0 75917 76495 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas dokdonensis;t__ 0 0 0 0 20 0 0 70989 71009 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio sp. L21-Syr-AB;t__ 117 6 13 20 9 22 0 67623 67810 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Altererythrobacter;s__Altererythrobacter troitsensis;t__ 0 0 0 0 8 0 0 58022 58030 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum brasilense;t__ 0 0 0 0 0 0 0 71036 71628 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sediminispirochaeta;s__Sediminispirochaeta smaragdinae;t__Sediminispirochaeta smaragdinae DSM 11293 0 0 0 0 0 0 0 93079 93079 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium;s__Janthinobacterium sp. Marseille;t__ 0 38 6 12 63 0 0 82086 82205 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Ottowia;s__Ottowia thiooxydans;t__Ottowia thiooxydans DSM 14619 0 88 0 112 234 1 0 140289 140724 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio piezophilus;t__Desulfovibrio piezophilus C1TLV30 0 1 0 1 0 50 0 72827 72879 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Necropsobacter;s__Necropsobacter massiliensis;t__ 29 106 145 0 41 0 0 49434 49755 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus pantheris;t__Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106 0 0 2 0 0 19 0 50440 50461 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__;s__Geomicrobium sp. JCM 19038;t__ 0 1 1 5 0 14 0 77363 77384 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Wolbachia;s__Wolbachia endosymbiont of Glossina morsitans morsitans;t__ 0 0 0 0 0 4530 0 15341 19871 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus filiformis;t__ 14 0 0 0 2 276 0 47358 47650 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium oligotrophicum;t__Bradyrhizobium oligotrophicum S58 0 0 2 3 19 98 0 165161 165283 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter johnsonii;t__Acinetobacter johnsonii XBB1 20 7 11 1 42 1239 0 68875 70195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Plodia interpunctella granulovirus;t__ 0 0 0 0 0 0 0 2250 2250 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma mycoides;t__Mycoplasma mycoides subsp. mycoides 0 0 0 0 0 267 0 23967 24234 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage vB_BanS-Tsamsa;t__ 0 0 0 0 0 0 0 3377 3377 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus agilis;t__Lactobacillus agilis DSM 20509 30 5 4 1 3 44 0 40866 40953 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Archaeoglobus;s__Archaeoglobus sulfaticallidus;t__Archaeoglobus sulfaticallidus PM70-1 0 0 0 0 2 5 0 41531 41538 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus merionis;t__Streptococcus merionis DSM 19192 0 0 0 3 0 27 0 47049 47079 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Advenella;s__Advenella mimigardefordensis;t__Advenella mimigardefordensis DPN7 0 0 2 5 40 0 0 94763 94810 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Chroococcaceae;g__Gloeocapsa;s__Gloeocapsa sp. PCC 73106;t__ 0 0 3 0 1 0 0 80074 80078 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Succinivibrionaceae;g__;s__Succinivibrionaceae bacterium WG-1;t__ 0 0 3 0 5 0 0 51864 51872 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobium;s__Chlorobium chlorochromatii;t__Chlorobium chlorochromatii CaD3 0 0 0 0 0 11 0 51430 51441 k__Bacteria;p__Firmicutes;c__Clostridia;o__Halanaerobiales;f__Halanaerobiaceae;g__Halanaerobium;s__Halanaerobium hydrogeniformans;t__ 0 0 0 0 0 70 0 52192 52262 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Dialister;s__Dialister succinatiphilus;t__Dialister succinatiphilus YIT 11850 0 55 0 0 0 6 0 48911 48972 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio vulnificus;t__Vibrio vulnificus YJ016 0 0 47 0 27 358 0 103797 104229 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Asaia;s__Asaia astilbis;t__Asaia astilbis JCM 15831 0 0 0 0 2 89 0 62762 62853 k__Bacteria;p__Bacteroidetes;c__Sphingobacteriia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter glucosidilyticus;t__Pedobacter glucosidilyticus DSM 23534 0 2 0 0 7 10 0 80161 80180 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Sulfurihydrogenibium;s__Sulfurihydrogenibium subterraneum;t__Sulfurihydrogenibium subterraneum DSM 15120 1 0 0 2 2 34 0 32111 32150 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus oncorhynchi;t__ 0 0 0 1 10 0 0 92149 92160 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Verminephrobacter;s__Verminephrobacter eiseniae;t__Verminephrobacter eiseniae EF01-2 0 3 0 13 30 3 0 111285 111334 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus plantarum;t__Lactobacillus plantarum WCFS1 0 0 19 0 3 148 0 65994 66165 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter bohemicus;t__ 0 1 2 0 5 459 3932 69974 74373 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Schlesneria;s__Schlesneria paludicola;t__Schlesneria paludicola DSM 18645 0 0 0 0 0 0 0 172592 172592 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Clanis bilineata nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2709 2709 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kordiimonadales;f__Kordiimonadaceae;g__Kordiimonas;s__Kordiimonas gwangyangensis;t__Kordiimonas gwangyangensis DSM 19435 = JCM 12864 0 0 7 0 0 0 0 81612 81619 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter faecis;t__ 0 0 2 0 5 373 0 49456 49836 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia sacchari;t__ 12 2 2 7 16 11 0 145017 145067 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__Marseillevirus;s__Marseillevirus marseillevirus;t__ 0 0 0 0 0 0 0 7369 7369 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__;s__Bacteroidales bacterium CF;t__ 0 2 0 4 0 0 0 53138 53144 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geoalkalibacter;s__Geoalkalibacter subterraneus;t__ 0 0 0 0 0 0 0 4841 4842 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas gingivicanis;t__Porphyromonas gingivicanis JCM 15907 0 3 0 0 0 14 0 41002 41019 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter curvus;t__Campylobacter curvus 525.92 0 0 1 0 3 41 0 39380 39425 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Snodgrassella;s__Snodgrassella alvi;t__Snodgrassella alvi wkB2 28 1 4 21 72 0 0 50433 50559 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus acidophilus;t__Lactobacillus acidophilus NCFM 0 0 1 0 0 87 0 39783 39871 k__Bacteria;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Capnocytophaga;s__Capnocytophaga ochracea;t__Capnocytophaga ochracea DSM 7271 0 2 1 0 21 148 0 52086 52258 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Facklamia;s__Facklamia ignava;t__Facklamia ignava CCUG 37419 0 253 22 391 8 31 0 34096 34801 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanolacinia;s__Methanolacinia petrolearia;t__Methanolacinia petrolearia DSM 11571 0 0 0 0 0 0 0 56865 56865 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Janthinobacterium;s__Janthinobacterium sp. CG3;t__ 0 0 4 9 47 10 0 125086 125156 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Aquabacterium;s__Aquabacterium sp. NJ1;t__ 0 0 0 32 34 44 0 100278 100388 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus tucceti;t__Lactobacillus tucceti DSM 20183 0 0 2 1 2 140 0 43229 43374 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfomicrobiaceae;g__Desulfomicrobium;s__Desulfomicrobium escambiense;t__Desulfomicrobium escambiense DSM 10707 70 0 0 122 0 23 0 75299 75514 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanomicrobium;s__Methanomicrobium mobile;t__Methanomicrobium mobile BP 0 0 0 1 2 0 0 34213 34216 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Amoebophilaceae;g__Candidatus Amoebophilus;s__Candidatus Amoebophilus asiaticus;t__Candidatus Amoebophilus asiaticus 5a2 0 0 0 0 0 0 0 37687 37687 k__Bacteria;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Anabaena;s__Anabaena sp. PCC 7108;t__ 0 0 75 17 89 0 0 117514 117695 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylosinus;s__Methylosinus sp. LW4;t__ 0 2 2 17 53 39 0 96324 96437 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Pasteurella;s__Pasteurella bettyae;t__Pasteurella bettyae CCUG 2042 65 0 5 0 69 0 0 44839 44978 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus algorifonticola;t__ 0 0 0 4 0 16 0 149485 149505 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiocapsa;s__Thiocapsa marina;t__Thiocapsa marina 5811 0 1 5 4 16 0 0 111768 111794 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus ihumii;t__ 0 0 0 16 4 1357 0 117072 118449 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanolobus;s__Methanolobus tindarius;t__Methanolobus tindarius DSM 2278 0 0 0 0 21 20 0 62993 63035 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus B4;t__Bacillus phage B4 0 0 0 0 0 0 0 3251 3251 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Wolinella;s__Wolinella succinogenes;t__Wolinella succinogenes DSM 1740 0 0 0 9 18 0 0 42180 42207 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__Haliea;s__Haliea salexigens;t__Haliea salexigens DSM 19537 0 46 649 127 223 0 0 83963 85008 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__;s__Noumeavirus;t__ 0 0 0 0 0 0 0 7524 7524 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio putealis;t__Desulfovibrio putealis DSM 16056 0 0 0 0 0 4 0 93998 94002 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella tunisiensis;t__ 0 0 7 0 0 38 0 66789 66834 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Sulfolobus islandicus filamentous virus;t__ 0 0 0 0 0 0 0 817 817 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta alkalica;t__Spirochaeta alkalica DSM 8900 0 0 0 0 0 3 0 65923 65926 k__Bacteria;p__Acidobacteria;c__Blastocatellia;o__;f__;g__Pyrinomonas;s__Pyrinomonas methylaliphatogenes;t__ 0 0 0 0 0 0 0 75744 75744 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus acidilactici;t__ 0 0 12 5 87 0 0 42517 42627 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Lagierella;s__Lagierella massiliensis;t__ 0 23 7 0 51 0 0 36557 36639 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] citroniae;t__[Clostridium] citroniae WAL-17108 31 76 0 2003 189 70 0 129975 132344 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Anabaena;s__Anabaena cylindrica;t__Anabaena cylindrica PCC 7122 0 0 0 0 25 0 0 12813 13339 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio oxyclinae;t__Desulfovibrio oxyclinae DSM 11498 0 0 0 2 0 77 0 66336 66415 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Martelella;s__Martelella endophytica;t__ 0 0 1 37 2 0 0 96304 96344 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes troglodytes polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas maltophilia;t__Stenotrophomonas maltophilia K279a 0 0 3 0 63 229 0 96727 97022 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera cryocrescens;t__Kluyvera cryocrescens NBRC 102467 0 3 5 24 184 1 0 100447 100702 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb69virus;s__Shigella virus UTAM;t__Shigella phage Shf125875 0 0 0 0 271 609 0 2501 3381 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella waksmanii;t__Shewanella waksmanii ATCC BAA-643 0 0 0 0 0 34 0 99183 99217 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas adhaerens;t__Hyphomonas adhaerens MHS-3 0 0 1 0 0 43 0 73313 73357 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__;s__Erysipelotrichaceae bacterium NK3D112;t__ 1 0 0 0 9 0 0 62775 62785 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea vaviloviae;t__ 0 0 1 4 2 17 0 111836 111860 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Barnesiellaceae;g__Barnesiella;s__Barnesiella viscericola;t__Barnesiella viscericola DSM 18177 0 13 5 1438 9 0 0 60072 61537 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. BR10423;t__ 0 0 1 14 94 2 0 161545 161656 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia sp. JPY347;t__ 0 0 0 2 15 14 0 127582 127613 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter sp. SK209-2-6;t__ 0 0 2 0 163 6 0 90892 91063 k__Bacteria;p__Proteobacteria;c__Zetaproteobacteria;o__Mariprofundales;f__Mariprofundaceae;g__Mariprofundus;s__Mariprofundus ferrooxydans;t__Mariprofundus ferrooxydans PV-1 0 3 0 0 0 0 0 57277 57280 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobacter;s__Thalassobacter stenotrophicus;t__ 31 17 2 0 1893 0 0 69834 71778 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum alkaliphilum;t__Desulfotomaculum alkaliphilum DSM 12257 17 55 66 81 0 4 0 52063 52286 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Porticoccaceae;g__;s__Gammaproteobacteria bacterium MOLA455;t__ 0 0 6 4 1 0 0 52064 52075 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas aquatica;t__ 0 1 2 3 20 0 0 74317 74343 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. C100;t__ 41 38 1 4 421 1028 0 93591 95124 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus sp. X13SY08;t__ 0 1 0 2 0 39 0 30923 30965 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia cepacia;t__Burkholderia cepacia ATCC 25416 1 1 6 32 34 433 0 167412 167919 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;t__Salmonella enterica subsp. enterica 19 10 39 112 694 0 0 95160 96180 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter beijerinckii;t__Acinetobacter beijerinckii CIP 110307 8 4 5 2 89 1233 0 69773 71114 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Saccharibacter;s__Saccharibacter floricola;t__Saccharibacter floricola DSM 15669 31 44 1 0 7 4 0 47420 47507 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus flavefaciens;t__Ruminococcus flavefaciens FD-1 0 0 0 0 8 5 0 91185 91198 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus infernus;t__Methanocaldococcus infernus ME 0 0 0 0 0 0 0 26563 26563 k__Bacteria;p__Cyanobacteria;c__;o__Pleurocapsales;f__Xenococcaceae;g__Xenococcus;s__Xenococcus sp. PCC 7305;t__ 0 0 11 3 0 0 0 118149 118163 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Ponticaulis;s__Ponticaulis koreensis;t__Ponticaulis koreensis DSM 19734 0 0 1 2 2 0 0 67991 67996 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus damnosus;t__ 0 0 13 2 1612 57 0 43262 44946 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geopsychrobacter;s__Geopsychrobacter electrodiphilus;t__Geopsychrobacter electrodiphilus DSM 16401 0 2 3 7 0 0 0 84822 84834 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfatirhabdium;s__Desulfatirhabdium butyrativorans;t__Desulfatirhabdium butyrativorans DSM 18734 47 0 0 0 6 0 0 89305 89358 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium arsenijevicii;t__ 0 0 0 1 23 1 0 120803 120828 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Thiomonas;s__Thiomonas arsenitoxydans;t__ 0 3 1 5 1 118 0 74488 74616 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter antarcticus;t__ 0 0 0 0 0 0 0 77386 77386 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas oceanitis;t__Hyphomonas oceanitis SCH89 0 0 1 0 1 62 0 85176 85240 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena biceps;t__Pseudanabaena biceps PCC 7429 0 0 0 3 0 0 0 108662 108665 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Syntrophomonadaceae;g__Syntrophothermus;s__Syntrophothermus lipocalidus;t__Syntrophothermus lipocalidus DSM 12680 0 0 1 0 0 0 0 48110 48111 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC2028;t__ 0 0 0 7 19 63 0 55331 55420 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus caballi;t__Streptococcus caballi DSM 19004 1 71 0 3 0 444 0 41748 42267 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium;s__Methanobacterium veterum;t__ 0 0 0 0 1 5 0 67263 67269 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Basilea;s__Basilea psittacipulmonis;t__Basilea psittacipulmonis DSM 24701 0 1 9 4 33 0 0 39134 39181 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces gerencseriae;t__Actinomyces gerencseriae DSM 6844 0 0 2 0 1 47 0 68269 68319 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium deserti;t__Corynebacterium deserti GIMN1.010 0 0 4 12 0 0 0 59426 59442 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas rubra;t__ 0 0 51 2 0 467 0 116356 116876 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio desulfuricans;t__Desulfovibrio desulfuricans subsp. desulfuricans 0 0 1 0 0 13 0 67784 67798 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Cynomolgus cytomegalovirus;t__ 0 0 0 0 0 403 0 4078 4481 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Buttiauxella;s__Buttiauxella ferragutiae;t__Buttiauxella ferragutiae ATCC 51602 0 1 2 23 7 0 0 101540 101573 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanoculleus;s__Methanoculleus bourgensis;t__Methanoculleus bourgensis MS2 0 0 0 2 2 24 0 55767 55795 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__[Eubacterium] rectale;t__[Eubacterium rectale] ATCC 33656 0 114 0 281 744 23 0 67831 68993 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage jm3;t__ 0 0 0 0 47 0 0 526 573 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanothermococcus;s__Methanothermococcus okinawensis;t__Methanothermococcus okinawensis IH1 0 0 0 0 11 0 0 33239 33250 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus villosus;t__Methanocaldococcus villosus KIN24-T80 0 0 0 0 1 25 0 24959 24985 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter insulaenigrae;t__Campylobacter insulaenigrae NCTC 12927 0 0 0 0 6 169 0 29126 29301 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__;s__Anopheles minimus irodovirus;t__ 0 0 0 0 0 0 0 3260 3260 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinospirillum;s__Marinospirillum minutulum;t__Marinospirillum minutulum DSM 6287 0 0 36 3 1 255 0 56384 56679 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella parapertussis;t__Bordetella parapertussis Bpp5 0 102 15 71 57 480 0 97021 97747 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus yeei;t__Paracoccus yeei ATCC BAA-599 3 0 14 0 83 263 0 88022 88385 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella aurantiaca;t__Prevotella aurantiaca JCM 15754 0 2 0 5 7 1597 0 58152 59763 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__;s__beta proteobacterium L13;t__ 0 0 32 0 0 0 0 75184 75216 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma poulsonii;t__ 0 0 0 0 0 61 0 35355 35416 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus herbarum;t__ 0 0 1 48 5 175 0 57450 57679 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Marivirga;s__Marivirga tractuosa;t__Marivirga tractuosa DSM 4126 0 2 0 75 0 0 0 90154 90231 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Atopobacter;s__Atopobacter phocae;t__Atopobacter phocae ATCC BAA-285 0 0 0 1 0 0 0 33177 33178 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] josui;t__[Clostridium] josui JCM 17888 16 17 0 99 11 356 0 88892 89391 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Rahnella;s__Rahnella aquatilis;t__Rahnella aquatilis HX2 0 1 25 186 132 0 0 98899 99243 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__Cotia virus;t__Cotia virus SPAn232 0 0 0 0 0 0 0 3702 3702 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanolobus;s__Methanolobus psychrophilus;t__Methanolobus psychrophilus R15 0 0 0 0 16 0 0 61435 61455 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanococcus;s__Methanococcus voltae;t__Methanococcus voltae A3 0 0 0 0 1 20 0 38706 38727 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Gottschalkia;s__[Clostridium] purinilyticum;t__ 0 1 0 1 0 1 0 67806 67809 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas smyrnensis;t__Halomonas smyrnensis AAD6 0 0 6 0 6 15 0 71118 71145 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio bivalvicida;t__ 0 0 2 0 5 334 0 97920 98261 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Aminiphilus;s__Aminiphilus circumscriptus;t__Aminiphilus circumscriptus DSM 16581 0 0 0 0 10 0 0 64443 64453 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanococcoides;s__Methanococcoides methylutens;t__Methanococcoides methylutens MM1 0 0 0 0 13 62 96 47721 47892 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella magna;t__Veillonella magna DSM 19857 1 143 0 0 0 7 0 43835 43986 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus;s__Cloacibacillus evryensis;t__Cloacibacillus evryensis DSM 19522 0 0 0 0 19 0 0 69746 69765 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes indistinctus;t__Alistipes indistinctus YIT 12060 0 1 0 2 0 3 0 56983 56989 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus popilliae;t__Paenibacillus popilliae ATCC 14706 0 0 0 7 0 10 0 75566 75583 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Celeribacter;s__Celeribacter indicus;t__ 1 0 1 0 61 0 0 90519 90582 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium diphtheriae;t__ 0 0 13 19 0 212 0 49029 49273 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas flueggei;t__Selenomonas flueggei ATCC 43531 0 15 1 0 34 0 0 43044 43094 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas eutropha;t__Nitrosomonas eutropha C91 0 134 475 0 2 31 0 54990 55632 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Duck atadenovirus A;t__ 0 0 0 0 0 0 0 664 664 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Duck atadenovirus A;t__ 0 0 0 0 0 0 0 664 664 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylovulum;s__Methylovulum miyakonense;t__Methylovulum miyakonense HT12 0 3 12 0 22 0 0 93671 93708 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Orientia;s__Orientia chuto;t__Orientia chuto str. Fuller 0 0 0 0 0 23 0 21734 21757 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__Thermoplasmataceae;g__Thermoplasma;s__Thermoplasma volcanium;t__Thermoplasma volcanium GSS1 0 0 0 0 0 0 0 31696 31696 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium americanum;t__ 0 0 1 9 0 0 0 75284 75294 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga neapolitana;t__Thermotoga neapolitana DSM 4359 0 0 0 0 138 1340 0 36213 37691 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanomethylovorans;s__Methanomethylovorans hollandica;t__Methanomethylovorans hollandica DSM 15978 0 0 0 0 0 0 0 5692 5702 k__Viruses;p__Virus families not assigned to an order;c__Lavidaviridae;o__;f__;g__Sputnikvirus;s__Mimivirus-dependent virus Sputnik;t__Sputnik virophage 0 0 0 0 0 0 0 366 366 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma genitalium;t__Mycoplasma genitalium G37 0 0 0 0 0 2 0 11599 11601 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus oceanisediminis;t__Bacillus oceanisediminis 2691 0 0 0 0 0 0 0 7514 7737 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas maltophilia;t__ 0 0 1 1 12 105 348 92193 92660 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Providencia;s__Providencia sneebia;t__Providencia sneebia DSM 19967 3 0 5 29 4 231 0 70275 70548 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCD38-2;t__ 0 0 0 0 0 0 0 821 821 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Ehrlichia;s__Ehrlichia chaffeensis;t__Ehrlichia chaffeensis str. Arkansas 0 0 0 0 0 35 0 23489 23524 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Alcaligenes;s__Alcaligenes faecalis;t__ 24 49 6 19 23 0 0 84554 84675 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Vulgatibacteraceae;g__Vulgatibacter;s__Vulgatibacter incomptus;t__ 2 0 1 4 0 0 0 87004 87011 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas sp. ATCC 13867;t__ 2 32 48 3 1 358 0 113482 113926 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage DirtyBetty;t__ 0 0 0 0 927 807 0 1514 3248 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Sulfurospirillum;s__Sulfurospirillum multivorans;t__Sulfurospirillum multivorans DSM 12446 0 0 1 1 5 193 0 63314 63514 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum lacustre;t__Desulfonatronum lacustre DSM 10312 0 0 2 4 0 54 0 75149 75209 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Octadecabacter;s__Octadecabacter arcticus;t__Octadecabacter arcticus 238 0 0 0 1 33 38 0 103933 104005 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter swuensis;t__Hymenobacter swuensis DY53 0 2 0 0 9 6 0 98067 98084 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus licheniformis;t__Bacillus licheniformis DSM 13 = ATCC 14580 28 0 13 3 58 546 0 83803 84451 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris BisA53 0 0 0 16 39 0 26 110028 110109 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Dielma;s__Dielma fastidiosa;t__ 0 168 0 0 6 0 0 71065 71239 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylomonas;s__Methylomonas koyamae;t__Methylomonas koyamae JCM 16701 0 1 5 0 11 26 0 98318 98361 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus parafarraginis;t__Lactobacillus parafarraginis DSM 18390 = JCM 14109 0 0 1 4 0 22 0 61565 61592 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Isosphaeraceae;g__Isosphaera;s__Isosphaera pallida;t__Isosphaera pallida ATCC 43644 0 0 0 0 0 0 0 109459 109459 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Oceanicaulis;s__Oceanicaulis sp. HTCC2633;t__ 14 39 3 2 2 66 0 63210 63336 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter concisus;t__ 0 0 0 0 0 297 0 36503 36800 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] cellulosi;t__ 32 0 0 1 2 0 0 44556 44591 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Candidatus Paracaedibacteraceae;g__Candidatus Paracaedibacter;s__Candidatus Paracaedibacter acanthamoebae;t__ 0 1 0 0 90 45 0 49264 49400 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Palaeococcus;s__Palaeococcus pacificus;t__Palaeococcus pacificus DY20341 0 0 0 0 25 11 0 37151 37187 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanoregulaceae;g__Methanolinea;s__Methanolinea tarda;t__Methanolinea tarda NOBI-1 0 0 0 3 0 0 0 41054 41057 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Bacteriovoracaceae;g__Bacteriovorax;s__Bacteriovorax sp. DB6_IX;t__ 0 0 0 0 0 0 0 59078 59078 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas changbaiensis;t__Sphingomonas changbaiensis NBRC 104936 0 0 5 1 5 16 0 64218 64245 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planomicrobium;s__Planomicrobium glaciei;t__ 0 0 4 6 32 0 0 78241 78283 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Gemella;s__Gemella haemolysans;t__Gemella haemolysans ATCC 10379 0 16 24 38 0 66 0 38154 38298 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bc431virus;s__Bacillus virus JBP901;t__Bacillus phage JBP901 0 0 0 0 1 5 0 3183 3189 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio vulgaris;t__Desulfovibrio vulgaris str. 'Miyazaki F' 0 1 0 1 0 6 0 80798 80806 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium tetani;t__Clostridium tetani E88 0 0 0 0 0 0 0 1481 1481 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium MC2017;t__ 0 8 0 7 119 101 0 84704 84939 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Percavirus;s__Equid gammaherpesvirus 5;t__ 0 0 0 0 0 0 0 3647 3647 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Pseudobutyrivibrio;s__Pseudobutyrivibrio ruminis;t__ 0 0 0 3 14 0 1957 53215 55189 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio sp. NC3005;t__ 0 2 0 1 172 116 0 76929 77220 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methermicoccaceae;g__Methermicoccus;s__Methermicoccus shengliensis;t__Methermicoccus shengliensis DSM 18856 0 0 0 0 0 0 0 30191 30191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridovirus 22;t__ 0 0 0 0 0 0 0 3953 3953 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Tolumonas;s__Tolumonas auensis;t__Tolumonas auensis DSM 9187 1 243 61 0 37 0 0 69083 69425 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Allofrancisella;s__Allofrancisella guangzhouensis;t__ 0 0 2 0 190 0 0 32977 33169 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Cercopithecine alphaherpesvirus 9;t__ 0 0 0 0 0 0 0 2495 2495 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Oceanobacillus;s__Oceanobacillus jeddahense;t__ 0 0 8 3 83 265 0 107380 107739 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium baratii;t__Clostridium baratii str. Sullivan 0 0 0 0 0 0 0 3707 3707 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__;g__;s__gamma proteobacterium IMCC1989;t__ 0 0 6 0 0 0 0 59488 59494 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Brevidensovirus;s__Dipteran brevidensovirus 1;t__Aedes albopictus densovirus 0 0 0 0 0 0 0 82 82 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella sp. N;t__ 0 0 0 0 0 0 0 139721 139721 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas crevioricanis;t__ 0 26 1 210 0 49 0 41795 42081 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria booriae;t__ 0 1 4 9 0 89 0 68579 68682 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Betaentomopoxvirus;s__Choristoneura biennis entomopoxvirus;t__ 0 0 0 0 0 0 0 6153 6153 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Kinetoplastibacterium;s__Candidatus Kinetoplastibacterium galatii;t__Candidatus Kinetoplastibacterium galatii TCC219 0 0 31 0 0 31 0 16380 16442 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas sp. COT-239 OH1446;t__ 0 0 0 2 0 5 0 39157 39164 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__;g__;s__filamentous cyanobacterium ESFC-1;t__ 0 0 5 2 0 0 0 112430 112437 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__Ferroplasmaceae;g__Ferroplasma;s__Ferroplasma acidarmanus;t__Ferroplasma acidarmanus fer1 0 0 0 0 0 0 0 38699 38699 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Marinomonas phage P12026;t__ 0 0 0 0 0 0 0 635 635 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes putredinis;t__Alistipes putredinis DSM 17216 0 6 0 723 0 275 0 49960 50964 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Dolosigranulum;s__Dolosigranulum pigrum;t__Dolosigranulum pigrum ATCC 51524 5 32 65 37 2 0 0 36750 36892 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanococcus;s__Methanococcus aeolicus;t__Methanococcus aeolicus Nankai-3 0 0 0 0 0 0 0 31389 31389 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma bovis;t__Mycoplasma bovis PG45 0 0 0 0 0 101 0 19967 20068 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus prevotii;t__Anaerococcus prevotii DSM 20548 3 29 0 0 2 22 0 37605 37661 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas piscicida;t__Pseudoalteromonas piscicida ATCC 15057 0 0 0 0 0 42 0 105260 105302 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus suis;t__Streptococcus suis BM407 0 389 1 41 0 483 0 42010 42924 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus fructivorans;t__Lactobacillus fructivorans KCTC 3543 = DSM 20203 0 0 2 1 0 9 0 27392 27404 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum B 0 0 0 0 1 239 11 75755 76006 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Odoribacteraceae;g__Odoribacter;s__Odoribacter splanchnicus;t__Odoribacter splanchnicus DSM 20712 0 2 0 308 0 0 0 87535 87845 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia typographi;t__ 0 0 2 38 8 27 0 114661 114736 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas noxia;t__Selenomonas noxia ATCC 43541 0 12 0 0 39 101 0 40532 40684 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Parvimonas;s__Parvimonas micra;t__ 2 333 0 0 7 0 0 32198 32540 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga maritima;t__Thermotoga maritima MSB8 0 0 0 0 0 689 0 36525 37214 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc mesenteroides;t__Leuconostoc mesenteroides subsp. mesenteroides 0 0 0 0 8 101 0 474 747 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Geoglobus;s__Geoglobus acetivorans;t__ 0 0 0 0 7 0 0 37209 37216 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella mangrovi;t__ 0 0 9 3 0 19 0 84190 84221 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__;s__[Eubacterium] nodatum;t__Eubacterium nodatum ATCC 33099 2 306 0 124 0 0 0 36107 36539 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 1;t__ 0 0 0 0 0 0 0 161 161 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina salinarum;t__ 0 0 7 6 0 23 0 49540 49576 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus psittaci;t__Lactobacillus psittaci DSM 15354 0 0 0 0 0 354 0 30392 30746 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma palmae;t__Acholeplasma palmae J233 0 0 0 0 1 0 0 31083 31084 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium sibiricum;t__Exiguobacterium sibiricum 255-15 1 0 2 47 0 446 0 60186 60682 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Cohnella;s__Cohnella thermotolerans;t__Cohnella thermotolerans DSM 17683 0 0 0 45 11 46 0 100480 100582 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus nagelii;t__Lactobacillus nagelii DSM 13675 0 0 2 0 0 167 0 49697 49866 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Cyanophage MED4-117;t__ 0 0 0 0 0 0 0 776 776 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus sulfureus;t__Enterococcus sulfureus ATCC 49903 0 0 12 59 14 209 0 45726 46020 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus obesiensis;t__Anaerococcus obesiensis ph10 11 365 7 0 535 291 0 39044 40253 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Betaentomopoxvirus;s__Adoxophyes honmai entomopoxvirus;t__Adoxophyes honmai entomopoxvirus 'L' 0 0 0 0 0 0 0 4574 4574 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borreliella;s__Borreliella valaisiana;t__Borreliella valaisiana Tom4006 0 0 0 0 0 12 0 1596 1608 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma alligatoris;t__Mycoplasma alligatoris A21JP2 0 0 0 0 0 60 0 19340 19400 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium NC2008;t__ 0 0 0 1 58 20 0 54250 54329 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma parvum;t__Mycoplasma parvum str. Indiana 0 0 0 0 0 9 0 11278 11287 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei Wuhan insect virus 9;t__ 0 0 0 0 0 80 0 169 249 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella macacae;t__Moraxella macacae 0408225 3 3 6 0 19 41 0 41508 41583 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira;s__Brachyspira hyodysenteriae;t__Brachyspira hyodysenteriae ATCC 27164 1 0 0 0 0 0 0 60827 60828 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Neptunomonas;s__Neptunomonas japonica;t__Neptunomonas japonica DSM 18939 0 1 3 0 0 0 0 87730 87734 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus simulans;t__ 9 5 3 19 0 136 0 52771 52951 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Centapoxvirus;s__Yokapox virus;t__ 0 0 0 0 0 0 0 3513 3513 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio crossotus;t__Butyrivibrio crossotus DSM 2876 0 28 0 1058 238 0 0 48237 49561 k__Bacteria;p__Dictyoglomi;c__Dictyoglomia;o__Dictyoglomales;f__Dictyoglomaceae;g__Dictyoglomus;s__Dictyoglomus thermophilum;t__Dictyoglomus thermophilum H-6-12 0 0 0 0 0 83 0 39116 39199 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio fibrisolvens;t__Butyrivibrio fibrisolvens FE2007 0 9 0 4 151 140 0 85874 86178 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylocella;s__Methylocella silvestris;t__Methylocella silvestris BL2 0 0 0 20 26 0 0 86062 86108 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas;s__Blastomonas sp. RAC04;t__ 0 0 2 21 25 0 0 79604 79652 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma penetrans;t__Mycoplasma penetrans HF-2 0 0 0 0 0 0 0 27172 27172 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfitobacterium;s__Desulfitobacterium metallireducens;t__Desulfitobacterium metallireducens DSM 15288 0 4 0 0 80 39 0 63398 63521 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Melissococcus;s__Melissococcus plutonius;t__Melissococcus plutonius ATCC 35311 0 0 0 0 0 0 0 3547 3552 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia prowazekii;t__Rickettsia prowazekii str. Madrid E 0 1 0 0 0 39 0 22190 22230 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Haladaptatus;s__Haladaptatus cibarius;t__Haladaptatus cibarius D43 0 0 5 0 3 6 0 78498 78512 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Gilvimarinus;s__Gilvimarinus polysaccharolyticus;t__ 0 0 0 2 0 0 0 74717 74719 k__Archaea;p__Thaumarchaeota;c__;o__Nitrosopumilales;f__Nitrosopumilaceae;g__Nitrosopumilus;s__Nitrosopumilus sp. SJ;t__ 0 0 2 0 18 32378 0 593 32991 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira crunogena;t__Thiomicrospira crunogena XCL-2 0 0 14 0 13 0 0 48527 48554 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma equifetale;t__Acholeplasma equifetale ATCC 29724 53 0 0 0 0 0 0 25549 25602 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Erinnyis ello granulovirus;t__ 0 0 0 0 0 0 0 2055 2055 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus ethanolidurans;t__ 0 0 3 4 237 490 0 44363 45097 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hokkaidonensis;t__Lactobacillus hokkaidonensis JCM 18461 0 0 78 7 3 529 0 44942 45559 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__Syntrophobacter;s__Syntrophobacter fumaroxidans;t__Syntrophobacter fumaroxidans MPOB 0 0 6 0 0 0 0 99799 99805 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria grayi;t__Listeria grayi DSM 20601 0 0 9 0 0 0 0 1303 1361 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Candidatus Baumannia cicadellinicola;t__Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 0 0 4 0 0 0 0 13719 13723 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira broomii;t__Leptospira broomii serovar Hurstbridge 0 0 0 0 0 48 0 87850 87898 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Conchiformibius;s__Conchiformibius steedae;t__Conchiformibius steedae DSM 2580 0 63 0 0 29 0 0 42779 42871 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Pseudobutyrivibrio;s__Pseudobutyrivibrio ruminis;t__Pseudobutyrivibrio ruminis HUN009 0 0 0 2 75 0 0 56010 56087 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Kurthia;s__Kurthia massiliensis;t__ 1 6 4 11 8 43 0 63744 63817 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium galatheae;t__ 0 0 5 0 18 51 0 90438 90512 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Romboutsia;s__[Clostridium] dakarense;t__ 0 1 0 3 29 0 0 74187 74220 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__Lachnoclostridium phytofermentans;t__Lachnoclostridium phytofermentans ISDg 0 4 0 16 54 6 0 96871 96951 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanococcoides;s__Methanococcoides methylutens;t__ 0 0 0 0 2 20 0 50121 50143 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Dorea;s__Dorea formicigenerans;t__Dorea formicigenerans ATCC 27755 14 325 0 487 2498 0 0 60368 63692 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Monkeypox virus;t__Monkeypox virus Zaire-96-I-16 0 0 0 0 0 280 0 3657 3937 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus flavefaciens;t__Ruminococcus flavefaciens MC2020 0 0 0 0 1 1 25 62392 62419 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc carnosum;t__Leuconostoc carnosum JB16 0 0 8 12 30 181 0 32670 32901 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus pseudintermedius;t__Staphylococcus pseudintermedius HKU10-03 5 323 31 17 3 367 0 51557 52347 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage MM1;t__ 0 0 0 0 0 0 0 804 804 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus bathoardescens;t__ 0 0 0 0 6 151 0 31994 32151 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Kosmotogales;f__Kosmotogaceae;g__Kosmotoga;s__Kosmotoga pacifica;t__ 0 0 1 0 0 9 0 43373 43383 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter parvus;t__Acinetobacter parvus DSM 16617 = CIP 108168 26 2 7 0 74 1593 0 55575 57277 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__Pteropox virus;t__ 0 0 0 0 0 0 0 2669 2669 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__;s__[Eubacterium] saphenum;t__Eubacterium saphenum ATCC 49989 0 7 0 1 0 0 0 21675 21683 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanothermaceae;g__Methanothermus;s__Methanothermus fervidus;t__Methanothermus fervidus DSM 2088 0 0 0 0 0 0 0 24866 24866 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus indolicus;t__Peptoniphilus indolicus ATCC 29427 12 155 0 0 37 36 0 41218 41460 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira sp. Milos-T2;t__ 0 2 16 0 14 63 0 52847 52942 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter sp. ENNN9_III;t__ 0 1 1 0 0 0 0 59382 59384 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. PAMC 25486;t__ 19 0 19 16 145 36 0 91636 91871 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StB20;t__ 0 0 0 0 4 0 0 813 818 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Proteus;s__Proteus mirabilis;t__Proteus mirabilis HI4320 0 0 0 0 0 0 0 725 725 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Hahellaceae;g__Hahella;s__Hahella ganghwensis;t__Hahella ganghwensis DSM 17046 0 0 8 2 0 4 0 131021 131035 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Verrucosispora;s__Verrucosispora maris;t__Verrucosispora maris AB-18-032 0 0 16 0 73 0 0 133390 133479 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polydnaviridae;o__;f__;g__Bracovirus;s__Microplitis demolitor bracovirus;t__ 0 0 0 0 0 0 0 3678 3678 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__Fervidobacterium;s__Fervidobacterium nodosum;t__Fervidobacterium nodosum Rt17-B1 79 0 0 0 0 0 0 38899 38978 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Archaeoglobus;s__Archaeoglobus fulgidus;t__Archaeoglobus fulgidus DSM 4304 0 0 0 0 0 0 0 43567 43567 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Entomoplasmataceae;g__Entomoplasma;s__Entomoplasma melaleucae;t__Entomoplasma melaleucae ATCC 49191 0 0 0 0 35 0 0 16410 16445 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus silvanus;t__Meiothermus silvanus DSM 9946 8 0 0 0 11 1018 0 63950 64987 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma putrefaciens;t__Mycoplasma putrefaciens KS1 0 0 4 0 0 63 0 16585 16652 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Ferrovales;f__Ferrovaceae;g__Ferrovum;s__Ferrovum myxofaciens;t__ 0 0 16 0 0 12 0 52807 52835 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Wphvirus;s__Bacillus virus Hakuna;t__Bacillus phage Hakuna 0 0 0 0 1731 272 0 1158 3161 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanohalobium;s__Methanohalobium evestigatum;t__Methanohalobium evestigatum Z-7303 0 0 0 0 5 0 0 44841 44846 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prymnesiovirus;s__Phaeocystis globosa virus;t__ 0 0 0 0 0 0 0 9199 9199 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Dorea;s__Dorea sp. 5-2;t__ 16 42 2 725 2372 12 0 114131 117300 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma wenyonii;t__Mycoplasma wenyonii str. Massachusetts 0 0 0 0 0 13 0 12991 13004 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter cloacae;t__Enterobacter cloacae subsp. cloacae 0 1 0 0 0 0 0 4628 5682 k__Bacteria;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7425;t__ 0 0 16 3 0 1 0 107471 107491 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax caeni;t__ 0 38 146 283 105 44 0 82922 83538 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter sp. P11F6;t__ 0 2 4 2 15 473 0 68842 69338 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__;s__Sphingomonas-like bacterium B12;t__ 370 3 2 2 46 0 0 95453 95876 k__Archaea;p__Euryarchaeota;c__;o__;f__;g__Aciduliprofundum;s__Aciduliprofundum sp. MAR08-339;t__ 0 0 0 0 0 17 0 28724 28741 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Syntrophomonadaceae;g__Syntrophomonas;s__Syntrophomonas wolfei;t__Syntrophomonas wolfei subsp. wolfei 0 0 1 0 0 0 0 58722 58723 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Levyella;s__Levyella massiliensis;t__ 209 484 0 0 1 0 0 33503 34197 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. AGR2160;t__ 0 0 0 0 0 11 0 58046 58057 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus aureus;t__Staphylococcus aureus subsp. aureus 24 12 1 14 0 232 0 55236 56427 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfovermiculus;s__Desulfovermiculus halophilus;t__Desulfovermiculus halophilus DSM 18834 4 0 68 157 1 0 0 64467 64697 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Cellvibrio;s__Cellvibrio japonicus;t__Cellvibrio japonicus Ueda107 0 0 18 9 11 4 0 91489 91531 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia fonticola;t__ 0 1 31 109 0 136 0 121733 122010 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio orientalis;t__Vibrio orientalis CIP 102891 = ATCC 33934 0 0 20 0 6 376 0 93554 93956 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Heliobacteriaceae;g__Heliobacterium;s__Heliobacterium modesticaldum;t__Heliobacterium modesticaldum Ice1 4 13 11 7 0 0 0 61473 61508 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas atlantica;t__Pseudoalteromonas atlantica T6c 0 0 37 6 0 9 0 103688 103740 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus intestinalis;t__Lactobacillus intestinalis DSM 6629 3 0 1 0 0 93 0 39941 40038 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. IS2118;t__ 66 0 0 1 17 47 0 104754 104885 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Catopsilia pomona nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2561 2561 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas paucimobilis;t__Sphingomonas paucimobilis NBRC 13935 0 0 4 0 217 570 0 85602 86393 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Chlorovirus;s__Paramecium bursaria Chlorella virus 1;t__ 0 0 0 0 0 0 0 6612 6612 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma bovigenitalium;t__Mycoplasma bovigenitalium 51080 0 0 0 0 0 8 0 17163 17171 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Acaryochloridaceae;g__Acaryochloris;s__Acaryochloris marina;t__Acaryochloris marina MBIC11017 0 0 0 0 0 0 0 36055 37143 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__gamma proteobacterium HIMB30;t__ 0 4 57 0 0 0 0 43252 43313 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas polymorpha;t__Hyphomonas polymorpha PS728 0 0 2 0 0 61 0 80823 80886 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Kingella;s__Kingella denitrificans;t__Kingella denitrificans ATCC 33394 74 0 2 3 84 18 0 43439 43627 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__;s__Tissierellia bacterium S7-1-4;t__ 4 79 912 0 0 11 0 35658 36664 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Batrachovirus;s__Ranid herpesvirus 2;t__ 0 0 0 0 0 0 0 4636 4636 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas anticariensis;t__Halomonas anticariensis FP35 = DSM 16096 0 1 4 0 1 16 0 101249 101271 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 1706;t__ 0 0 0 0 0 0 0 1111 1111 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio longus;t__Desulfovibrio longus DSM 6739 0 0 104 1 0 130 0 73766 74001 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ozensis;t__Lactobacillus ozensis DSM 23829 = JCM 17196 0 0 0 0 5 14 0 29476 29495 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Acholeplasma;s__Acholeplasma hippikon;t__Acholeplasma hippikon ATCC 29725 0 0 0 0 0 32 0 28547 28579 k__Bacteria;p__Chloroflexi;c__Dehalococcoidia;o__Dehalococcoidales;f__Dehalococcoidaceae;g__Dehalococcoides;s__Dehalococcoides mccartyi;t__Dehalococcoides mccartyi CG5 0 0 0 0 0 0 504 26739 27243 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma spumans;t__Mycoplasma spumans ATCC 19526 0 0 0 0 0 7 0 16606 16613 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma fermentans;t__Mycoplasma fermentans PG18 0 0 0 0 0 2 0 19836 20000 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__;s__Coriobacteriaceae bacterium BV3Ac1;t__ 84 16 0 22 0 0 0 35869 35991 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Mesoaciditogales;f__Mesoaciditogaceae;g__Mesoaciditoga;s__Mesoaciditoga lauensis;t__Mesoaciditoga lauensis cd-1655R = DSM 25116 0 0 0 0 0 0 0 43290 43290 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus faecalis;t__Enterococcus faecalis V583 0 0 2 0 0 0 0 2556 2835 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi21dt1virus;s__Streptococcus phage DT1;t__ 0 0 0 0 37 5 0 654 696 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava dalianensis;t__ 0 0 25 0 260 0 0 83106 83391 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Magnetospira;s__Magnetospira sp. QH-2;t__ 0 1 10 1 2 0 0 80412 80426 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Caldicellulosiruptor;s__Caldicellulosiruptor sp. Rt8.B8;t__ 0 2 0 0 0 0 0 49765 49767 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Noviherbaspirillum;s__Noviherbaspirillum sp. Root189;t__ 0 1 4 15 31 5 0 122720 122776 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Salinicoccus;s__Salinicoccus luteus;t__Salinicoccus luteus DSM 17002 0 0 2 3 2 31 0 51020 51058 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer sojae;t__Ensifer sojae CCBAU 05684 0 0 0 19 61 6 0 118762 118848 k__Archaea;p__Thaumarchaeota;c__;o__;f__;g__Candidatus Nitrosopelagicus;s__Candidatus Nitrosopelagicus brevis;t__ 0 0 4 0 0 0 0 24638 24642 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Grimontia;s__Grimontia indica;t__ 0 0 8 0 43 34 0 110824 110909 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halotalea;s__Halotalea alkalilenta;t__ 0 4 43 12 49 0 0 87640 87748 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio wodanis;t__ 0 0 18 0 184 378 0 89791 90371 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium ramulus;t__Eubacterium ramulus ATCC 29099 37 62 0 1792 0 30 0 66397 68318 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina woesei;t__ 0 32 7 9 0 56 0 48621 48725 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Faecalicatena;s__Faecalicatena fissicatena;t__ 0 2 0 0 26 119 0 99795 99942 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Blautia;s__Blautia hansenii;t__Blautia hansenii DSM 20583 7 1 0 60 128 0 0 60757 60953 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Labrenzia;s__Labrenzia alba;t__ 0 0 6 0 109 44 0 137809 137968 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Rivularia;s__Rivularia sp. PCC 7116;t__ 0 0 0 0 0 0 0 604 604 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium sanctipauli;t__ 0 0 5 0 16 53 0 110618 110692 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Limnobacter;s__Limnobacter sp. MED105;t__ 0 0 3 6 2 0 0 67711 67722 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Propionibacterium;s__Propionibacterium acidifaciens;t__Propionibacterium acidifaciens DSM 21887 0 0 12 0 4 0 0 60690 60706 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__Competibacteraceae;g__Candidatus Competibacter;s__Candidatus Competibacter denitrificans;t__Candidatus Competibacter denitrificans Run_A_D11 0 1 4 0 1 0 0 77615 77621 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus sp. ChDC B134;t__ 0 27 0 0 0 21 0 29934 29982 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus warneri;t__Staphylococcus warneri SG1 0 0 0 0 0 1 0 1042 1479 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Norway rat pestivirus;t__ 0 0 0 0 0 0 0 259 259 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus equorum;t__ 0 7 5 29 0 530 0 55872 56443 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis ganjiahuensis;t__Nocardiopsis ganjiahuensis DSM 45031 0 0 2 1 0 77 0 146859 146939 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava pacifica;t__Thioclava pacifica DSM 10166 0 8 2 0 109 74 0 74297 74490 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas macacae;t__Porphyromonas macacae DSM 20710 = JCM 13914 0 0 0 41 0 10 0 44166 44217 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Hydrogenovibrio;s__Hydrogenovibrio marinus;t__Hydrogenovibrio marinus DSM 11271 0 0 19 0 14 0 0 52149 52182 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Halocynthiibacter;s__Halocynthiibacter namhaensis;t__ 0 1 0 1 18 3 0 70553 70576 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Solimonas;s__Solimonas flava;t__Solimonas flava DSM 18980 0 0 1 0 6 59 0 89039 89105 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter bizzozeronii;t__Helicobacter bizzozeronii CIII-1 1 0 1 3 0 1 0 34898 34904 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga lonarensis;t__Methylophaga lonarensis MPL 0 1 9 0 0 0 0 52525 52535 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio campbellii;t__Vibrio campbellii ATCC BAA-1116 0 2 20 0 11 1585 0 117767 119385 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Polaromonas;s__Polaromonas sp. JS666;t__ 0 0 0 0 0 0 0 13952 13966 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus misasensis;t__Deinococcus misasensis DSM 22328 0 0 0 0 0 3 0 101342 101345 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas virus Aeh1;t__ 0 0 0 0 0 0 0 4664 4664 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia pestis;t__Yersinia pestis CO92 0 0 0 0 0 166 0 3152 3518 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia alkalitolerans;t__Massilia alkalitolerans DSM 17462 0 0 0 0 1 82 0 121872 121955 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hellea;s__Hellea balneolensis;t__Hellea balneolensis DSM 19091 0 0 1 1 0 0 0 64148 64150 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera aquaemixtae;t__ 89 0 0 0 42 0 0 92076 92207 k__Bacteria;p__Verrucomicrobia;c__Opitutae;o__Opitutales;f__Opitutaceae;g__Opitutus;s__Opitutus terrae;t__Opitutus terrae PB90-1 0 0 0 0 1 0 0 119151 119152 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides salanitronis;t__Bacteroides salanitronis DSM 18170 2 3 0 731 0 423 0 83697 84856 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Apis mellifera filamentous virus;t__ 0 0 0 0 0 0 0 9916 9916 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter mucosalis;t__ 73 7 0 0 3 20 0 34852 34955 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia sp. WG5;t__ 0 0 30 42 19 2682 0 118218 120991 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Neofamilia;s__Neofamilia massiliensis;t__ 0 27 0 0 0 0 0 38376 38403 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix;s__Thiothrix lacustris;t__Thiothrix lacustris DSM 21227 0 0 1 2 0 5 0 74167 74175 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Pontibacillus;s__Pontibacillus halophilus;t__Pontibacillus halophilus JSM 076056 = DSM 19796 0 0 0 0 1 2 0 73320 73323 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Lamprocystis;s__Lamprocystis purpurea;t__Lamprocystis purpurea DSM 4197 30 13 73 0 6 0 0 137436 137591 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus silvanus;t__Meiothermus silvanus DSM 9946 0 0 0 0 0 0 0 8838 9443 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Limnohabitans;s__Limnohabitans sp. 103DPR2;t__ 0 3 10 10 64 5 0 58883 58975 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Candidatus Accumulibacter;s__Candidatus Accumulibacter phosphatis;t__Candidatus Accumulibacter phosphatis clade IIA str. UW-1 0 1 29 0 0 0 0 101140 101170 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Lawsonia;s__Lawsonia intracellularis;t__Lawsonia intracellularis PHE/MN1-00 0 0 0 0 0 0 0 5224 5224 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio alginolyticus;t__ 0 0 0 0 0 0 0 4458 4483 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Sporosarcina;s__Sporosarcina sp. D27;t__ 1 0 1 29 3 15 0 72506 72555 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Verrucomicrobiaceae;g__Verrucomicrobium;s__Verrucomicrobium spinosum;t__Verrucomicrobium spinosum DSM 4136 = JCM 18804 4 0 0 0 0 0 0 164413 164417 k__Bacteria;p__Nitrospirae;c__Nitrospira;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira;s__Nitrospira moscoviensis;t__ 0 0 0 0 0 8 0 91781 91789 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv11;o__;f__;g__;s__;t__ 0 853 0 0 0 0 0 0 853 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hirschia;s__Hirschia baltica;t__Hirschia baltica ATCC 49814 0 0 0 0 5 0 0 69107 69112 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax elongans;t__Haloferax elongans ATCC BAA-1513 0 0 38 0 0 46 0 78910 78994 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus cerbereus;t__Meiothermus cerbereus DSM 11376 1 0 0 0 7 404 0 60071 60483 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Nesiotobacter;s__Nesiotobacter exalbescens;t__Nesiotobacter exalbescens DSM 16456 0 0 9 0 4 0 0 82933 82946 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Thiomonas;s__Thiomonas sp. FB-Cd;t__ 0 2 2 15 4 0 0 87737 87760 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium tropici;t__Rhizobium tropici CIAT 899 0 2 0 13 65 79 0 76582 76741 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7424;t__ 0 0 0 0 0 0 0 11838 12220 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma alkalescens;t__Mycoplasma alkalescens 14918 0 0 0 0 0 8 0 15395 15403 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;t__Salmonella enterica subsp. enterica 0 0 0 112 77 0 0 5507 6491 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas endodontalis;t__Porphyromonas endodontalis ATCC 35406 5 0 0 46 0 15 0 41153 41219 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Celeribacter;s__Celeribacter baekdonensis;t__Celeribacter baekdonensis B30 0 0 3 0 902 0 0 85687 86592 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Kinetoplastibacterium;s__Candidatus Kinetoplastibacterium crithidii;t__Candidatus Kinetoplastibacterium crithidii TCC036E 0 2 37 0 0 60 0 16339 16438 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces graevenitzii;t__Actinomyces graevenitzii C83 26 93 3 0 3 19 0 43749 43893 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus aviarius;t__Lactobacillus aviarius subsp. aviarius 5 106 3 0 1 47 0 33369 33531 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Soil782;t__ 0 0 33 22 22 12 0 68328 68417 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus intermedius;t__Streptococcus intermedius B196 1 449 0 15 0 974 0 38485 39924 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium sp. SY8519;t__ 9 0 0 322 0 5 0 56378 56714 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Wohlfahrtiimonas;s__Wohlfahrtiimonas chitiniclastica;t__ 0 0 4 0 1 0 0 43632 43637 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax atlanticus;t__ 0 0 0 0 185 13 0 92460 92658 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus senegalensis;t__Peptoniphilus senegalensis JC140 0 49 0 0 0 0 0 36161 36210 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas fragariae;t__ 0 0 1 0 51 158 0 84442 84652 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas huangheensis;t__ 0 0 23 0 0 0 0 95126 95149 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chitinibacter;s__Chitinibacter tainanensis;t__Chitinibacter tainanensis DSM 15459 0 0 5 3 7 0 0 68438 68453 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio magneticus;t__Desulfovibrio cf. magneticus IFRC170 0 0 0 1 1 60 55 96759 96876 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcidiopsidales;f__Chroococcidiopsidaceae;g__Chroococcidiopsis;s__Chroococcidiopsis thermalis;t__Chroococcidiopsis thermalis PCC 7203 0 0 23 0 0 0 0 126292 126315 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax nanhaiticus;t__ 0 0 160 1 0 303 0 82129 82593 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus ratti;t__Streptococcus ratti FA-1 = DSM 20564 0 0 0 4 0 172 0 41054 41230 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax halodurans;t__Roseivivax halodurans JCM 10272 0 0 0 0 25 7 0 89533 89565 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter pickeringii;t__ 0 0 3 11 0 72 0 72287 72373 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Planctopirus;s__Planctopirus limnophila;t__Planctopirus limnophila DSM 3776 0 0 0 0 0 0 0 108461 108461 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Spirosoma;s__Spirosoma panaciterrae;t__Spirosoma panaciterrae DSM 21099 0 1 0 1 0 8 0 162186 162196 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Anaerotruncus;s__Anaerotruncus sp. G3(2012);t__ 0 0 0 996 94 0 0 68931 70021 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus basilensis;t__ 0 0 8 45 208 84 0 168082 168427 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Pieris rapae granulovirus;t__ 0 0 0 0 0 0 0 2171 2171 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Cohnella;s__Cohnella kolymensis;t__ 0 0 0 3 9 0 0 86820 86832 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alteromonas;s__Alteromonas stellipolaris;t__ 0 0 0 0 0 0 0 4983 5043 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Rodentibacter;s__Rodentibacter pneumotropicus;t__Rodentibacter pneumotropicus DSM 21403 2 0 4 0 7 0 0 45054 45067 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus albus;t__Ruminococcus albus 7 = DSM 20455 0 0 0 2 9 21 0 73676 73708 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira arctica;t__Thiomicrospira arctica DSM 13458 0 0 19 0 18 15 0 50988 51040 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Jeotgalicoccus;s__Jeotgalicoccus saudimassiliensis;t__ 0 0 1 12 12 199 0 43597 43821 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Eggerthella;s__Eggerthella sp. YY7918;t__ 49 0 0 0 10 10 0 62404 62473 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia buchneri;t__ 0 0 0 0 0 1882 0 27763 29645 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thioalkalimicrobium;s__Thioalkalimicrobium aerophilum;t__Thioalkalimicrobium aerophilum AL3 0 1 14 0 8 86 0 43058 43167 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter;s__Polynucleobacter duraquae;t__ 0 0 0 10 3 83 0 40429 40525 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hp1virus;s__Pasteurella phage F108;t__ 0 0 0 0 0 0 0 610 610 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus spicheri;t__Lactobacillus spicheri DSM 15429 0 0 1 1 1 24 0 54832 54859 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobrevibacter;s__Methanobrevibacter smithii;t__Methanobrevibacter smithii ATCC 35061 0 0 0 0 0 8 0 37055 37063 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus algidus;t__Lactobacillus algidus DSM 15638 0 1 4 9 5 87 0 31647 31753 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Verrucomicrobia subdivision 3;g__Pedosphaera;s__Pedosphaera parvula;t__Pedosphaera parvula Ellin514 0 0 0 0 0 0 0 148096 148096 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfitobacterium;s__Desulfitobacterium dehalogenans;t__Desulfitobacterium dehalogenans ATCC 51507 0 1 0 0 60 0 0 86374 86435 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus pyogenes;t__Streptococcus pyogenes serotype M1 0 2 1 19 0 2441 0 34366 37048 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia enterocolitica;t__Yersinia enterocolitica subsp. palearctica 0 0 27 157 153 121 12496 78114 91068 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Pseudaminobacter;s__Pseudaminobacter salicylatoxidans;t__Pseudaminobacter salicylatoxidans KCT001 0 0 8 28 45 0 0 92069 92150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Hemileuca sp. nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2812 2812 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. JA-2-3B'a(2-13);t__ 0 1 1 3 1 1093 0 59834 60933 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Taylorella;s__Taylorella equigenitalis;t__Taylorella equigenitalis ATCC 35865 0 0 4 1 17 183 0 34437 34642 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. CC9311;t__ 0 0 2 31 0 93 0 52008 52134 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas beringensis;t__ 36 3 1 0 0 129 0 75666 75835 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__;s__Peptococcaceae bacterium CEB3;t__ 0 0 0 0 0 0 0 106008 106008 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria cinerea;t__Neisseria cinerea ATCC 14685 2 8 1 3 16 524 0 36830 37390 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. HL-93;t__ 0 1 24 0 0 30 0 82832 82887 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Porticoccaceae;g__Porticoccus;s__Porticoccus hydrocarbonoclasticus;t__Porticoccus hydrocarbonoclasticus MCTG13d 0 0 1 5 0 0 0 49480 49493 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Kluyvera;s__Kluyvera intermedia;t__ 0 15 0 368 2008 0 0 7893 12740 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Pseudanabaenaceae;g__Prochlorothrix;s__Prochlorothrix hollandica;t__Prochlorothrix hollandica PCC 9006 = CALU 1027 0 0 0 1 0 0 0 112056 112057 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus;s__Acidaminococcus fermentans;t__Acidaminococcus fermentans DSM 20731 0 0 12 0 9 0 0 46574 46595 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella catarrhalis;t__Moraxella catarrhalis BBH18 6 3 7 0 30 120 0 37099 37265 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus simplex;t__ 0 0 0 0 0 0 0 3134 3524 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Pararhodospirillum;s__Pararhodospirillum photometricum;t__Pararhodospirillum photometricum DSM 122 0 2 2 3 1 0 0 77515 77523 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus jannaschii;t__Methanocaldococcus jannaschii DSM 2661 0 0 0 0 2 21 0 33276 33299 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. WH 7803;t__ 0 0 1 41 0 32 0 47265 47339 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfotomaculum;s__Desulfotomaculum reducens;t__Desulfotomaculum reducens MI-1 1 10 11 0 0 3 0 72137 72162 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus plurextorum;t__Streptococcus plurextorum DSM 22810 13 129 0 20 0 523 0 41262 41948 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P680;t__ 0 0 0 0 52 28 0 512 592 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella oakridgensis;t__Legionella oakridgensis ATCC 33761 = DSM 21215 0 0 0 0 0 1 0 1002 1004 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus mycoides;t__ 0 0 0 0 0 0 0 7546 7620 k__Bacteria;p__Firmicutes;c__Clostridia;o__;f__;g__;s__Clostridia bacterium UC5.1-1E11;t__ 3 75 696 0 0 2 0 59024 59800 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas levii;t__Porphyromonas levii DSM 23370 1 2 0 39 0 11 0 50000 50053 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Moorella;s__Moorella thermoacetica;t__Moorella thermoacetica ATCC 39073 0 0 0 1 0 87 0 52487 52575 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus cristatus;t__Streptococcus cristatus AS 1.3089 0 39 1 22 0 618 0 42161 42841 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Sinorhizobium phage phiLM21;t__ 0 0 0 0 0 0 0 1016 1016 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Skermanella;s__Skermanella stibiiresistens;t__Skermanella stibiiresistens SB22 27 60 2 0 0 0 0 156923 157012 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas putida;t__Pseudomonas putida KT2440 0 21 23 0 0 319 0 123274 123637 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Rhodoferax;s__Rhodoferax saidenbachensis;t__ 0 0 1 8 76 0 0 85212 85297 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. CC9902;t__ 0 0 4 23 0 39 0 44630 44696 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O104:H4 0 0 0 39 29 0 73 2905 3282 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;t__Cylindrospermum stagnale PCC 7417 0 0 0 0 37 0 0 11677 12128 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina thermophila;t__Methanosarcina thermophila TM-1 0 0 0 0 0 0 0 62547 62547 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus curdlanolyticus;t__Paenibacillus curdlanolyticus YK9 0 0 1 35 2 229 0 108689 108956 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Candidatus Arthromitus;s__Candidatus Arthromitus sp. SFB-mouse;t__Candidatus Arthromitus sp. SFB-mouse-Japan 0 0 0 0 18 231 0 32151 32400 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Orgyia leucostigma nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 3123 3123 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__Kallipyga;s__Kallipyga massiliensis;t__Kallipyga massiliensis ph2 114 111 112 0 0 227 0 34436 35000 k__Bacteria;p__Proteobacteria;c__Zetaproteobacteria;o__;f__;g__;s__Zetaproteobacteria bacterium TAG-1;t__ 0 3 2 0 0 0 0 43242 43247 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Pelobacter;s__Pelobacter carbinolicus;t__Pelobacter carbinolicus DSM 2380 3 0 2 7 18 0 0 73287 73317 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter psychrotolerans;t__ 0 0 0 0 35 23 0 101346 101404 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter iguaniorum;t__ 0 0 1 3 10 126 0 33552 33692 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Actinobacillus;s__Actinobacillus pleuropneumoniae;t__Actinobacillus pleuropneumoniae serovar 5 1 0 37 0 89 0 0 45361 45489 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Macacine betaherpesvirus 3;t__ 0 0 0 0 0 0 0 4429 4429 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylotenera;s__Methylotenera versatilis;t__Methylotenera versatilis 301 0 0 14 4 66 57 0 61056 61197 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7502;t__ 0 0 1 6 0 0 0 70198 70205 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus halotolerans;t__ 0 1 1 13 0 177 0 43449 43641 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Sulfolobus islandicus rod-shaped virus 1;t__ 0 0 0 0 0 0 0 646 646 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter nanhaiticus;t__Marinobacter nanhaiticus D15-8W 0 0 9 0 0 37 0 107096 107142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterococcus phage EFDG1;t__ 0 0 0 0 0 0 0 2951 2951 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Fructobacillus;s__Fructobacillus fructosus;t__Fructobacillus fructosus KCTC 3544 0 0 1 1 3 29 0 29227 29261 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella salivae;t__Prevotella salivae DSM 15606 0 1 0 122 2 463 0 61729 62317 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Gallionellales;f__Gallionellaceae;g__Gallionella;s__Gallionella capsiferriformans;t__Gallionella capsiferriformans ES-2 0 3 22 0 19 0 0 63205 63249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus MCE2014;t__Staphylococcus phage MCE-2014 0 0 0 0 8 667 0 2163 2838 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Rubritaleaceae;g__Rubritalea;s__Rubritalea marina;t__Rubritalea marina DSM 17716 0 0 0 1 0 0 0 60200 60201 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Budviciaceae;g__Budvicia;s__Budvicia aquatica;t__Budvicia aquatica DSM 5075 = ATCC 35567 0 0 0 9 3 0 0 112821 112833 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Raccoonpox virus;t__ 0 0 0 0 0 32 0 4261 4293 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas ruminantium;t__ 0 4 3 0 6 0 14 54862 54889 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Macrococcus;s__Macrococcus caseolyticus;t__Macrococcus caseolyticus JCSC5402 0 5 1 20 61 0 0 41959 42046 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium inhibens;t__Carnobacterium inhibens subsp. gilichinskyi 0 0 0 1 0 0 0 2727 2978 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus lacrimalis;t__Peptoniphilus lacrimalis DSM 7455 16 377 12 0 517 1354 0 34668 36944 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma columbinum;t__Mycoplasma columbinum ATCC 29257 0 0 0 0 0 33 0 15240 15273 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Kozakia;s__Kozakia baliensis;t__ 0 2 2 0 144 0 0 57612 57760 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Cnaphalocrocis medinalis granulovirus;t__ 0 0 0 0 0 0 0 2224 2224 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter sp. 1-3;t__ 0 1 0 77 0 20 0 88427 88525 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylophilus;s__Methylophilus methylotrophus;t__Methylophilus methylotrophus DSM 46235 = ATCC 53528 0 0 5 2 9 1 0 57155 57172 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella fallonii;t__Legionella fallonii LLAP-10 0 0 0 0 0 0 0 5019 5064 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Eikenella;s__Eikenella corrodens;t__Eikenella corrodens ATCC 23834 0 18 0 3 91 0 0 42474 42586 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Ectropis obliqua nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2624 2624 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia rhizoxinica;t__Paraburkholderia rhizoxinica HKI 454 1 0 1 16 63 6 0 55012 55099 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylosinus;s__Methylosinus trichosporium;t__Methylosinus trichosporium OB3b 0 2 0 14 24 0 0 99201 99241 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Chlorobaculum;s__Chlorobaculum tepidum;t__Chlorobium tepidum TLS 0 0 0 0 16 16 0 43066 43098 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella oxytoca;t__ 10 3 54 275 1612 77 0 123035 125149 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Neorickettsia;s__Neorickettsia sennetsu;t__Neorickettsia sennetsu str. Miyayama 0 0 0 0 0 6 0 17174 17180 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter;s__Polynucleobacter necessarius;t__Polynucleobacter necessarius subsp. necessarius 0 0 0 5 1 0 0 31203 31209 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Simian torque teno virus 32;t__ 0 0 0 0 0 0 0 76 76 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas asaccharolytica;t__Porphyromonas asaccharolytica DSM 20707 7 3 2 19 3 48 0 43645 43727 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium rubi;t__Rhizobium rubi NBRC 13261 0 1 1 1 19 233 0 105504 105759 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus pseudofirmus;t__Bacillus pseudofirmus OF4 0 0 0 0 0 0 0 7122 7803 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium vaginae;t__Atopobium vaginae DSM 15829 0 0 0 0 0 4 0 28596 28600 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Cydia pomonella granulovirus;t__ 0 0 0 0 0 0 0 2469 2469 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ascoviridae;o__;f__;g__Ascovirus;s__Trichoplusia ni ascovirus 2c;t__ 0 0 0 0 0 0 0 3481 3481 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc kimchii;t__Leuconostoc kimchii IMSNU 11154 0 0 0 2 7 7 0 1707 1974 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Taylorella;s__Taylorella asinigenitalis;t__Taylorella asinigenitalis MCE3 0 1 1 6 12 0 0 32751 32771 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophaceae;g__Desulfomonile;s__Desulfomonile tiedjei;t__Desulfomonile tiedjei DSM 6799 0 0 0 0 0 0 0 130002 130002 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus ghanensis;t__Lactobacillus ghanensis DSM 18630 0 0 1 1 7 98 0 51895 52002 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Amorphus;s__Amorphus coralli;t__Amorphus coralli DSM 19760 0 0 2 5 0 0 0 86315 86322 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Alloprevotella;s__Alloprevotella rava;t__Alloprevotella rava F0323 0 0 0 83 890 73 0 50622 51668 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Brucellaceae;g__Pseudochrobactrum;s__Pseudochrobactrum sp. AO18b;t__ 0 0 1 17 14 0 0 74036 74068 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chromobacterium;s__Chromobacterium subtsugae;t__ 0 0 0 5 3 0 0 93205 93213 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema succinifaciens;t__Treponema succinifaciens DSM 2489 0 0 0 0 0 0 0 3114 3311 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Photobacterium;s__Photobacterium profundum;t__Photobacterium profundum SS9 0 0 0 0 0 0 0 1600 1600 k__Bacteria;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia muridarum;t__Chlamydia muridarum str. Nigg 0 0 0 0 0 117 0 21341 21458 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Dialister;s__Dialister invisus;t__Dialister invisus DSM 15470 0 1 0 0 0 0 0 37915 37916 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria sp. 74A18;t__ 0 49 0 0 1 348 0 50898 51296 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus manihotivorans;t__Lactobacillus manihotivorans DSM 13343 = JCM 12514 0 0 1 70 11 263 0 61477 61829 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus haemolyticus;t__Staphylococcus haemolyticus JCSC1435 15 10 2 16 0 673 0 52631 53700 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Muribacter;s__Muribacter muris;t__ 0 20 34 0 128 0 0 48730 48912 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella oryzae;t__Weissella oryzae SG25 0 0 3 4 0 17 0 42432 42456 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis lucentensis;t__Nocardiopsis lucentensis DSM 44048 0 0 2 1 0 6 0 124449 124458 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp. JSC-1;t__ 0 0 6 0 0 0 0 151326 151332 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter arcticus;t__Psychrobacter arcticus 273-4 0 2 2 0 11 175 0 52824 53014 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium P6A3;t__ 0 0 0 4 17 15 0 59511 59547 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas ruminantium;t__Selenomonas ruminantium subsp. lactilytica 0 7 8 7 44 13 56 59938 60073 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XIII. Incertae Sedis;g__;s__Clostridiales bacterium S5-A14a;t__ 19 430 0 139 7 2 0 29997 30594 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Epsilon15virus;s__Salmonella virus Epsilon15;t__Salmonella phage epsilon15 0 0 0 0 0 0 0 793 793 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus tetradius;t__Anaerococcus tetradius ATCC 35098 17 262 0 0 516 232 0 40769 41796 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas canoris;t__ 0 1 0 9 0 35 0 43982 44027 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylophilus;s__Methylophilus sp. 5;t__ 0 0 23 0 33 61 0 60539 60656 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena sp. PCC 6802;t__ 0 0 1 6 0 4 0 112335 112346 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv3;o__;f__;g__;s__;t__ 0 1039 0 0 0 0 0 729 1768 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes inops;t__ 0 2 0 0 0 0 0 45964 45966 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Prochlorococcus phage P-SSM4;t__ 0 0 0 0 0 0 0 3564 3564 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Human bocavirus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage TP-J34;t__ 0 0 0 0 120 25 0 767 912 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Candidatus Methylopumilus;s__Candidatus Methylopumilus turicensis;t__ 0 0 0 0 0 0 0 35099 35099 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuchan romanomermis nematode virus 2;t__ 0 0 0 0 0 0 0 198 198 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma salivarium;t__Mycoplasma salivarium ATCC 23064 0 0 0 0 0 14 0 14226 14240 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] methylpentosum;t__[Clostridium] methylpentosum DSM 5476 9 4 0 357 11 0 0 67467 67848 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] asparagiforme;t__[Clostridium asparagiforme] DSM 15981 0 0 0 296 94 18 0 122865 123273 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Facklamia;s__Facklamia sourekii;t__Facklamia sourekii ATCC 700629 0 0 0 0 0 0 0 41220 41220 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium barchaimii;t__Novosphingobium barchaimii LL02 136 194 14 79 3826 552 27 101253 106081 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus delbrueckii;t__Lactobacillus delbrueckii subsp. bulgaricus 5 0 13 16 0 112 0 37153 37299 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai rhabdo-like virus 4;t__ 0 0 0 0 0 0 0 214 214 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Mannheimia;s__Mannheimia haemolytica;t__Mannheimia haemolytica M42548 20 28 108 0 1224 0 0 50669 54637 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mellis;t__ 0 0 3 0 0 26 0 35740 35769 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli UMN026 0 0 0 0 0 0 0 2735 3117 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus hamelinensis;t__Halococcus hamelinensis 100A6 0 0 41 2 0 6 0 68247 68296 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Aestuariibacter;s__Aestuariibacter salexigens;t__Aestuariibacter salexigens DSM 15300 0 0 1 1 2 0 0 75609 75613 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Ateline gammaherpesvirus 3;t__ 0 0 0 0 0 0 0 2168 2168 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum BKT015925 0 0 0 0 0 0 0 8203 8681 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 5;t__ 0 0 0 0 0 0 0 159 159 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Oceanospirillum;s__Oceanospirillum beijerinckii;t__Oceanospirillum beijerinckii DSM 7166 0 0 2 0 0 5 0 106075 106082 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus antri;t__Lactobacillus antri DSM 16041 23 1 3 11 1 134 0 44531 44704 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella;s__Granulicella tundricola;t__Granulicella tundricola MP5ACTX9 0 0 0 0 3 0 0 86180 86183 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alteromonas;s__Alteromonas macleodii;t__Alteromonas macleodii ATCC 27126 5 0 24 30 12 255 0 92751 93077 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Jimmervirus;s__Brevibacillus virus Osiris;t__Brevibacillus phage Osiris 0 0 0 0 897 0 0 162 1059 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Brucellaceae;g__Ochrobactrum;s__Ochrobactrum anthropi;t__Ochrobactrum anthropi ATCC 49188 0 2 1052 1008 58 126 0 93413 95661 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus oligofermentans;t__Lactobacillus oligofermentans DSM 15707 = LMG 22743 0 0 3 0 0 78 0 36496 36578 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__;s__[Clostridium] ultunense;t__[Clostridium ultunense] DSM 10521 0 65 4 0 0 0 0 62249 62318 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter phenylpyruvicus;t__Psychrobacter phenylpyruvicus DSM 7000 = NBRC 102152 0 3 0 0 7 10 0 61741 61761 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix;s__Thiothrix flexilis;t__Thiothrix flexilis DSM 14609 0 0 5 0 0 0 0 75572 75577 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Aphanothecaceae;g__Rubidibacter;s__Rubidibacter lacunae;t__Rubidibacter lacunae KORDI 51-2 0 0 6 0 0 0 0 82882 82888 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Leporipoxvirus;s__Rabbit fibroma virus;t__ 0 0 0 0 0 1 0 3196 3197 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus;s__Mobiluncus curtisii;t__Mobiluncus curtisii ATCC 43063 75 0 2 0 6 0 0 42846 42929 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter malorum;t__ 0 0 2 0 27 33 0 76499 76561 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus capitis;t__Staphylococcus capitis subsp. capitis 0 2 3 18 0 94 0 48736 48872 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Spodoptera frugiperda multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2626 2626 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira halophila;t__Thiomicrospira halophila DSM 15072 0 0 20 0 7 25 0 47073 47125 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Fibrella;s__Fibrella aestuarina;t__Fibrella aestuarina BUZ 2 0 1 0 3 11 0 0 135310 135325 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia sp. Root685;t__ 0 0 0 3 0 101 0 87832 87936 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Azorhizobium;s__Azorhizobium caulinodans;t__Azorhizobium caulinodans ORS 571 0 0 0 21 0 0 0 107374 107395 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus furiosus;t__Pyrococcus furiosus DSM 3638 0 0 0 0 0 0 0 38165 38165 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas entomophila;t__Pseudomonas entomophila L48 0 0 32 0 0 616 0 117127 117775 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus marmoris;t__Deinococcus marmoris DSM 12784 0 0 0 0 0 8 0 95510 95518 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma pneumoniae;t__Mycoplasma pneumoniae M129 0 0 0 0 0 21 0 16306 16327 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sigmavirus;s__Drosophila obscura sigmavirus;t__Drosophila obscura sigmavirus 10A 0 0 0 0 0 0 0 253 253 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus simiae;t__Staphylococcus simiae CCM 7213 1 0 0 3 0 95 0 50576 50675 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Hapavirus;s__Ngaingan hapavirus;t__ 0 0 0 0 0 0 0 315 315 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus bifermentans;t__Lactobacillus bifermentans DSM 20003 0 0 2 1 12 1020 0 61323 62363 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia sp. DD3;t__ 19 30 105 59 11 75 0 104944 105243 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio nitratireducens;t__Thioalkalivibrio nitratireducens DSM 14787 0 0 2 0 0 13 0 80031 80046 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kunkeei;t__ 0 0 4 7 1 198 0 32080 32290 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracollinoides;t__ 0 0 11 1 0 119 0 69407 69538 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus alvei;t__Paenibacillus alvei DSM 29 0 0 7 55 12 248 0 130715 131037 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Oblitimonas;s__Oblitimonas alkaliphila;t__ 0 0 50 2 93 0 0 49735 49880 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phinm2;t__ 5 0 0 0 128 633 0 96 862 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Piscirickettsia;s__Piscirickettsia salmonis;t__Piscirickettsia salmonis LF-89 = ATCC VR-1361 0 0 0 0 0 0 0 3811 5300 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Pirellula;s__Pirellula staleyi;t__Pirellula staleyi DSM 6068 0 0 0 0 0 0 0 123923 123923 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella algae;t__ 0 0 9 0 0 1 0 100012 100022 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella schoenbuchensis;t__Bartonella schoenbuchensis m07a 0 0 1 22 0 153 0 32181 32357 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus warneri;t__Staphylococcus warneri SG1 8 153 2 15 0 554 0 48988 49720 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 6312;t__ 0 0 1 3 0 0 0 73941 73945 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__;s__Rhodobacteraceae bacterium HIMB11;t__ 0 0 0 0 49 1 0 61861 61911 k__Bacteria;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Prosthecochloris;s__Prosthecochloris aestuarii;t__Prosthecochloris aestuarii DSM 271 4 0 0 0 51 0 0 50203 50258 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus schleiferi;t__ 21 1 35 20 3 805 0 50707 51658 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconacetobacter;s__Gluconacetobacter diazotrophicus;t__Gluconacetobacter diazotrophicus PA1 5 0 4 0 0 105 0 0 77640 77749 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. LTSP857;t__ 0 0 0 0 7 328 0 168047 168382 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium sp. oral taxon 199;t__Atopobium sp. oral taxon 199 str. F0494 3 0 0 0 6 151 0 33038 33198 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter norwichensis;t__Hymenobacter norwichensis DSM 15439 0 0 0 0 1 3 0 120129 120133 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Marichromatium;s__Marichromatium purpuratum;t__Marichromatium purpuratum 984 0 3 16 4 9 0 0 75550 75582 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Chromohalobacter;s__Chromohalobacter salexigens;t__Chromohalobacter salexigens DSM 3043 0 2 27 0 41 0 0 73862 73932 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium fossor;t__Atopobium fossor DSM 15642 2 0 0 0 2 57 0 33060 33121 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Bhargavaea;s__Bhargavaea cecembensis;t__ 1 0 3 72 11 0 24 61919 62030 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus macacae;t__Streptococcus macacae NCTC 11558 0 2 2 20 0 84 0 38231 38339 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Streptococcus phage C1;t__ 0 0 0 0 0 0 0 333 333 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus buchneri;t__Lactobacillus buchneri CD034 0 1 12 2 3 420 0 49573 50011 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Scutavirus;s__Testudinid herpesvirus 3;t__ 0 0 0 0 0 0 0 3207 3207 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Facklamia;s__Facklamia languida;t__Facklamia languida CCUG 37842 3 43 39 6 7 58 0 33980 34136 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella minor;t__ 0 0 3 2 0 72 0 35182 35259 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus gordonii;t__Streptococcus gordonii str. Challis 0 1 0 61 0 75 0 43796 43933 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Cryobacterium;s__Cryobacterium roopkundense;t__ 0 0 2 1 42 0 0 86658 86703 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Marine gokushovirus;t__ 0 0 0 0 0 0 0 82 82 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Peptoniphilus;s__Peptoniphilus sp. oral taxon 375;t__Peptoniphilus sp. oral taxon 375 str. F0436 2 173 3 0 91 421 0 38320 39010 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cbastvirus;s__Cellulophaga virus ST;t__Cellulophaga phage phiST 0 0 0 0 0 0 0 1582 1582 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Staphylothermus;s__Staphylothermus hellenicus;t__Staphylothermus hellenicus DSM 12710 0 0 0 4 0 0 0 31602 31606 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kefiranofaciens;t__Lactobacillus kefiranofaciens ZW3 0 0 2 11 8 1482 0 40757 42260 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus auricularis;t__ 1 0 0 3 0 51 0 43874 43934 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Limnohabitans;s__Limnohabitans planktonicus;t__Limnohabitans planktonicus II-D5 0 0 0 5 34 0 0 93653 93692 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi18:3;t__ 0 0 0 0 0 0 0 1428 1428 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC2029;t__ 0 0 0 0 12 16 0 77166 77194 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Oligella;s__Oligella ureolytica;t__Oligella ureolytica DSM 18253 345 6 0 0 12 8 0 52797 53168 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax avenae;t__Acidovorax avenae subsp. avenae 0 1 1 19 147 39 0 109436 109643 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Thermoactinomycetaceae;g__Thermoactinomyces;s__Thermoactinomyces sp. CDF;t__ 0 0 1 4 0 5 0 49032 49042 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria meningitidis;t__Neisseria meningitidis serogroup B 7 0 0 3 5 1162 0 44270 45447 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter sp. JL475;t__ 1 0 1 13 3 123 0 65113 65254 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium saguini;t__Bifidobacterium saguini DSM 23967 0 0 0 0 1 213 0 55467 55681 k__Archaea;p__Thaumarchaeota;c__;o__;f__;g__Candidatus Nitrosotenuis;s__Candidatus Nitrosotenuis cloacae;t__ 0 0 4 0 0 0 0 32399 32403 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Spodoptera litura granulovirus;t__ 0 0 0 0 10 0 0 2472 2482 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Bombyx mori nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2568 2568 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter ailurogastricus;t__ 1 106 0 2 0 141 0 30909 31162 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus amylolyticus;t__Lactobacillus amylolyticus DSM 11664 3 8 2 4 0 109 0 30553 30679 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Arhodomonas;s__Arhodomonas aquaeolei;t__Arhodomonas aquaeolei DSM 8974 0 0 1 1 7 0 0 78938 78947 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Salinicoccus;s__Salinicoccus carnicancri;t__Salinicoccus carnicancri Crm 5 0 0 14 27 0 0 53312 53358 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Tsukamurellaceae;g__Tsukamurella;s__Tsukamurella paurometabola;t__Tsukamurella paurometabola DSM 20162 0 0 5 43 0 0 0 87550 87598 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Ldl1;t__ 0 0 0 0 0 0 0 1496 1496 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia mannitolilytica;t__ 0 119 174 844 143 1365 0 94988 97633 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. S7 MS 2;t__ 14 0 0 37 0 676 0 54982 55709 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas jannaschiana;t__Hyphomonas jannaschiana VP2 0 0 2 0 0 150 0 72611 72763 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O83:H1 0 0 0 25 0 0 108 2171 2941 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__;s__Urbanus proteus nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2113 2113 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Digitaria streak virus;t__ 0 0 0 0 0 0 0 54 54 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus frumenti;t__Lactobacillus frumenti DSM 13145 0 0 3 2 36 253 0 34324 34618 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassospira;s__Thalassospira lucentensis;t__Thalassospira lucentensis MCCC 1A00383 = DSM 14000 0 0 0 1 0 2 0 94883 94886 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Staphylothermus;s__Staphylothermus marinus;t__Staphylothermus marinus F1 0 0 0 0 0 0 0 31409 31409 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella loescheii;t__Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 0 7 0 0 8 803 0 69215 70033 k__Archaea;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus fervens;t__Methanocaldococcus fervens AG86 0 0 0 0 4 84 0 29613 29701 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus Troll;t__Bacillus phage Troll 0 0 0 0 1068 0 0 2192 3260 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Tyzzerella;s__[Clostridium] lactatifermentans;t__[Clostridium] lactatifermentans DSM 14214 28 355 0 884 497 86 0 68639 70489 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mameliella;s__Mameliella alba;t__ 1 0 0 0 106 0 0 116526 116633 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Sharpea;s__Sharpea azabuensis;t__Sharpea azabuensis DSM 18934 48 9 0 0 0 0 0 47961 48018 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus vaccinostercus;t__Lactobacillus vaccinostercus DSM 20634 0 0 2 16 3 476 0 50525 51030 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__[Eubacterium] eligens;t__[Eubacterium] eligens ATCC 27750 0 15 0 82 0 0 0 42786 42883 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Fructobacillus;s__Fructobacillus pseudoficulneus;t__ 0 0 1 1 0 0 0 28161 28163 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caballeronia;s__Caballeronia zhejiangensis;t__ 2 118 1 60 60 15 0 154870 155126 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter excellens;t__Marinobacter excellens HL-55 0 3 21 0 0 27 0 79928 79979 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus agri;t__Brevibacillus agri 5-2 0 0 1 3 3 55 0 109941 110003 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thioalkalimicrobium;s__Thioalkalimicrobium cyclicum;t__Thioalkalimicrobium cyclicum ALM1 0 1 15 0 8 20 0 38605 38649 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia discariae;t__ 0 0 9 0 0 143 0 157154 157306 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma haemocanis;t__Mycoplasma haemocanis str. Illinois 0 0 0 0 0 69 0 18330 18399 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sagittula;s__Sagittula stellata;t__Sagittula stellata E-37 11 0 0 0 120 0 0 105055 105186 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter noctilucae;t__ 0 0 0 0 101 26 0 78140 78267 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Fournierella;s__Fournierella massiliensis;t__ 11 199 0 496 333 0 0 75478 76517 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanoregulaceae;g__Methanoregula;s__Methanoregula formicica;t__Methanoregula formicica SMSP 0 0 0 1 2 0 0 56414 56417 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Oenococcus;s__Oenococcus kitaharae;t__Oenococcus kitaharae DSM 17330 0 0 0 0 0 0 0 166 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Spo1virus;s__Staphylococcus phage Sb-1;t__ 0 0 0 0 2382 0 0 161 2543 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinotignum;s__Actinotignum urinale;t__Actinotignum urinale DSM 15805 0 0 1 0 2 0 0 38347 38350 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Alteromonas;s__Alteromonas australica;t__ 12 0 34 24 4 0 0 86102 86176 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces europaeus;t__Actinomyces europaeus ACS-120-V-Col10b 0 0 19 0 2 3 0 38079 38103 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus condimenti;t__ 6 3 2 22 0 284 0 52876 53193 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina baltica;t__Idiomarina baltica OS145 0 42 26 5 0 0 0 54236 54309 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kalixensis;t__Lactobacillus kalixensis DSM 16043 0 0 0 0 0 1 0 41345 41346 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Ottowia;s__Ottowia sp. oral taxon 894;t__ 0 1 4 12 34 0 0 58464 58515 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__Hyphomicrobium sp. 99;t__ 0 0 0 1 1 29 0 82128 82159 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Tepidanaerobacter;s__Tepidanaerobacter syntrophicus;t__ 0 0 0 0 0 0 0 48541 48541 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Budviciaceae;g__Leminorella;s__Leminorella grimontii;t__Leminorella grimontii ATCC 33999 = DSM 5078 0 0 0 2 0 0 0 84321 84323 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Verrucomicrobiaceae;g__Verrucomicrobium;s__Verrucomicrobium sp. 3C;t__ 0 0 0 0 0 0 0 54920 54920 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Scutavirus;s__Chelonid alphaherpesvirus 5;t__Green turtle herpesvirus 0 0 0 0 0 0 0 458 458 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Leporipoxvirus;s__Myxoma virus;t__ 0 0 0 0 0 0 0 3235 3235 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Terribacillus;s__Terribacillus aidingensis;t__ 0 0 6 6 124 0 0 69636 69772 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Eubacterium] siraeum;t__[Eubacterium] siraeum DSM 15702 6 0 0 227 13 0 0 52776 53022 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus sp. EP1;t__ 0 0 0 0 3 36 0 36261 36304 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp. Root494;t__ 0 0 1 1 34 13 0 68756 68805 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella koreensis;t__Weissella koreensis KACC 15510 0 1 12 21 5 142 0 28268 28449 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Nosocomiicoccus;s__Nosocomiicoccus massiliensis;t__ 0 0 8 14 34 0 0 29850 29906 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium rimae;t__Atopobium rimae ATCC 49626 4 0 13 0 3 33 0 32457 32510 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Gorilla gorilla gorilla polyomavirus 1;t__ 0 0 0 0 0 0 0 105 105 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Herminiimonas;s__Herminiimonas sp. CN;t__ 0 0 3 6 33 0 0 67324 67366 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella nigrescens;t__Prevotella nigrescens ATCC 33563 5 0 0 122 74 985 0 50873 52084 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apis;t__ 0 1 0 0 0 1 0 30814 30816 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermodesulfobiaceae;g__Coprothermobacter;s__Coprothermobacter proteolyticus;t__Coprothermobacter proteolyticus DSM 5265 0 0 0 0 0 14 0 28484 28498 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Butyricicoccus;s__Butyricicoccus desmolans;t__Butyricicoccus desmolans ATCC 43058 5 5 0 231 0 0 0 52459 52700 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Allochromatium;s__Allochromatium vinosum;t__Allochromatium vinosum DSM 180 0 0 13 0 18 0 0 70507 70538 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter adhaerens;t__Marinobacter adhaerens HP15 30 0 28 0 0 310 0 88070 88438 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Chelativorans;s__Chelativorans sp. J32;t__ 0 1 895 1082 171 6 0 91746 93901 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus oralis;t__Streptococcus oralis subsp. tigurinus 5 227 2 7 0 867 0 42542 43651 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. Root1334;t__ 0 0 1 9 52 46 0 126047 126155 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylocystis;s__Methylocystis rosea;t__Methylocystis rosea SV97 0 0 1 5 1 28 0 78196 78231 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Gayadomonas;s__Gayadomonas joobiniege;t__Gayadomonas joobiniege G7 0 0 0 0 0 0 0 15386 15390 k__Bacteria;p__Cyanobacteria;c__;o__Chroococcales;f__Chroococcaceae;g__Chroogloeocystis;s__Chroogloeocystis siderophila;t__Chroogloeocystis siderophila 5.2 s.c.1 0 0 0 0 0 0 0 100121 100121 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus pomorum;t__Alicyclobacillus pomorum DSM 14955 0 0 0 5 0 6 0 67889 67900 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus similis;t__Lactobacillus similis DSM 23365 = JCM 2765 0 0 1 1 0 107 0 68635 68744 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;t__Halomonas boliviensis LC1 0 10 6 0 0 88 0 82433 82537 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Pusillimonas;s__Pusillimonas noertemannii;t__Pusillimonas noertemannii BS8 0 1 2 7 20 0 0 78081 78111 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia parkeri;t__Borrelia parkeri SLO 0 0 0 0 0 0 0 2539 2577 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga profunda;t__Thermotoga profunda AZM34c06 0 0 0 1 12 1 0 43738 43752 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter valericigenes;t__Oscillibacter valericigenes Sjm18-20 0 0 0 0 0 0 0 1211 1211 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Salinicoccus;s__Salinicoccus halodurans;t__ 2 0 19 136 161 131 0 55118 55567 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas thermotolerans;t__Pseudomonas thermotolerans DSM 14292 0 15 7 0 2 208 0 74601 74833 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Listeria phage LMSP-25;t__ 0 0 0 0 727 0 0 2033 2760 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Pseudothermotoga;s__Pseudothermotoga thermarum;t__Pseudothermotoga thermarum DSM 5069 0 0 0 0 2 0 0 40796 40798 k__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanothermobacter;s__Methanothermobacter thermautotrophicus;t__Methanothermobacter thermautotrophicus str. Delta H 0 0 0 0 2 0 0 35025 35027 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiETA2;t__ 0 0 0 0 42 560 0 263 865 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus;s__Ruminococcus champanellensis;t__Ruminococcus champanellensis 18P13 = JCM 17042 0 1 0 0 0 15 0 50076 50092 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces suimastitidis;t__Actinomyces suimastitidis DSM 15538 4 1 6 0 1 0 0 45809 45821 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Listeriaceae;g__Listeria;s__Listeria monocytogenes;t__Listeria monocytogenes EGD-e 1 5 26 75 0 652 0 58131 58890 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P100virus;s__Listeria virus P100;t__Listeria phage LP-125 0 0 0 0 670 310 0 1725 2705 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Microcoleus;s__Microcoleus sp. PCC 7113;t__ 0 0 0 0 0 0 0 9558 9907 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Eubacteriaceae;g__Eubacterium;s__Eubacterium sp. ER2;t__ 46 232 1 1195 0 1 0 63732 65207 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Candidatus Puniceispirillum;s__Candidatus Puniceispirillum marinum;t__Candidatus Puniceispirillum marinum IMCC1322 0 0 14 0 0 0 0 55056 55070 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mucosae;t__Lactobacillus mucosae LM1 63 42 17 12 7 236 0 46148 46525 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas zincidurans;t__Halomonas zincidurans B6 0 103 52 9 7 38 0 70884 71093 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Filomicrobium;s__Candidatus Filomicrobium marinum;t__ 0 1 0 1 4 0 0 79392 79398 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Candidatus Profftella;s__Candidatus Profftella armatura;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage Phi12;t__ 0 0 0 0 130 393 0 376 899 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Subdoligranulum;s__Subdoligranulum variabile;t__Subdoligranulum variabile DSM 15176 18 14 0 651 306 0 0 63576 64584 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconobacter;s__Gluconobacter oxydans;t__Gluconobacter oxydans H24 0 0 0 0 0 0 0 4172 4276 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 80;t__ 13 0 0 0 61 750 0 18 842 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassospira;s__Thalassospira australica;t__ 0 0 5 0 0 35 0 85308 85348 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caballeronia;s__Caballeronia udeis;t__ 0 5 4 10 575 14 0 199969 200577 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas salina;t__ 0 0 20 0 25 122 0 81554 81721 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteriaceae bacterium TAA166;t__ 0 0 0 0 21 5 0 122709 122735 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella tanakaei;t__Collinsella tanakaei YIT 12063 130 1 1 0 1 21 0 49411 49565 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfotalea;s__Desulfotalea psychrophila;t__Desulfotalea psychrophila LSv54 0 0 0 0 0 0 0 2722 2723 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Enterorhabdus;s__Enterorhabdus caecimuris;t__Enterorhabdus caecimuris B7 0 0 1 0 15 1 0 58819 58836 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella trematum;t__ 0 2 6 30 132 0 0 89432 89602 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Marinococcus;s__Marinococcus halotolerans;t__Marinococcus halotolerans DSM 16375 0 0 0 0 0 0 0 62690 62690 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Silvibacterium;s__Silvibacterium bohemicum;t__ 1 0 0 0 0 0 0 129099 129100 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella sp. 109;t__ 0 1 0 0 0 0 0 75601 75602 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus apinorum;t__ 0 0 1 1 2 11 0 28489 28504 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax radicis;t__Acidovorax radicis N35 0 1 0 18 48 0 0 110483 110550 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp. ALJ24;t__ 0 1 3 0 2 234 0 55956 56196 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Fructobacillus;s__Fructobacillus pseudoficulneus;t__ 0 0 2 0 0 0 0 28233 28235 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Acidithrix;s__Acidithrix ferrooxidans;t__ 0 0 0 0 0 0 0 80058 80058 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Thermoproteus;s__Thermoproteus tenax;t__Thermoproteus tenax Kra 1 0 0 0 0 0 0 0 36830 36830 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella viridescens;t__ 0 0 2 4 1 12 0 30467 30486 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium aquaticum;t__ 1 0 0 2 0 0 0 147535 147538 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella sediminis;t__Shewanella sediminis HAW-EB3 0 1 79 38 0 756 0 109479 110353 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter daepoensis;t__Marinobacter daepoensis DSM 16072 0 0 8 2 0 75 0 76479 76564 k__Viruses;p__dsDNA viruses, no RNA stage;c__Bicaudaviridae;o__;f__;g__Bicaudavirus;s__Acidianus two-tailed virus;t__ 0 0 0 0 0 0 0 1254 1254 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. Root651;t__ 0 1 170 9 445 28 0 115376 116029 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium breve;t__Bifidobacterium breve DSM 20213 = JCM 1192 0 0 0 0 1 279 0 45108 45388 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan House Fly Virus 1;t__ 0 0 0 0 0 0 0 253 253 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinobacterium;s__Marinobacterium sp. AK27;t__ 8 13 13 1 1 8 0 90895 90939 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptostreptococcus;s__Peptostreptococcus stomatis;t__Peptostreptococcus stomatis DSM 17678 14 20 0 121 122 1 0 39346 39624 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella micans;t__Prevotella micans DSM 21469 = JCM 16134 0 0 0 222 10 495 0 47607 48334 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__;s__Lachnospiraceae bacterium AC2014;t__ 0 1 0 9 45 17 0 55052 55124 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter sp. KLE 1745;t__ 3 0 0 587 0 0 0 70472 71062 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax jadensis;t__Alcanivorax jadensis T9 0 31 36 5 0 304 0 72153 72529 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio cholerae;t__Vibrio cholerae O1 0 0 39 0 29 295 0 80297 80667 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus A;t__ 0 0 0 0 0 0 0 682 682 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus A;t__ 0 0 0 0 0 0 0 682 682 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__;s__Plautia stali symbiont;t__ 0 0 0 0 0 0 0 1087 1145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage 118970_sal4;t__ 0 0 0 29 534 0 0 285 848 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-32;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 9;t__ 0 0 0 0 0 0 0 259 259 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Spirochaeta;s__Spirochaeta thermophila;t__Spirochaeta thermophila DSM 6578 1 0 0 0 0 1 0 51202 51204 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thiorhodospira;s__Thiorhodospira sibirica;t__Thiorhodospira sibirica ATCC 700588 0 0 5 1 6 0 0 63424 63436 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter;s__Acinetobacter ursingii;t__Acinetobacter ursingii DSM 16037 = CIP 107286 11 55 8 0 6 2066 0 67533 69679 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermodesulfobiaceae;g__Coprothermobacter;s__Coprothermobacter platensis;t__Coprothermobacter platensis DSM 11748 0 0 0 0 0 0 0 28272 28272 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus pettenkoferi;t__Staphylococcus pettenkoferi VCU012 1 4 0 3 1 330 0 48524 48882 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Mamestra configurata nucleopolyhedrovirus B;t__ 0 0 0 0 1 0 0 3168 3169 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella sp. phage 1/4;t__ 0 0 0 0 0 0 0 2676 2676 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium pseudotuberculosis;t__Corynebacterium pseudotuberculosis C231 0 0 5 11 0 77 0 46471 46564 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas spadix;t__Pseudoxanthomonas spadix BD-a59 0 0 3 1 218 13 0 68816 69051 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cotton leaf curl Multan alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium SIT11;t__ 2 1093 0 2 21 0 0 34122 35240 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family IV. Incertae Sedis;g__Mahella;s__Mahella australiensis;t__Mahella australiensis 50-1 BON 8 0 170 188 0 0 0 62353 62719 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Ornithinibacillus;s__Ornithinibacillus californiensis;t__ 0 1 1 0 8 408 0 79051 79469 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. ARR65;t__ 0 0 0 2 6 44 0 171944 171996 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Nautella;s__Nautella italica;t__ 106 0 0 0 695 0 0 80124 80925 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Equid alphaherpesvirus 9;t__ 0 0 0 0 0 0 0 2967 2967 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax mediterranei;t__Haloferax mediterranei ATCC 33500 0 0 0 0 0 0 0 19090 19112 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Maritalea;s__Maritalea myrionectae;t__Maritalea myrionectae DSM 19524 0 0 3 5 8 0 0 70752 70768 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiothrix;s__Thiothrix disciformis;t__Thiothrix disciformis DSM 14473 0 0 9 1 0 1 0 78339 78350 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Sporosarcina;s__Sporosarcina ureae;t__Sporosarcina ureae DSM 2281 0 0 0 1 0 0 0 66299 66300 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Variovorax;s__Variovorax sp. URHB0020;t__ 0 1 2 31 184 40 0 132244 132502 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Achromobacter;s__Achromobacter xylosoxidans;t__ 15 62 0 159 58 73 0 135896 136263 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Thermus phage phiYS40;t__ 0 0 0 0 0 0 0 3047 3047 k__Bacteria;p__Gemmatimonadetes;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas phototrophica;t__ 2 0 0 0 0 35 0 94294 94331 k__BacteriaPlasmid;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma melliferum;t__Spiroplasma melliferum KC3 0 0 0 0 0 0 0 753 753 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium glucuronolyticum;t__Corynebacterium glucuronolyticum ATCC 51867 20 32 13 0 0 60 0 55375 55500 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylotenera;s__Methylotenera mobilis;t__Methylotenera mobilis JLW8 0 0 6 4 54 0 0 50887 50951 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Shigella;s__Shigella dysenteriae;t__Shigella dysenteriae Sd197 0 0 0 0 5 0 0 3268 3831 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Sulfuricellales;f__Sulfuricellaceae;g__Sulfuricella;s__Sulfuricella denitrificans;t__Sulfuricella denitrificans skB26 0 0 0 0 0 0 0 1732 1732 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus ruber;t__Meiothermus ruber DSM 1279 0 0 0 0 5 315 0 61654 61974 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Se1virus;s__Cronobacter virus GAP31;t__Cronobacter phage vB_CsaM_GAP31 0 0 0 0 0 0 0 2958 2958 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus sp. SJ5A-1;t__ 0 0 0 0 18 0 0 91019 91037 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thuringiensis;t__ 0 0 0 0 0 0 0 9842 11062 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter subterrani;t__ 0 0 88 0 0 316 0 88666 89070 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium fabrum;t__Agrobacterium fabrum str. C58 0 0 0 0 0 825 0 13598 15140 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus onnurineus;t__Thermococcus onnurineus NA1 0 0 0 0 0 41 0 36911 36952 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas veronii;t__ 0 0 104 0 0 0 0 98356 98460 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Franconibacter;s__Franconibacter pulveris;t__Franconibacter pulveris DSM 19144 0 0 3 23 106 0 0 93854 93986 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas mendocina;t__Pseudomonas mendocina ymp 0 0 19 0 0 458 0 100979 101456 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Citromicrobium;s__Citromicrobium sp. JLT1363;t__ 0 0 1 19 6 0 0 62268 62297 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus sibiricus;t__Thermococcus sibiricus MM 739 0 0 0 0 3 6 0 36906 36915 k__Bacteria;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus pacaensis;t__Anaerococcus pacaensis 9403502 0 88 0 0 2 0 0 46205 46295 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Thiohalorhabdus;s__Thiohalorhabdus denitrificans;t__ 0 0 0 0 0 0 0 57353 57353 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Balneatrix;s__Balneatrix alpica;t__Balneatrix alpica DSM 16621 0 0 13 0 3 0 0 72962 72978 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Malakal virus;t__ 0 0 0 0 0 0 0 308 308 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aliiroseovarius;s__Aliiroseovarius crassostreae;t__ 0 1 4 0 132 0 0 73954 74091 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Lymantria xylina MNPV;t__ 0 0 0 0 0 36 0 3090 3126 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Polycyclovorans;s__Polycyclovorans algicola;t__Polycyclovorans algicola TG408 0 0 6 0 4 0 0 73054 73064 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Microvirgula;s__Microvirgula aerodenitrificans;t__Microvirgula aerodenitrificans DSM 15089 0 2 6 1 11 0 0 80596 80616 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina loihiensis;t__Idiomarina loihiensis L2TR 0 33 78 27 0 564 0 56084 56786 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus;s__Acidaminococcus intestini;t__Acidaminococcus intestini RyC-MR95 0 232 5 0 70 52 0 49396 49755 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Phyllobacterium;s__Phyllobacterium sp. YR531;t__ 0 0 0 37 2 9 0 99825 99873 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Pontibacter;s__Pontibacter roseus;t__Pontibacter roseus DSM 17521 0 0 0 0 2 79 0 91500 91581 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter donghicola;t__Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 0 0 2 0 68 0 0 70718 70788 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc sp. PCC 7120;t__ 0 0 0 0 0 0 0 15555 15951 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Labrenzia;s__Labrenzia alexandrii;t__Labrenzia alexandrii DFL-11 0 0 18 0 27 69 0 109045 109159 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas shioyasakiensis;t__ 0 0 11 0 0 75 0 95978 96064 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus diolivorans;t__Lactobacillus diolivorans DSM 14421 0 0 1 1 17 629 0 64330 64978 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Marinobacterium;s__Marinobacterium jannaschii;t__Marinobacterium jannaschii DSM 6295 0 0 0 0 0 0 0 103391 103391 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Cercopithecine alphaherpesvirus 2;t__ 0 0 0 0 0 0 0 3014 3014 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Variovorax;s__Variovorax paradoxus;t__Variovorax paradoxus EPS 0 0 1 12 88 0 0 130900 131001 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas saudiphocaensis;t__ 1 16 76 0 1 297 0 73084 73475 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Robiginitomaculum;s__Robiginitomaculum antarcticum;t__Robiginitomaculum antarcticum DSM 21748 0 0 2 0 1 0 0 55364 55367 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter metallireducens;t__Geobacter metallireducens GS-15 1 1 1 4 0 30 0 79911 79948 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter gracilis;t__ 0 0 0 0 3 0 0 45630 45633 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__;s__Rhodobacteraceae bacterium HTCC2083;t__ 0 0 0 0 85 2 0 80192 80279 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris BisB18 0 0 0 4 41 0 324 109907 110276 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus ferus;t__Streptococcus ferus DSM 20646 0 0 0 4 0 26 0 36888 36918 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Solemya velum gill symbiont;t__ 0 1 100 0 3 0 0 53925 54029 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium vaginae;t__Atopobium vaginae PB189-T1-4 1 0 0 0 0 4 35 28887 28927 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Anaplasma;s__Anaplasma phagocytophilum;t__Anaplasma phagocytophilum str. HZ 0 0 0 0 1 0 0 29424 29425 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanoregulaceae;g__Methanosphaerula;s__Methanosphaerula palustris;t__Methanosphaerula palustris E1-9c 0 0 0 9 0 0 0 58449 58458 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium pseudolongum;t__Bifidobacterium pseudolongum PV8-2 7 0 0 0 0 130 0 40516 40653 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hominis;t__Lactobacillus hominis DSM 23910 = CRBIP 24.179 1 0 0 0 0 91 0 38405 38498 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Spiribacter;s__Spiribacter salinus;t__Spiribacter salinus M19-40 0 0 0 1 0 11 0 34777 34789 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Puniceibacterium;s__Puniceibacterium sp. IMCC21224;t__ 0 0 0 0 1787 0 0 109467 111254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Trichoplusia ni single nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2686 2686 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Mythimna unipuncta granulovirus;t__ 0 0 0 0 0 0 0 2890 2890 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sphaerophysae;t__ 1 0 11 0 21 49 0 66834 66916 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sediminimonas;s__Sediminimonas qiaohouensis;t__Sediminimonas qiaohouensis DSM 21189 0 0 0 0 102 0 0 70852 70954 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudodonghicola;s__Pseudodonghicola xiamenensis;t__Pseudodonghicola xiamenensis DSM 18339 0 0 3 0 1714 0 0 92648 94365 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Pseudacidovorax;s__Pseudacidovorax intermedius;t__ 0 1 0 3 14 0 0 110345 110363 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas composti;t__Comamonas composti DSM 21721 0 1 0 43 29 26 0 92411 92510 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium fredii;t__Sinorhizobium fredii NGR234 0 0 0 1 1 31 0 57798 59322 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira sp. PHS-1;t__ 0 0 0 0 0 0 0 58648 58648 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Dechloromonas;s__Dechloromonas aromatica;t__Dechloromonas aromatica RCB 0 2 28 0 41 2 0 89949 90022 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sulfidiphilus;t__Thioalkalivibrio sulfidiphilus HL-EbGr7 0 18 73 0 0 5 0 69195 69291 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Candidatus Desulforudis;s__Candidatus Desulforudis audaxviator;t__Candidatus Desulforudis audaxviator MP104C 0 1 1 0 0 0 0 46987 46989 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconobacter;s__Gluconobacter oxydans;t__Gluconobacter oxydans 621H 0 0 25 0 458 12 106 53442 54043 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Chromohalobacter;s__Chromohalobacter japonicus;t__ 0 0 66 0 135 238 0 67038 67477 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Yersinia phage L-413C;t__ 0 0 0 0 0 0 0 614 614 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter lipolyticus;t__Marinobacter lipolyticus SM19 0 0 11 0 0 52 0 80184 80247 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf231;t__ 0 0 1 2 2 81 0 74565 74651 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Xylophilus;s__Xylophilus sp. Leaf220;t__ 0 0 0 49 4 0 0 89565 89618 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter arseniciresistens;t__Lysobacter arseniciresistens ZS79 22 2 2 1 49 15 0 61429 61520 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Achromobacter;s__Achromobacter sp. DMS1;t__ 0 0 0 100 14 0 0 97543 97657 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. WH 8102;t__ 0 0 3 22 0 82 0 48581 48688 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis taiwanensis;t__Amycolatopsis taiwanensis DSM 45107 0 0 4 0 3 0 0 174899 174906 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus islandicus;t__Thermus islandicus DSM 21543 0 0 2 0 0 189 0 44946 45137 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp. HK1;t__ 0 0 0 0 0 0 0 68991 68991 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter luteus;t__ 0 0 1 6 3 32 0 57662 57704 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax sp. Leaf160;t__ 0 1 0 8 68 81 0 94147 94305 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Amantichitinum;s__Amantichitinum ursilacus;t__ 0 0 6 6 0 0 0 98498 98510 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus acidocaldarius;t__Alicyclobacillus acidocaldarius subsp. acidocaldarius 3 1 0 1 0 0 0 60370 60375 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Pseudopropionibacterium;s__Pseudopropionibacterium propionicum;t__Pseudopropionibacterium propionicum F0230a 0 0 93 0 10 0 0 68884 68987 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter concretionis;t__Lysobacter concretionis Ko07 = DSM 16239 0 19 1 0 24 35 0 60516 60595 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas resinovorans;t__Pseudomonas resinovorans NBRC 106553 0 0 0 0 0 0 0 3787 3979 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Hiyo1;t__ 2 0 2 7 53 12 0 84665 84741 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina sp. A28L;t__ 0 1 6 7 0 1 0 51763 51778 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus hesperidum;t__Alicyclobacillus hesperidum URH17-3-68 1 1 0 3 0 47 0 59142 59194 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp. 217;t__ 0 0 1 0 62 77 0 95045 95185 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter alkaliphilus;t__Maritimibacter alkaliphilus HTCC2654 0 0 0 0 119 0 0 90381 90500 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus concavus;t__Lactobacillus concavus DSM 17758 0 1 3 78 15 353 0 37275 37734 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis baekryungensis;t__Sphingopyxis baekryungensis DSM 16222 0 0 3 19 6 7 0 61312 61347 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylobacillus;s__Methylobacillus glycogenes;t__Methylobacillus glycogenes JCM 2850 0 0 4 0 24 14 0 64887 64929 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Rhodoferax;s__Rhodoferax ferrireducens;t__Rhodoferax ferrireducens T118 0 1 0 12 55 0 0 94178 94246 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia phymatum;t__Paraburkholderia phymatum STM815 0 2 7 22 139 134 0 123225 123529 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Cryptosporangiaceae;g__Cryptosporangium;s__Cryptosporangium arvum;t__Cryptosporangium arvum DSM 44712 0 0 40 6 0 0 0 183858 183904 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp. Rr 2-17;t__ 0 1 0 12 8 28 0 90421 90470 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter orientalis;t__Acetobacter orientalis 21F-2 0 0 1 0 25 55 0 58006 58087 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter fulvus;t__Rhodanobacter fulvus Jip2 13 1 2 7 25 45 0 77246 77339 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas stutzeri;t__ 1 0 17 0 2 249 0 94354 94623 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Hydrogenophaga;s__Hydrogenophaga sp. RAC07;t__ 0 2 5 23 58 9 0 93396 93493 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sharpeae;t__Lactobacillus sharpeae JCM 1186 = DSM 20505 0 2 1 27 1 49 0 48686 48766 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Lachnoclostridium;s__[Clostridium] aminophilum;t__[Clostridium] aminophilum DSM 10710 11 0 0 91 21 1 0 62089 62213 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Aminomonas;s__Aminomonas paucivorans;t__Aminomonas paucivorans DSM 12260 1 0 0 0 12 0 0 52586 52599 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Candidatus Burkholderia crenata;t__ 7 1 0 3 11 19 0 52019 52065 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Oceanithermus;s__Oceanithermus profundus;t__Oceanithermus profundus DSM 14977 1 0 2 0 6 0 0 46069 46078 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Candidatus Glomeribacter;s__Candidatus Glomeribacter gigasporarum;t__Candidatus Glomeribacter gigasporarum BEG34 0 0 0 2 0 0 0 34276 34278 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruthenibacterium;s__Ruthenibacterium lactatiformans;t__ 6 0 0 287 183 0 0 78353 78829 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Gallaecimonas;s__Gallaecimonas xiamenensis;t__Gallaecimonas xiamenensis 3-C-1 0 0 16 0 0 0 0 81105 81121 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. RS9916;t__ 0 0 3 24 0 0 0 53256 53283 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas flexibilis;t__ 0 3 8 1 1 49 0 74876 74938 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__;s__Rhodocyclaceae bacterium Paddy-1;t__ 0 9 112 0 28 0 0 70815 70964 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aureimonas;s__Aureimonas ureilytica;t__Aureimonas ureilytica DSM 18598 = NBRC 106430 0 0 1 0 0 0 64 101588 101653 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Saccharibacter;s__Saccharibacter sp. AM169;t__ 0 4 1 0 24 0 0 39517 39546 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas lutea;t__Halomonas lutea DSM 23508 30 39 6 0 8 9 0 90455 90547 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp.;t__ 0 0 0 1 0 122 0 150824 150947 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Magnetospirillum;s__Magnetospirillum gryphiswaldense;t__Magnetospirillum gryphiswaldense MSR-1 0 1 7 2 4 20 0 87281 87315 k__Bacteria;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Acidithiobacillus;s__Acidithiobacillus ferrivorans;t__Acidithiobacillus ferrivorans SS3 0 7 0 0 0 0 0 64144 64151 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium pyruviciproducens;t__Corynebacterium pyruviciproducens ATCC BAA-1742 0 0 4 2 0 489 0 53548 54043 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus pontis;t__Lactobacillus pontis DSM 8475 0 0 2 2 1 102 0 32984 33091 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter pasteurianus;t__Acetobacter pasteurianus subsp. pasteurianus 0 2 4 0 113 119 0 57911 58149 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus animalis;t__Lactobacillus animalis KCTC 3501 = DSM 20602 2 22 2 47 1 27 0 37371 37472 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. Leaf344;t__ 0 0 1 17 1 63 0 86652 86734 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. AA22;t__ 0 0 0 15 0 0 0 161528 161543 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Magnetospirillum;s__Magnetospirillum magneticum;t__Magnetospirillum magneticum AMB-1 0 2 3 4 0 0 0 99301 99340 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium meliloti;t__Sinorhizobium meliloti 1021 0 0 0 0 0 122 0 60060 60747 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Perlucidibaca;s__Perlucidibaca piscinae;t__Perlucidibaca piscinae DSM 21586 0 2 7 0 3 0 0 48447 48459 k__Bacteria;p__Chloroflexi;c__Ardenticatenia;o__Ardenticatenales;f__Ardenticatenaceae;g__Ardenticatena;s__Ardenticatena maritima;t__ 0 0 0 0 0 0 0 70518 70518 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Pseudogulbenkiania;s__Pseudogulbenkiania ferrooxidans;t__Pseudogulbenkiania ferrooxidans 2002 0 0 13 6 33 0 0 84477 84529 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Aromatoleum;s__Aromatoleum aromaticum;t__Aromatoleum aromaticum EbN1 0 0 0 0 0 0 0 8202 8618 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus peraridilitoris;t__Deinococcus peraridilitoris DSM 19664 1 0 0 0 0 21 0 77614 77636 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Hoeflea;s__Hoeflea sp. BAL378;t__ 0 0 2 27 5 21 0 109079 109134 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium larrymoorei;t__Rhizobium larrymoorei ATCC 51759 0 0 0 5 27 41 0 103044 103117 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Cellvibrionaceae;g__Marinimicrobium;s__Marinimicrobium sp. LS-A18;t__ 0 0 3 5 5 0 0 76264 76277 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Halieaceae;g__Pseudohaliea;s__Pseudohaliea rubra;t__Pseudohaliea rubra DSM 19751 0 0 3 5 4 0 0 64057 64069 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconobacter;s__Gluconobacter oxydans;t__Gluconobacter oxydans H24 2 0 1 0 98 0 0 71947 72048 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] leptum;t__[Clostridium] leptum DSM 753 142 0 0 282 8 5 0 64925 65362 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium leprae;t__Mycobacterium leprae TN 0 0 0 3 0 22 0 65339 65364 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas saudimassiliensis;t__ 7 0 16 0 0 0 0 66820 66843 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinovum;s__Marinovum algicola;t__Marinovum algicola DG 898 0 0 1 0 94 0 0 74447 74542 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Butyricicoccus;s__Butyricicoccus pullicaecorum;t__Butyricicoccus pullicaecorum 1.2 9 136 240 553 76 24 0 64922 65960 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Sutterellaceae;g__Dakarella;s__Dakarella massiliensis;t__ 0 0 0 8 0 0 0 49518 49526 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium pentaromativorans;t__Novosphingobium pentaromativorans US6-1 0 0 3 390 388 293 0 78516 79590 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas jaspsi;t__Sphingomonas jaspsi DSM 18422 1 0 1 3 3 5 0 50941 50954 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Euryhalocaulis;s__Euryhalocaulis caribicus;t__ 0 0 3 0 0 0 0 66388 66391 k__Bacteria;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Acidithiobacillus;s__Acidithiobacillus caldus;t__Acidithiobacillus caldus ATCC 51756 0 78 0 0 0 25 0 55449 55552 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma agalactiae;t__Mycoplasma agalactiae PG2 0 0 0 0 0 12 0 17536 17548 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Oceanobacter;s__Oceanobacter kriegii;t__Oceanobacter kriegii DSM 6294 0 0 0 0 0 0 0 90010 90010 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria nigro-viridis;t__Oscillatoria nigro-viridis PCC 7112 0 0 0 0 0 0 0 14998 15857 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas salmonicida;t__Aeromonas salmonicida subsp. salmonicida 0 3 101 0 0 668 0 93276 94048 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Paeniglutamicibacter;s__Paeniglutamicibacter gangotriensis;t__Paeniglutamicibacter gangotriensis Lz1y 3 0 2 12 16 0 0 86326 86359 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Buzura suppressaria nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2408 2408 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter castelli;t__Arthrobacter castelli DSM 16402 0 0 5 1 13 0 0 91533 91552 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Knoellia;s__Knoellia aerolata;t__Knoellia aerolata DSM 18566 16 0 37 18 13 1 0 81237 81322 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium epidermidicanis;t__ 0 0 14 16 0 139 0 53672 53841 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylocystis;s__Methylocystis sp. ATCC 49242;t__ 0 2 4 16 0 3 0 94482 94507 k__Bacteria;p__Verrucomicrobia;c__;o__;f__;g__;s__Verrucomicrobia bacterium IMCC26134;t__ 0 0 0 0 0 0 0 80019 80019 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Acaricomes;s__Acaricomes phytoseiuli;t__Acaricomes phytoseiuli DSM 14247 3 0 4 6 26 0 0 48234 48273 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Thysanoplusia orichalcea nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2659 2659 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Dethiosulfovibrio;s__Dethiosulfovibrio peptidovorans;t__Dethiosulfovibrio peptidovorans DSM 11002 4 0 0 0 4 0 0 51515 51523 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cba181virus;s__Cellulophaga virus Cba181;t__Cellulophaga phage phi18:1 0 0 0 0 0 30 0 753 783 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas campestris;t__Xanthomonas campestris pv. campestris 0 0 1 0 102 587 0 100828 101519 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Slackia;s__Slackia exigua;t__Slackia exigua ATCC 700122 0 0 14 0 0 0 0 41843 41857 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus smithii;t__ 0 0 0 0 0 0 0 182 250 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Verminephrobacter;s__Verminephrobacter aporrectodeae;t__Verminephrobacter aporrectodeae subsp. tuberculatae 0 0 0 5 8 0 0 91581 91594 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Propionibacterium;s__Propionibacterium sp. oral taxon 192;t__Propionibacterium sp. oral taxon 192 str. F0372 0 0 156 0 27 0 0 53873 54056 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Aminobacterium;s__Aminobacterium colombiense;t__Aminobacterium colombiense DSM 12261 1 0 0 0 3 4 0 39603 39611 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Thiomicrospira;s__Thiomicrospira pelophila;t__Thiomicrospira pelophila DSM 1534 0 0 12 0 46 8 0 42098 42164 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Slackia;s__Slackia piriformis;t__Slackia piriformis YIT 12062 0 0 35 0 26 2 0 41920 41983 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobius;s__Thalassobius gelatinovorus;t__ 51 0 0 0 121 4 0 77823 77999 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methyloferula;s__Methyloferula stellata;t__Methyloferula stellata AR4 0 0 1 8 0 0 0 84699 84708 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage SfV;t__ 0 0 0 0 0 0 0 741 741 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium tardaugens;t__Novosphingobium tardaugens NBRC 16725 0 0 1 20 654 6 0 85047 85728 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella sp. 1ANDIMAR09;t__ 0 0 0 0 124 24 0 74203 74351 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter aquimaris;t__ 0 0 0 0 12 1 0 76214 76227 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella ceti;t__ 0 0 10 21 2 83 0 27691 27807 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis sp. NRRL B-16309;t__ 0 0 4 0 0 165 0 133662 133831 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Candidatus Rhodobacter lobularis;t__ 0 0 0 0 1 0 0 100680 100681 k__Bacteria;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Rhodopirellula;s__Rhodopirellula baltica;t__Rhodopirellula baltica SH 1 3 0 0 0 0 150 0 142758 142911 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__;s__Rhodobacteraceae bacterium PD-2;t__ 12 48 0 0 53 0 0 103617 103730 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Metallosphaera;s__Metallosphaera yellowstonensis;t__Metallosphaera yellowstonensis MK1 0 0 0 0 108 12 0 55808 55928 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus ALH8;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage B054;t__ 0 0 0 0 0 0 0 963 963 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter sp. ES-1;t__ 0 5 193 3 0 527 0 70245 70973 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage 2389;t__ 0 0 0 0 0 8 0 744 752 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium yanoikuyae;t__Sphingobium yanoikuyae ATCC 51230 0 0 1 42 1579 121 0 108218 109961 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum tebenquichense;t__Halorubrum tebenquichense DSM 14210 0 0 90 0 0 0 0 66309 66399 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus coleohominis;t__Lactobacillus coleohominis 101-4-CHN 0 0 3 0 0 136 0 33890 34029 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia sp. LC5;t__ 0 0 2 3 2 77 0 83886 83970 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Acetomicrobium;s__Acetomicrobium mobile;t__Acetomicrobium mobile DSM 13181 0 0 0 0 0 163 0 43050 43213 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus thioreducens;t__ 0 0 0 0 17 164 0 40791 40972 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia putida;t__ 0 0 0 0 0 0 0 10568 10705 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanoculleus;s__Methanoculleus sediminis;t__ 0 0 0 0 0 1 0 49711 49712 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage phiP27;t__ 0 0 0 1 0 0 0 850 851 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Dendrolimus punctatus cypovirus 22;t__ 0 0 0 0 0 0 0 626 626 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia billingiae;t__Erwinia billingiae Eb661 0 0 0 0 0 0 0 5228 5440 k__Archaea;p__Candidatus Korarchaeota;c__;o__;f__;g__Candidatus Korarchaeum;s__Candidatus Korarchaeum cryptofilum;t__Candidatus Korarchaeum cryptofilum OPF8 0 0 0 0 0 0 0 31815 31815 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus apachensis;t__Deinococcus apachensis DSM 19763 25 0 0 0 0 11 0 88834 88870 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Volepox virus;t__ 0 0 0 0 0 44 0 4298 4342 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda;s__Centipeda periodontii;t__Centipeda periodontii DSM 2778 3 1 0 0 2 0 0 54175 54186 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Huangpi Tick Virus 3;t__ 0 0 0 0 0 0 0 263 263 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Turneriella;s__Turneriella parva;t__Turneriella parva DSM 21527 0 0 0 0 0 0 0 505 505 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas bovis;t__Selenomonas bovis DSM 23594 8 97 37 0 0 1 0 53379 53522 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Thauera;s__Thauera sp. 28;t__ 0 3 12 0 46 1 0 85997 86059 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas azotifigens;t__Pseudomonas azotifigens DSM 17556 0 10 31 0 1 864 0 98854 99760 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium;s__Neorhizobium galegae;t__Neorhizobium galegae bv. orientalis 0 1 2 17 89 0 0 128989 129098 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia pseudomallei;t__Burkholderia pseudomallei K96243 0 4 4 17 15 299 0 144200 144949 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Thermanaerovibrio;s__Thermanaerovibrio velox;t__Thermanaerovibrio velox DSM 12556 3 0 0 0 13 0 0 37596 37612 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas acidaminiphila;t__ 0 247 60 1 1464 204 0 80789 82765 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas protegens;t__Pseudomonas protegens CHA0 1 9 12 0 0 411 0 136926 137359 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium medicae;t__Sinorhizobium medicae WSM419 0 0 0 16 38 127 0 75457 75638 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Mocis sp. granulovirus;t__ 0 0 0 0 0 0 0 2685 2685 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Renibacterium;s__Renibacterium salmoninarum;t__Renibacterium salmoninarum ATCC 33209 1 0 9 6 27 0 0 63061 63104 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Nitratireductor;s__Nitratireductor aquibiodomus;t__Nitratireductor aquibiodomus NL21 = JCM 21793 0 0 1 20 3 14 0 89905 89943 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Thermocrinis;s__Thermocrinis ruber;t__ 0 0 0 0 7 6 0 30407 30420 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Methyloversatilis;s__Methyloversatilis discipulorum;t__ 0 1 20 0 8 0 0 86101 86130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage DW2;t__ 0 0 0 0 101 100 0 637 838 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Tacaribe mammarenavirus;t__ 0 0 0 0 0 0 0 208 208 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella dentasini;t__Prevotella dentasini JCM 15908 7 0 0 12 0 133 0 50705 50857 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia riboflavina;t__ 0 0 2 0 1 61 0 100768 100833 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylothermaceae;g__Methylohalobius;s__Methylohalobius crimeensis;t__Methylohalobius crimeensis 10Ki 0 0 2 1 0 0 0 70180 70183 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella ruminicola;t__Prevotella ruminicola 23 0 4 0 1 0 65 0 72321 72391 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter geojensis;t__ 0 0 0 0 121 12 0 84448 84581 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Oceanospirillaceae;g__Nitrincola;s__Nitrincola lacisaponensis;t__ 0 1 5 1 0 0 0 68156 68163 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Frateuria;s__Frateuria aurantia;t__Frateuria aurantia DSM 6220 0 0 12 32 65 0 0 71960 72069 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus versutus;t__ 0 0 312 0 4 0 0 109350 109666 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter salarius;t__ 0 1 39 2 0 160 0 92128 92330 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Curvibacter;s__Curvibacter lanceolatus;t__Curvibacter lanceolatus ATCC 14669 0 9 9 22 93 0 0 136371 136504 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__gamma proteobacterium NOR5-3;t__ 3 2 55 0 0 0 0 83961 84021 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus metallidurans;t__Cupriavidus metallidurans CH34 0 12 61 1788 199 164 0 127937 130161 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella sp. S4079;t__ 0 0 1 0 21 0 0 71052 71074 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Mn802worker;t__ 0 0 2 1 2 25 0 63642 63672 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Meganema;s__Meganema perideroedes;t__Meganema perideroedes DSM 15528 0 0 0 1 0 0 0 68138 68139 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Methylibium;s__Methylibium sp. CF059;t__ 0 2 6 13 24 0 0 136691 136736 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter ruminantium;t__Oscillibacter ruminantium GH1 0 0 0 3 0 0 0 61464 61467 k__Bacteria;p__Armatimonadetes;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__Fimbriimonas;s__Fimbriimonas ginsengisoli;t__Fimbriimonas ginsengisoli Gsoil 348 1 0 0 0 0 0 0 104634 104635 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicibacter;s__Tropicibacter multivorans;t__ 40 0 0 0 168 0 0 83222 83430 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Neisseriaceae;g__Neisseria;s__Neisseria shayeganii;t__Neisseria shayeganii 871 0 0 0 2 0 48 0 45594 45644 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis sp. YBE204;t__ 2 43 1 0 10 57 0 82929 83042 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas donghaensis;t__Arenimonas donghaensis DSM 18148 = HO3-R19 0 0 0 4 17 0 0 59424 59448 k__BacteriaPlasmid;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Isosphaeraceae;g__Singulisphaera;s__Singulisphaera acidiphila;t__Singulisphaera acidiphila DSM 18658 0 0 0 0 0 0 0 2422 2516 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus koreensis;t__ 0 0 11 3 2 276 0 59844 60136 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio coralliilyticus;t__ 0 0 0 0 0 0 0 7615 7615 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter pontiacus;t__Sulfitobacter pontiacus 3SOLIMAR09 0 0 0 0 79 6 0 68933 69018 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Aquamicrobium;s__Aquamicrobium defluvii;t__ 0 0 1125 25 102 0 0 94113 95365 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter antibioticus;t__ 0 0 2 2 101 82 0 114876 115063 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces mobaraensis;t__Streptomyces mobaraensis NBRC 13819 = DSM 40847 0 0 7 0 1 469 0 148577 149054 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter santoriniensis;t__Marinobacter santoriniensis NKSG1 41 0 8 0 1 53 0 80486 80593 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia jiangxiensis;t__Nocardia jiangxiensis NBRC 101359 22 0 14 10 6 111 0 208429 208592 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Rhodoferax;s__Rhodoferax ferrireducens;t__Rhodoferax ferrireducens T118 0 0 0 0 0 0 0 5148 5148 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium nebraskense;t__ 0 0 7 1 0 4584 0 125868 130460 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas;s__Comamonas sp. B-9;t__ 0 38 2 1 534 8 0 102580 103163 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Skermanella;s__Skermanella aerolata;t__Skermanella aerolata KACC 11604 1 33 5 2 1 26 0 169910 169978 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Flavonifractor;s__Flavonifractor plautii;t__ 0 0 0 5 0 0 0 76364 76369 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Archangiaceae;g__Stigmatella;s__Stigmatella aurantiaca;t__Stigmatella aurantiaca DW4/3-1 0 0 0 0 0 0 0 205215 205215 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium phoceensis;t__ 0 1 0 673 4 107 0 68051 68836 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. CNQ-509;t__ 1 0 47 0 7 194 0 160537 160786 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__;s__Burkholderiales bacterium GJ-E10;t__ 0 3 2 7 0 0 0 65518 65530 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidocella;s__Acidocella facilis;t__Acidocella facilis ATCC 35904 0 0 0 0 11 148 0 67832 67991 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. URHD0057;t__ 0 0 1 3 7 5 0 55652 55668 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Methyloversatilis;s__Methyloversatilis thermotolerans;t__ 0 0 28 0 4 28 0 83140 83200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Morganella phage vB_MmoM_MP1;t__ 0 0 0 0 0 0 0 3264 3264 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibium;s__Roseibium sp. TrichSKD4;t__ 0 3 27 0 125 0 0 112965 113120 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio desulfuricans;t__Desulfovibrio desulfuricans ND132 0 0 0 3 0 15 0 77153 77171 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Methylibium;s__Methylibium petroleiphilum;t__Methylibium petroleiphilum PM1 0 0 14 94 58 0 0 80717 80883 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus gammatolerans;t__Thermococcus gammatolerans EJ3 0 0 0 0 0 0 0 40908 40908 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Shigella;s__Shigella flexneri;t__Shigella flexneri 2a 0 0 0 1 6 1201 0 2303 4432 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Phaeospirillum;s__Phaeospirillum molischianum;t__Phaeospirillum molischianum DSM 120 0 1 4 2 28 0 0 75963 75998 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 16;t__ 0 0 0 0 0 0 0 76 76 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus zilligii;t__Thermococcus zilligii AN1 0 0 0 0 0 22 0 35259 35281 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia sp. 9096;t__ 0 0 26 34 6 310 0 113827 114203 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas luteola;t__Pseudomonas luteola XLDN4-9 0 0 10 0 0 34 0 92057 92101 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Pseudoflavonifractor;s__Pseudoflavonifractor capillosus;t__Pseudoflavonifractor capillosus ATCC 29799 62 91 0 1080 102 0 0 83363 84698 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava atlantica;t__ 0 0 52 0 674 356 0 77399 78481 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Oceanicaulis;s__Oceanicaulis alexandrii;t__Oceanicaulis alexandrii DSM 11625 0 0 5 2 0 0 0 60356 60363 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium sp. Root700;t__ 0 0 2 0 12 11 0 91333 91358 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia mallei;t__Burkholderia mallei ATCC 23344 1 14 3 15 6 46231 0 70433 116708 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__;g__Halanaeroarchaeum;s__Halanaeroarchaeum sulfurireducens;t__ 0 0 5 3 0 0 0 42576 42584 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Chitinilyticum;s__Chitinilyticum litopenaei;t__Chitinilyticum litopenaei DSM 21440 0 0 10 1 3 135 0 78982 79131 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus gigeriorum;t__Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85 0 0 0 0 0 130 0 38236 38366 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas knackmussii;t__Pseudomonas knackmussii B13 7 4071 22 2 0 403 0 118753 123258 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter sp. CCS2;t__ 0 4 0 0 24 4 0 69896 69928 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Hafniaceae;g__Edwardsiella;s__Edwardsiella ictaluri;t__Edwardsiella ictaluri 93-146 2 3 45 226 6 0 0 75964 76246 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter indonesiensis;t__Acetobacter indonesiensis 5H-1 0 1 0 0 30 0 0 67962 67993 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax dieselolei;t__Alcanivorax dieselolei B5 0 8 12 4 0 23 0 98517 98564 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus curieae;t__ 0 1 9 7 4 153 0 41743 41917 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Escherichia phage phiKT;t__ 0 0 0 0 0 0 0 852 852 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus A;t__ 0 0 0 0 0 0 0 876 876 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus A;t__ 0 0 0 0 0 0 0 876 876 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Mannheimia phage vB_MhM_587AP1;t__ 0 0 0 0 0 0 0 715 715 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Sphaerotilus;s__Sphaerotilus natans;t__Sphaerotilus natans subsp. natans 0 1 2 20 28 0 0 91455 91506 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Slackia;s__Slackia heliotrinireducens;t__Slackia heliotrinireducens DSM 20476 0 0 1 0 4 2 0 63293 63300 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. JS623;t__ 0 0 0 0 0 0 0 15083 15131 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Salinibacterium;s__Salinibacterium sp. PAMC 21357;t__ 0 0 1 2 22 0 0 62151 62176 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas syringae group genomosp. 3;t__Pseudomonas syringae pv. tomato 0 0 16 0 0 223 0 127701 127942 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia fonticola;t__ 0 0 0 0 0 0 0 4496 4503 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes;s__Alistipes timonensis;t__Alistipes timonensis JC136 0 1 0 1 0 247 0 69474 69723 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. IHBB 11108;t__ 1 0 8 7 55 3 0 71840 71914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus CB14;t__ 0 0 0 0 19 88 0 482 589 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter nitratireducens;t__ 11 6 11 0 0 14 0 77718 77760 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__;s__[Polyangium] brachysporum;t__ 0 1 0 30 0 0 0 129491 129522 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hamsteri;t__Lactobacillus hamsteri DSM 5661 = JCM 6256 0 0 1 0 0 23 0 36353 36377 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium leguminosarum;t__Rhizobium leguminosarum bv. trifolii 0 1 1 14 76 201 5 96792 97090 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter vibrioides;t__ 0 0 4 0 0 0 0 106142 106146 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria halocynthiae;t__ 3 0 1 0 50 33 0 86167 86254 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Gallionellales;f__Gallionellaceae;g__Sideroxydans;s__Sideroxydans lithotrophicus;t__Sideroxydans lithotrophicus ES-1 0 0 16 0 0 0 0 60057 60073 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Beijerinckia;s__Beijerinckia indica;t__Beijerinckia indica subsp. indica 0 0 0 0 0 0 0 4967 4967 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maribius;s__Maribius sp. MOLA 401;t__ 0 0 2 0 79 0 0 76824 76905 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidiphilium;s__Acidiphilium multivorum;t__Acidiphilium multivorum AIU301 0 1 4 0 101 36 0 74846 74988 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 28201;t__ 0 0 0 0 0 39 0 648 687 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium leguminosarum;t__Rhizobium leguminosarum bv. trifolii 0 0 0 0 0 2 0 40848 40970 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Porphyrobacter;s__Porphyrobacter sp. AAP60;t__ 0 1 0 6 22 23 0 64968 65020 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Micavibrio;s__Micavibrio aeruginosavorus;t__Micavibrio aeruginosavorus ARL-13 0 0 1 0 0 0 0 49638 49639 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus virus 9872;t__ 1 0 0 0 14 243 0 404 662 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium leguminosarum;t__ 0 0 0 1 34 63 0 130101 130199 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia solanacearum;t__Ralstonia solanacearum GMI1000 0 5 4 20 54 0 0 116102 116216 k__Bacteria;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__;g__Nitratifractor;s__Nitratifractor salsuginis;t__Nitratifractor salsuginis DSM 16511 0 0 4 2 0 0 0 42019 42025 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Acidianus;s__Acidianus hospitalis;t__Acidianus hospitalis W1 0 0 0 0 3 0 0 42750 42753 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrialba;s__Natrialba asiatica;t__Natrialba asiatica DSM 12278 0 0 0 0 5 12 0 87973 87990 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei dimarhabdovirus virus 3;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__unclassified viruses;c__Tongilchon virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 226 226 k__Bacteria;p__Armatimonadetes;c__Chthonomonadetes;o__Chthonomonadales;f__Chthonomonadaceae;g__Chthonomonas;s__Chthonomonas calidirosea;t__Chthonomonas calidirosea T49 0 0 0 0 0 0 0 68525 68525 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cellulophaga phage phi10:1;t__ 0 0 0 0 0 8 0 1065 1073 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus acidocaldarius;t__Sulfolobus acidocaldarius DSM 639 0 0 0 0 0 0 0 44519 44519 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus tokodaii;t__Sulfolobus tokodaii str. 7 0 0 0 0 0 3 0 53892 53895 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium crudilactis;t__ 21 0 0 0 0 422 0 46804 47247 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Butyrivibrio;s__Butyrivibrio sp. AE3006;t__ 0 4 0 0 53 546 0 82226 82829 k__Bacteria;p__Chloroflexi;c__Dehalococcoidia;o__;f__;g__Dehalogenimonas;s__Dehalogenimonas lykanthroporepellens;t__Dehalogenimonas lykanthroporepellens BL-DC-9 6 0 0 0 0 8 0 33716 33730 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage NR01;t__ 0 0 0 325 0 0 0 1901 2226 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus reuteri;t__Lactobacillus reuteri DSM 20016 0 1 12 5 5 150 0 39819 39992 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Thermosphaera;s__Thermosphaera aggregans;t__Thermosphaera aggregans DSM 11486 0 0 0 0 2 0 0 26329 26331 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus amylovorus;t__ 44 6 1 0 95 849 0 40565 41560 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Simplicispira;s__Simplicispira psychrophila;t__Simplicispira psychrophila DSM 11588 0 1 0 8 33 0 0 71906 71948 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Hoeflea;s__Hoeflea sp. IMCC20628;t__ 0 0 0 0 0 0 0 5418 5548 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Human gammaherpesvirus 8;t__ 0 0 0 0 0 0 0 2759 2759 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces neuii;t__Actinomyces neuii subsp. neuii 0 0 18 0 95 1 0 45241 45355 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Varibaculum;s__Varibaculum cambriense;t__Varibaculum cambriense DSM 15806 67 0 68 0 46 0 0 40261 40442 k__ArchaeaPlasmid;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Archaeoglobus;s__Archaeoglobus profundus;t__Archaeoglobus profundus DSM 5631 0 0 0 0 0 0 0 56 56 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinopolysporales;f__Actinopolysporaceae;g__Actinopolyspora;s__Actinopolyspora mortivallis;t__Actinopolyspora mortivallis DSM 44261 0 0 11 0 0 89 0 84501 84601 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus kefiranofaciens;t__Lactobacillus kefiranofaciens ZW3 0 0 0 0 11 5 0 4384 4819 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Microthrixaceae;g__Candidatus Microthrix;s__Candidatus Microthrix parvicella;t__Candidatus Microthrix parvicella RN1 0 0 0 1 0 0 0 83897 83898 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage vB_EfaS_IME197;t__ 0 0 0 0 4 137 0 685 826 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium americanum;t__ 0 0 0 0 0 0 0 59300 59732 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 69;t__ 0 0 0 0 0 0 0 221 221 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium vitis;t__Agrobacterium vitis S4 0 0 0 0 0 0 0 25927 26220 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia autotrophica;t__ 0 0 6 0 0 18 0 160167 160191 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus;s__Aerococcus urinae;t__ 1 0 16 30 4 0 0 39434 39485 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus pasteurii;t__Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 50 0 1 0 2 91 0 37908 38052 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium thermophilum;t__Rubellimicrobium thermophilum DSM 16684 0 0 294 0 34 0 0 62777 63105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-ShM2;t__ 0 0 0 1 1 0 0 3589 3591 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter ferrugineus;t__Pseudorhodobacter ferrugineus DSM 5888 2 0 0 0 5 207 0 68315 68529 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Propionimicrobium;s__Propionimicrobium lymphophilum;t__Propionimicrobium lymphophilum DSM 4903 0 83 52 0 8 0 0 40516 40659 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas sp. CB1;t__ 1 0 22 0 0 228 0 94205 94456 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella seminalis;t__Veillonella seminalis ACS-216-V-Col6b 11 283 2 0 165 29 0 45195 45685 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Nitrococcus;s__Nitrococcus mobilis;t__Nitrococcus mobilis Nb-231 2 0 1 1 2 0 0 72266 72272 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylogaea;s__Methylogaea oryzae;t__Methylogaea oryzae JCM 16910 0 0 7 0 1 0 0 72042 72050 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella amazonensis;t__Shewanella amazonensis SB2B 0 1 61 2 0 153 0 85905 86122 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus Sl4;t__ 0 0 0 0 24 15 0 523 562 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Prochlorococcus phage P-SSM2;t__ 0 0 0 0 0 0 0 5048 5048 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi13:2;t__ 0 0 0 0 0 251 0 1196 1447 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiorhodococcus;s__Thiorhodococcus drewsii;t__Thiorhodococcus drewsii AZ1 0 0 8 0 24 240 0 109951 110223 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiohalocapsa;s__Thiohalocapsa sp. ML1;t__ 0 1 1 1 3 0 0 125842 125848 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage TP901-1;t__ 0 0 0 0 0 0 0 753 753 k__BacteriaPlasmid;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma kunkelii;t__Spiroplasma kunkelii CR2-3x 0 0 0 0 0 0 0 1002 1009 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus metallicus;t__Sulfolobus metallicus DSM 6482 = JCM 9184 0 0 0 0 6 0 0 43972 43978 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella cibaria;t__ 0 0 0 23 0 0 0 2053 2206 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Cucumibacter;s__Cucumibacter marinus;t__Cucumibacter marinus DSM 18995 0 1 29 0 1 0 0 74156 74187 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__Thermoplasmataceae;g__Thermoplasma;s__Thermoplasma acidophilum;t__Thermoplasma acidophilum DSM 1728 0 0 0 0 0 12 0 31286 31298 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Papio hamadryas papillomavirus type 1;t__ 0 0 0 0 0 0 0 160 160 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Youngiibacter;s__Youngiibacter fragilis;t__Youngiibacter fragilis 232.1 16 0 0 0 10 0 0 79273 79303 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Arcanobacterium;s__Arcanobacterium sp. S3PF19;t__ 0 12 3 0 72 0 0 29691 29778 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium reuteri;t__Bifidobacterium reuteri DSM 23975 22 17 4 0 1 330 0 56528 56902 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage RB16;t__ 0 0 0 0 0 424 0 3111 3535 k__BacteriaPlasmid;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Deferribacter;s__Deferribacter desulfuricans;t__Deferribacter desulfuricans SSM1 0 0 0 0 0 0 0 6145 6170 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc sp. PCC 7524;t__ 0 0 0 0 0 0 0 1649 1674 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. PAMC 26617;t__ 0 0 1 0 1 34 0 93097 93133 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Gomontiellaceae;g__Crinalium;s__Crinalium epipsammum;t__Crinalium epipsammum PCC 9333 0 0 0 0 0 0 0 5852 6084 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Henriciella;s__Henriciella marina;t__Henriciella marina DSM 19595 1 3 46 1 19 0 0 65483 65553 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. CB0101;t__ 0 0 0 0 0 5 0 53549 53554 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azospira;s__Azospira oryzae;t__Dechlorosoma suillum PS 0 29 24 0 7 0 0 76079 76139 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium gallicum;t__Rhizobium gallicum bv. gallicum 0 0 0 2 1 66 0 63011 63555 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Croceicoccus;s__Croceicoccus naphthovorans;t__ 0 0 131 200 50 0 0 70495 70876 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__;g__Tropheryma;s__Tropheryma whipplei;t__Tropheryma whipplei str. Twist 0 0 2 1 0 0 0 18543 18546 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014e;t__ 0 0 0 3 5 598 0 3182 3788 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc citreum;t__Leuconostoc citreum KM20 0 0 0 8 0 183 0 1544 2001 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus solfataricus;t__Sulfolobus solfataricus P2 0 0 0 0 0 0 0 59843 59844 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum B 0 0 0 0 0 0 0 947 952 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 8801;t__ 0 0 0 0 0 0 0 1838 2161 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus brantae;t__Lactobacillus brantae DSM 23927 0 0 1 2 3 27 0 38543 38576 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax sp. RAC01;t__ 0 177 74 264 145 91 0 90746 91497 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage HY01;t__ 0 0 0 0 1179 34 0 2126 3339 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage RB14;t__ 0 0 0 0 66 1484 0 1758 3308 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Rodent protoparvovirus 1;t__Minute virus of mice 0 0 0 0 0 0 0 102 102 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Sulfuricurvum;s__Sulfuricurvum kujiense;t__Sulfuricurvum kujiense DSM 16994 0 0 0 0 0 0 0 4885 4885 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas sp. COT-290 OH3588;t__ 6 4 0 6 0 295 0 45471 45788 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio wodanis;t__ 0 0 0 0 0 0 0 2318 2322 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. LC103;t__ 0 0 2 25 4 11 0 120957 120999 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium japonicum;t__Bradyrhizobium japonicum USDA 6 0 0 1 13 22 3923 0 180188 184147 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis sp. H073;t__ 0 0 265 7 29 426 0 85403 86130 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma suis;t__Mycoplasma suis str. Illinois 0 0 0 0 0 3 0 14845 14848 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium parvulum;t__Atopobium parvulum DSM 20469 0 0 0 0 0 0 0 30876 30876 k__BacteriaPlasmid;p__Firmicutes;c__Tissierellia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus;s__Anaerococcus prevotii;t__Anaerococcus prevotii DSM 20548 0 0 0 0 0 0 0 1743 2311 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Rahnella;s__Rahnella aquatilis;t__Rahnella aquatilis HX2 0 0 0 0 0 0 0 13754 13888 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas stevensii;t__Halomonas stevensii S18214 0 155 270 6 0 203 0 73140 73774 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus infantis;t__Streptococcus infantis ATCC 700779 8 344 1 5 0 292 0 36978 37628 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteria bacterium KBS 146;t__ 0 0 0 0 28 2 0 99988 100018 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter guttiformis;t__Sulfitobacter guttiformis KCTC 32187 0 0 2 0 58 27 0 79441 79528 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Thermosynechococcus;s__Thermosynechococcus elongatus;t__Thermosynechococcus elongatus BP-1 1 0 1 1 0 0 0 51874 51877 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea coxensis;t__Nonomuraea coxensis DSM 45129 0 0 8 1 14 0 0 179669 179692 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 1780 1780 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius nubinhibens;t__Roseovarius nubinhibens ISM 0 0 1 0 564 25 0 72766 73356 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus panis;t__Lactobacillus panis DSM 6035 0 0 2 5 26 98 0 39694 39825 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Adoxophyes orana granulovirus;t__ 0 0 0 0 0 0 0 1993 1993 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Acidilobales;f__Caldisphaeraceae;g__Caldisphaera;s__Caldisphaera lagunensis;t__Caldisphaera lagunensis DSM 15908 0 0 0 0 0 0 0 30936 30936 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Idiomarinaceae;g__Idiomarina;s__Idiomarina sediminum;t__Idiomarina sediminum DSM 21906 0 0 3 2 0 21 0 52435 52461 k__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Solobacterium;s__Solobacterium moorei;t__Solobacterium moorei DSM 22971 3 366 0 0 0 0 0 46032 46401 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas composti;t__Arenimonas composti TR7-09 = DSM 18010 0 1 3 1 23 5 0 63096 63129 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanicola;s__Oceanicola granulosus;t__Oceanicola granulosus HTCC2516 0 0 6 0 104 0 0 80509 80619 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia polyisoprenivorans;t__Gordonia polyisoprenivorans VH2 0 0 4 51 0 106 0 113235 113396 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. ERG5;t__ 4 0 0 3 8 19 0 114604 114638 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium alamii;t__ 0 1 0 1 30 44 0 146172 146248 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Croceibacter phage P2559Y;t__ 0 0 0 0 0 0 0 863 863 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Puumala orthohantavirus;t__ 0 0 0 0 0 0 0 237 237 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas sputigena;t__Selenomonas sputigena ATCC 35185 0 3 0 0 26 5 0 51333 51367 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium kroppenstedtii;t__Corynebacterium kroppenstedtii DSM 44385 4 0 10 16 0 52 0 48854 48936 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Batrachovirus;s__Ranid herpesvirus 1;t__ 0 0 0 0 0 0 0 4417 4417 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobius;s__Thalassobius sp. CECT 5113;t__ 0 0 0 0 328 0 0 66669 66997 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp220virus;s__Campylobacter virus CP21;t__ 0 0 0 0 0 125 0 3531 3656 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Dulcamara mottle virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum yellow vein betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium plurifarium;t__ 44 17 108 15 0 217 0 142019 142420 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage P35;t__ 0 0 0 0 0 0 0 716 716 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planococcus;s__Planococcus antarcticus;t__Planococcus antarcticus DSM 14505 0 0 0 0 0 0 0 779 779 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage PfEFR-5;t__ 0 0 0 0 73 0 0 802 875 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Allofustis;s__Allofustis seminis;t__Allofustis seminis DSM 15817 18 45 3 392 0 0 0 28334 28792 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan nido-like virus 1;t__ 0 0 0 0 0 0 0 351 351 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Choristoneura fumiferana DEF multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2623 2623 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio scophthalmi;t__ 0 0 0 0 0 0 0 3884 3916 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCD505;t__ 0 0 0 0 238 361 0 387 986 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Pepper chlorotic spot virus;t__ 0 0 0 0 0 0 0 335 335 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Providencia;s__Providencia rettgeri;t__ 0 0 0 0 0 0 0 2142 2168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi46:3;t__ 0 0 0 0 0 468 0 991 1459 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phifelvirus;s__Enterococcus virus FL3;t__Enterococcus phage phiFL3A 0 0 0 0 0 0 0 791 791 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Citreicella;s__Citreicella sp. SE45;t__ 0 1 1 0 254 15 0 109639 109910 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tp21virus;s__Bacillus virus BMBtp2;t__ 0 0 0 0 92 0 0 646 738 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas sacchari;t__ 0 0 3 6 85 172 0 89683 89949 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfocurvus;s__Desulfocurvus vexinensis;t__Desulfocurvus vexinensis DSM 17965 81 14 57 1 294 0 0 71912 72359 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. Tv2a-2;t__ 0 0 0 3 0 50 0 169704 169757 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus sciuri;t__Staphylococcus sciuri subsp. sciuri 0 0 0 3 0 23 0 55642 55668 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Brochothrix phage A9;t__ 0 0 0 0 0 0 0 2541 2541 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. YS-1r;t__ 0 1 0 2 160 14 0 127312 127489 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi11virus;s__Streptococcus phage Alq132;t__ 0 0 0 0 18 0 0 692 710 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Flavobacterium phage 6H;t__ 834 0 0 0 0 0 0 105 939 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Percavirus;s__Equid gammaherpesvirus 2;t__ 0 0 0 0 0 0 0 3688 3688 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xylella;s__Xylella taiwanensis;t__ 0 1 1 0 16 0 0 54484 54502 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. RAC03;t__ 0 0 1 11 6 36 0 64586 64640 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Candidatus Burkholderia crenata;t__ 0 0 0 0 0 0 0 3453 3607 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Joydebpur betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio africanus;t__Desulfovibrio africanus str. Walvis Bay 0 0 0 2 0 0 0 84008 84010 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium mustelae;t__ 0 0 1 17 0 12 0 67801 67831 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__;s__Lausannevirus;t__ 0 0 0 0 0 0 0 6935 6935 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage phiEf11;t__ 0 0 0 0 1 0 0 855 856 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Edaphobacter;s__Edaphobacter aggregans;t__Edaphobacter aggregans DSM 19364 0 0 0 0 54 0 0 162706 162760 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermofilaceae;g__Thermofilum;s__Thermofilum uzonense;t__ 0 0 0 0 0 0 0 32239 32239 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Aeromonadales;f__Aeromonadaceae;g__Aeromonas;s__Aeromonas schubertii;t__ 0 0 93 0 0 277 0 87630 88000 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Oscillospiraceae;g__Oscillibacter;s__Oscillibacter sp. ER4;t__ 1 6 1 578 0 37 0 53722 54345 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCP13O;t__ 0 0 0 0 0 577 0 189 766 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage phig1e;t__ 0 0 0 0 0 0 0 845 845 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Shbh1;t__ 0 0 0 0 0 0 0 2761 2761 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_EarlPhillipIV;t__ 0 0 0 0 0 14 0 4464 4478 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus massiliensis;t__Staphylococcus massiliensis CCUG 55927 7 1 0 3 0 128 0 46149 46290 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudophaeobacter;s__Pseudophaeobacter arcticus;t__Pseudophaeobacter arcticus DSM 23566 0 0 5 3 816 0 0 100136 100960 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Chilli leaf curl Multan alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__BacteriaPlasmid;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Sebaldella;s__Sebaldella termitidis;t__Sebaldella termitidis ATCC 33386 0 0 0 0 0 0 0 1342 1354 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas suwonensis;t__Pseudoxanthomonas suwonensis J47 0 2 5 0 76 1 205 66545 66834 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium magnum;t__ 47 3 0 0 1 7 0 36368 36426 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio thiocyanodenitrificans;t__Thioalkalivibrio thiocyanodenitrificans ARhD 1 1 2 3 0 0 35 0 74869 74910 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola batsensis;t__Pseudooceanicola batsensis HTCC2597 1 0 0 0 634 0 0 88079 88714 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Chroococcales;f__Cyanobacteriaceae;g__Cyanobacterium;s__Cyanobacterium aponinum;t__Cyanobacterium aponinum PCC 10605 0 0 0 0 0 0 0 1218 1257 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0462;o__;f__;g__;s__;t__ 7 444 0 0 0 0 0 358 809 k__Bacteria;p__Firmicutes;c__Tissierellia;o__;f__;g__Kallipyga;s__Kallipyga gabonensis;t__ 343 2 1 0 0 0 0 32076 32422 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Fluoribacter;s__Fluoribacter dumoffii;t__Fluoribacter dumoffii NY 23 0 0 0 0 3 0 0 1680 4233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage CDMH1;t__ 0 0 0 0 199 7 0 879 1085 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus prophage Lj965;t__ 0 0 0 0 0 0 0 803 803 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL286;t__ 0 0 0 0 0 79 0 757 836 k__Viruses;p__unclassified bacterial viruses;c__Mycoplasma phage phiMFV1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 377 377 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Pleurocapsales;f__Dermocarpellaceae;g__Stanieria;s__Stanieria cyanosphaera;t__Stanieria cyanosphaera PCC 7437 0 0 0 0 0 0 0 9943 10066 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium adolescentis;t__Bifidobacterium adolescentis ATCC 15703 0 0 1 0 0 164 0 41627 41792 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Pseudoduganella;s__Pseudoduganella violaceinigra;t__Pseudoduganella violaceinigra DSM 15887 0 0 0 0 25 0 0 121955 121980 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage YMC/09/04/R1988;t__ 0 0 0 0 537 104 0 248 889 k__Viruses;p__unassigned viruses;c__Hytrosaviridae;o__;f__;g__Glossinavirus;s__Glossina hytrovirus;t__Glossina pallidipes salivary gland hypertrophy virus 0 0 0 0 0 0 0 3800 3800 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroflexus;s__Chloroflexus sp. Y-396-1;t__ 1 0 0 26 0 22 0 97758 97807 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridescent virus 6;t__ 0 0 0 0 0 0 0 4249 4249 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__;s__Coriobacteriaceae bacterium 68-1-3;t__ 18 7 44 0 0 0 0 39272 39341 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phinm4;t__ 0 0 0 0 276 576 0 11 863 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Streptococcus phage A25;t__ 0 0 0 4 0 0 0 673 677 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp. A03;t__ 0 0 0 0 14 0 0 57047 57061 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga petrophila;t__Thermotoga petrophila RKU-1 0 0 0 0 122 0 0 36348 36470 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia geojensis;t__ 0 0 1 0 0 0 0 88915 88916 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Gammabaculovirus;s__Neodiprion sertifer nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 1729 1729 k__BacteriaPlasmid;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella;s__Granulicella tundricola;t__Granulicella tundricola MP5ACTX9 0 0 0 0 0 0 0 23640 23889 k__Viruses;p__unclassified viruses;c__Pacmanvirus A23;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 7908 7908 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia elaeagni;t__ 0 0 5 0 0 4100 0 147408 151513 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__;s__Melbournevirus;t__ 0 0 0 0 3147 0 0 4240 7387 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas putida;t__ 0 0 4 0 0 7 8 122258 122277 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Shuttleworthia;s__Shuttleworthia satelles;t__Shuttleworthia satelles DSM 14600 11 45 0 110 6 0 0 43191 43363 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Corchorus golden mosaic virus;t__ 0 0 0 0 0 0 0 104 104 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia clevelandensis;t__Afipia clevelandensis ATCC 49720 0 0 2 1 51 62 0 87739 87855 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Komagataeibacter;s__Komagataeibacter xylinus;t__Komagataeibacter xylinus E25 0 9 7 0 160 1 0 68777 68954 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia niigatensis;t__Nocardia niigatensis NBRC 100131 20 0 4 10 9 305 0 163918 164266 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium aquaticum;t__ 0 0 0 0 0 0 0 43293 44186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__;s__Scale drop disease virus;t__ 0 0 0 0 0 0 0 2484 2484 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter;s__Enterobacter sp. 638;t__ 0 0 0 0 0 0 0 3145 3154 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sanxanigenens;t__Sphingomonas sanxanigenens DSM 19645 = NX02 0 1 2 43 828 146 0 123097 124117 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Xenophilus;s__Xenophilus azovorans;t__Xenophilus azovorans DSM 13620 0 56 3 82 1974 0 0 128211 130326 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__Hyphomicrobium zavarzinii;t__Hyphomicrobium zavarzinii ATCC 27496 0 0 7 0 1 4 0 92879 92891 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas panacihumi;t__ 0 0 0 0 12 37 0 78148 78197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi19:3;t__ 0 0 0 22 0 426 0 1071 1519 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium actinocoloniiforme;t__Bifidobacterium actinocoloniiforme DSM 22766 0 0 0 0 8 12 0 36581 36601 k__Viruses;p__unclassified bacterial viruses;c__Staphylococcus phage phi2958PVL;o__;f__;g__;s__;t__ 810 0 0 0 0 0 0 136 946 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__;f__Competibacteraceae;g__Candidatus Competibacter;s__Candidatus Competibacter denitrificans;t__Candidatus Competibacter denitrificans Run_A_D11 0 0 0 0 0 0 0 3854 3854 k__Viruses;p__unclassified bacterial viruses;c__Synechococcus phage S-CAM3;o__;f__;g__;s__;t__ 2 0 0 0 0 0 0 3961 3963 k__Archaea;p__Euryarchaeota;c__;o__;f__;g__Aciduliprofundum;s__Aciduliprofundum boonei;t__Aciduliprofundum boonei T469 0 0 0 0 0 0 0 29735 29735 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Palaeococcus;s__Palaeococcus ferrophilus;t__Palaeococcus ferrophilus DSM 13482 0 0 0 0 184 0 0 43902 44086 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Brevibacillus phage Jimmer1;t__ 0 0 0 0 157 0 0 929 1086 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Beijerinckia;s__Beijerinckia mobilis;t__ 0 0 171 9 7 33 0 86043 86263 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium;s__Acidobacterium capsulatum;t__Acidobacterium capsulatum ATCC 51196 0 0 0 0 7 0 0 82540 82547 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halomicrobium;s__Halomicrobium mukohataei;t__Halomicrobium mukohataei DSM 12286 0 0 2 3 7 0 0 62197 62209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Listeria phage WIL-1;t__ 0 0 0 0 0 0 0 2685 2685 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 85;t__ 0 0 0 0 7 37 0 841 885 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage SA13;t__ 0 0 0 0 511 62 0 280 853 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis kunsanensis;t__Nocardiopsis kunsanensis DSM 44524 0 0 2 1 0 21 0 106039 106063 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Acidihalobacter;s__Acidihalobacter prosperus;t__ 1 1 6 0 6 0 0 67162 67176 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium acetobutylicum;t__Clostridium acetobutylicum ATCC 824 0 0 0 0 0 0 0 3836 3839 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage phiAC-1;t__ 0 0 0 0 0 0 0 864 864 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. KORDI-52;t__ 0 0 3 41 0 186 0 51211 51441 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloplanus;s__Haloplanus natans;t__Haloplanus natans DSM 17983 0 0 4 4 3 0 0 75927 75938 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris JSC-3b 1 38 0 5 94 16 74 81002 81230 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus swuensis;t__ 2 0 0 0 0 63 0 70563 70628 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Human polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Bacteria;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Sphaerochaeta;s__Sphaerochaeta coccoides;t__Sphaerochaeta coccoides DSM 17374 0 0 0 0 0 4 0 44541 44545 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Sweet potato C6 virus;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Biseptimavirus;s__Staphylococcus phage Pvl108;t__ 42 0 0 0 536 104 0 215 897 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Acidobacterium;s__Acidobacterium ailaaui;t__ 0 0 0 0 8 0 0 73722 73730 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharothrix;s__Saccharothrix sp. NRRL B-16314;t__ 0 0 321 0 51 80 0 177730 178182 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus sp. ST04;t__ 0 0 0 0 0 61 0 34676 34737 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Regiella;s__Candidatus Regiella insecticola;t__Candidatus Regiella insecticola LSR1 0 0 0 0 0 0 0 633 649 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Spbetavirus;s__Bacillus virus SPbeta;t__ 0 0 0 0 0 0 0 2688 2688 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus gobiensis;t__Deinococcus gobiensis I-0 1 0 0 0 0 60 0 62681 62742 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus secaliphilus;t__ 0 0 1 0 1 62 0 32829 32893 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus SA12;t__Staphylococcus phage phiSA12 0 0 0 0 1 1622 0 1218 2841 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__;s__Dyella-like sp. DHo;t__ 31 1 6 10 25 0 0 83119 83193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Gallid alphaherpesvirus 2;t__ 0 0 0 0 0 0 0 3557 3557 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus D;t__Rotavirus D chicken/05V0049/DEU/2005 0 0 0 0 0 0 0 351 351 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus eurythermalis;t__ 0 0 0 0 0 160 0 42290 42450 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage phIS3501;t__ 0 0 0 0 1 13 0 874 888 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia helvetica;t__Rickettsia helvetica C9P9 0 0 0 0 0 0 0 597 943 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus K;t__ 0 0 0 0 28 2542 0 396 2966 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. H5;t__ 1 0 1 11 19 2 0 85220 85254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rsl2virus;s__Ralstonia virus RSL2;t__Ralstonia phage RSL2 0 0 0 0 0 0 0 4478 4478 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella hackeliae;t__ 0 0 0 0 0 0 0 2527 2597 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Pleomorphomonas;s__Pleomorphomonas oryzae;t__Pleomorphomonas oryzae DSM 16300 0 0 2 6 0 0 0 104521 104529 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cronobacter phage vB_CsaM_GAP32;t__ 0 0 0 0 0 0 0 7173 7173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage B025;t__ 0 0 0 0 0 0 0 853 853 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Salinisphaerales;f__Salinisphaeraceae;g__Salinisphaera;s__Salinisphaera shabanensis;t__Salinisphaera shabanensis E1L3A 0 0 61 0 0 0 0 75070 75131 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Nevskia;s__Nevskia ramosa;t__Nevskia ramosa DSM 11499 0 0 1 0 11 8 0 90262 90282 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio campbellii;t__Vibrio campbellii ATCC BAA-1116 0 0 0 0 0 0 0 1438 1780 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc lactis;t__ 0 0 0 0 0 0 0 941 1007 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Metallosphaera;s__Metallosphaera cuprina;t__Metallosphaera cuprina Ar-4 0 0 0 0 0 0 0 36806 36806 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Cryptobacterium;s__Cryptobacterium curtum;t__Cryptobacterium curtum DSM 15641 0 0 1 0 5 0 0 32350 32356 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Niveispirillum;s__Niveispirillum irakense;t__Niveispirillum irakense DSM 11586 0 0 4 0 0 0 0 108880 108884 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Mobiluncus;s__Mobiluncus mulieris;t__Mobiluncus mulieris ATCC 35243 51 0 8 0 10 54 0 47721 47844 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage 2638A;t__ 0 0 0 0 0 0 0 826 826 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;t__Halalkalicoccus jeotgali B3 0 0 0 0 0 0 0 17768 17781 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas otitidis;t__ 0 60 5 0 0 30 0 126647 126742 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio vulgaris;t__Desulfovibrio vulgaris str. Hildenborough 0 2 0 4 0 19 34 71358 71417 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Sha1;t__ 0 0 0 0 0 0 0 834 834 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage BM5;t__ 0 0 0 0 0 0 0 3300 3300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Alloherpesviridae;g__Ictalurivirus;s__Ictalurid herpesvirus 1;t__ 0 0 0 0 0 0 0 2684 2684 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Oscillochloridaceae;g__Oscillochloris;s__Oscillochloris trichoides;t__Oscillochloris trichoides DG-6 0 0 0 0 0 0 0 85995 85995 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Silviavirus;s__Staphylococcus phage Stau2;t__ 0 0 0 0 1 0 0 2674 2675 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Acidianus rod-shaped virus 2;t__ 0 0 0 0 0 0 0 595 595 k__BacteriaPlasmid;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Calditerrivibrio;s__Calditerrivibrio nitroreducens;t__Calditerrivibrio nitroreducens DSM 19672 0 0 0 0 0 0 0 1150 1174 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Tl2011virus;s__Escherichia virus PA2;t__Escherichia phage PA2 0 0 0 24 1231 8 0 8 1271 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium fortuitum;t__ 0 0 0 3 0 90 0 124999 125092 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Thermobifida;s__Thermobifida fusca;t__Thermobifida fusca YX 0 0 12 0 30 0 0 72802 72844 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Williamsiaceae;g__Williamsia;s__Williamsia muralis;t__Williamsia muralis NBRC 105860 0 0 0 0 0 0 0 110722 110722 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCD111;t__ 0 0 0 18 0 160 0 653 831 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Myxococcaceae;g__Corallococcus;s__Corallococcus coralloides;t__Corallococcus coralloides DSM 2259 0 0 0 86 36 0 0 201490 201612 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Metallosphaera;s__Metallosphaera sedula;t__Metallosphaera sedula DSM 5348 0 0 0 0 8 0 0 43811 43830 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Intestinimonas;s__Intestinimonas butyriciproducens;t__ 12 0 0 173 44 0 0 67299 67528 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Tatumella;s__Tatumella morbirosei;t__ 0 0 0 0 0 0 0 112 113 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Fibrisoma;s__Fibrisoma limi;t__Fibrisoma limi BUZ 3 0 0 0 0 0 0 0 3489 3489 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp. ALJT;t__ 0 0 4 0 0 94 0 53022 53120 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. KORDI-100;t__ 0 0 3 20 1 37 0 55718 55779 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella stercoris;t__Collinsella stercoris DSM 13279 0 1 2 0 0 18 0 47642 47663 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Hoody T;t__ 0 0 0 0 1585 633 0 978 3196 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__;s__Ruminococcaceae bacterium AE2021;t__ 1 0 0 1 0 34 0 61642 61678 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Pseudohongiella;s__Pseudohongiella spirulinae;t__ 0 0 12 0 0 0 0 66890 66902 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage BM13;t__ 0 0 0 0 0 42 0 576 618 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosaetaceae;g__Methanosaeta;s__Methanosaeta harundinacea;t__Methanosaeta harundinacea 6Ac 0 0 0 1 0 0 0 51179 51180 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage B166;t__ 2 1 0 0 204 392 0 258 857 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halobiforma;s__Halobiforma nitratireducens;t__Halobiforma nitratireducens JCM 10879 0 0 1 0 79 0 0 73306 73386 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Macrococcus;s__Macrococcus caseolyticus;t__Macrococcus caseolyticus JCSC5402 0 0 0 0 0 0 0 2204 2335 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia insulae;t__Devosia insulae DS-56 1 1 0 1 1 16 0 114206 114226 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Panine betaherpesvirus 2;t__ 0 0 0 0 0 0 0 4821 4821 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus herbarius;t__Alicyclobacillus herbarius DSM 13609 0 0 0 0 0 2 0 66057 66059 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella petrii;t__ 0 10 2 145 162 38 0 105401 105758 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus acidifarinae;t__Lactobacillus acidifarinae DSM 19394 0 0 2 2 0 118 0 58162 58284 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Se1virus;s__Salmonella virus SE1;t__Salmonella phage PVP-SE1 0 0 0 0 0 0 0 2919 2919 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus rufus;t__Meiothermus rufus DSM 22234 96 0 0 0 0 210 0 54369 54676 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus shenzhenensis;t__Lactobacillus shenzhenensis LY-73 0 1 0 0 0 22 0 64233 64256 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp. AAP83;t__ 0 0 1 7 8 0 0 84472 84488 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera daeponensis;t__Leisingera daeponensis DSM 23529 0 0 2 0 1247 1729 0 89838 92816 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella longbeachae;t__Legionella longbeachae NSW150 0 0 0 0 0 1 0 1388 1436 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Brucellaceae;g__Ochrobactrum;s__Ochrobactrum anthropi;t__Ochrobactrum anthropi ATCC 49188 0 0 0 16 0 0 0 8119 8445 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 1;t__ 0 0 0 0 0 0 0 57 57 k__Bacteria;p__Actinobacteria;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter xylanophilus;t__Rubrobacter xylanophilus DSM 9941 0 0 0 0 0 0 0 64514 64514 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Fodinicurvata;s__Fodinicurvata sediminis;t__Fodinicurvata sediminis DSM 21159 0 0 4 1 1 0 0 73769 73775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cd119virus;s__Clostridium virus phiCD27;t__ 0 0 0 0 0 187 0 831 1018 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus taiwanensis;t__Cupriavidus taiwanensis LMG 19424 0 0 0 0 0 0 0 10969 11137 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter iguaniorum;t__ 0 0 0 0 0 0 0 1400 1400 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus elongatus;t__Synechococcus elongatus PCC 6301 0 0 4 1 1 0 0 53919 53925 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus endophyticus;t__ 0 0 0 0 0 1 0 8926 8954 k__Bacteria;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Thermocrinis;s__Thermocrinis albus;t__Thermocrinis albus DSM 14484 0 0 0 0 6 0 0 30005 30011 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Runella;s__Runella slithyformis;t__Runella slithyformis DSM 19594 0 0 0 0 0 0 0 6987 7012 k__BacteriaPlasmid;p__Bacteroidetes;c__Saprospiria;o__Saprospirales;f__Haliscomenobacteraceae;g__Haliscomenobacter;s__Haliscomenobacter hydrossis;t__Haliscomenobacter hydrossis DSM 1100 0 0 0 0 0 0 0 7946 7995 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0460-1;o__;f__;g__;s__;t__ 57 420 0 0 0 0 0 359 836 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio versutus;t__ 0 0 4 0 0 77 0 59306 59387 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas wittichii;t__ 0 0 2 3 20 90 7 97647 97769 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bdellovibrio phage phi1422;t__ 0 0 0 0 0 0 0 907 907 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus hokkaidonensis;t__Lactobacillus hokkaidonensis JCM 18461 0 0 0 4 34 67 0 1310 2450 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Intestinimonas;s__Intestinimonas massiliensis;t__ 27 12 0 321 0 38 0 61646 62044 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Scardovia;s__Scardovia wiggsiae;t__Scardovia wiggsiae F0424 6 0 5 0 13 0 0 30992 31016 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium xenophagum;t__Sphingobium xenophagum NBRC 107872 35 0 0 6 81 0 0 89341 89464 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas resinovorans;t__Pseudomonas resinovorans NBRC 106553 0 11 34 0 0 373 0 125299 125717 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp. MBES04;t__ 0 60 4 8 683 130 0 102701 103586 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus LSPA1;t__Salmonella phage LSPA1 0 0 0 0 0 0 0 837 837 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter denitrificans;t__ 0 0 2 13 28 1202 0 83264 84509 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Nitrospirillum;s__Nitrospirillum amazonense;t__Nitrospirillum amazonense Y2 0 0 0 0 0 0 0 124458 124458 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus aquaticus;t__Thermus aquaticus Y51MC23 1 0 2 0 0 126 0 43050 43179 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter sp. 115;t__ 0 0 0 9 16 284 0 83554 83863 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__ 0 3 0 1 1 0 0 120753 120758 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. Root1471;t__ 0 1 1 13 5 53 0 74854 74927 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium lablabi;t__ 0 0 0 8 14 162 0 174966 175150 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio thiocyanoxidans;t__Thioalkalivibrio thiocyanoxidans ARh2 0 0 1 0 0 33 0 55160 55194 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter denitrificans;t__Roseobacter denitrificans OCh 114 0 2 0 0 14 0 0 82645 82661 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hapunavirus;s__Vibrio phage VP882;t__ 0 0 0 0 0 0 0 763 763 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Myxococcaceae;g__Myxococcus;s__Myxococcus stipitatus;t__Myxococcus stipitatus DSM 14675 1 0 1 71 19 76 0 206843 207011 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus gallolyticus;t__Streptococcus gallolyticus subsp. gallolyticus 1 337 0 21 0 341 0 46544 47244 k__Bacteria;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. DG25B;t__ 0 0 0 2 8 24 0 77458 77492 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Methyloversatilis;s__Methyloversatilis universalis;t__Methyloversatilis universalis FAM5 0 15 193 0 78 203 0 84096 84585 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Eggerthella;s__Eggerthella lenta;t__Eggerthella lenta DSM 2243 0 0 1 0 6 0 0 72638 72645 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Deltabaculovirus;s__Culex nigripalpus nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2165 2165 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiorhodococcus;s__Thiorhodococcus sp. AK35;t__ 0 1 6 0 19 0 0 95023 95049 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. KORDI-49;t__ 0 0 0 33 0 116 0 51567 51716 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas oryzihabitans;t__ 0 0 28 0 4 211 0 96444 96687 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia felis;t__Afipia felis ATCC 53690 0 0 1 6 143 11 0 83769 83930 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium alhagi;t__Mesorhizobium alhagi CCNWXJ12-2 0 0 2 41 6 55 0 138565 138669 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus sp. YIM 77859;t__ 2 0 0 0 0 31 0 63351 63384 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella pertussis;t__Bordetella pertussis Tohama I 0 0 2 20 84 32583 0 49034 81723 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azovibrio;s__Azovibrio restrictus;t__Azovibrio restrictus DSM 23866 0 2 9 0 124 0 0 80237 80372 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium tsurumiense;t__ 0 0 0 0 42 21 0 43174 43237 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Archaeoglobus;s__Archaeoglobus veneficus;t__Archaeoglobus veneficus SNP6 0 0 0 0 0 0 0 38038 38038 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Calditerricola;s__Calditerricola satsumensis;t__Calditerricola satsumensis JCM 14719 0 0 0 1 2 0 0 43291 43294 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium meliloti;t__Sinorhizobium meliloti 1021 0 0 0 22 66 414 0 72580 73082 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. LC145;t__ 0 0 163 3 47 24 0 117304 117541 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Acidovorax;s__Acidovorax ebreus;t__Acidovorax ebreus TPSY 0 15 8 98 826 9 0 74975 75931 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis gilva;t__Nocardiopsis gilva YIM 90087 0 0 2 1 2 22 0 119657 119684 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Maricaulis;s__Maricaulis maris;t__Maricaulis maris MCS10 0 0 8 1 2 0 0 67364 67375 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__Actinobacteria bacterium IMCC26256;t__ 0 0 0 0 0 0 0 49237 49237 k__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;s__Veillonella sp. oral taxon 780;t__Veillonella sp. oral taxon 780 str. F0422 0 13 1 0 0 93 0 34377 34484 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. PDO1-076;t__ 0 0 1 7 53 19 0 109190 109270 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage SEN22;t__ 0 0 0 18 109 1 0 698 826 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteriaceae bacterium URHE0068;t__ 0 0 0 0 8 9 0 133290 133307 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis sp. MWB1;t__ 0 0 1 4 16 30 0 62309 62360 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas koreensis;t__ 0 0 48 0 4 53 0 60384 60489 k__Archaea;p__Thaumarchaeota;c__Nitrososphaeria;o__Nitrososphaerales;f__Nitrososphaeraceae;g__Nitrososphaera;s__Nitrososphaera viennensis;t__Nitrososphaera viennensis EN76 0 0 0 0 0 0 0 50558 50558 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Synechococcus phage S-CBS2;t__ 0 0 0 0 0 0 0 1446 1446 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Ea92virus;s__Erwinia virus Frozen;t__Erwinia phage vB_EamP_Frozen 0 0 0 0 0 161 0 1341 1502 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. UASWS1009;t__ 1 1 0 165 0 22 0 125803 125992 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Alloscardovia;s__Alloscardovia omnicolens;t__Alloscardovia omnicolens DSM 21503 23 7 1 0 5 0 0 36829 36865 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__;s__beta proteobacterium AAP99;t__ 0 1 13 0 0 0 0 77100 77114 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Shinella;s__Shinella sp. HZN7;t__ 0 0 33 8 92 0 0 93438 93571 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Sutterellaceae;g__Sutterella;s__Sutterella wadsworthensis;t__Sutterella wadsworthensis 2_1_59BFAA 0 1 6 16 15 30 28 53106 53202 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium bohemicum;t__Bifidobacterium bohemicum DSM 22767 0 0 1 0 1 10 0 41030 41042 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronobacterium;s__Natronobacterium gregoryi;t__Natronobacterium gregoryi SP2 0 0 16 0 134 0 0 75617 75767 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas nasdae;t__ 15 0 187 0 1 94 0 67698 67995 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Ferrimonadaceae;g__Ferrimonas;s__Ferrimonas futtsuensis;t__Ferrimonas futtsuensis DSM 18154 0 0 0 0 0 1 0 85802 85803 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage LfeSau;t__ 0 0 0 0 0 0 0 634 634 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. URHA0032;t__ 1 0 8 0 0 50 0 91096 91155 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia symbiont of Datisca glomerata;t__ 0 0 7 0 0 32 0 106424 106463 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora spinosa;t__Saccharopolyspora spinosa NRRL 18395 0 0 3 0 4 0 0 170334 170341 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Tepidimonas;s__Tepidimonas taiwanensis;t__ 0 10 30 98 5 0 0 58244 58387 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas suwonensis;t__ 0 0 0 0 39 0 0 77792 77831 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella sp. MS5;t__ 5 0 2 91 0 12 0 39272 39382 k__Bacteria;p__Bacteroidetes;c__;o__Bacteroidetes Order II. Incertae sedis;f__Rhodothermaceae;g__Salisaeta;s__Salisaeta longa;t__Salisaeta longa DSM 21114 0 0 0 0 0 0 0 67973 67973 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Phthorimaea operculella granulovirus;t__ 0 0 0 0 0 0 0 2384 2384 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Pseudorhodoferax;s__Pseudorhodoferax sp. Leaf267;t__ 0 0 1 4 42 0 0 130509 130556 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium intracellulare;t__Mycobacterium intracellulare ATCC 13950 0 0 0 3 0 45 0 108000 108048 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cd119virus;s__Clostridium phage phiCDHM11;t__ 0 0 0 5 26 10 0 579 620 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus igniterrae;t__Thermus igniterrae ATCC 700962 0 0 1 0 8 486 0 43887 44382 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Hoeflea;s__Hoeflea sp. 108;t__ 0 22 262 71 51 0 0 121825 122231 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium casei;t__Corynebacterium casei LMG S-19264 0 0 101 6 0 721 0 61441 62269 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium rhizogenes;t__ 0 0 1 5 90 1 22 146145 146264 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Parachlamydiaceae;g__Candidatus Protochlamydia;s__Protochlamydia naegleriophila;t__ 0 0 0 0 0 0 0 2869 2905 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis alkaliphila;t__Nocardiopsis alkaliphila YIM 80379 0 0 3 1 0 92 0 103652 103748 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia sp. P52-10;t__ 0 0 1 2 28 0 0 101664 101695 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pectobacterium bacteriophage PM2;t__ 0 0 0 0 0 0 0 3405 3405 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella;s__Granulicella mallensis;t__Granulicella mallensis MP5ACTX8 1 0 0 0 10 0 0 124740 124751 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Oceanicaulis;s__Oceanicaulis sp. HL-87;t__ 0 0 6 1 0 0 0 54872 54879 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella osloensis;t__ 0 0 0 0 0 0 0 4147 4283 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Sulfolobales;f__Sulfolobaceae;g__Sulfolobus;s__Sulfolobus islandicus;t__Sulfolobus islandicus L.S.2.15 0 0 0 0 17 2892 0 51816 54725 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus barophilus;t__Thermococcus barophilus MP 0 0 0 0 17 15 0 40169 40201 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Trichormus;s__Trichormus azollae;t__'Nostoc azollae' 0708 0 0 0 0 0 0 0 2627 2627 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Una961virus;s__Helicobacter virus 1961P;t__Helicobacter phage 1961P 0 0 0 0 0 0 0 536 536 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Cyanothecaceae;g__Cyanothece;s__Cyanothece sp. PCC 7425;t__ 0 0 0 0 0 0 0 7721 8227 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Mamestra brassicae multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 1624 0 1430 3054 k__Bacteria;p__Gemmatimonadetes;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas aurantiaca;t__Gemmatimonas aurantiaca T-27 0 0 0 0 0 0 0 92739 92739 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Uncultured phage WW-nAnB strain 3;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Luffa puckering and leaf distortion-associated betasatellite [India:Gurdaspur:Okra:2013];t__ 0 0 0 0 0 0 0 27 27 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylocapsa;s__Methylocapsa acidiphila;t__Methylocapsa acidiphila B2 0 0 2 18 48 0 0 81981 82049 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces coleocanis;t__Actinomyces coleocanis DSM 15436 12 0 10 0 0 0 0 34291 34313 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Bhargavaea;s__Bhargavaea cecembensis;t__Bhargavaea cecembensis DSE10 0 0 3 18 1 0 0 64056 64078 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas somerae;t__ 0 0 0 0 0 0 0 46613 46613 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium saccharoperbutylacetonicum;t__Clostridium saccharoperbutylacetonicum N1-4 0 0 0 0 0 0 0 2722 2723 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Temperate phage phiNIH1.1;t__ 0 0 0 0 0 0 0 862 862 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__;s__Acidobacteriaceae bacterium KBS 83;t__ 0 0 0 0 18 1 0 124912 124931 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage P9;t__ 0 0 0 0 0 1 0 809 810 k__Bacteria;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Ammonifex;s__Ammonifex degensii;t__Ammonifex degensii KC4 0 0 0 0 1 0 0 42583 42584 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella hinzii;t__ 0 113 5 265 119 145 0 97612 98259 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Geoglobus;s__Geoglobus ahangari;t__ 0 0 0 0 10 17 0 35374 35401 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Citrobacter phage Stevie;t__ 0 0 0 0 121 22 0 853 996 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Thermobacillus;s__Thermobacillus composti;t__Thermobacillus composti KWC4 0 0 0 0 0 0 0 2885 2983 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus murrayi;t__Deinococcus murrayi DSM 11303 0 0 0 0 0 157 0 54918 55075 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Alkalilimnicola;s__Alkalilimnicola ehrlichii;t__Alkalilimnicola ehrlichii MLHE-1 0 1 5 4 1 0 0 65507 65518 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium etli;t__Rhizobium etli CFN 42 0 0 0 0 1 0 0 42624 42963 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Thermoproteus;s__Thermoproteus uzoniensis;t__Thermoproteus uzoniensis 768-20 0 0 0 0 5 0 0 38716 38721 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Roseiflexaceae;g__Roseiflexus;s__Roseiflexus sp. RS-1;t__ 0 0 0 0 0 0 0 116031 116031 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium etli;t__Rhizobium etli CFN 42 16 8 1 10 75 58 0 87464 87632 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. Root1212;t__ 0 0 0 9 37 26 0 106777 106849 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter sp. LW-1;t__ 55 0 5 0 104 18 0 86504 86686 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminiclostridium;s__[Clostridium] viride;t__[Clostridium] viride DSM 6836 0 0 0 12 0 0 0 48258 48270 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus deserti;t__Deinococcus deserti VCD115 0 0 0 0 0 57 0 56339 56396 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Abouovirus;s__Brevibacillus virus Davies;t__Brevibacillus phage Davies 0 0 0 0 0 4 0 911 915 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Hydrogenophilales;f__Hydrogenophilaceae;g__Tepidiphilus;s__Tepidiphilus thermophilus;t__ 0 0 20 0 1 0 0 45077 45098 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Candidatus Phaeomarinobacter;s__Candidatus Phaeomarinobacter ectocarpi;t__ 0 1 0 5 0 0 0 68240 68246 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium durum;t__Corynebacterium durum F0235 0 0 1 1 0 5 0 56092 56099 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis nigrescens;t__Amycolatopsis nigrescens CSC17Ta-90 0 0 50 0 12 76 0 182082 182220 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella vestfoldensis;t__Loktanella vestfoldensis DSM 16212 0 0 1 0 83 13 0 74177 74274 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea sp. PSNIH2;t__ 0 0 0 46 0 2 0 9941 13918 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis macrogoltabida;t__ 0 0 2 34 170 1520 0 101772 103498 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium subterraneum;t__ 0 1 127 290 2282 281 0 94635 97616 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer adhaerens;t__ 0 0 2 10 176 65 0 81170 81423 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium zucineum;t__Phenylobacterium zucineum HLK1 0 1 2 0 2 0 0 79920 79925 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Archangiaceae;g__Cystobacter;s__Cystobacter fuscus;t__Cystobacter fuscus DSM 2262 12 144 1 0 17 0 0 245329 245503 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis fribergensis;t__ 0 0 0 0 200 901 0 98770 99871 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Kaistia;s__Kaistia granuli;t__Kaistia granuli DSM 23481 0 0 2 5 0 113 0 95167 95287 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas melonis;t__Sphingomonas melonis TY 0 0 1 6 14 106 0 83002 83129 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Proboscivirus;s__Elephant endotheliotropic herpesvirus 5;t__ 0 0 0 0 0 0 0 3615 3615 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Tistrella;s__Tistrella mobilis;t__Tistrella mobilis KA081020-065 0 0 4 3 3 0 0 78379 78389 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas alcaligenes;t__ 0 0 12 0 0 55 0 88059 88126 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Thiomonas;s__Thiomonas sp. FB-6;t__ 0 3 2 18 1 35 0 83860 83919 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Nitrobacter;s__Nitrobacter hamburgensis;t__Nitrobacter hamburgensis X14 0 0 1 2 32 0 0 88104 88139 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium lactis;t__Corynebacterium lactis RW2-5 0 0 2 10 0 17 0 55365 55394 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus G1;t__Staphylococcus phage Team1 0 0 0 0 0 352 0 2466 2818 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Ostreococcus lucimarinus virus 1;t__ 0 0 0 0 0 3 0 3877 3880 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Rhodospirillum;s__Rhodospirillum centenum;t__Rhodospirillum centenum SW 0 2 31 1 11 0 0 87065 87110 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter sp. Ag1;t__ 2 0 3 1 14 1 0 70506 70527 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__Hyphomicrobium sp. MC1;t__ 0 0 1 0 1 0 0 95148 95150 k__Bacteria;p__Bacteroidetes;c__;o__Bacteroidetes Order II. Incertae sedis;f__Rhodothermaceae;g__Salinibacter;s__Salinibacter ruber;t__Salinibacter ruber DSM 13855 0 1 0 0 0 0 0 71035 71036 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azoarcus;s__Azoarcus olearius;t__ 0 1 29 0 0 0 0 89005 89035 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus salifodinae;t__Halococcus salifodinae DSM 8989 0 0 39 0 0 395 0 83351 83785 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylopila;s__Methylopila sp. M107;t__ 0 1 0 11 0 0 0 89055 89067 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Tetrasphaera;s__Tetrasphaera jenkinsii;t__Tetrasphaera jenkinsii Ben 74 0 0 29 88 23 133 0 75093 75370 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus Riley;t__Bacillus phage Riley 0 0 0 0 921 582 0 1753 3256 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Erwinia;s__Erwinia amylovora;t__Erwinia amylovora CFBP1430 0 0 0 0 0 0 0 565 565 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Thauera;s__Thauera terpenica;t__Thauera terpenica 58Eu 107 30 103 0 16 286 0 82125 82667 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage iA2;t__ 0 0 0 0 0 99 0 584 683 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibacterium;s__Roseibacterium elongatum;t__Roseibacterium elongatum DSM 19469 0 0 3 0 78 0 0 71021 71102 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus aminovorans;t__ 3 0 29 0 49 949 0 89821 90851 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Marbled eel polyomavirus;t__ 0 0 0 0 0 0 0 286 286 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Bovine alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2706 2706 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria mobilis;t__Ruegeria mobilis F1926 0 0 0 0 27 3 0 65185 65215 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. Leaf26;t__ 0 0 0 2 9 30 0 96343 96384 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas halodenitrificans;t__Halomonas halodenitrificans DSM 735 0 0 0 0 8 128 0 69007 69143 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. LTSP885;t__ 0 0 0 4 14 108 0 156765 156891 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Vibrio phage SIO-2;t__ 0 0 0 0 0 0 0 1623 1623 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Turicella;s__Turicella otitidis;t__Turicella otitidis ATCC 51513 0 0 13 1 101 0 0 41533 41648 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. GA-1331;t__ 0 0 1 4 0 1296 0 102681 103982 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Ostreococcus tauri virus OtV5;t__ 0 0 0 0 0 976 0 2758 3734 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp. 228;t__ 0 0 41 0 64 85 0 82051 82241 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Jonesiaceae;g__Jonesia;s__Jonesia denitrificans;t__Jonesia denitrificans DSM 20603 0 0 15 26 0 0 0 54951 54992 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Magnetospirillum;s__Magnetospirillum caucaseum;t__ 0 1 4 2 0 1158 0 95800 96965 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassobaculum;s__Thalassobaculum salexigens;t__Thalassobaculum salexigens DSM 19539 0 23 16 2 10 0 0 101522 101573 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Nereida;s__Nereida ignava;t__ 112 0 0 0 19 0 0 57507 57638 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__;g__Timonella;s__Timonella senegalensis;t__Timonella senegalensis JC301 3 0 7 12 0 0 0 59563 59585 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp. Leaf2;t__ 47 0 1 13 1 20 0 74190 74272 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis sp. Root1497;t__ 0 1 0 7 15 73 0 95802 95898 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Adlercreutzia;s__Adlercreutzia equolifaciens;t__Adlercreutzia equolifaciens DSM 19450 0 0 3 0 105 0 0 57142 57250 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces bingchenggensis;t__Streptomyces bingchenggensis BCW-1 8 0 20 0 0 361 0 238344 238733 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Segniliparaceae;g__Segniliparus;s__Segniliparus rotundus;t__Segniliparus rotundus DSM 44985 2 0 2 6 0 0 0 63140 63150 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Solimonas;s__Solimonas soli;t__Solimonas soli DSM 21787 0 0 3 0 0 0 0 83581 83584 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. H14;t__ 0 0 5 9 33 219 0 83314 83580 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. PR090111-T3T-6A;t__ 0 0 1 0 3 24 0 78139 78167 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Pacificimonas;s__Pacificimonas flava;t__ 0 1 2 206 268 0 0 64527 65004 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter henricii;t__ 0 0 7 0 12 85 0 99472 99576 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas atlantica;t__ 0 5 1 1 0 0 0 71966 71973 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis mediterranei;t__Amycolatopsis mediterranei U32 0 0 33 0 12 9 0 204680 204734 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium avium;t__Mycobacterium avium subsp. avium 0 0 0 1 0 1203 1 89007 90212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus Rodi;t__Staphylococcus phage phiIPLA-RODI 0 0 0 0 2 1333 0 1511 2846 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiMMP04;t__ 0 0 0 2 1 0 0 630 633 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes sp. SE50/110;t__ 0 0 29 0 74 296 0 184398 184797 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Myxococcaceae;g__Myxococcus;s__Myxococcus xanthus;t__Myxococcus xanthus DK 1622 0 0 0 75 53 1225 0 181442 182795 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Twortvirus;s__Staphylococcus phage vB_SauM_Remus;t__ 0 0 0 0 1096 0 0 1596 2692 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Desulfuromonadaceae;g__Pelobacter;s__Pelobacter propionicus;t__Pelobacter propionicus DSM 2379 0 0 0 0 0 0 0 4281 4659 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014j;t__ 0 0 0 3 2 421 0 3416 3842 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium nodulans;t__Methylobacterium nodulans ORS 2060 0 1 2 15 4 173 0 155254 155449 k__Bacteria;p__Chloroflexi;c__Dehalococcoidia;o__;f__;g__Dehalogenimonas;s__Dehalogenimonas alkenigignens;t__ 0 0 0 0 0 0 0 36994 36994 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Wenxinia;s__Wenxinia marina;t__Wenxinia marina DSM 24838 0 0 3 0 15 0 0 83408 83426 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides fragilis;t__Bacteroides fragilis YCH46 0 0 0 0 0 0 0 654 674 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage phi3396;t__ 0 0 0 0 0 0 0 770 770 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanoculleus;s__Methanoculleus marisnigri;t__Methanoculleus marisnigri JR1 0 0 0 0 0 1069 0 48491 49560 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium ravenspurgense;t__Brevibacterium ravenspurgense 5401308 = CCUG 53855 102 0 255 101 0 5 0 46472 46935 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus G15;t__Staphylococcus phage GH15 0 0 0 0 0 0 0 2796 2796 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Phaeovirus;s__Ectocarpus siliculosus virus 1;t__ 0 0 0 0 0 0 0 6711 6711 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Gryllus bimaculatus nudivirus;t__ 0 0 0 0 0 0 0 1938 1938 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridescent virus 31;t__Armadillidium vulgare iridescent virus 0 0 0 0 0 0 0 4404 4404 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Stappia;s__Stappia stellulata;t__Stappia stellulata DSM 5886 0 1 51 0 23 0 0 92270 92345 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Avipoxvirus;s__Penguinpox virus;t__ 0 0 0 0 0 288 0 5849 6137 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Agrotis segetum nucleopolyhedrovirus B;t__ 0 0 0 0 0 1 0 2978 2979 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage vB_KleM-RaK2;t__ 0 0 0 0 0 0 0 6916 6916 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage P13374;t__ 0 0 0 0 446 12 0 759 1217 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Roseiflexaceae;g__Roseiflexus;s__Roseiflexus castenholzii;t__Roseiflexus castenholzii DSM 13941 2 0 0 146 0 8 0 114309 114465 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Anaplasmataceae;g__Anaplasma;s__Anaplasma marginale;t__Anaplasma marginale str. Florida 0 0 0 0 1 508 0 23539 24048 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Tepidicaulis;s__Tepidicaulis marinus;t__ 0 0 3 1 82 0 0 69344 69430 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium heckeshornense;t__ 0 0 0 0 0 8 0 93696 93704 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas alcaligenes;t__Pseudomonas alcaligenes OT 69 0 68 53 4 0 499 7 139538 140169 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mellifer;t__ 0 0 0 0 0 24 0 2013 2076 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Pseudomonas phage O4;t__ 0 0 0 0 0 0 0 1010 1010 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Rikenella;s__Rikenella microfusus;t__Rikenella microfusus DSM 15922 0 3 0 981 3 0 0 56607 57594 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL312;t__ 0 0 0 0 0 0 0 303 303 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus cleftensis;t__ 0 0 0 0 6 62 0 38938 39006 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus capitis;t__Staphylococcus capitis subsp. capitis 0 0 0 0 0 0 0 1193 1193 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Microcoleaceae;g__Planktothrix;s__Planktothrix agardhii;t__Planktothrix agardhii NIVA-CYA 126/8 0 0 0 0 0 0 0 4964 5198 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia felis;t__Rickettsia felis URRWXCal2 0 0 0 0 0 0 0 2014 2040 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Manzanilla orthobunyavirus;t__Cat Que virus 0 0 0 0 0 0 0 244 244 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv1;o__;f__;g__;s__;t__ 0 1771 0 0 0 0 0 8 1779 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage Fpv20;o__;f__;g__;s__;t__ 0 1678 0 0 0 0 0 120 1798 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Gammaproteobacteria bacterium MFB021;t__ 8 0 153 0 1 0 0 88309 88471 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Jonesiaceae;g__Jonesia;s__Jonesia quinghaiensis;t__Jonesia quinghaiensis DSM 15701 0 0 2 3 0 10 0 60716 60731 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces yerevanensis;t__ 0 0 6 0 4 560 0 217348 217918 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus brockianus;t__ 0 0 2 0 0 0 0 40701 40703 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__Pithovirus;s__Pithovirus sibericum;t__ 0 0 0 0 0 0 0 12200 12200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Mannheimia phage vB_MhS_535AP2;t__ 0 0 0 16 0 0 0 985 1001 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeobacter;s__Phaeobacter gallaeciensis;t__Phaeobacter gallaeciensis DSM 26640 0 0 3 0 262 6 0 75262 75533 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Finn;t__ 0 0 0 0 0 0 0 1003 1003 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fluorescens;t__ 0 0 0 0 0 0 0 1557 1557 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Nostoc;s__Nostoc punctiforme;t__Nostoc punctiforme PCC 73102 0 0 0 0 6 0 0 15790 16490 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Escherichia virus 186;t__ 0 0 0 0 0 4 0 608 612 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium brisbanense;t__ 0 0 0 2 0 0 0 147614 147616 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanicola;s__Oceanicola sp. S124;t__ 0 0 1 0 177 0 0 92172 92350 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris HaA2 0 0 2 1 40 0 8 106582 106633 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage tp310-2;t__ 4 0 0 0 622 21 0 308 955 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus agarilyticus;t__ 0 0 3 0 0 112 0 69308 69423 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium lactosutens;t__Sphingobium lactosutens DS20 79 334 34 32 1190 2098 0 103236 107003 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. RCC307;t__ 0 0 1 9 0 21 0 44467 44498 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__;s__Comamonadaceae bacterium A1;t__ 0 19 28 20 29 0 0 51378 51474 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas haloaromaticamans;t__ 8 4 0 5 11 94 0 95955 96077 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus damnosus;t__ 0 0 0 6 211 14 0 2681 5234 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage NotTheCreek;t__ 0 0 0 0 288 605 0 2345 3238 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium herbicidovorans;t__Sphingobium herbicidovorans NBRC 16415 0 95 38 20 1290 685 0 78406 80534 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. Root483D1;t__ 0 0 0 20 3 65 0 131924 132012 k__Viruses;p__unclassified bacterial viruses;c__Erwinia phage vB_EamM_Caitlin;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 4822 4822 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Halogeometricum;s__Halogeometricum borinquense;t__Halogeometricum borinquense DSM 11551 0 0 0 0 20 0 0 22431 22470 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus puniceus;t__ 2 0 0 0 0 22 0 59415 59439 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Ostreococcus tauri virus 1;t__ 0 0 0 0 885 0 0 2950 3835 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__;f__;g__Deferrisoma;s__Deferrisoma camini;t__Deferrisoma camini S3R1 0 1 0 0 0 0 0 84730 84731 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Dinoroseobacter;s__Dinoroseobacter shibae;t__Dinoroseobacter shibae DFL 12 = DSM 16493 0 0 4 0 77 0 0 75710 75791 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella schoenbuchensis;t__Bartonella schoenbuchensis m07a 0 0 0 0 0 0 0 1224 1224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Muvirus;s__Mannheimia phage vB_MhM_3927AP2;t__ 0 0 0 0 0 0 0 675 675 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Geobacillus phage GBK2;t__ 0 0 0 0 0 0 0 781 781 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage S-PM2;t__ 0 0 0 0 0 0 0 3925 3925 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Herbiconiux;s__Herbiconiux sp. YR403;t__ 1 0 1 2 25 0 0 71972 72001 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces hirsutus;t__ 2 1 12 0 5 2653 0 165872 168545 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia mannitolilytica;t__ 0 6 0 0 4 0 0 3429 3810 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium simulans;t__ 0 0 1 9 0 31 0 54718 54759 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__Hyphomicrobium denitrificans;t__Hyphomicrobium denitrificans ATCC 51888 0 0 0 1 0 49 0 72729 72779 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc carnosum;t__Leuconostoc carnosum JB16 0 0 0 2 0 61 0 2171 2562 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas;s__Zymomonas mobilis;t__Zymomonas mobilis subsp. mobilis 0 0 0 0 0 0 0 2377 2423 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Equid alphaherpesvirus 4;t__ 0 0 0 0 0 0 0 2911 2911 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Chroococcidiopsidales;f__Chroococcidiopsidaceae;g__Chroococcidiopsis;s__Chroococcidiopsis thermalis;t__Chroococcidiopsis thermalis PCC 7203 0 0 0 0 0 0 0 7470 7470 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Pseudolabrys;s__Pseudolabrys sp. Root1462;t__ 0 3 3 7 0 0 0 94720 94733 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrialba;s__Natrialba magadii;t__Natrialba magadii ATCC 43099 0 0 1 0 7 460 0 74569 75037 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes verus polyomavirus 1;t__Pan troglodytes verus polyomavirus 1a 0 0 0 0 0 0 0 106 106 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__Actinobacteria bacterium IMCC26207;t__ 1 0 0 0 0 0 0 66318 66319 k__BacteriaPlasmid;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Streptobacillus;s__Streptobacillus moniliformis;t__Streptobacillus moniliformis DSM 12112 0 0 0 0 0 0 0 214 214 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Enorma;s__Enorma massiliensis;t__Enorma massiliensis phI 87 0 0 0 4 0 0 45113 45204 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 1;t__Bombyx mori densovirus 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Shigella phage pSf-1;t__ 0 0 0 0 0 0 0 1036 1036 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Vaccinia virus;t__ 0 0 0 0 0 1114 0 2780 3894 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Thermopetrobacter;s__Thermopetrobacter sp. TC1;t__ 0 1 1 0 0 0 0 52084 52086 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage vB_CpeS-CP51;t__ 0 0 0 0 0 0 0 782 782 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum yellow vein Yunnan virus satellite DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Alloscardovia;s__Alloscardovia criceti;t__Alloscardovia criceti DSM 17774 0 0 10 0 26 48 0 37591 37675 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium lindaniclasticum;t__Novosphingobium lindaniclasticum LE124 60 2 0 14 1144 110 0 95538 96868 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azoarcus;s__Azoarcus toluclasticus;t__Azoarcus toluclasticus ATCC 700605 0 4 8 0 50 18 0 118323 118403 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella cibaria;t__ 1 0 18 20 11 0 0 49289 49339 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Macavirus;s__Alcelaphine gammaherpesvirus 1;t__ 0 0 0 0 0 0 0 2612 2612 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Laguna betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium matruchotii;t__Corynebacterium matruchotii ATCC 14266 0 0 0 0 0 18 0 57089 57107 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Prochlorococcus phage Syn1;t__ 0 0 0 1 0 0 0 3822 3823 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Leucania separata nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 3360 3360 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL285;t__ 0 0 0 0 0 191 0 519 710 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Diatraea saccharalis granulovirus;t__ 0 0 0 0 0 0 0 1967 1967 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium pasteurianum;t__Clostridium pasteurianum BC1 0 0 0 0 0 0 0 1002 1067 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage SpaA1;t__ 0 0 0 0 0 0 0 855 855 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium rhizogenes;t__ 0 0 1 7 82 4 16 155306 155416 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus P108;t__Staphylococcus phage P108 0 0 0 0 0 1581 0 1235 2816 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium sputi;t__Corynebacterium sputi DSM 45148 2 0 29 2 0 42 0 58184 58261 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage Dp-1;t__ 0 0 0 0 0 0 0 1130 1130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Phaeovirus;s__Feldmannia species virus;t__ 0 0 0 0 0 0 0 3092 3092 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malachra yellow vein mosaic betasatellite;t__ 0 0 0 0 0 15 0 12 27 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas fulva;t__Pseudomonas fulva 12-X 0 0 15 0 0 196 0 98204 98415 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterococcus phage EFLK1;t__ 0 0 0 0 0 0 0 2619 2619 k__BacteriaPlasmid;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Selenomonas;s__Selenomonas ruminantium;t__Selenomonas ruminantium subsp. lactilytica 0 0 0 0 0 0 0 12422 12549 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium subtile;t__ 63 0 1 0 2 273 0 55413 55752 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia autotrophica;t__ 0 0 24 0 0 0 0 116514 116538 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiMR25;t__ 0 0 0 0 25 554 0 307 886 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Plutella xylostella granulovirus;t__ 0 0 0 0 0 0 0 2019 2019 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Porcine parvovirus 5;t__ 0 0 0 0 2 0 0 114 116 k__Viruses;p__unclassified bacterial viruses;c__Sodalis phage phiSG1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 1043 1043 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014i;t__ 0 0 0 0 2 1 0 3812 3815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp220virus;s__Campylobacter virus CP220;t__ 0 0 0 0 0 0 0 3550 3550 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidocella;s__Acidocella aminolytica;t__Acidocella aminolytica 101 = DSM 11237 0 0 2 0 7 0 0 78750 78761 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Switchgrass mosaic-associated virus 1;t__ 0 0 0 0 0 0 0 54 54 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella marshii;t__Prevotella marshii DSM 16973 = JCM 13450 0 5 0 188 10 713 0 49277 50193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage TP-778L;t__ 13 0 0 0 110 84 0 628 835 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Streptococcus phage T12;t__ 0 0 0 13 0 1 0 745 759 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Streptococcus phage EJ-1;t__ 0 0 0 0 0 0 0 858 858 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter litoralis;t__Roseobacter litoralis Och 149 0 0 0 0 0 1 0 4711 4801 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium album;t__Brevibacterium album DSM 18261 0 0 2 1 0 11 0 81798 81812 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus kodakarensis;t__Thermococcus kodakarensis KOD1 0 0 0 0 7 1 0 41766 41774 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium foliorum;t__ 0 0 0 0 6 125 0 70951 71082 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Elderberry carlavirus B;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Thetatorquevirus;s__Torque teno canis virus;t__ 0 0 0 0 0 0 0 55 55 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__Reyranella;s__Reyranella massiliensis;t__Reyranella massiliensis 521 0 0 40 1 0 0 0 115308 115349 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Twortvirus;s__Staphylococcus phage Twort;t__ 0 0 0 0 0 0 0 2614 2614 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Ostreococcus lucimarinus virus OlV5;t__ 0 33 0 0 0 0 0 3696 3729 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus salivarius;t__Lactobacillus salivarius UCC118 0 0 0 0 0 11 0 5925 6133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus S25-4;t__Staphylococcus phage S25-4 0 0 0 0 0 2139 0 503 2642 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium botulinum;t__Clostridium botulinum A 0 0 0 0 0 0 0 326 326 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__;g__Candidatus Azobacteroides;s__Candidatus Azobacteroides pseudotrichonymphae;t__Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 0 0 0 0 0 0 0 2165 2208 k__Archaea;p__Euryarchaeota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanomicrobiaceae;g__Methanofollis;s__Methanofollis liminatans;t__Methanofollis liminatans DSM 4140 0 0 0 0 5 0 0 49473 49478 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp220virus;s__Campylobacter virus CPt10;t__ 0 0 0 0 0 749 0 2765 3514 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Saimiriine betaherpesvirus 4;t__ 0 0 0 0 0 0 0 3933 3933 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Escherichia phage EB49;t__ 0 0 0 0 0 4 0 939 943 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Paucibacter;s__Paucibacter sp. KCTC 42545;t__ 0 0 38 69 39 0 0 103237 103383 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sitaravirus;s__Paenibacillus virus Rani;t__Paenibacillus phage Rani 0 0 0 398 93 176 0 92 759 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__;s__Tokyovirus A1;t__ 0 0 0 0 0 0 0 7454 7454 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage henriette 12B8;t__ 0 0 0 0 0 0 0 2144 2144 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermatophilaceae;g__Mobilicoccus;s__Mobilicoccus sp. SIT2;t__ 0 0 8 15 0 49 0 76723 76795 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium amethystogenes;t__ 1 0 12 3 6 0 0 188372 188394 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Pipapillomavirus;s__Apodemus sylvaticus papillomavirus 1;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCD481-1;t__ 0 0 0 3 272 47 0 334 656 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bc431virus;s__Bacillus virus Bcp1;t__Bacillus phage Bcp1 0 0 0 0 0 0 0 3055 3055 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Coccolithovirus;s__Emiliania huxleyi virus 86;t__ 0 0 0 0 0 0 0 8146 8146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus G;t__Simian adenovirus 20 0 0 0 0 0 0 0 686 686 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage SageFayge;t__ 0 0 0 0 1398 525 0 1324 3247 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Eidolon polyomavirus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Rattus norvegicus polyomavirus 1;t__ 0 0 0 0 0 0 0 106 106 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina barkeri;t__Methanosarcina barkeri MS 0 0 0 0 0 0 0 782 833 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Coxiellaceae;g__Coxiella;s__Coxiella burnetii;t__Coxiella burnetii RSA 493 0 0 0 0 0 0 416 330 746 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage X29;t__ 0 0 0 0 0 0 0 831 831 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Parascardovia;s__Parascardovia denticolens;t__Parascardovia denticolens DSM 10105 = JCM 12538 0 0 0 0 0 0 0 37817 37817 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum aidingense;t__Halorubrum aidingense JCM 13560 0 0 96 3 2 109 0 61892 62102 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus horikoshii;t__Pyrococcus horikoshii OT3 0 0 0 0 0 64 0 34706 34770 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage phiLC3;t__ 0 0 0 0 0 164 0 479 643 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P12024virus;s__Nonlabens virus P12024L;t__Nonlabens phage P12024L 0 0 0 0 0 0 0 713 713 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0468-1;o__;f__;g__;s__;t__ 4 789 0 0 0 0 0 28 821 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Clostridium phage phiCT9441A;t__ 0 0 0 0 0 0 0 937 937 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Secunda5virus;s__Stenotrophomonas virus IME13;t__Stenotrophomonas phage IME13 0 0 0 0 284 450 0 2512 3246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Anticarsia gemmatalis multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 1902 0 735 2637 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Flavobacterium phage 11b;t__ 0 0 0 0 0 0 0 720 720 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Variola virus;t__ 0 0 0 0 0 695 0 3016 3711 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pelagibacter phage HTVC008M;t__ 0 0 0 0 0 0 0 2945 2945 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage M102;t__ 0 0 0 0 0 0 0 622 622 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium kluyveri;t__Clostridium kluyveri DSM 555 0 0 0 0 0 0 0 1170 1183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014b;t__ 1 0 0 7 39 71 0 3335 3453 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phi3626;t__ 0 0 0 0 0 0 0 670 670 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__Citrobacter freundii;t__Citrobacter freundii CFNIH1 0 0 0 1338 1331 0 0 1643 5445 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage APCM01;t__ 0 0 0 0 0 2 0 619 621 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Tsarbombavirus;s__Bacillus virus TsarBomba;t__Bacillus phage TsarBomba 0 0 0 0 0 0 0 3249 3249 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Shayang Spider Virus 1;t__ 0 0 0 0 0 0 0 401 401 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Lymphocystivirus;s__Lymphocystis disease virus 1;t__ 0 0 0 0 0 0 0 2053 2053 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Proteus phage vB_PmiM_Pm5461;t__ 0 0 0 0 0 0 0 3239 3239 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Okra enation leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Amoebophilaceae;g__Candidatus Cardinium;s__Cardinium endosymbiont of Encarsia pergandiella;t__Cardinium endosymbiont cEper1 of Encarsia pergandiella 0 0 0 0 0 0 0 987 1152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus 712;t__ 0 0 0 0 0 93 0 517 610 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Kotonkan ephemerovirus;t__Kotonkan virus 0 0 0 0 0 0 0 317 317 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia sprentiae;t__Paraburkholderia sprentiae WSM5005 0 0 0 0 0 0 0 30411 30522 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Alphapartitivirus;s__Rosellinia necatrix partitivirus 2;t__ 0 0 0 0 0 0 0 74 74 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aurantimonas;s__Aurantimonas sp. Leaf443;t__ 0 0 1 9 89 0 0 78039 78138 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. Leaf456;t__ 0 2 0 6 1 1489 0 109964 111462 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus soli Cha et al. 2016;t__ 1 0 0 0 0 1241 0 63497 64739 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf11;t__ 0 0 1 3 2 48 0 75250 75304 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sp. PH10;t__ 5 1 11 0 0 0 0 96090 96107 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus taiwanensis;t__Cupriavidus taiwanensis LMG 19424 0 1 3 29 128 0 0 118223 118384 k__Bacteria;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Thermithiobacillaceae;g__Thermithiobacillus;s__Thermithiobacillus tepidarius;t__Thermithiobacillus tepidarius DSM 3134 0 19 0 0 0 0 0 59064 59083 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora viridis;t__Saccharomonospora viridis DSM 43017 1 0 16 0 14 0 0 86135 86166 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium ummariense;t__Sphingobium ummariense RL-3 152 179 166 32 1152 3772 0 89360 94813 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Hyphomicrobium;s__Hyphomicrobium nitrativorans;t__Hyphomicrobium nitrativorans NL23 0 1 0 1 3 31 0 73040 73076 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium diazoefficiens;t__Bradyrhizobium diazoefficiens USDA 110 0 0 0 8 10 1536 0 180562 182116 k__Viruses;p__unclassified bacterial viruses;c__Geobacillus virus E2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 817 817 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. APR13;t__ 0 0 0 0 0 0 0 2761 2787 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter lovleyi;t__Geobacter lovleyi SZ 0 0 3 22 0 21 0 78309 78355 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Komagataeibacter;s__Komagataeibacter xylinus;t__Komagataeibacter xylinus E25 0 0 0 0 64 0 0 8547 9139 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Abalone shriveling syndrome-associated virus;t__ 0 0 0 0 0 0 0 699 699 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiJB;t__ 0 0 0 0 270 548 0 42 860 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Hydrocarboniphaga;s__Hydrocarboniphaga effusa;t__Hydrocarboniphaga effusa AP103 0 0 0 0 0 0 0 103873 103873 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava indica;t__ 0 0 1 0 18 23 0 76198 76240 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus yayanosii;t__Pyrococcus yayanosii CH1 0 0 0 0 5 55 0 34276 34336 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Chitinimonas;s__Chitinimonas koreensis;t__Chitinimonas koreensis DSM 17726 0 0 5 0 0 0 0 111380 111385 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Leaf141;t__ 1 0 1 4 117 5 0 86512 86640 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Curvibacter;s__Curvibacter sp. PAE-UM;t__ 0 11 0 20 172 0 0 72376 72579 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces clavuligerus;t__Streptomyces clavuligerus ATCC 27064 0 0 16 0 4 491 461 133283 134255 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sedimentitalea;s__Sedimentitalea nanhaiensis;t__Sedimentitalea nanhaiensis DSM 24252 0 0 1 1 1284 0 0 97585 98871 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia kroppenstedtii;t__Gordonia kroppenstedtii DSM 45133 0 0 2 17 0 17 0 84378 84414 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces pathocidini;t__ 0 0 4 0 4 249 0 109120 109377 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia sp. Cc1.17;t__ 0 0 0 0 0 1 0 166827 166828 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Vulcanisaeta;s__Vulcanisaeta moutnovskia;t__Vulcanisaeta moutnovskia 768-28 0 0 0 0 0 29 0 45950 45979 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter wandonensis;t__ 0 0 2 0 2 0 0 77662 77666 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassospira;s__Thalassospira xiamenensis;t__Thalassospira xiamenensis M-5 = DSM 17429 0 0 0 0 0 0 0 3826 3847 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter litoralis;t__Erythrobacter litoralis HTCC2594 0 53 0 1064 15 653 0 59262 61047 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus epidermidis;t__Staphylococcus epidermidis ATCC 12228 0 0 0 0 0 0 0 1176 1296 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium neotropicale;t__ 0 0 0 12 26 218 0 172893 173149 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptoclostridium;s__Peptoclostridium litorale;t__Peptoclostridium litorale DSM 5388 0 0 0 0 0 0 0 557 557 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage LP-030-3;t__ 0 0 0 0 1 217 0 605 823 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. MJM8645;t__ 0 0 317 0 90 962 0 183312 184681 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Kaistia;s__Kaistia adipata;t__Kaistia adipata DSM 17808 0 0 3 29 1 0 0 96670 96703 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella aerofaciens;t__Collinsella aerofaciens ATCC 25986 0 0 1 4 0 0 0 48747 48752 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium choerinum;t__ 0 0 11 0 0 19 0 41857 41887 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__;s__Comamonadaceae bacterium B1;t__ 0 46 0 10 45 527 0 51509 52137 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia carnea;t__Nocardia carnea NBRC 14403 0 0 7 13 12 147 0 149437 149626 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium falsenii;t__Corynebacterium falsenii DSM 44353 0 0 104 10 0 182 0 53244 53540 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces olivaceus;t__ 1 0 5 0 1 1641 0 169687 171335 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria pomeroyi;t__Ruegeria pomeroyi DSS-3 0 1 1 0 110 10 0 91897 92019 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__Rothia dentocariosa;t__ 71 0 3 4 5 0 0 52649 52732 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Luteibacter;s__Luteibacter sp. 9133;t__ 0 0 4 20 50 40 0 89909 90023 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium amycolatum;t__Corynebacterium amycolatum SK46 41 0 8 8 0 30 0 50099 50186 k__Bacteria;p__Chloroflexi;c__Dehalococcoidia;o__Dehalococcoidales;f__Dehalococcoidaceae;g__Dehalococcoides;s__Dehalococcoides mccartyi;t__Dehalococcoides mccartyi 195 0 0 0 0 0 0 0 29394 29394 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aurantimonas;s__Aurantimonas manganoxydans;t__Aurantimonas manganoxydans SI85-9A1 0 11 41 47 6 0 0 86337 86442 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas johnsonii;t__Hyphomonas johnsonii MHS-2 0 0 2 0 0 33 0 72304 72339 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage YMC-2011;t__ 0 0 0 0 0 0 0 815 815 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Brucellaceae;g__Brucella;s__Brucella melitensis;t__Brucella melitensis bv. 1 0 1 1 54 58 0 0 65781 65895 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Groundnut ringspot and Tomato chlorotic spot virus reassortant;t__ 0 0 0 0 0 0 0 332 332 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan coneheads virus 1;t__ 0 0 0 0 0 0 0 203 203 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. WG;t__ 1 0 0 2 3 214 0 80356 80576 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__marine actinobacterium PHSC20C1;t__ 0 0 182 0 0 0 0 55155 55337 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium amorphae;t__Mesorhizobium amorphae CCNWGS0123 0 0 0 26 0 103 0 125236 125365 k__BacteriaPlasmid;p__Bacteroidetes;c__Saprospiria;o__Saprospirales;f__Saprospiraceae;g__Saprospira;s__Saprospira grandis;t__Saprospira grandis str. Lewin 0 0 0 0 0 0 0 1098 1098 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Nitratireductor;s__Nitratireductor pacificus;t__Nitratireductor pacificus pht-3B 0 4 1 23 1 0 0 89200 89229 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium smegmatis;t__Mycobacterium smegmatis str. MC2 155 0 0 3 5 0 121 0 139598 139764 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Macavirus;s__Alcelaphine gammaherpesvirus 2;t__ 0 0 0 0 0 0 0 2741 2741 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Nitratireductor;s__Nitratireductor basaltis;t__ 1 0 4 16 6 10 0 70990 71027 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pannonibacter;s__Pannonibacter phragmitetus;t__ 0 0 0 0 0 0 0 6815 7020 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. 155;t__ 0 0 0 5 0 171 0 92016 92192 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Oligotropha;s__Oligotropha carboxidovorans;t__Oligotropha carboxidovorans OM5 0 0 0 0 0 0 0 5833 6004 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phifelvirus;s__Enterococcus virus FL2;t__Enterococcus phage phiFL2A 0 0 0 0 6 551 0 168 725 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Kimberley ephemerovirus;t__Kimberley virus 0 0 0 0 0 0 0 308 308 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Lymantria dispar multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 3220 3220 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage vB_LmoS_188;t__ 0 0 0 0 0 232 0 535 767 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces humi;t__ 0 0 0 0 0 220 0 199660 199880 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Vernonia yellow vein Fujian virus betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Honeysuckle yellow vein Japan betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterococcus phage phiEF24C;t__ 0 0 0 0 0 0 0 2841 2841 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas phage PX29;t__ 0 0 0 0 0 1 0 4439 4440 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage Pavlov;t__ 0 0 0 0 342 0 0 458 800 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Sucra jujuba nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2719 2719 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. PR-M31;t__ 0 0 9 10 8 20 0 75853 75900 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium singulare;t__ 130 0 38 7 0 1312 0 55123 56610 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus sanfranciscensis;t__Lactobacillus sanfranciscensis TMW 1.1304 0 0 0 0 0 4 0 1258 1547 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Chelativorans;s__Chelativorans sp. BNC1;t__ 0 0 33 27 21 0 0 88167 88248 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Iridovirus;s__Invertebrate iridovirus 25;t__ 0 0 0 0 0 10 0 4086 4096 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Martelella;s__Martelella mediterranea;t__Martelella mediterranea DSM 17316 0 0 249 22 0 74 0 112389 112734 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium biavatii;t__Bifidobacterium biavatii DSM 23969 28 0 2 0 2 252 0 64656 64940 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Rhizobacter;s__Rhizobacter sp. Root1221;t__ 0 0 4 20 38 4 0 137074 137140 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter litoralis;t__ 0 1 0 6 23 15 0 64982 65027 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__;g__Exiguobacterium;s__Exiguobacterium sibiricum;t__Exiguobacterium sibiricum 255-15 0 0 0 0 0 0 0 131 131 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-IOM18;t__ 0 0 0 0 0 4 0 3431 3435 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage Ec-ZZ2;t__ 0 0 0 0 0 395 0 428 823 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cd119virus;s__Clostridium virus phiCD119;t__ 0 0 0 0 0 69 0 997 1066 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus halophilus;t__ 0 30 8 0 221 168 0 79606 80033 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Sodalis;s__Sodalis praecaptivus;t__ 0 0 0 0 0 0 0 8997 8997 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli;t__Escherichia coli O157:H7 0 0 0 0 0 0 0 1801 1918 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Turkey parvovirus 1078;t__ 0 0 0 0 0 0 0 92 92 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Aminobacter;s__Aminobacter sp. Root100;t__ 0 0 165 24 101 0 0 104432 104722 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium aesculapii;t__ 150 0 0 0 0 30 0 53516 53696 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus ficus;t__Deinococcus ficus DSM 19119 0 0 0 0 0 14 0 82806 82820 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StauST398-2;t__ 0 0 0 0 471 115 0 325 911 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinotignum;s__Actinotignum schaalii;t__ 0 0 5 0 22 0 0 43159 43186 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio tubiashii;t__Vibrio tubiashii ATCC 19109 0 0 5 0 0 0 0 9378 9579 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Hydrogenophilales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus denitrificans;t__Thiobacillus denitrificans DSM 12475 0 38 310 0 0 50 135 71597 72130 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__;s__Clostridiales bacterium NK3B98;t__ 0 5 0 7 0 0 0 60411 60423 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptococcaceae;g__Desulfosporosinus;s__Desulfosporosinus acidiphilus;t__Desulfosporosinus acidiphilus SJ4 0 0 0 0 0 0 0 1284 1284 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Nostocaceae;g__Anabaena;s__Anabaena sp. 90;t__ 0 0 0 0 0 0 0 2937 3125 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Sinobacteraceae;g__Nevskia;s__Nevskia soli;t__Nevskia soli DSM 19509 0 0 3 0 13 0 0 115395 115411 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage 47;t__ 0 0 0 0 101 664 0 130 895 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus phage D4410;t__ 0 0 0 0 0 346 0 110 456 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. SRS2;t__ 44 42 4 1 17 32 0 92179 92319 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Iris yellow spot orthotospovirus;t__Iris yellow spot virus 0 0 0 0 0 0 0 332 332 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter citreus;t__Erythrobacter citreus LAMA 915 0 0 0 0 0 0 0 61843 61843 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Evoli;t__ 0 0 0 0 842 0 0 2351 3193 k__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus contaminans;t__Alicyclobacillus contaminans DSM 17975 0 0 0 1 0 6 0 65213 65220 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;t__ 0 0 3 211 13 11 0 52254 52492 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-RSM4;t__ 0 0 0 0 0 2 0 3526 3528 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Cinara cedri) 0 0 0 0 0 0 0 121 121 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Novirhabdovirus;s__Snakehead novirhabdovirus;t__Snakehead virus 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Novirhabdovirus;s__Hirame novirhabdovirus;t__Hirame rhabdovirus 0 0 0 0 0 0 0 220 220 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomassiliicoccaceae;g__Methanomassiliicoccus;s__Methanomassiliicoccus luminyensis;t__Methanomassiliicoccus luminyensis B10 0 0 0 0 0 2 0 52355 52357 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Komagataeibacter;s__Komagataeibacter medellinensis;t__Komagataeibacter medellinensis NBRC 3288 0 0 0 0 240 542 0 6238 7515 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Caenimonas;s__Caenimonas sp. SL110;t__ 0 0 0 2 0 0 0 94278 94280 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Kozakia;s__Kozakia baliensis;t__ 0 0 0 0 0 0 0 11835 12342 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan horsefly Virus;t__ 0 0 0 0 0 0 0 313 313 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium minutissimum;t__ 0 0 0 2 0 616 0 52579 53197 k__Bacteria;p__Deferribacteres;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Geovibrio;s__Geovibrio sp. L21-Ace-BES;t__ 0 0 0 0 0 0 0 59425 59425 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Epiphyas postvittana nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2371 2371 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Neisseriales;f__Chromobacteriaceae;g__Leeia;s__Leeia oryzae;t__Leeia oryzae DSM 17879 0 0 7 0 4 0 0 75653 75664 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StB27;t__ 0 0 0 0 0 0 0 801 801 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Acidianus filamentous virus 6;t__ 0 0 0 0 0 0 0 791 791 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sandarakinorhabdus;s__Sandarakinorhabdus limnophila;t__Sandarakinorhabdus limnophila DSM 17366 0 0 3 0 6 36 0 52211 52256 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aureimonas;s__Aureimonas sp. Leaf454;t__ 0 0 0 0 0 0 0 95900 95900 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Saimiriine gammaherpesvirus 2;t__ 0 0 0 0 0 0 0 2258 2258 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas stutzeri;t__ 0 632 116 41 0 730 0 89439 90958 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Epinotia aporema granulovirus;t__ 0 0 0 0 0 0 0 2381 2381 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloquadratum;s__Haloquadratum walsbyi;t__Haloquadratum walsbyi C23 0 0 0 0 0 0 0 2244 2244 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia sp. BMG51109;t__ 0 0 15 14 1 34 0 175690 175754 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wuhan centipede virus;t__ 0 0 0 0 0 0 0 473 473 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe heteroptera virus 3;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__dsDNA viruses, no RNA stage;c__Marseilleviridae;o__;f__;g__Marseillevirus;s__Brazilian marseillevirus;t__ 0 0 0 0 0 0 0 7245 7245 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloquadratum;s__Haloquadratum walsbyi;t__Haloquadratum walsbyi C23 0 0 0 1 0 0 0 62959 62960 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Riesia;s__Candidatus Riesia pediculischaeffi;t__Candidatus Riesia pediculischaeffi PTSU 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus phage 812;t__ 0 0 0 0 28 2730 0 83 2841 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Spo1virus;s__Listeria phage vB_LmoM_AG20;t__ 0 0 0 0 0 0 0 2661 2661 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Epsilon15virus;s__Escherichia phage TL-2011b;t__ 0 0 0 0 0 81 0 814 895 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage PBECO 4;t__ 0 0 0 0 0 0 0 6962 6962 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Yersinia phage phiR1-37;t__ 0 0 0 0 0 0 0 5247 5247 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Curly;t__ 0 0 0 0 0 381 0 607 988 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium freneyi;t__Corynebacterium freneyi DNF00450 226 0 44 6 0 586 0 59779 60641 k__Viruses;p__unclassified bacterial viruses;c__Enterococcus phage EF62phi;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 610 610 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium punctulatus;t__Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 0 0 0 0 0 0 0 76 76 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus Bibb29;t__ 0 0 0 0 0 54 0 532 586 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-SSM5;t__ 0 0 0 0 0 1 0 3522 3523 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__Olsenella scatoligenes;t__ 0 0 0 0 1 2 0 49360 49363 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Brachybacterium;s__Brachybacterium faecium;t__Brachybacterium faecium DSM 4810 0 0 6 28 24 50 0 72191 72299 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage A006;t__ 0 0 0 0 0 139 0 623 762 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria acuminata;t__Oscillatoria acuminata PCC 6304 0 0 0 0 0 0 0 2262 2294 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium gallicum;t__Bifidobacterium gallicum DSM 20093 = LMG 11596 0 0 1 0 1 13 0 40056 40071 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus virus Ragged Hills;t__ 0 0 0 0 0 0 0 329 329 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Cryptophlebia leucotreta granulovirus;t__ 0 0 0 0 0 0 0 2218 2218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Wild onion symptomless virus;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Scallion mosaic virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Brevibacillus phage Sundance;t__ 0 0 0 0 0 0 0 2685 2685 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella sp. 3ANDIMAR09;t__ 0 0 0 0 369 292 0 72843 73504 k__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Leuconostoc;s__Leuconostoc fallax;t__Leuconostoc fallax KCTC 3537 0 0 1 50 4 49 0 32618 32722 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp. TRP;t__ 2 0 1 0 58 138 0 77881 78080 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus aminophilus;t__Paracoccus aminophilus JCM 7686 0 0 0 0 0 0 0 24933 25179 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Aminobacter;s__Aminobacter sp. J41;t__ 0 0 24 34 16 0 0 84395 84469 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Yersinia;s__Yersinia enterocolitica;t__Yersinia enterocolitica subsp. enterocolitica 0 0 0 0 0 0 0 1302 1354 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__;s__Comamonadaceae bacterium URHA0028;t__ 0 0 1 14 16 0 0 98021 98052 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Tepovirus;s__Prunus virus T;t__ 0 0 0 0 0 0 0 136 136 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium;s__Atopobium minutum;t__ 152 377 0 0 4 5 0 33767 34305 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Vespertiliovirus;s__Spiroplasma virus C74;t__Spiroplasma phage 1-C74 0 0 0 0 0 9 0 146 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_Kwan;t__ 0 0 0 0 0 0 0 4927 4927 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Macacine gammaherpesvirus 5;t__ 0 0 0 0 0 0 0 2674 2674 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium capsulatum;t__Novosphingobium capsulatum NBRC 12533 0 0 0 5 1199 2 0 95389 96595 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter pasteurianus;t__Acetobacter pasteurianus subsp. pasteurianus 0 0 0 0 14 0 0 6679 8646 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermatophilaceae;g__Dermatophilus;s__Dermatophilus congolensis;t__Dermatophilus congolensis DSM 44180 = NBRC 105199 2 0 5 6 1 0 0 52318 52332 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. NBIMC_P2-C3;t__ 0 0 5 164 0 63986 0 46613 110768 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Biseptimavirus;s__Staphylococcus phage 77;t__ 0 0 0 0 487 0 0 347 834 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Glutamicibacter;s__Glutamicibacter halophytocola;t__ 3 0 16 32 210 235 0 77739 78235 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Cowpea mild mottle virus;t__ 0 0 0 0 0 0 0 162 162 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Yersiniaceae;g__Serratia;s__Serratia liquefaciens;t__Serratia liquefaciens ATCC 27592 0 0 0 0 0 0 0 725 882 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P1virus;s__Escherichia virus P1;t__ 0 0 0 0 0 0 0 1895 1895 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Micromonas sp. RCC1109 virus MpV1;t__ 0 0 0 0 0 0 0 3681 3681 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Listeria phage LMTA-148;t__ 0 0 0 0 1431 368 0 851 2650 k__Viruses;p__unclassified virophages;c__Yellowstone Lake virophage 7;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 463 463 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Leopards Hill virus;t__ 0 0 0 0 0 0 0 363 363 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis japonica;t__ 0 0 0 0 0 0 0 1850 1850 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7002;t__ 0 0 0 0 0 0 0 7999 8028 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phrux;t__ 0 0 0 0 1344 54 0 96 1494 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Simkaniaceae;g__Simkania;s__Simkania negevensis;t__Simkania negevensis Z 0 0 0 0 0 0 0 2575 2640 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiMMP01;t__ 0 0 0 0 466 122 0 301 889 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Desulfurococcus;s__Desulfurococcus mucosus;t__Desulfurococcus mucosus DSM 2162 0 0 0 0 7 0 0 26285 26292 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-39;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 64 64 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. Root157;t__ 0 0 3 18 7 28 0 83687 83743 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas;s__Zymomonas mobilis;t__Zymomonas mobilis subsp. pomaceae 0 0 0 0 0 0 0 1414 1429 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Phikzvirus;s__Pseudomonas phage phiKZ;t__ 0 0 0 0 0 0 0 5606 5606 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cc31virus;s__Enterobacter virus CC31;t__Enterobacter phage CC31 0 0 0 0 0 288 0 3022 3310 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Sulfuritalea;s__Sulfuritalea hydrogenivorans;t__Sulfuritalea hydrogenivorans sk43H 1 1 15 0 8 0 0 76027 76052 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cellulophaga phage phi46:1;t__ 0 0 0 0 0 0 0 696 696 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Bovine atadenovirus D;t__ 0 0 0 0 0 0 0 626 626 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Spodoptera litura nucleopolyhedrovirus II;t__ 0 0 0 0 0 1 0 2971 2972 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer adhaerens;t__ 0 0 0 0 0 0 0 63416 63923 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage SSU5;t__ 0 0 0 0 0 0 0 2065 2065 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium vitaeruminis;t__Corynebacterium vitaeruminis DSM 20294 0 0 22 19 0 154 0 58440 58635 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Periplaneta americana);t__Blattabacterium sp. (Periplaneta americana) str. BPLAN 0 0 0 0 0 0 0 68 68 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium glutamicum;t__Corynebacterium glutamicum ATCC 13032 0 0 8 12 0 766 0 65402 66188 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage c-st;t__ 0 0 0 0 0 0 0 3713 3713 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicibacter;s__Tropicibacter naphthalenivorans;t__ 118 39 7 0 375 0 0 88581 89120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Thermus phage TMA;t__ 0 0 0 0 0 1072 0 1957 3029 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Nauphoeta cinerea);t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Punta Toro phlebovirus;t__Punta Toro virus 0 0 0 0 0 0 0 249 249 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Tomato zonate spot virus;t__ 0 0 0 0 0 0 0 339 339 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Bovine adenovirus E;t__Bovine adenovirus 6 0 0 0 0 0 0 0 600 600 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus prophage phiPV83;t__ 0 0 0 0 22 0 0 890 912 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae LDMD-2013b;t__Circoviridae 18 LDMD-2013 0 0 0 0 0 0 0 56 56 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. Leaf399;t__ 0 0 1 6 1 100 0 88958 89066 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage JS01;t__ 18 0 0 0 226 418 0 207 869 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Henipavirus;s__Nipah henipavirus;t__ 0 0 0 0 0 0 0 364 364 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__;s__Acetobacteraceae bacterium AT-5844;t__ 0 0 0 0 4 0 0 103309 103313 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Erectites yellow mosaic virus satellite DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Oligotropha;s__Oligotropha carboxidovorans;t__Oligotropha carboxidovorans OM5 0 0 1 0 30 0 0 71883 71914 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Sandfly fever Sicilian virus;t__Sandfly fever Turkey virus 0 0 0 0 0 0 0 248 248 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei chuvirus-like virus 1;t__ 0 0 0 0 0 0 0 214 214 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium baderi;t__Sphingobium baderi LL03 161 262 2 32 1950 4858 0 89530 96795 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage IME_EF3;t__ 0 0 0 0 0 10 0 823 833 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Aliivibrio;s__Aliivibrio fischeri;t__Vibrio fischeri ES114 0 0 0 0 0 0 0 916 916 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria conchae;t__ 1 0 0 0 29 0 0 89725 89755 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Acidianus rod-shaped virus 1;t__ 0 0 0 0 0 0 0 493 493 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 15;t__ 0 0 0 0 0 0 0 147 147 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia brevicatena;t__Nocardia brevicatena NBRC 12119 57 0 4 9 7 311 0 139281 139669 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides salanitronis;t__Bacteroides salanitronis DSM 18170 0 0 0 0 0 0 0 1284 1312 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tlsvirus;s__Escherichia virus TLS;t__ 0 0 0 0 0 0 0 998 998 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage PVL;t__ 0 0 0 0 220 338 0 270 828 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces scabiei;t__Streptomyces scabiei 87.22 2 0 7 0 6 2851 0 200107 202973 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus celericrescens;t__ 0 0 0 0 11 17 0 46580 46608 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cellulophaga phage phi19:1;t__ 0 0 0 3 0 0 0 1145 1148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage 36;t__ 0 0 0 0 38 0 0 783 821 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Glycomycetales;f__Glycomycetaceae;g__Haloglycomyces;s__Haloglycomyces albus;t__Haloglycomyces albus DSM 45210 2 0 14 0 0 0 0 70692 70708 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Microvirga;s__Microvirga flocculans;t__Microvirga flocculans ATCC BAA-817 0 0 0 6 1 14 0 80518 80539 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces curacoi;t__ 0 0 2 0 0 5 0 167927 167934 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Oryza sativa alphaendornavirus;t__ 0 0 0 0 0 0 0 279 279 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus C;t__ 0 0 0 0 0 0 718 0 718 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus C;t__Human adenovirus 2 0 0 0 0 0 0 198 520 718 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi11virus;s__Streptococcus phage 2972;t__ 14 0 0 0 75 13 0 592 694 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Menangle rubulavirus;t__Menangle virus 0 0 0 0 0 0 0 310 310 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 4;t__ 0 0 0 0 0 0 0 55 55 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium cuniculi;t__ 0 0 2 0 1 17 0 50533 50553 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus parabuchneri;t__ 0 0 0 0 0 2 0 1460 2518 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Proboscivirus;s__Elephantid betaherpesvirus 1;t__ 0 0 0 0 0 0 0 3608 3608 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Meleagrid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 3183 3183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage A2;t__ 0 0 0 0 0 2 0 866 868 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium neoaurum;t__Mycobacterium neoaurum VKM Ac-1815D 0 0 2 3 0 116 0 108304 108425 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium setense;t__ 0 0 1 5 0 381 0 124875 125262 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium marinum;t__Mycobacterium marinum E11 0 0 0 0 0 79 0 126646 126725 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-SSM4;t__ 0 0 0 0 0 1 0 3655 3656 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Thalassospira;s__Thalassospira xiamenensis;t__Thalassospira xiamenensis M-5 = DSM 17429 0 4 61 4 3 303 0 91156 91531 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Pantoea;s__Pantoea agglomerans;t__ 0 0 0 0 0 0 0 18587 18660 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Megabat bufavirus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Dichorhavirus;s__Orchid fleck dichorhavirus;t__ 0 0 0 0 0 0 0 246 246 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroflexus;s__Chloroflexus aggregans;t__Chloroflexus aggregans DSM 9485 0 0 0 4 0 0 0 93694 93698 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Ferrimonadaceae;g__Ferrimonas;s__Ferrimonas kyonanensis;t__Ferrimonas kyonanensis DSM 18153 0 0 1 0 0 13 0 98250 98264 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Clostridium phage phiCT19406C;t__ 0 0 0 0 0 0 0 714 714 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium nitrogenifigens;t__Novosphingobium nitrogenifigens DSM 19370 0 0 1 13 217 16 0 82568 82815 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter longus;t__ 0 0 2 1 6 10 0 71997 72016 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phi5967PVL;t__ 20 0 0 0 304 296 0 229 849 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp. J55;t__ 0 0 16 0 30 822 0 84846 85714 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus AvesoBmore;t__Bacillus phage AvesoBmore 0 0 0 0 1121 1337 0 890 3348 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Murine leukemia virus;t__Moloney murine leukemia virus 0 0 0 0 0 27 0 139 166 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Aliihoeflea;s__Aliihoeflea sp. 2WW;t__ 0 1 499 24 3 0 0 82198 82725 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-HM1;t__ 0 0 0 0 0 0 0 3620 3620 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Diachasmimorpha longicaudata rhabdovirus;t__ 0 0 0 0 0 0 0 268 268 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas echinoides;t__Sphingomonas echinoides ATCC 14820 0 1 2 3 83 86 0 83308 83483 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Staphylococcus phage phiPVL-CN125;t__ 73 697 0 0 0 0 0 119 889 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus EC6;t__Escherichia phage EC6 0 0 0 0 56 337 0 1331 1724 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Tamana bat virus;t__ 0 0 0 0 0 0 0 201 201 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermofilaceae;g__Thermofilum;s__Thermofilum carboxyditrophus;t__Thermofilum carboxyditrophus 1505 0 0 0 0 0 20 0 35063 35083 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Suspvirus;s__Escherichia virus SUSP2;t__Escherichia phage SUSP2 0 0 0 0 11 582 0 1180 1773 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Ramlibacter;s__Ramlibacter sp. Leaf400;t__ 0 1 0 24 49 10 0 91604 91688 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Frateuria;s__Frateuria sp. Soil773;t__ 0 2 2 19 94 1 0 90381 90499 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium pseudodiphtheriticum;t__Corynebacterium pseudodiphtheriticum DSM 44287 0 0 9 4 0 58 0 45127 45198 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__Actinobacteria bacterium OK074;t__ 2 0 690 0 0 0 0 212065 212758 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai razor shell virus 4;t__ 0 0 0 0 0 0 0 158 158 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella;s__Salmonella enterica;t__Salmonella enterica subsp. enterica 0 0 0 0 0 0 0 1878 1878 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage LZ35;t__ 0 0 0 1 0 5 0 891 897 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Cavemovirus;s__Sweet potato caulimo-like virus;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sida yellow vein alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus saprophyticus;t__Staphylococcus saprophyticus subsp. saprophyticus 0 0 0 0 0 0 0 1039 1224 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-1;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paenibacillus phage Fern;t__ 0 0 0 419 11 30 0 299 759 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium gallinarum;t__ 0 0 0 0 1 22 0 43176 43199 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria lacuscaerulensis;t__Silicibacter lacuscaerulensis ITI-1157 0 1 1 0 131 21 0 70079 70233 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia arthritidis;t__Nocardia arthritidis NBRC 100137 0 0 5 11 8 0 0 142247 142271 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Pediococcus;s__Pediococcus claussenii;t__Pediococcus claussenii ATCC BAA-344 0 0 0 0 58 0 0 1975 2980 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Phrodo;t__ 0 0 0 0 674 518 0 2096 3288 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Hydrogenophilales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus denitrificans;t__Thiobacillus denitrificans ATCC 25259 0 0 18 0 0 0 0 58178 58196 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium sp. ORS3324;t__ 104 0 1 15 1 67 0 130641 130829 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Beijerinckia;s__Beijerinckia indica;t__Beijerinckia indica subsp. indica 0 0 0 30 10 0 0 83363 83403 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage syn9;t__ 0 0 0 0 0 0 0 3545 3545 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage S-RIP1;t__ 0 0 0 0 0 0 0 897 897 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Hyphantria cunea nucleopolyhedrovirus;t__ 0 0 0 0 0 2 0 2657 2659 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Micromonas pusilla virus 12T;t__ 0 0 0 0 0 0 0 4112 4112 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiETA3;t__ 0 0 0 0 198 424 0 243 865 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Jeotgalibacillus;s__Jeotgalibacillus malaysiensis;t__ 0 0 0 0 0 0 0 12061 12061 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix sp. 336/3;t__ 0 0 0 0 0 0 0 2534 2733 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian adenovirus 19;t__ 0 0 0 0 0 54 0 627 681 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phiNM;t__ 0 0 0 0 682 40 0 140 862 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus D;t__ 0 0 0 0 0 0 0 701 701 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium capitovis;t__Corynebacterium capitovis DSM 44611 0 0 0 0 0 15 0 39194 39209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pepy6virus;s__Rhodococcus virus Pepy6;t__Rhodococcus phage ReqiPoco6 0 0 0 0 0 5 0 1556 1561 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus erythropolis;t__Rhodococcus erythropolis CCM2595 0 0 14 27 12 58 0 125512 125623 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Biseptimavirus;s__Staphylococcus phage 13;t__ 0 0 0 0 498 14 0 342 854 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Condylorrhiza vestigialis MNPV;t__ 0 0 0 0 0 1 0 2514 2515 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Pelagibacterium;s__Pelagibacterium halotolerans;t__Pelagibacterium halotolerans B2 0 0 11 6 11 0 0 78868 78896 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Afifella;s__Afifella pfennigii;t__Afifella pfennigii DSM 17143 0 0 2 8 2 0 0 77328 77340 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Halogranum;s__Halogranum salarium;t__Halogranum salarium B-1 0 0 3 0 3 0 0 89811 89817 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia vinacea;t__Nocardia vinacea NBRC 16497 0 0 3 11 5 158 0 202124 202301 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharothrix;s__Saccharothrix sp. ST-888;t__ 0 0 28 0 0 0 0 155221 155249 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces leeuwenhoekii;t__ 0 0 17 0 2 1237 0 156821 158077 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus E;t__ 0 0 0 0 0 0 28 691 719 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium herbicidovorans;t__Sphingobium herbicidovorans NBRC 16415 0 43 29 9 1554 281 0 79589 81505 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage phiPYB5;t__ 0 0 0 0 0 7 0 649 656 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Teviot rubulavirus;t__Teviot virus 0 0 0 0 0 0 0 310 310 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Primate bocaparvovirus 2;t__Human bocavirus 4 NI 0 0 0 0 0 0 0 102 102 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Shewanellaceae;g__Shewanella;s__Shewanella baltica;t__Shewanella baltica OS678 0 0 0 0 0 0 0 1555 1613 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium resistens;t__Corynebacterium resistens DSM 45100 6 0 140 9 0 234 0 51637 52026 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus brevis;t__Lactobacillus brevis ATCC 367 0 0 0 0 0 1 0 823 978 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Macavirus;s__Ovine gammaherpesvirus 2;t__ 0 0 0 0 0 0 0 2702 2702 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas cremoricolorata;t__ 0 0 22 0 0 456 0 95130 95608 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__Olsenella sp. SIT9;t__ 0 0 0 0 0 0 0 36338 36338 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage Slt;t__ 0 0 0 0 90 209 0 559 858 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Octadecabacter;s__Octadecabacter temperatus;t__ 0 0 1 0 0 0 0 64660 64661 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Turkey aviadenovirus D;t__Turkey aviadenovirus 5 0 0 0 0 0 0 0 873 873 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Salinarimonas;s__Salinarimonas rosea;t__Salinarimonas rosea DSM 21201 0 1 1 8 0 0 0 104771 104781 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Sciscionella;s__Sciscionella marina;t__Sciscionella marina DSM 45152 0 0 62 0 40 0 0 170415 170517 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces scabrisporus;t__Streptomyces scabrisporus DSM 41855 0 0 14 0 0 21 0 227286 227321 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces meyeri;t__ 0 0 71 0 0 25 0 40885 40981 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium caspium;t__Corynebacterium caspium DSM 44850 0 0 1 2 0 9 0 36829 36841 k__Bacteria;p__Chloroflexi;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Thermanaerothrix;s__Thermanaerothrix daxensis;t__ 0 0 0 0 3 0 0 60229 60232 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus geothermalis;t__Deinococcus geothermalis DSM 11300 0 0 0 0 0 0 0 14615 15594 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azoarcus;s__Azoarcus sp. KH32C;t__ 0 2 35 0 50 45 0 101491 101623 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia donghaensis;t__ 105 5 0 0 27 19 0 69322 69478 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces turicensis;t__Actinomyces turicensis ACS-279-V-Col4 0 14 40 0 48 44 0 38866 39012 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Roseateles;s__Roseateles depolymerans;t__ 0 3 0 49 77 0 0 113505 113634 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium mcbrellneri;t__Brevibacterium mcbrellneri ATCC 49030 2 0 21 23 0 10 0 51002 51058 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. WM6378;t__ 0 0 18 0 3 405 0 188630 189056 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium AAP38;t__ 0 0 28 0 0 0 0 115549 115577 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ahrensia;s__Ahrensia sp. R2A130;t__ 0 9 10 0 1 0 0 74485 74505 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium ciceri;t__Mesorhizobium ciceri biovar biserrulae 0 0 3 24 8 201 0 125053 125289 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum sp. BV1;t__ 0 0 10 7 3 58 0 55185 55263 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia seosinensis;t__ 138 0 0 0 26 22 0 76009 76195 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ketogulonicigenium;s__Ketogulonicigenium vulgare;t__Ketogulonicigenium vulgare WSH-001 1 0 3 0 94 0 0 55229 55327 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage iLp84;t__ 0 0 0 0 0 115 0 672 787 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinopolysporales;f__Actinopolysporaceae;g__Actinopolyspora;s__Actinopolyspora erythraea;t__ 73 0 12 0 0 12 0 106824 106921 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhodothermus phage RM378;t__ 0 0 0 0 0 0 0 2598 2598 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 38;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__N15virus;s__Escherichia virus N15;t__ 0 0 0 0 0 0 0 927 927 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Hoeflea;s__Hoeflea phototrophica;t__Hoeflea phototrophica DFL-43 0 1 5 40 10 0 0 89291 89347 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora glauca;t__Saccharomonospora glauca K62 0 0 57 0 20 1481 0 89182 90740 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Thermomonospora;s__Thermomonospora curvata;t__Thermomonospora curvata DSM 43183 0 0 8 7 0 0 0 112765 112780 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus occultus;t__Natronococcus occultus SP4 0 0 5 0 64 133 0 80062 80264 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium falsenii;t__ 2 0 3 17 0 131 7 43505 43665 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum kocurii;t__Halorubrum kocurii JCM 14978 0 0 5 10 5 237 0 71930 72187 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf343;t__ 0 0 0 0 5 103 0 71862 71970 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage vB_EcoM_Alf5;t__ 0 0 0 0 374 9 0 1370 1753 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage PH15;t__ 0 0 0 0 0 57 0 823 880 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Mannheimia phage phiMHaA1;t__ 0 0 0 0 15 344 0 331 690 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Wuhan Fly Virus 1;t__ 0 0 0 0 0 0 0 242 242 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Vibrio;s__Vibrio breoganii;t__ 0 0 0 0 0 0 0 6817 6818 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Nona33virus;s__Escherichia virus 933W;t__Enterobacteria phage 933W 0 0 0 16 3 0 0 1214 1233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Agrotis segetum nucleopolyhedrovirus A;t__ 0 0 0 0 0 0 0 2950 2950 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sitaravirus;s__Paenibacillus virus Sitara;t__Paenibacillus phage Sitara 0 0 0 394 239 0 0 241 874 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium callunae;t__Corynebacterium callunae DSM 20147 0 0 8 15 0 636 0 56132 56791 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora mediocidica;t__Kitasatospora mediocidica KCTC 9733 0 0 157 0 508 187 0 172772 173624 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Mycetocola;s__Mycetocola saprophilus;t__ 0 0 0 0 27 0 0 68964 68991 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter henricii;t__ 0 0 9 0 12 76 0 119613 119710 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Phyllobacterium;s__Phyllobacterium sp. UNC302MFCol5.2;t__ 0 0 4 29 4 1 0 94516 94554 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Ungulate bocaparvovirus 1;t__Bovine parvovirus 0 0 0 0 0 0 0 110 110 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halopiger;s__Halopiger goleimassiliensis;t__ 0 0 4 0 34 24 0 78042 78104 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus CB13;t__ 0 0 0 0 22 66 0 554 643 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Turkey aviadenovirus B;t__Turkey adenovirus 1 0 0 0 0 0 0 0 908 908 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Cronobacter phage vB_CsaM_GAP161;t__ 0 0 0 0 13 251 0 3299 3563 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Arcanobacterium;s__Arcanobacterium haemolyticum;t__Arcanobacterium haemolyticum DSM 20595 4 0 226 0 19 4 0 39470 39723 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronorubrum;s__Natronorubrum sulfidifaciens;t__Natronorubrum sulfidifaciens JCM 14089 0 0 0 0 59 0 0 69028 69087 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus I;t__ 0 0 0 0 0 0 0 338 338 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus;s__Enterococcus durans;t__ 0 0 0 0 0 0 0 3217 4093 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyoomikronpapillomavirus;s__Dyoomikronpapillomavirus 1;t__Saimiri sciureus papillomavirus 1 0 0 0 0 0 0 0 151 151 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Confluentimicrobium;s__Confluentimicrobium sp. EMB200-NS6;t__ 0 0 0 0 90 0 0 7626 9958 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobius;s__Thalassobius mediterraneus;t__ 104 0 0 0 226 15 0 68254 68599 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage Lw1;t__ 0 0 0 0 7 924 0 2593 3524 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella;s__Klebsiella pneumoniae;t__Klebsiella pneumoniae subsp. pneumoniae 0 0 0 80 7 0 0 6000 6958 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. Leaf89;t__ 0 1 1 6 4 22 0 99733 99767 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacteriophage Lily;t__ 0 0 0 1 1 11 0 886 899 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 3;t__ 0 0 0 0 0 0 0 323 323 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage Fah;t__ 0 0 0 0 64 681 0 14 759 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Deltalipothrixvirus;s__Acidianus filamentous virus 2;t__ 0 0 0 0 0 0 0 635 635 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Litoreibacter;s__Litoreibacter arenae;t__Litoreibacter arenae DSM 19593 0 0 0 0 40 0 0 73578 73618 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 949;t__ 0 0 0 0 0 0 0 2295 2295 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Haloarcula;s__Haloarcula hispanica;t__Haloarcula hispanica ATCC 33960 0 0 9 0 2 254 0 69416 69681 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium amorphae;t__Mesorhizobium amorphae CCNWGS0123 0 0 0 0 0 0 0 21474 21507 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Mannheimia phage vB_MhS_1152AP2;t__ 0 0 0 16 0 488 0 538 1042 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Spo1virus;s__Bacillus virus Camphawk;t__Bacillus phage CampHawk 0 0 0 0 0 1354 0 1569 2923 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharothrix;s__Saccharothrix espanaensis;t__Saccharothrix espanaensis DSM 44229 0 0 48 0 139 92 0 186934 187213 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Sea otter parvovirus 1;t__ 0 0 0 0 0 0 0 92 92 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria mobilis;t__Ruegeria mobilis F1926 0 0 0 0 4 0 0 30633 31379 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter marinus;t__ 0 0 0 0 7 4 0 56699 56710 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Methylophilales;f__Methylophilaceae;g__Methylovorus;s__Methylovorus glucosotrophus;t__Methylovorus glucosetrophus SIP3-4 0 0 0 0 0 0 0 1728 1728 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__Massilia;s__Massilia sp. WG5;t__ 0 0 0 0 0 0 0 4243 4352 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium asiaticum;t__Mycobacterium asiaticum DSM 44297 0 0 0 4 0 69 0 117940 118013 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Demetria;s__Demetria terragena;t__Demetria terragena DSM 11295 0 0 12 9 17 0 0 71452 71490 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter noctilucicola;t__ 0 0 2 0 190 319 0 81195 81706 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Catenulisporales;f__Catenulisporaceae;g__Catenulispora;s__Catenulispora acidiphila;t__Catenulispora acidiphila DSM 44928 0 0 44 1 0 0 0 209310 209355 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. JS614;t__ 1 0 17 0 8 80 0 105765 105871 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia phymatum;t__Paraburkholderia phymatum STM815 0 0 0 0 0 0 0 49764 49997 k__Bacteria;p__;c__;o__;f__;g__Thermobaculum;s__Thermobaculum terrenum;t__Thermobaculum terrenum ATCC BAA-798 30 0 0 0 0 0 0 61998 62028 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Pseudaletia unipuncta granulovirus;t__ 0 0 0 0 0 0 0 3533 3533 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. Root381;t__ 0 1 3 7 1 103 0 113608 113723 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus peraridilitoris;t__Deinococcus peraridilitoris DSM 19664 0 0 0 0 0 0 0 12317 12635 k__Bacteria;p__Chloroflexi;c__Dehalococcoidia;o__Dehalococcoidales;f__Dehalococcoidaceae;g__Dehalococcoides;s__Dehalococcoides mccartyi;t__ 0 0 0 0 0 0 856 30514 31370 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronolimnobius;s__Natronolimnobius innermongolicus;t__Natronolimnobius innermongolicus JCM 12255 0 0 3 0 162 0 0 91363 91528 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer sp. LC163;t__ 0 0 0 6 52 0 0 130245 130303 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella ovis;t__ 0 0 0 0 0 0 0 811 811 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Serratia phage Eta;t__ 0 0 0 0 0 0 0 854 854 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium aquaticum;t__ 0 2 8 13 11 32 0 106899 106965 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrinema;s__Natrinema pellirubrum;t__Natrinema pellirubrum DSM 15624 0 0 125 0 244 17 0 75423 75809 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanicola;s__Oceanicola sp. MCTG156(1a);t__ 0 0 2 0 302 5 0 77306 77615 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Propionicicella;s__Propionicicella superfundia;t__Propionicicella superfundia DSM 22317 6 0 148 4 1 0 0 72126 72285 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Yogue virus;t__ 0 0 0 0 0 0 0 361 361 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter salsicius;t__Leucobacter salsicius M1-8 2 0 11 16 33 58 0 63538 63658 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas sp. B29;t__ 0 0 0 1 52 31 0 108748 108832 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__Olsenella uli;t__Olsenella uli DSM 7084 0 0 0 0 0 9 0 41028 41037 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Iltovirus;s__Gallid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2973 2973 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Haematomicrobium;s__Haematomicrobium sanguinis;t__Haematomicrobium sanguinis DSM 21259 1 0 92 10 22 0 0 58327 58452 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Lentzea;s__Lentzea albidocapillata;t__ 0 0 6 0 7 242 0 172358 172613 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Dolphin polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium urealyticum;t__Corynebacterium urealyticum DSM 7109 141 0 474 3 0 96 0 46670 47384 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia rhamnosiphila;t__Nocardia rhamnosiphila NBRC 108938 0 0 6 11 12 32 0 153040 153101 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinovum;s__Marinovum algicola;t__Marinovum algicola DG 898 0 0 0 0 91 0 0 25922 30486 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum thiophilum;t__ 0 5 20 10 31 386 0 151723 152175 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp8virus;s__Campylobacter virus CP30A;t__Campylobacter phage CP30A 0 0 0 0 0 1003 0 1668 2671 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium malaysiense;t__ 11 5 0 68 12 23 0 100264 100383 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas phage CC2;t__ 0 0 0 0 0 0 0 4634 4634 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas maliensis;t__ 0 0 0 1 13 28 0 96858 96900 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus maanshanensis;t__Rhodococcus maanshanensis NBRC 100610 1 0 1 9 8 13 0 113258 113290 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__;s__Cod iridovirus;t__Ranavirus maximus 0 0 0 0 425 0 0 1885 2310 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris CGA009 0 0 0 0 79 55 342 108708 109184 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia buchneri;t__ 0 0 0 0 0 0 0 3070 3129 k__Viruses;p__unclassified bacterial viruses;c__Staphylococcus phage tp310-1;o__;f__;g__;s__;t__ 704 0 0 0 0 0 0 140 844 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium triplex;t__ 0 0 0 1 0 725 0 126829 127555 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__Rothia dentocariosa;t__Rothia dentocariosa ATCC 17931 17 0 23 22 17 0 235 49806 50120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Aquamavirus;s__Aquamavirus A;t__Seal picornavirus type 1 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Spo1virus;s__Bacillus virus SPO1;t__ 0 0 0 0 0 0 0 2651 2651 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 7;t__ 0 0 0 0 0 0 0 323 323 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCD506;t__ 0 0 0 16 155 185 0 309 665 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Southern rice black-streaked dwarf virus;t__ 0 0 0 0 0 0 0 566 566 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage vB_SemP_Emek;t__ 0 0 0 16 0 208 0 571 795 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Citrobacter phage IME-CF2;t__ 0 0 0 0 0 0 0 3553 3553 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Actibacterium;s__Actibacterium mucosum;t__Actibacterium mucosum KCTC 23349 0 0 2 0 31 0 0 74234 74267 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Aromatoleum;s__Aromatoleum aromaticum;t__Aromatoleum aromaticum EbN1 0 17 23 0 20 0 0 85864 85924 k__Viruses;p__dsDNA viruses, no RNA stage;c__Turriviridae;o__;f__;g__Alphaturrivirus;s__Sulfolobus turreted icosahedral virus 2;t__ 0 0 0 0 0 0 0 332 332 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pectobacterium phage My1;t__ 0 0 0 0 0 0 0 2440 2440 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Brevidensovirus;s__Mosquito densovirus BR/07;t__ 0 0 0 0 0 2 0 75 77 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium mongoliense;t__Bifidobacterium mongoliense DSM 21395 84 0 0 0 3 147 0 43096 43330 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bovine polyomavirus 2;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage SM1;t__ 0 0 0 0 0 0 0 693 693 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Lleida bat lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp8virus;s__Campylobacter virus NCTC12673;t__ 0 0 0 0 0 488 0 2212 2700 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium genavense;t__Mycobacterium genavense ATCC 51234 0 0 1 2 0 54 0 98619 98676 k__Bacteria;p__Kiritimatiellaeota;c__Kiritimatiellae;o__Kiritimatiellales;f__Kiritimatiellaceae;g__Kiritimatiella;s__Kiritimatiella glycovorans;t__ 0 0 0 0 0 0 0 58994 58994 k__Bacteria;p__Verrucomicrobia;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Verrucomicrobiaceae;g__Haloferula;s__Haloferula sp. BvORR071;t__ 0 0 0 0 0 0 0 155782 155782 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Salmonella phage FSL SP-004;t__ 0 0 0 1 0 96 0 497 594 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium loti;t__Mesorhizobium loti NZP2037 0 0 0 0 0 0 0 9350 9488 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Listeria phage List-36;t__ 0 0 0 0 0 810 0 1829 2639 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Escherichia virus P2;t__ 0 0 0 0 0 105 0 566 671 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium argentoratense;t__Corynebacterium argentoratense DSM 44202 0 0 16 12 0 116 0 40494 40638 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. CB0205;t__ 0 0 1 14 0 30 0 48358 48403 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Shimoni bat lyssavirus;t__ 0 0 0 0 0 0 0 240 240 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium linens;t__ 0 0 13 11 0 0 0 84174 84198 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Curiovirus;s__Curionopolis curiovirus;t__Curionopolis virus 0 0 0 0 0 0 0 263 263 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P118;t__ 0 0 0 0 0 323 0 760 1083 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Prochlorococcus phage P-SSP7;t__ 0 0 0 0 0 0 0 903 903 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__Candidatus Accumulibacter;s__Candidatus Accumulibacter phosphatis;t__Candidatus Accumulibacter phosphatis clade IIA str. UW-1 0 1 0 0 0 0 0 4593 4947 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aureimonas;s__Aureimonas altamirensis;t__ 0 0 0 10 0 5 0 83678 83693 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. KM-1;t__ 0 1 2 1 0 31 0 99493 99528 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp. FCS-9;t__ 4 2 5 0 56 16 0 78717 78803 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__;s__Burkholderiales bacterium JOSHI_001;t__ 0 0 0 15 10 10 0 111969 112004 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage vB_SenS-Ent3;t__ 0 0 0 0 142 455 0 258 855 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus C;t__ 0 0 0 0 0 0 0 340 340 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Nakamurellales;f__Nakamurellaceae;g__Nakamurella;s__Nakamurella multipartita;t__Nakamurella multipartita DSM 44233 0 0 25 0 0 0 0 121161 121205 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium arupense;t__ 0 0 1 4 0 981 0 87515 88501 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Siadenovirus;s__Skua siadenovirus A;t__Skua adenovirus 1 0 0 0 0 0 0 0 526 526 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Bovine gammaherpesvirus 4;t__ 0 0 0 0 0 0 0 2177 2177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Microcystis phage MaMV-DC;t__ 0 0 0 0 0 1020 0 2364 3384 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Agrobacterium phage 7-7-1;t__ 0 0 0 0 0 0 0 1387 1387 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Polymorphum;s__Polymorphum gilvum;t__Polymorphum gilvum SL003B-26A1 0 2 88 0 0 0 0 92897 92987 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage MED4-213;t__ 0 0 0 0 0 0 0 3619 3619 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus B;s__Influenza B virus;t__Influenza B virus (B/Lee/1940) 0 0 0 0 0 0 0 275 275 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-HM2;t__ 0 0 0 0 0 35 0 3641 3676 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Una961virus;s__Helicobacter virus KHP40;t__Helicobacter phage KHP40 0 0 0 0 0 4 0 524 528 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Geobacillus virus E3;t__ 0 0 0 0 0 0 0 2825 2825 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-14;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Brugmansia mosaic virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 31;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 16 LDMD-2013;t__ 0 0 0 0 0 0 0 44 44 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Rhodoluna;s__Rhodoluna lacicola;t__ 0 0 3 1 8 0 0 28596 28608 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Lymphocystivirus;s__Lymphocystis disease virus - isolate China;t__ 0 0 0 0 0 0 0 3724 3724 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Chrysanthemum stem necrosis virus;t__ 0 0 0 0 0 0 0 330 330 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pelagibacter phage HTVC010P;t__ 0 0 0 0 0 0 0 697 697 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Spodoptera frugiperda rhabdovirus;t__ 0 0 0 0 0 0 0 270 270 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Andes orthohantavirus;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Mosquito Virus 2;t__ 0 0 0 0 0 0 0 213 213 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dyella;s__Dyella japonica;t__Dyella japonica UNC79MFTsu3.2 0 1 6 34 51 37 0 100169 100298 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter sp. AzwK-3b;t__ 0 0 1 0 95 6 0 83414 83516 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage Sap26;t__ 0 0 0 0 39 370 0 415 824 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 96;t__ 0 0 0 0 148 261 0 462 871 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces aureocirculatus;t__ 1 0 15 0 1 555 0 185433 186005 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aureimonas;s__Aureimonas ureilytica;t__ 0 0 0 11 0 8 0 99881 99900 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia hermsii;t__Borrelia hermsii DAH 0 0 0 0 0 0 0 2858 2861 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp. ALJ1;t__ 0 1 5 0 0 275 0 55030 55311 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Nisaea;s__Nisaea denitrificans;t__Nisaea denitrificans DSM 18348 0 1 4 1 2 0 0 92433 92441 k__Bacteria;p__;c__;o__;f__;g__;s__bacterium JKG1;t__ 0 0 0 0 0 0 0 89499 89499 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Tibrovirus;s__Tibrogargan tibrovirus;t__Tibrogargan virus 0 0 0 0 0 0 0 265 265 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia spinosispora;t__Pseudonocardia spinosispora DSM 44797 0 0 2 0 0 4 0 190494 190500 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia sp. 348MFTsu5.1;t__ 0 0 1 19 1 1 0 114137 114159 k__Viruses;p__unclassified bacterial viruses;c__Staphylococcus phage tp310-3;o__;f__;g__;s__;t__ 672 64 0 0 0 0 0 123 859 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces roseoverticillatus;t__ 42 0 28 0 5 393 0 143383 143934 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces israelii;t__Actinomyces israelii DSM 43320 0 0 1 0 0 79 0 80204 80284 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus virus c2;t__ 0 0 0 0 0 0 0 443 443 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__;g__Lawsonella;s__Lawsonella clevelandensis;t__ 1 0 27 78 0 0 0 38197 38303 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Betabaculovirus;s__Spodoptera frugiperda granulovirus;t__ 0 0 0 0 0 0 0 2818 2818 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. Leaf99;t__ 0 0 7 6 4 190 0 92667 92874 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium lubricantis;t__Corynebacterium lubricantis DSM 45231 0 0 29 0 0 150 0 58581 58760 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Dongia;s__Dongia sp. URHE0060;t__ 0 0 4 0 0 0 0 121296 121300 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Tobacco streak virus;t__ 0 0 0 0 0 0 0 168 168 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Symbiobacteriaceae;g__Symbiobacterium;s__Symbiobacterium thermophilum;t__Symbiobacterium thermophilum IAM 14863 2 0 1 0 0 0 0 71319 71322 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter sulfonivorans;t__ 5 0 12 19 110 90 0 100639 100875 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus methanolicus;t__Bacillus methanolicus MGA3 0 0 0 0 0 0 0 1751 1761 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blatta orientalis);t__Blattabacterium sp. (Blatta orientalis) str. Tarazona 0 0 0 0 0 3 0 71 74 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium afermentans;t__Corynebacterium afermentans subsp. afermentans 0 0 0 6 0 56 0 46808 46870 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Natrialba phage PhiCh1;t__ 0 0 0 0 0 0 0 1169 1169 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas taxi;t__ 0 0 6 2 6 109 0 77058 77181 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling zhaovirus-like virus 1;t__ 0 0 0 0 0 0 0 112 112 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax sp. SB29;t__ 0 0 1 1 0 41 0 75225 75268 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage helene 12B3;t__ 0 0 0 0 0 0 0 2719 2719 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas oryziterrae;t__Arenimonas oryziterrae DSM 21050 = YC6267 0 0 1 0 20 0 0 61769 61790 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Vibrio phage pVp-1;t__ 0 0 0 0 0 0 0 2230 2230 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cytotoxicus;t__Bacillus cytotoxicus NVH 391-98 0 0 0 0 0 0 0 142 142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Orgyia pseudotsugata multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 3 0 2636 2639 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter sp. P11F6;t__ 0 0 0 0 92 0 0 623 895 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium atypicum;t__ 0 0 17 7 0 5 0 46198 46227 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Muromegalovirus;s__Murid betaherpesvirus 1;t__ 0 0 0 0 0 0 0 4605 4605 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Glutamicibacter;s__Glutamicibacter arilaitensis;t__Glutamicibacter arilaitensis Re117 12 0 152 177 222 0 0 76622 77185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Erysipelothrix phage SE-1;t__ 0 0 0 0 0 0 0 699 699 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Bat bocavirus;t__ 0 0 0 0 0 0 0 104 104 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas daejeonensis;t__ 0 0 19 0 31 3 0 65408 65461 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe qinvirus-like virus 1;t__ 0 0 0 0 0 0 0 154 154 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus scotoductus;t__Thermus scotoductus SA-01 1 0 2 0 3 653 0 46277 46936 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Microvirga;s__Microvirga vignae;t__ 0 0 0 4 0 10 0 129068 129082 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter sphaeroides;t__Rhodobacter sphaeroides ATCC 17025 0 0 0 0 9 0 0 64345 64354 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus oceani;t__Nitrosococcus oceani ATCC 19707 0 0 0 0 0 0 0 792 808 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas malthae;t__Arenimonas malthae CC-JY-1 53 0 2 4 20 35 0 61745 61863 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas;s__Pseudoxanthomonas suwonensis;t__Pseudoxanthomonas suwonensis 11-1 13 0 5 2 83 3 46 68228 68380 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus geothermalis;t__Deinococcus geothermalis DSM 11300 0 0 0 0 0 16 0 49328 49344 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfohalobiaceae;g__Desulfohalobium;s__Desulfohalobium retbaense;t__Desulfohalobium retbaense DSM 5692 0 0 0 0 0 0 0 893 905 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanibulbus;s__Oceanibulbus indolifex;t__Oceanibulbus indolifex HEL-45 0 0 0 0 535 0 0 81380 81915 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius tolerans;t__ 22 0 0 0 11 0 0 74725 74758 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter crystallopoietes;t__Arthrobacter crystallopoietes BAB-32 1 0 1 6 20 4 0 86289 86321 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas phyllosphaerae;t__Sphingomonas phyllosphaerae FA2 0 0 0 2 13 75 0 78300 78390 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas neptunium;t__Hyphomonas neptunium ATCC 15444 0 0 0 0 0 0 0 74100 74100 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces iranensis;t__ 6 0 24 0 7 629 0 241751 242417 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium parascrofulaceum;t__Mycobacterium parascrofulaceum ATCC BAA-614 11 0 13 6 0 776 0 124350 125157 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia veterana;t__Nocardia veterana NBRC 100344 1 0 2 6 9 259 0 135032 135309 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium uterequi;t__ 0 0 1 8 0 18 0 48361 48388 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermatophilaceae;g__Austwickia;s__Austwickia chelonae;t__Austwickia chelonae NBRC 105200 0 0 4 16 3 0 0 70738 70761 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Haloarcula;s__Haloarcula vallismortis;t__Haloarcula vallismortis ATCC 29715 0 0 100 0 1 1 0 78229 78331 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__;s__alpha proteobacterium AAP81b;t__ 0 0 10 0 0 0 0 68596 68606 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Trueperella;s__Trueperella pyogenes;t__ 0 0 31 0 17 0 0 38404 38452 k__Bacteria;p__;c__;o__;f__;g__;s__bacterium SIT5;t__ 115 0 0 0 0 0 0 58566 58681 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__;g__;s__Rhizobiales bacterium YIM 77505;t__ 0 1 0 32 0 0 0 83792 83825 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Inquilinus;s__Inquilinus limosus;t__Inquilinus limosus DSM 16000 0 0 14 0 6 0 0 148038 148058 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter vibrioides;t__Caulobacter crescentus CB15 0 0 8 0 0 0 101 80749 80858 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. 150FB;t__ 1 0 10 0 6 234 0 187507 187758 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseus;t__Streptomyces griseus subsp. griseus 2 0 4 0 1 913 0 196380 197300 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Castellaniella;s__Castellaniella defragrans;t__Castellaniella defragrans 65Phen 0 167 21 66 47 0 0 78755 79056 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Tanticharoenia;s__Tanticharoenia sakaeratensis;t__Tanticharoenia sakaeratensis NBRC 103193 0 1 0 0 18 0 0 69938 69957 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas ginsengisoli;t__ 0 0 0 0 7 337 0 66956 67300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage phiPSA1;t__ 0 0 0 0 0 0 0 1021 1021 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius atlanticus;t__ 0 0 1 0 5 0 0 91426 91432 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Marburgvirus;s__Marburg marburgvirus;t__ 0 0 0 0 0 0 0 382 382 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Pseudothermotoga;s__Pseudothermotoga hypogea;t__Pseudothermotoga hypogea DSM 11164 = NBRC 106472 0 0 0 0 23 2 0 43283 43308 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus WIV9;t__ 0 0 0 0 0 301 0 449 750 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacteroides phage B40-8;t__ 0 0 0 0 0 0 0 898 898 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Thermogladius;s__Thermogladius cellulolyticus;t__Thermogladius cellulolyticus 1633 0 0 0 0 8 0 0 27118 27126 k__Archaea;p__Euryarchaeota;c__Archaeoglobi;o__Archaeoglobales;f__Archaeoglobaceae;g__Archaeoglobus;s__Archaeoglobus profundus;t__Archaeoglobus profundus DSM 5631 0 0 0 0 2 2 0 31208 31212 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces scopuliridis;t__Streptomyces scopuliridis RB72 0 0 13 0 6 417 0 164216 164652 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacteria phage vB_EcoS_NBD2;t__ 0 0 0 0 0 0 0 1036 1036 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus D;t__ 0 0 0 0 0 0 0 701 701 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Oceanibaculum;s__Oceanibaculum indicum;t__Oceanibaculum indicum P24 0 0 1 2 0 0 0 78919 78922 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. UNC402CLCol;t__ 0 0 1 87 3 78 0 112061 112230 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia effusa;t__Gordonia effusa NBRC 100432 0 0 2 17 0 17 0 93777 93813 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. ATCC 21022;t__ 11 0 12 13 219 19 0 88424 88698 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Alteromonadaceae;g__Marinobacter;s__Marinobacter adhaerens;t__Marinobacter adhaerens HP15 0 0 0 0 0 0 0 4563 4594 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis sp. 113P3;t__ 0 0 0 0 4 294 0 88117 88415 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Patulibacteraceae;g__Patulibacter;s__Patulibacter minatonensis;t__Patulibacter minatonensis DSM 18081 0 0 0 2 0 23 0 110132 110157 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. 35W;t__ 9 0 14 14 114 0 0 92898 93049 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia takedensis;t__Nocardia takedensis NBRC 100417 0 0 2 15 3 3124 0 157036 160180 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium xenopi;t__Mycobacterium xenopi RIVM700367 0 0 1 1 0 2012 0 86470 88484 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium leucaenae;t__Rhizobium leucaenae USDA 9039 0 0 0 10 54 158 0 133161 133385 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Nostocales;f__Rivulariaceae;g__Calothrix;s__Calothrix parietina;t__Calothrix sp. PCC 6303 0 0 0 0 0 0 0 3737 3847 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes friuliensis;t__Actinoplanes friuliensis DSM 7358 0 0 13 0 32 134 0 187342 187521 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Polyangiaceae;g__Chondromyces;s__Chondromyces apiculatus;t__Chondromyces apiculatus DSM 436 18 131 0 19 16 0 0 231031 231215 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. LC85;t__ 0 0 1 8 3 37 0 131093 131142 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. 37zxx;t__ 0 0 1 1 4 23 0 73592 73621 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas;s__Blastomonas sp. RAC04;t__ 0 0 0 0 0 0 0 8401 8412 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas;s__Natronomonas moolapensis;t__Natronomonas moolapensis 8.8.11 0 0 9 0 2 0 0 58240 58251 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium pentaromativorans;t__Novosphingobium pentaromativorans US6-1 0 0 0 669 40 25 0 24862 29554 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium animalis;t__Bifidobacterium animalis subsp. lactis 8 26 5 0 1 194 0 38535 38769 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Sutterellaceae;g__Sutterella;s__Sutterella parvirubra;t__Sutterella parvirubra YIT 11816 0 0 1 4 1 6 0 46617 46629 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Halogeometricum;s__Halogeometricum pallidum;t__Halogeometricum pallidum JCM 14848 1 0 40 8 1 0 0 87556 87606 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium linens;t__ 0 0 15 14 0 85 0 77130 77244 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Falconid herpesvirus 1;t__ 0 0 0 0 1 2999 0 1081 4081 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Jumbo;t__ 0 0 0 0 0 0 0 1566 1566 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces vaccimaxillae;t__Actinomyces vaccimaxillae DSM 15804 0 0 15 0 2 16 0 46712 46745 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia sp. Root436;t__ 0 0 0 1 0 53 0 78288 78342 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium marinum;t__Corynebacterium marinum DSM 44953 0 0 3 5 0 191 0 51946 52145 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Microvirga;s__Microvirga lotononidis;t__ 0 0 0 10 0 91 0 141180 141281 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium jeikeium;t__Corynebacterium jeikeium K411 3 0 165 13 0 1424 0 47644 49249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage PLE3;t__ 0 0 0 0 0 672 0 148 820 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Knoellia;s__Knoellia sp. Soil729;t__ 0 0 12 12 56 70 0 71951 72101 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium acidiphilum;t__Novosphingobium acidiphilum DSM 19966 0 0 2 11 6 13 0 74039 74071 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus JD7;t__Staphylococcus phage JD007 0 0 0 0 0 0 0 2836 2836 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Geminicoccus;s__Geminicoccus roseus;t__Geminicoccus roseus DSM 18922 0 0 2 0 0 0 0 113953 113955 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__;g__Methyloceanibacter;s__Methyloceanibacter caenitepidi;t__ 0 0 2 2 0 0 0 68495 68499 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Glaciibacter;s__Glaciibacter superstes;t__Glaciibacter superstes DSM 21135 3 0 1 2 78 0 0 95896 95980 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis alaskensis;t__Sphingopyxis alaskensis RB2256 0 1 1 11 25 1086 0 65779 66903 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Confluentimicrobium;s__Confluentimicrobium sp. EMB200-NS6;t__ 0 0 2 0 73 0 0 72911 72986 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus f18SE;t__Salmonella phage f18SE 0 0 0 0 43 71 0 723 837 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium renale;t__ 0 0 1 2 0 8 0 46426 46437 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum lipoferum;t__Azospirillum lipoferum 4B 0 1 9 2 8 12 0 59734 59766 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Methanomassiliicoccales;f__Methanomassiliicoccaceae;g__Candidatus Methanomethylophilus;s__Candidatus Methanomethylophilus alvus;t__Candidatus Methanomethylophilus alvus Mx1201 0 0 0 0 0 0 0 33335 33335 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage SEN34;t__ 0 0 0 6 2 0 0 806 814 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium timonense;t__Corynebacterium timonense 5401744 0 0 9 2 0 49 0 50936 50996 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces ciscaucasicus;t__ 0 0 2 0 0 411 0 195379 195792 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Belnapia;s__Belnapia moabensis;t__Belnapia moabensis DSM 16746 0 0 1 0 11 0 0 133754 133766 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus jeotgali;t__Natronococcus jeotgali DSM 18795 0 0 2 0 51 33 0 89511 89597 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Halobellus;s__Halobellus rufus;t__ 0 0 32 71 25 0 0 76768 76897 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconobacter;s__Gluconobacter oxydans;t__Gluconobacter oxydans 621H 0 0 0 0 119 0 32 4011 4397 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinobaculum;s__Actinobaculum massiliense;t__Actinobaculum massiliense ACS-171-V-Col2 0 0 87 0 486 11 0 39826 40410 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus A;t__Simian adenovirus 3 0 0 0 0 0 0 0 684 684 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas subvibrioides;t__Brevundimonas subvibrioides ATCC 15264 0 0 2 0 7 2 0 68894 68905 k__BacteriaPlasmid;p__Chlorobi;c__Chlorobia;o__Chlorobiales;f__Chlorobiaceae;g__Prosthecochloris;s__Prosthecochloris aestuarii;t__Prosthecochloris aestuarii DSM 271 0 0 0 0 0 0 0 1335 1335 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Trueperella;s__Trueperella pyogenes;t__ 5 0 2 0 8 0 0 46752 46767 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__;s__beta proteobacterium AAP51;t__ 0 0 47 0 0 103 0 101657 101807 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium chlorophenolicum;t__Sphingobium chlorophenolicum L-1 0 0 0 16 32 226 0 88713 88987 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kpp10virus;s__Pseudomonas virus PAKP3;t__Pseudomonas phage CHA_P1 0 0 0 0 2 575 556 632 1765 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halorhabdus;s__Halorhabdus utahensis;t__Halorhabdus utahensis DSM 12940 0 0 2 0 0 70 0 62263 62335 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-WAM1;t__ 0 0 0 0 0 6 0 3696 3702 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 1;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Alteromonas phage vB_AmaP_AD45-P;t__Alteromonas phage vB_AmaP_AD45-P1 0 0 0 0 0 0 0 2078 2078 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus oshimai;t__Thermus oshimai JL-2 0 0 2 0 0 285 0 41160 41447 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus oryzae;t__Streptacidiphilus oryzae TH49 0 0 50 0 186 2 0 155882 156120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P087;t__ 0 0 0 0 0 0 0 1201 1201 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola nanhaiensis;t__Pseudooceanicola nanhaiensis DSM 18065 0 0 2 0 1452 91 0 91613 93158 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Blastochloris;s__Blastochloris viridis;t__ 0 1 0 7 0 0 0 74488 74496 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia rhizoxinica;t__Paraburkholderia rhizoxinica HKI 454 0 0 0 0 0 0 0 19721 19893 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sap6virus;s__Enterococcus virus VD13;t__Enterococcus phage VD13 0 0 0 0 0 71 0 1043 1114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus E;t__Simian adenovirus 25 0 0 0 0 0 0 0 730 730 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Verrucomicrobia phage P8625;t__ 0 0 0 0 0 0 0 657 657 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. LS16;t__ 36 0 33 31 76 0 0 76802 77024 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria salsicia;t__ 0 0 241 168 55 364 0 58789 59617 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium ciconiae;t__Corynebacterium ciconiae DSM 44920 0 0 1 0 0 9 0 50861 50871 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__[Propionibacterium] namnetense;t__[Propionibacterium] namnetense SK182B-JCVI 169 0 0 0 5 175 0 48165 48523 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 8;t__ 0 0 0 0 0 0 0 213 213 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia xyli;t__ 4 0 24 190 13 0 0 52778 53009 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Dermabacter;s__Dermabacter vaginalis;t__ 0 0 12 4 0 0 0 47830 47846 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Vibrio phage ICP3;t__ 0 0 0 0 0 136 0 647 783 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Kibdelosporangium;s__Kibdelosporangium phytohabitans;t__ 0 0 29 0 49 0 0 235117 235195 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharothrix;s__Saccharothrix syringae;t__ 0 0 23 0 41 0 0 217244 217308 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus denitrificans;t__Paracoccus denitrificans PD1222 2 0 2 0 20 469 0 91152 91645 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Se1virus;s__Salmonella virus SSE121;t__Salmonella phage SSE121 0 0 0 0 0 7 0 2947 2954 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia virus E112;t__Escherichia phage vB_EcoM_112 0 0 0 0 14 683 0 2672 3369 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia farcinica;t__ 0 0 0 0 0 0 0 55805 56213 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces reticuli;t__ 1 0 20 0 0 899 0 166158 167078 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia sputi;t__Gordonia sputi NBRC 100414 0 0 38 34 0 592 0 98098 98762 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium massiliense;t__Corynebacterium massiliense DSM 45435 0 0 9 1 0 146 0 43456 43612 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pannonibacter;s__Pannonibacter phragmitetus;t__ 0 1 914 0 583 0 0 104875 106373 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Equid alphaherpesvirus 1;t__ 0 0 0 0 0 105 0 2899 3004 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia sihwensis;t__Gordonia sihwensis NBRC 108236 0 0 38 21 0 267 0 82373 82699 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halovivax;s__Halovivax asiaticus;t__Halovivax asiaticus JCM 14624 0 0 0 0 10 0 0 64715 64725 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Aggregatibacter phage S1249;t__ 0 0 0 0 0 0 0 879 879 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf412;t__ 0 0 0 1 7 66 0 68720 68794 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P100virus;s__Listeria virus A511;t__ 0 0 0 0 758 0 0 1994 2752 k__Bacteria;p__Acidobacteria;c__Acidobacteriia;o__Acidobacteriales;f__Acidobacteriaceae;g__Terriglobus;s__Terriglobus sp. TAA 43;t__ 0 0 0 0 11 27 0 98891 98929 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis potens;t__Nocardiopsis potens DSM 45234 0 0 3 1 0 0 0 137939 137943 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bradyrhizobium;s__Bradyrhizobium sp. STM 3843;t__ 0 0 2 2 7 51 0 167963 168025 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCP34O;t__ 0 0 0 0 0 267 0 499 766 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium bifidum;t__Bifidobacterium bifidum PRL2010 0 0 3 0 0 45 0 44245 44293 k__BacteriaPlasmid;p__Aquificae;c__Aquificae;o__Aquificales;f__Aquificaceae;g__Aquifex;s__Aquifex aeolicus;t__Aquifex aeolicus VF5 0 0 0 0 0 0 0 770 789 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus abyssi;t__Pyrococcus abyssi GE5 0 0 0 0 0 79 0 35223 35302 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhodobiaceae;g__Lutibaculum;s__Lutibaculum baratangense;t__Lutibaculum baratangense AMV1 0 0 3 10 0 0 0 85918 85931 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phiSa119;t__ 0 0 0 0 297 347 0 207 851 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Isfahan vesiculovirus;t__Isfahan virus 0 0 0 0 0 0 0 221 221 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter komagatae;t__ 0 0 1 2 5 11 0 73252 73271 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus amylolyticus;t__Natronococcus amylolyticus DSM 10524 0 0 1 0 17 0 0 88220 88238 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Shinella;s__Shinella sp. HZN7;t__ 0 0 0 0 0 0 0 52932 53492 k__Bacteria;p__Chloroflexi;c__Thermomicrobia;o__;f__;g__Thermorudis;s__Thermorudis peleae;t__ 0 0 3 0 0 0 0 58684 58687 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 9;t__ 0 0 0 0 0 0 0 72 72 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sulfidophilum;t__ 0 0 2 0 59 0 0 89027 89088 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Agrotis ipsilon multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 3102 3102 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Bunyamwera orthobunyavirus;t__Bunyamwera virus 0 0 0 0 0 0 0 241 241 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium japonicum;t__Sphingobium japonicum UT26S 54 34 0 17 951 16 0 82860 83932 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf34;t__ 0 0 0 0 4 28 0 78835 78867 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Liberibacter phage SC1;t__ 0 0 0 0 0 275 0 525 800 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCD6356;t__ 0 0 0 0 0 0 0 753 753 k__ArchaeaPlasmid;p__;c__;o__;f__;g__;s__halophilic archaeon DL31;t__ 140 0 0 0 0 0 0 11965 14587 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium tuscaniense;t__Corynebacterium tuscaniense DNF00037 0 0 20 22 0 484 0 43873 44399 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus defluvii;t__ 1 0 8 22 10 111 0 102027 102184 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus thermoleovorans;t__ 0 0 0 0 0 0 0 841 974 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Commensalibacter;s__Commensalibacter sp. MX01;t__ 0 0 0 0 0 0 0 442 442 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Rothia;s__Rothia mucilaginosa;t__Rothia mucilaginosa DY-18 3 0 12 13 22 18 0 45224 45292 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Cypovirus 14;t__ 0 0 0 0 0 0 0 489 489 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces sp. oral taxon 848;t__Actinomyces sp. oral taxon 848 str. F0332 0 0 0 0 3 0 0 50341 50344 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia sp. BMG111209;t__ 0 0 5 4 8 36 0 182788 182841 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Coriobacterium;s__Coriobacterium glomerans;t__Coriobacterium glomerans PW2 0 0 1 0 8 0 0 42304 42313 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Hoyosella;s__Hoyosella subflava;t__Hoyosella subflava DQS3-9A1 0 0 9 22 14 0 0 94731 94776 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter phenanthrenivorans;t__ 0 0 8 3 24 31 47 86291 86404 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium populi;t__Methylobacterium populi BJ001 0 0 1 48 3 292 68972 46692 116008 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__;f__;g__;s__beta proteobacterium AAP65;t__ 0 1 39 0 0 0 0 96641 96681 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas abyssi;t__ 0 0 5 0 53 0 0 79494 79552 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Hydrogenophaga;s__Hydrogenophaga intermedia;t__ 73 79 3 108 305 0 0 104965 105533 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Enterorhabdus;s__Enterorhabdus mucosicola;t__Enterorhabdus mucosicola DSM 19490 0 11 4 0 2 535 0 59587 60139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Bacillus phage SPP1;t__ 0 0 0 0 0 0 0 880 880 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella intestinalis;t__Collinsella intestinalis DSM 13280 0 0 2 0 1 50 0 35931 35984 k__BacteriaPlasmid;p__Proteobacteria;c__Acidithiobacillia;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Acidithiobacillus;s__Acidithiobacillus caldus;t__Acidithiobacillus caldus ATCC 51756 0 0 0 0 0 0 0 3576 4175 k__Archaea;p__;c__;o__;f__;g__;s__halophilic archaeon DL31;t__ 153 0 0 0 0 0 0 58120 58273 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium oculi;t__ 0 0 0 0 5 90 0 48176 48271 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum halopraeferens;t__Azospirillum halopraeferens DSM 3675 1 1 1 2 2 5 0 130053 130065 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus gilardii;t__Cupriavidus gilardii CR3 0 52 20 142 353 110 0 110896 111573 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas sp. AAP120;t__ 0 14 0 1 42 111 0 122622 122790 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum brasilense;t__ 0 2 1 3 0 0 0 60108 60114 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium riegelii;t__ 0 0 111 7 0 252 0 50862 51232 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Dragonfly associated gemykibivirus 1;t__ 0 0 0 0 0 0 0 44 44 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter sp. DG25B;t__ 0 0 0 0 0 0 0 9702 9704 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis jejuensis;t__ 0 0 9 0 7 84 0 201721 201821 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Actinomadura;s__Actinomadura flavalba;t__Actinomadura flavalba DSM 45200 0 0 3 0 12 43 0 123249 123307 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sap6virus;s__Streptococcus virus SPQS1;t__Streptococcus phage SPQS1 0 0 0 0 0 80 0 1086 1166 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeobacter;s__Phaeobacter gallaeciensis;t__Phaeobacter gallaeciensis DSM 26640 0 0 0 0 14 0 0 14141 15259 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas sp. DS20;t__ 0 0 2 0 0 0 0 69504 69506 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Xanthobacter;s__Xanthobacter autotrophicus;t__Xanthobacter autotrophicus Py2 0 4 130 715 31 13 0 105285 106178 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 1;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage B236;t__ 0 0 0 0 69 398 0 397 864 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Planktothrix phage PaV-LD;t__ 0 0 0 0 0 0 0 1905 1905 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces avermitilis;t__Streptomyces avermitilis MA-4680 = NBRC 14893 9 0 9 0 2 842 0 179650 180512 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium asteroides;t__Bifidobacterium asteroides PRL2011 0 0 1 0 8 26 0 43311 43346 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium bovis;t__Corynebacterium bovis DSM 20582 = CIP 54.80 3 0 1 11 0 13 0 49484 49512 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage P88;t__ 0 0 0 0 34 0 0 682 716 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. ARG-1;t__ 0 0 0 6 2 946 0 124866 125820 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb69virus;s__Escherichia virus JS09;t__Escherichia phage vB_EcoM_JS09 0 0 0 0 0 1021 0 2361 3382 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces natalensis;t__Streptomyces natalensis ATCC 27448 0 0 3 0 0 12 0 172904 172919 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinobaculum;s__Actinobaculum suis;t__ 59 0 71 0 67 0 0 46815 47012 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas huabeiensis;t__Luteimonas huabeiensis HB2 3 774 813 2 205 28 0 83930 85755 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Citreicella;s__Citreicella sp. 357;t__ 0 4 1 0 188 0 0 91414 91634 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage PaoP5;t__ 0 0 0 0 954 0 0 915 1869 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas sp. Root608;t__ 0 0 3 0 0 72 0 55700 55775 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis benzoatilytica;t__Amycolatopsis benzoatilytica AK 16/65 0 1 60 0 34 142 0 173792 174029 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax isoporae;t__Roseivivax isoporae LMG 25204 34 0 7 0 278 0 0 97266 97585 k__Bacteria;p__Thermotogae;c__Thermotogae;o__Thermotogales;f__Thermotogaceae;g__Thermotoga;s__Thermotoga caldifontis;t__Thermotoga caldifontis AZM44c09 0 0 0 0 0 0 0 40298 40298 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces qinglanensis;t__ 0 0 23 0 0 133 0 131655 131811 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. JS623;t__ 0 0 0 2 0 81 0 129215 129298 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage vB_BtS_BMBtp3;t__ 0 0 0 0 1 8 0 1018 1027 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Capillovirus;s__Yacon virus A;t__ 0 0 0 0 0 0 0 127 127 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Azohydromonas;s__Azohydromonas australica;t__Azohydromonas australica DSM 1124 0 1 0 30 0 0 0 174552 174583 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Ideonella;s__Ideonella sp. B508-1;t__ 2 4 0 21 38 1 0 97478 97544 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage 2A;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 931 931 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas sp. Leaf363;t__ 0 0 2 0 8 46 0 62481 62537 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Allochromatium;s__Allochromatium vinosum;t__Allochromatium vinosum DSM 180 0 0 0 0 0 0 0 2808 2841 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobacteraceae;g__Desulfobacterium;s__Desulfobacterium autotrophicum;t__Desulfobacterium autotrophicum HRM2 0 0 0 0 0 0 0 1326 1374 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paenibacillus phage Xenia;t__ 0 0 0 221 0 0 0 601 822 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Synechococcus phage S-SKS1;t__ 0 0 0 0 0 0 0 4160 4160 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis salina;t__Nocardiopsis salina YIM 90010 0 0 3 1 0 109 0 115458 115571 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium ulceribovis;t__Corynebacterium ulceribovis DSM 45146 0 0 0 5 0 8 0 45980 45993 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albus;t__Streptomyces albus subsp. albus 1 0 6 0 7 270 0 152187 152471 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halapricum;s__Halapricum salinum;t__ 1 0 6 0 4 0 0 69014 69025 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Rhizobacter;s__Rhizobacter sp. Root29;t__ 0 0 1 19 49 0 0 129661 129730 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Rhizobacter;s__Rhizobacter sp. Root404;t__ 4 0 4 19 42 4 0 105390 105463 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Intrasporangium;s__Intrasporangium oryzae;t__Intrasporangium oryzae NRRL B-24470 16 0 53 14 9 2 0 92372 92466 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus antranikianii;t__Thermus antranikianii DSM 12462 1 0 2 0 6 3076 0 40126 43211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Choristoneura fumiferana multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2591 2591 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Cyanobium;s__Cyanobium sp. PCC 7001;t__ 0 0 1 39 16 0 0 56565 56621 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas diminuta;t__Brevundimonas diminuta ATCC 11568 37 0 5 0 1 28 0 64159 64230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Choristoneura murinana nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2493 2493 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Metapneumovirus;s__Avian metapneumovirus;t__ 0 0 0 0 0 0 0 281 281 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halopiger;s__Halopiger djelfimassiliensis;t__ 0 0 1 0 46 10 0 74939 74996 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces catenulae;t__ 0 0 5 0 5 375 0 140382 140767 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora cheerisanensis;t__Kitasatospora cheerisanensis KCTC 2395 0 0 143 0 293 74 0 159852 160362 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. CB02488;t__ 0 0 1 0 0 71 0 177710 177782 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter sp. SW2;t__ 0 0 0 0 22 4 0 70149 70175 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas wittichii;t__Sphingomonas wittichii RW1 0 0 3 3 478 70 0 107091 107645 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium imitans;t__ 138 0 62 9 0 349 0 50712 51270 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium scardovii;t__Bifidobacterium scardovii JCM 12489 = DSM 13734 0 0 0 0 4 0 0 63162 63166 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Acidipropionibacterium;s__Acidipropionibacterium jensenii;t__Acidipropionibacterium jensenii DSM 20535 0 0 116 0 1 233 0 60108 60458 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter sp. NAP1;t__ 0 0 0 88 5 13 0 65194 65300 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosospira;s__Nitrosospira multiformis;t__Nitrosospira multiformis ATCC 25196 0 0 0 0 0 0 0 952 997 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-RIM2;t__Synechococcus phage S-RIM2 R1_1999 0 0 0 30 3 10 0 3465 3508 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alicyclobacillaceae;g__Alicyclobacillus;s__Alicyclobacillus acidocaldarius;t__Alicyclobacillus acidocaldarius subsp. acidocaldarius 0 0 0 0 0 0 0 3435 3735 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus actinosclerus;t__ 0 0 0 0 0 0 0 65286 65286 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis dassonvillei;t__Nocardiopsis dassonvillei subsp. dassonvillei 0 1 20 6 0 563 0 130274 130864 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Cytophagaceae;g__Fibrella;s__Fibrella aestuarina;t__Fibrella aestuarina BUZ 2 0 0 0 0 0 0 0 3236 3236 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. KC8;t__ 0 0 1 0 12 33 0 81306 81352 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus E;t__Simian adenovirus 16 0 0 0 0 0 0 0 703 703 k__Bacteria;p__Actinobacteria;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter aplysinae;t__ 0 1 0 0 0 0 0 63677 63678 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__;g__;s__haloarchaeon 3A1_DGR;t__ 0 0 11 4 0 0 0 57572 57587 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella cinnabarina;t__Loktanella cinnabarina LL-001 0 0 3 0 56 71 0 77433 77563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage SP-10;t__ 0 0 0 0 0 0 0 2879 2879 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb69virus;s__Escherichia virus RB69;t__Enterobacteria phage RB69 0 0 0 0 0 0 0 3351 3351 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis terrae;t__Sphingopyxis terrae NBRC 15098 0 0 0 0 0 0 0 79581 79581 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;t__Halalkalicoccus jeotgali B3 0 0 5 0 0 0 0 56175 56180 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halosimplex;s__Halosimplex carlsbadense;t__Halosimplex carlsbadense 2-9-1 0 0 65 0 1 0 0 93732 93798 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paenirhodobacter;s__Paenirhodobacter enshiensis;t__ 7 0 0 0 50 0 0 68523 68580 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Haladaptatus;s__Haladaptatus paucihalophilus;t__Haladaptatus paucihalophilus DX253 0 0 8 0 1 0 0 86331 86340 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Dietziaceae;g__Dietzia;s__Dietzia alimentaria;t__Dietzia alimentaria 72 0 0 43 19 0 0 0 66922 66984 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces davawensis;t__Streptomyces davawensis JCM 4913 0 0 11 0 2 1061 0 188226 189300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 69;t__ 0 0 0 0 14 286 0 554 854 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces niveus;t__Streptomyces niveus NCIMB 11891 0 0 20 0 8 576 0 166098 166702 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halopiger;s__Halopiger xanaduensis;t__Halopiger xanaduensis SH-6 0 0 2 0 48 0 0 73310 73360 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage EW;t__ 0 0 0 0 0 0 0 905 905 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum lacusprofundi;t__Halorubrum lacusprofundi ATCC 49239 0 0 11 1 5 31 0 65173 65221 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium kansasii;t__Mycobacterium kansasii ATCC 12478 0 0 0 0 0 55 0 128590 128645 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P1virus;s__Salmonella phage SJ46;t__ 0 0 0 8 2 0 0 2008 2068 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014g;t__ 1 0 0 10 40 130 0 3316 3497 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Nigalana;t__ 0 0 0 0 340 1289 0 1631 3260 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Blastomonas;s__Blastomonas sp. AAP53;t__ 52 0 1 7 15 66 0 72134 72275 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StauST398-5;t__ 7 0 0 0 534 28 0 297 866 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Vibrio phage VBP32;t__ 0 0 0 0 0 0 0 1534 1534 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Caenispirillum;s__Caenispirillum salinarum;t__Caenispirillum salinarum AK4 7 7 1 0 4 0 0 98915 98934 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. 77;t__ 0 1 1 20 7 85 0 93181 93295 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacterial phage mEp390;t__ 0 0 0 0 0 11 0 789 800 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEpX1;t__ 0 0 0 10 14 401 0 406 831 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacteria phage HK544;t__ 0 0 0 21 416 23 0 343 803 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacteria phage HK542;t__ 0 0 0 26 346 25 0 382 779 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK446;t__ 0 0 0 0 0 211 0 569 780 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacteria phage HK106;t__ 0 0 0 36 398 0 0 395 829 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacterial phage mEp234;t__ 1 0 0 39 192 451 0 108 791 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi11virus;s__Streptococcus phage Sfi11;t__ 0 0 0 0 392 45 0 359 796 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Edens01;t__ 0 0 6 5 27 5 0 72642 72685 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes rectilineatus;t__ 1 0 6 0 16 89 0 205706 205818 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Oryctes rhinoceros nudivirus;t__ 0 0 0 0 0 0 0 2552 2552 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__V5virus;s__Escherichia virus JES2013;t__Escherichia phage JES2013 0 0 0 0 0 1015 0 1723 2738 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halobiforma;s__Halobiforma lacisalsi;t__Halobiforma lacisalsi AJ5 0 0 2 0 119 31 0 86468 86620 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Escherichia virus slur09;t__Escherichia phage slur09 0 0 0 0 0 0 0 2235 2235 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Parachlamydiales;f__Waddliaceae;g__Waddlia;s__Waddlia chondrophila;t__Waddlia chondrophila WSU 86-1044 0 0 0 0 0 0 0 296 311 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus virus 9871;t__ 8 0 0 0 18 500 0 128 654 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. FB24;t__ 25 0 15 39 318 4 0 93577 93978 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis sp. CNT312;t__ 0 0 7 1 1 99 0 93343 93451 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Haloterrigena;s__Haloterrigena turkmenica;t__Haloterrigena turkmenica DSM 5511 0 0 6 0 61 11 0 77702 77780 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinokineospora;s__Actinokineospora enzanensis;t__Actinokineospora enzanensis DSM 44649 0 0 11 0 13 29 0 162150 162203 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium rhodesiae;t__Mycobacterium rhodesiae JS60 0 0 2 3 0 424 4 145143 145576 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Felid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2715 2715 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus;t__ 0 0 0 0 0 0 0 629 629 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiCDHM13;t__ 0 0 0 5 570 69 0 27 671 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN04;t__ 0 0 0 0 0 0 0 517 517 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage vB_LmoS_293;t__ 0 0 0 0 0 263 0 549 812 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei dimarhabdovirus virus 1;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Perinet vesiculovirus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage epsilon34;t__ 0 0 0 11 0 554 0 295 860 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Salimicrobium;s__Salimicrobium jeotgali;t__ 0 0 0 0 0 0 0 1450 1562 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage PH10;t__ 0 0 0 0 0 0 0 625 625 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobales virus YNP1;t__ 0 0 0 0 0 0 0 771 771 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Ilheus virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Nilaparvata lugens reovirus;t__ 0 0 0 0 0 0 0 556 556 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage IME-EFm1;t__ 0 0 0 0 0 0 0 851 851 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus phoenicis;t__ 4 0 0 0 0 23 0 75942 75969 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Yellowstone lake phycodnavirus 1;t__ 0 0 0 0 0 0 0 3565 3565 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Bathycoccus sp. RCC1105 virus BpV;t__Bathycoccus sp. RCC1105 virus BpV1 0 0 0 0 0 0 0 3970 3970 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Avastrovirus;s__Turkey astrovirus;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Mycoplasma phage MAV1;t__ 0 0 0 0 0 0 0 312 312 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Pyrodictiaceae;g__Pyrodictium;s__Pyrodictium delaneyi;t__ 0 0 0 0 0 47 0 40429 40476 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Mumps rubulavirus;t__ 0 0 0 0 0 0 0 307 307 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ampullaviridae;o__;f__;g__Ampullavirus;s__Acidianus bottle-shaped virus 2;t__ 0 0 0 0 0 0 0 450 450 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Abouovirus;s__Brevibacillus virus Abouo;t__Brevibacillus phage Abouo 0 0 0 0 2 626 0 283 911 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage Aurora;t__ 0 0 0 0 0 17 0 501 518 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium aromaticivorans;t__Mycobacterium aromaticivorans JS19b1 = JCM 16368 0 0 1 4 0 849 0 125089 125943 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-SSM7;t__ 0 0 0 0 0 0 0 4657 4657 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Negevirus;s__Piura virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiBHN167;o__;f__;g__;s__;t__ 0 7 0 0 0 0 0 740 747 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Sunguru virus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Secunda5virus;s__Aeromonas virus AS4;t__Aeromonas phage phiAS4 0 0 0 0 0 0 0 3277 3277 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Desulfurococcus;s__Desulfurococcus amylolyticus;t__Desulfurococcus amylolyticus DSM 16532 0 0 0 1 2 0 1027 26652 27682 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiSM101;t__ 0 0 0 0 0 0 0 761 761 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Psittaciform 2 bornavirus;t__Parrot bornavirus 5 0 0 0 0 0 0 0 179 179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Skunkpox virus;t__ 0 0 0 0 0 3 0 4453 4456 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus buchneri;t__Lactobacillus buchneri CD034 0 0 0 0 0 8 0 918 1248 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 56;t__ 0 0 0 0 0 0 0 202 202 k__Bacteria;p__Chloroflexi;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroflexus;s__Chloroflexus aurantiacus;t__Chloroflexus aurantiacus J-10-fl 0 0 0 2 0 21 0 105147 105170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Liberibacter phage SC2;t__ 0 0 0 0 0 0 0 779 779 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL309;t__ 0 0 0 0 0 44 0 694 738 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Chelatococcus;s__Chelatococcus sambhunathii;t__ 0 0 4 88 0 0 0 87289 87381 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronorubrum;s__Natronorubrum bangense;t__Natronorubrum bangense JCM 10635 0 0 1 0 30 1036 0 81042 82109 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces bikiniensis;t__ 0 0 8 0 1 875 0 146683 147567 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Halobacillus;s__Halobacillus halophilus;t__Halobacillus halophilus DSM 2266 0 0 0 0 0 0 0 384 384 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinopolysporales;f__Actinopolysporaceae;g__Actinopolyspora;s__Actinopolyspora halophila;t__Actinopolyspora halophila DSM 43834 0 0 11 0 0 0 0 107053 107064 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Dunaliella viridis virus SI2;t__ 0 0 0 0 0 0 0 746 746 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sextaecvirus;s__Staphylococcus virus Sextaec;t__Staphylococcus phage 6ec 0 0 0 0 0 398 0 1477 1875 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes globisporus;t__Actinoplanes globisporus DSM 43857 0 0 23 0 5 50 0 219527 219605 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Ferrimicrobium;s__Ferrimicrobium acidiphilum;t__Ferrimicrobium acidiphilum DSM 19497 0 0 0 0 4 0 0 58328 58332 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halopiger;s__Halopiger salifodinae;t__ 0 0 3 0 40 16 0 86796 86855 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 4;t__ 0 0 0 0 0 0 0 180 180 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Roseomonas;s__Roseomonas aerilata;t__Roseomonas aerilata DSM 19363 0 0 0 0 0 1 0 128287 128288 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Fruit bat alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2989 2989 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__[Propionibacterium] humerusii;t__[Propionibacterium] humerusii P08 0 0 2 0 2 1 0 52421 52426 k__Bacteria;p__Tenericutes;c__Mollicutes;o__Mycoplasmatales;f__Mycoplasmataceae;g__Mycoplasma;s__Mycoplasma haemofelis;t__Mycoplasma haemofelis Ohio2 0 0 0 0 0 0 0 23118 23118 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter sphaeroides;t__Rhodobacter sphaeroides 2.4.1 0 0 2 0 32 0 148 82447 82629 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Oenococcus phage phi9805;t__ 0 0 0 0 0 172 0 750 922 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Natranaerobiales;f__Natranaerobiaceae;g__Natranaerobius;s__Natranaerobius thermophilus;t__Natranaerobius thermophilus JW/NM-WN-LF 0 0 0 0 0 0 0 516 516 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cd119virus;s__Clostridium virus phiC2;t__ 0 0 0 0 0 0 0 1130 1130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Slashvirus;s__Bacillus virus Staley;t__Bacillus phage Staley 0 0 0 0 0 667 0 966 1633 k__Viruses;p__unclassified bacterial viruses;c__Enterobacteria phage YYZ-2008;o__;f__;g__;s__;t__ 544 0 0 0 0 0 0 547 1095 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium chlorophenolicum;t__ 0 0 0 0 0 24 0 147434 147459 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylocystaceae;g__Methylopila;s__Methylopila sp. 73B;t__ 0 0 6 30 0 1 0 87616 87653 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Crossroads;t__ 0 0 0 0 870 72 0 580 1522 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Borreliaceae;g__Borrelia;s__Borrelia miyamotoi;t__Borrelia miyamotoi LB-2001 0 0 0 0 0 0 0 613 613 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Cowpox virus;t__ 0 0 0 0 0 892 0 3597 4489 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Nona33virus;s__Escherichia virus 24B;t__Escherichia phage vB_EcoP_24B 1 0 0 23 108 868 0 138 1153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GordDuk1;t__ 0 0 0 0 0 0 0 1525 1525 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia alba;t__Nesterenkonia alba DSM 19423 1 0 5 9 52 11 0 51695 51773 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Citrobacter phage vB_CfrM_CfP1;t__ 0 0 0 0 11 2471 0 1122 3604 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 9;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Ovine enzootic nasal tumor virus;t__ 0 0 0 0 0 1 0 147 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_ChrisDB;t__ 3 0 0 0 0 0 0 4893 4896 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;t__ 0 0 4 2 0 0 0 73498 73504 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacter phage Arya;t__ 0 0 0 0 0 0 0 838 838 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Xipapillomavirus;s__Xipapillomavirus 3;t__Rangifer tarandus papillomavirus 2 0 0 0 0 0 0 0 145 145 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Microbispora;s__Microbispora rosea;t__Microbispora rosea subsp. nonnitritogenes 0 0 15 0 15 135 0 172690 172855 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Flaviflexus;s__Flaviflexus massiliensis;t__ 0 0 1 0 0 0 0 52608 52609 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cr3virus;s__Cronobacter virus CR9;t__Cronobacter phage CR9 0 0 0 0 0 15 0 3023 3038 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius indicus;t__ 0 0 0 0 22 113 0 120909 121044 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Ag1;t__ 0 0 0 0 16 0 0 78485 78501 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Bovine fever ephemerovirus;t__Bovine ephemeral fever virus 0 0 0 0 0 0 0 297 297 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter capsulatus;t__Rhodobacter capsulatus SB 1003 6 0 2 0 74 7 0 74690 74779 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium angulatum;t__Bifidobacterium angulatum DSM 20098 = JCM 7096 0 1 1 0 9 228 0 40200 40439 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium maritypicum;t__Microbacterium maritypicum MF109 1 0 0 0 2 155 0 79288 79446 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus deserti;t__Deinococcus deserti VCD115 0 0 0 0 0 0 0 20529 20706 k__Viruses;p__dsDNA viruses, no RNA stage;c__Bicaudaviridae;o__;f__;g__;s__Sulfolobus virus STSV1;t__ 0 0 0 0 0 0 0 1505 1505 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StB12;t__ 0 0 0 0 0 31 0 863 894 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage phAPEC8;t__ 0 0 0 0 0 0 0 2954 2954 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Raccoon-associated polyomavirus 2;t__ 0 0 0 0 0 0 0 104 104 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax mucosum;t__Haloferax mucosum ATCC BAA-1512 0 0 15 0 2 75 0 67252 67344 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Candidatus Photodesmus;s__Candidatus Photodesmus katoptron;t__Candidatus Photodesmus katoptron Akat1 0 0 0 0 0 0 0 289 289 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Feline morbillivirus;t__ 0 0 0 0 0 0 0 320 320 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__;s__Perigonia lusca single nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2654 2654 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Klebsiella phage vB_KpnM_KpV477;t__ 0 0 0 0 0 0 0 3365 3365 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas virus 65;t__ 0 0 0 0 0 0 0 4704 4704 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiETA;t__ 0 0 0 0 22 304 0 535 861 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus nematophila;t__Xenorhabdus nematophila ATCC 19061 0 0 0 4 0 0 0 2982 3106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage S-TIM5;t__ 0 0 0 0 0 2 0 3226 3228 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. ZNC0032;t__ 259 1 4 266 0 3 0 95868 96494 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Ebolavirus;s__Bundibugyo ebolavirus;t__ 0 0 0 0 0 0 0 378 378 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus G7C;t__Escherichia phage vB_EcoP_G7C 0 0 0 0 0 24 0 1434 1458 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Ralstonia phage RSS20;t__ 0 0 0 0 60 0 0 33 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage WG01;t__ 0 0 0 0 1866 158 0 1374 3398 k__BacteriaPlasmid;p__Tenericutes;c__Mollicutes;o__Acholeplasmatales;f__Acholeplasmataceae;g__Candidatus Phytoplasma;s__Peanut witches'-broom phytoplasma;t__Peanut witches'-broom phytoplasma NTU2011 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Schizot4virus;s__Vibrio phage VH7D;t__ 0 0 0 0 0 10 0 4929 4939 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus gobiensis;t__Deinococcus gobiensis I-0 0 0 0 0 0 0 0 25344 25367 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter chromiiresistens;t__Leucobacter chromiiresistens JG 31 0 0 19 48 8 37 1696 59396 61204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__S16virus;s__Salmonella virus S16;t__Salmonella phage vB_SenMS16 0 0 0 0 0 0 0 3204 3204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi14:2;t__ 0 0 0 0 9 0 0 1999 2008 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cba181virus;s__Cellulophaga virus Cba171;t__Cellulophaga phage phi17:1 0 0 0 0 0 0 0 775 775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Ostreococcus tauri virus 2;t__ 0 0 0 0 118 0 0 3568 3686 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudoalteromonas phage H101;t__ 0 0 0 0 0 0 0 2638 2638 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage cdtI;t__ 0 0 0 48 0 3 0 889 940 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Achimota rubulavirus 1;t__Achimota virus 1 0 0 0 0 0 0 0 312 312 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium populi;t__ 0 71 47 4 0 33 8 139989 140152 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei endorna-like virus 1;t__ 0 0 0 0 0 0 0 273 273 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb69virus;s__Escherichia virus HX01;t__Escherichia phage HX01 0 0 0 0 0 0 0 3383 3383 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014h;t__ 0 0 0 0 2 9 0 3775 3786 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi21dt1virus;s__Streptococcus phage 7201;t__ 0 0 0 0 1 4 0 704 709 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus SS3e;t__Salmonella phage SS3e 0 0 0 0 0 0 0 815 815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage phiadh;t__ 0 0 0 0 0 0 0 875 875 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Chicken associated gemycircularvirus 2;t__Faeces associated gemycircularvirus 17 0 0 0 0 0 0 0 44 44 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Knoellia;s__Knoellia sinensis;t__Knoellia sinensis KCTC 19936 0 0 36 38 18 6 0 79527 79625 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium camporealensis;t__ 0 0 7 10 0 208 0 48797 49022 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. Tu6071;t__ 16 3 15 0 6 396 0 146747 147183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus phiEco32;t__ 0 0 0 0 0 0 0 1551 1551 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Bhanja virus;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp51virus;s__Bacillus virus CP51;t__Bacillus phage CP-51 0 0 0 0 0 0 0 2773 2773 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Terribacillus;s__Terribacillus aidingensis;t__ 0 0 0 0 0 0 0 1768 1768 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Cba41virus;s__Cellulophaga virus Cba41;t__Cellulophaga phage phi4:1 0 0 0 0 0 0 0 2917 2917 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 50101;t__ 0 0 0 0 0 506 0 133 639 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Mastotermes darwiniensis);t__Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 0 0 0 0 0 0 0 61 61 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Henipavirus;s__Cedar henipavirus;t__Cedar virus 0 0 0 0 0 0 0 363 363 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Mesta yellow vein mosaic virus-associated DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__ArchaeaPlasmid;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermofilaceae;g__Thermofilum;s__Thermofilum pendens;t__Thermofilum pendens Hrk 5 0 0 0 0 0 0 0 630 630 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl betasatellite;t__ 0 0 0 0 0 0 0 28 28 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai zhaovirus-like virus 1;t__ 0 0 0 0 0 0 0 108 108 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia amarae;t__Gordonia amarae NBRC 15530 0 0 1 20 0 31 0 105920 105972 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage phiFL4A;t__ 0 0 0 0 3 0 0 754 757 k__Archaea;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus nautili;t__ 0 0 0 0 10 43 0 39474 39527 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 11;t__ 0 0 0 0 27 583 0 262 872 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Botrytis cinerea negative-stranded RNA virus 1;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Ap22virus;s__Acinetobacter virus AbC62;t__Acinetobacter phage YMC-13-01-C62 0 0 0 0 0 0 0 896 896 k__Bacteria;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Porphyromonadaceae;g__Porphyromonas;s__Porphyromonas catoniae;t__Porphyromonas catoniae ATCC 51270 0 2 0 0 0 87 0 40669 40758 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Virgibacillus;s__Virgibacillus halodenitrificans;t__ 0 0 0 0 0 0 0 956 956 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus pimensis;t__Deinococcus pimensis DSM 21231 1 0 0 0 0 6 0 91717 91724 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Banana bract mosaic virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum leaf curl betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P70virus;s__Listeria virus LP114;t__Listeria phage LP-114 0 0 0 0 0 1001 0 332 1333 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi21dt1virus;s__Streptococcus phage Sfi19;t__ 0 0 0 0 14 252 0 481 747 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage 20617;o__;f__;g__;s__;t__ 54 0 0 0 0 0 0 921 975 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Tistrella;s__Tistrella mobilis;t__Tistrella mobilis KA081020-065 0 0 0 0 0 0 0 50532 51864 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Herbidospora;s__Herbidospora sakaeratensis;t__ 0 0 6 0 0 0 0 171567 171573 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter vulgaris;t__ 0 0 0 20 5 22 0 57105 57152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-SSM7;t__ 0 0 0 0 0 0 0 3643 3643 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Ovine atadenovirus D;t__Ovine adenovirus 7 0 0 0 0 0 0 0 591 591 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEp043 c-1;t__ 0 0 0 0 0 54 0 801 855 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Listeria phage LP-048;t__ 0 0 0 0 1546 87 0 1027 2660 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage BK5-T;t__ 0 0 0 0 0 33 0 767 800 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces virginiae;t__ 0 0 7 0 11 545 0 165567 166130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Bicaudaviridae;o__;f__;g__;s__Sulfolobus virus STSV2;t__ 0 0 0 0 0 10 0 1512 1522 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage HY03;t__ 0 0 0 0 741 23 0 2651 3415 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. KMS;t__ 0 0 2 1 0 1229 0 113512 114744 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 80alpha;t__ 0 0 0 0 14 784 0 79 877 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL095N00;t__Propionibacterium phage PHL095N00 0 0 0 0 10 127 0 458 595 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014f;t__ 0 0 0 0 0 0 0 4562 4562 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi21dt1virus;s__Streptococcus phage Sfi21;t__ 0 0 0 0 0 0 0 814 814 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StB20-like;t__ 0 0 0 0 0 7 0 806 813 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__Simian foamy virus;t__ 0 0 0 0 0 0 0 264 264 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Paenarthrobacter;s__Paenarthrobacter aurescens;t__Paenarthrobacter aurescens TC1 9 0 21 23 38 0 0 91862 91953 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax volcanii;t__Haloferax volcanii DS2 0 0 4 0 0 0 0 22570 23297 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Azospirillum;s__Azospirillum lipoferum;t__Azospirillum lipoferum 4B 0 0 0 0 0 3 0 75927 77152 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Vibrio phage CTX;t__ 0 0 0 0 0 0 0 212 212 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora sp. MBT63;t__ 19 0 84 0 107 0 0 193615 193825 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia virus AR1;t__Escherichia phage AR1 0 0 0 0 6 1503 0 1839 3348 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage SMSAP5;t__ 0 0 0 1 0 13 0 897 911 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Muvirus;s__Escherichia virus Mu;t__ 0 0 0 0 1 266 0 467 734 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus Bigbertha;t__Bacillus phage BigBertha 0 0 0 0 617 755 0 1932 3304 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus jj50;t__ 0 0 0 0 0 277 0 272 549 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage r1t;t__ 0 0 0 0 0 12 0 654 666 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage Gamma;t__ 0 0 0 0 0 0 0 745 745 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Wbetavirus;s__Bacillus virus Wbeta;t__ 0 0 0 0 650 0 0 167 817 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Bacillariodnavirus LDMD-2013;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage X2;t__ 0 0 0 0 36 121 0 711 868 k__Archaea;p__Euryarchaeota;c__Thermoplasmata;o__Thermoplasmatales;f__;g__;s__Thermoplasmatales archaeon BRNA1;t__ 0 0 8 0 0 0 0 29214 29222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cecivirus;s__Bacillus virus IEBH;t__ 0 0 0 0 0 2 0 1060 1062 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__Ambystoma tigrinum virus;t__ 0 0 0 0 29 223 0 1874 2126 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum californiense;t__Halorubrum californiensis DSM 19288 0 0 119 0 2 230 0 73144 73495 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tobacco curly shoot alphasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCP39-O;t__ 0 0 0 0 0 0 0 775 775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiMMP03;t__ 0 0 0 0 820 42 0 183 1045 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium haemophilum;t__Mycobacterium haemophilum DSM 44634 0 0 0 1 0 31 0 84683 84715 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus fervens;t__Methanocaldococcus fervens AG86 0 0 0 0 0 0 0 443 443 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Ralstonia phage RSP15;t__ 0 0 0 0 0 0 0 3352 3352 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Hapavirus;s__Wongabel hapavirus;t__ 0 0 0 0 0 0 0 263 263 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium thermophilum;t__Bifidobacterium thermophilum RBL67 37 25 0 0 0 43 0 45727 45832 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_Asesino;t__ 0 0 0 14 0 0 0 4911 4925 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Mpulungu bufavirus;t__ 0 0 0 0 0 0 0 92 92 k__BacteriaPlasmid;p__Thermotogae;c__Thermotogae;o__Petrotogales;f__;g__Marinitoga;s__Marinitoga piezophila;t__Marinitoga piezophila KA3 0 0 0 0 0 0 0 267 267 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia virus Ime09;t__Escherichia phage ime09 0 0 0 0 4 351 0 2974 3329 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage vB_SenS-Ent2;t__ 0 0 0 0 141 0 0 700 841 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus bIL170;t__ 0 0 0 0 0 0 0 635 635 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Sulfolobus islandicus rod-shaped virus 2;t__ 0 0 0 0 0 1 0 707 708 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sextaecvirus;s__Staphylococcus virus SEP9;t__Staphylococcus phage vB_SepS_SEP9 0 0 0 0 0 0 0 1848 1848 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Capsicum chlorosis virus;t__ 0 0 0 0 0 0 0 339 339 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-36;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 40 40 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas;s__Natronomonas pharaonis;t__Natronomonas pharaonis DSM 2160 0 0 2 0 0 0 0 51902 51904 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage S-RIM32;t__ 0 0 0 6 0 1 0 3881 3888 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp. Root96;t__ 1 1 0 2 48 62 0 88137 88251 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Pacnes201215;t__Propionibacterium phage Pacnes 2012-15 0 0 0 0 0 0 0 594 594 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Canine mastadenovirus A;t__Canine adenovirus 2 0 0 0 0 0 0 0 626 626 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aestuariivita;s__Aestuariivita atlantica;t__ 0 0 0 0 9 0 0 86738 86747 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium genitalium;t__Corynebacterium genitalium ATCC 33030 0 0 17 16 0 213 0 46743 46989 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hp1virus;s__Haemophilus phage HP1;t__ 0 0 0 0 0 0 0 647 647 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger mucosus;t__Salipiger mucosus DSM 16094 1 1 0 0 60 0 0 113197 113259 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora xinjiangensis;t__Saccharomonospora xinjiangensis XJ-54 0 0 15 0 21 16 0 95413 95465 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Brachybacterium;s__Brachybacterium muris;t__Brachybacterium muris UCD-AY4 2 0 65 191 8 88 0 64708 65062 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Allokutzneria;s__Allokutzneria albata;t__ 0 0 13 0 20 0 0 170019 170052 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Sulfitobacter phage EE36phi1;t__ 0 0 0 0 0 38 0 1428 1466 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Promicromonospora;s__Promicromonospora sukumoe;t__Promicromonospora sukumoe 327MFSha3.1 2 0 9 12 9 0 0 125007 125039 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus frigens;t__Deinococcus frigens DSM 12807 0 0 0 0 0 62 0 80280 80342 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas syringae group genomosp. 3;t__Pseudomonas syringae pv. tomato 0 0 0 0 0 0 0 2644 2820 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Enterobacteria phage WPhi;t__ 0 0 0 0 0 122 0 531 653 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage vB_AbaM_Acibel004;t__ 0 0 0 0 0 0 0 1994 1994 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage phiMR11;t__ 0 0 0 0 0 0 0 860 860 k__Viruses;p__unclassified bacterial viruses;c__Synechococcus phage S-CAM22;o__;f__;g__;s__;t__ 5 0 0 0 0 0 0 3441 3446 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus morrhuae;t__Halococcus morrhuae DSM 1307 0 0 55 0 0 896 0 58552 59503 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Marinithermus;s__Marinithermus hydrothermalis;t__Marinithermus hydrothermalis DSM 14884 0 0 2 0 12 0 0 45369 45383 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas sacchari;t__ 0 0 0 0 0 0 0 10090 10173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bovine mastadenovirus B;t__Bovine adenovirus 3 0 0 0 0 0 0 0 688 688 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bovine mastadenovirus B;t__ 0 0 0 0 0 0 688 0 688 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HSTV-2;t__ 0 0 0 0 0 0 0 1370 1370 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium heraklionense;t__ 0 0 1 3 0 9 0 102040 102053 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Eldridge;t__ 0 0 0 0 0 0 0 3317 3317 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium ureicelerivorans;t__ 1 0 120 9 0 372 0 45090 45592 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Salmonella phage STP4-a;t__ 0 0 0 0 1576 0 0 1622 3198 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__S16virus;s__Salmonella virus STML198;t__Salmonella phage STML-198 0 0 0 0 145 960 0 2056 3161 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Inhangapi virus;t__ 0 0 0 0 0 0 0 240 240 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium stellenboschense;t__ 21 0 1 0 2 213 0 55944 56181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCD146;t__ 0 0 0 12 0 373 0 445 830 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacterales Family III. Incertae Sedis;g__Caldicellulosiruptor;s__Caldicellulosiruptor bescii;t__Caldicellulosiruptor bescii DSM 6725 0 0 0 0 0 0 0 218 237 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cellulophaga phage phi38:1;t__ 0 0 0 0 0 0 0 1450 1450 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Mesorhizobium;s__Mesorhizobium loti;t__Mesorhizobium loti NZP2037 0 1 0 38 0 54 0 140053 140146 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. 4-46;t__ 0 0 4 6 6 96 0 153069 153181 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces violaceusniger;t__Streptomyces violaceusniger Tu 4113 4 0 18 0 11 661 0 212448 213142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage EFC-1;t__ 0 0 0 0 0 26 0 779 805 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__Elioraea;s__Elioraea tepidiphila;t__Elioraea tepidiphila DSM 17972 1 1 4 17 0 0 0 85915 85938 k__Viruses;p__dsDNA viruses, no RNA stage;c__Tectiviridae;o__;f__;g__Tectivirus;s__Bacillus phage Wip1;t__ 0 0 0 0 0 0 0 286 286 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__;s__Sulfolobus islandicus rudivirus 3;t__ 0 0 0 0 5 0 0 654 659 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum lipolyticum;t__Halorubrum lipolyticum DSM 21995 0 0 53 0 2 169 0 68202 68426 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Roseomonas;s__Roseomonas gilardii;t__ 0 0 0 0 0 0 0 100606 100606 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces hongkongensis;t__ 0 0 16 0 2 0 0 41177 41195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cr3virus;s__Cronobacter virus PBES02;t__Cronobacter phage PBES 02 0 0 0 0 0 1861 0 1133 2994 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter chlorophenolicus;t__Pseudarthrobacter chlorophenolicus A6 25 0 18 25 132 181 0 87525 87906 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Tupaia hepatovirus A;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Escherichia virus T1;t__ 0 0 0 0 0 0 0 976 976 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrialba;s__Natrialba hulunbeirensis;t__Natrialba hulunbeirensis JCM 10989 0 0 1 0 0 0 0 83099 83100 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium salinarum;t__Halobacterium salinarum R1 0 0 3 1 0 0 0 40015 40019 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia asembonensis;t__ 0 0 0 0 0 0 0 423 433 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__West Caucasian bat lyssavirus;t__ 0 0 0 0 0 0 0 245 245 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 28;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pocjvirus;s__Shigella virus POCJ13;t__Shigella phage POCJ13 4 0 0 15 298 0 0 936 1253 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Lit1virus;s__Pseudomonas virus LIT1;t__Pseudomonas phage LIT1 0 0 0 0 0 0 0 1450 1450 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Allosalinactinospora;s__Allosalinactinospora lopnorensis;t__ 0 0 2 1 10 0 0 117421 117434 k__Viruses;p__unclassified viruses;c__Chicken stool-associated circular virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Lactococcus phage asccphi28;t__ 0 0 0 0 0 0 0 375 375 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pelagibacter phage HTVC011P;t__ 0 0 0 0 0 0 0 798 798 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus thailandensis;t__Halococcus thailandensis JCM 13552 0 0 155 1 0 29 0 80478 80663 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Maculavirus;s__Bombyx mori Macula-like virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus G1;t__ 0 0 0 0 39 392 2313 30 2774 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Botrytis cinerea endornavirus 1;t__ 0 0 0 0 0 0 0 231 231 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 52A;t__ 0 0 0 0 12 248 0 573 833 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage phiNJ2;t__ 0 0 0 0 0 0 0 745 745 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Pequenovirus;s__Eel River basin pequenovirus;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P12002virus;s__Polaribacter virus P12002S;t__Polaribacter phage P12002S 0 0 0 0 0 0 0 996 996 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage Syn19;t__ 0 0 0 0 0 5 0 3499 3504 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-RIM8;t__Synechococcus phage S-RIM8 A.HR1 0 0 0 0 0 0 0 3424 3424 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Brochothrix phage BL3;t__ 0 0 0 0 0 2 0 828 830 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halostagnicola;s__Halostagnicola larsenii;t__Halostagnicola larsenii XH-48 0 0 2 0 13 0 0 55771 55786 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. UM_Kg1;t__ 0 0 3 2 0 138 0 89421 89564 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ampullaviridae;o__;f__;g__Ampullavirus;s__Acidianus bottle-shaped virus;t__ 0 0 0 0 0 0 0 476 476 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. S10(2016);t__ 4 0 4 0 0 1013 0 180646 181667 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ascoviridae;o__;f__;g__Toursvirus;s__Diadromus pulchellus ascovirus 4a;t__ 0 0 0 0 0 0 0 2386 2386 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__Singapore grouper iridovirus;t__ 0 0 0 0 0 0 0 2802 2802 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phi29virus;s__Bacillus virus GA1;t__ 0 0 0 0 0 0 0 422 422 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage Sf101;t__ 0 0 0 155 55 20 0 544 774 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan House Fly Virus 2;t__ 0 0 0 0 0 0 0 294 294 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Clostridium phage phi24R;t__ 0 0 0 0 0 0 0 378 378 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas abyssalis;t__Brevundimonas abyssalis TAR-001 0 0 4 0 0 16 0 59326 59346 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Xanthobacter;s__Xanthobacter sp. 126;t__ 0 2 4 22 24 0 0 109393 109445 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 73;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__SFTS phlebovirus;t__SFTS virus HB29 0 0 0 0 0 0 0 226 226 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Bovine viral diarrhea virus 1;t__ 0 0 0 0 0 0 0 251 251 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis japonica;t__ 0 0 32 0 15 131 0 179048 179226 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage phiJB;t__ 0 0 0 0 0 7 0 732 739 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanococcaceae;g__Methanothermococcus;s__Methanothermococcus okinawensis;t__Methanothermococcus okinawensis IH1 0 0 0 0 0 0 0 298 298 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Bacillus phage BalMu-1;t__ 0 0 0 0 0 0 0 797 797 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacter phage Enc34;t__ 0 0 0 0 0 0 0 1207 1207 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. WH 5701;t__ 23 0 1 33 50 32 0 60482 60621 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas sp. L-53-1-40;t__ 0 1 235 1 17 91 0 65837 66182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Puniceispirillum phage HMO-2011;t__ 0 0 0 0 0 0 0 1105 1105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pelagibacter phage HTVC019P;t__ 0 0 0 0 0 0 0 841 841 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Caulobacter phage Cr30;t__ 0 0 0 0 0 0 0 3119 3119 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage 19;t__ 0 0 0 0 9 0 0 1886 1895 k__Viruses;p__unclassified viruses;c__Cedratvirus A11;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 11441 11441 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium callitrichos;t__Bifidobacterium callitrichos DSM 23973 0 0 0 0 1 259 0 57423 57683 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Lv-1;t__ 0 0 0 0 0 0 0 778 778 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage phSE-2;t__ 0 0 0 0 90 215 0 678 983 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014c;t__ 0 0 0 2 0 0 0 3518 3520 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Capillovirus;s__Currant virus A;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Deep-sea thermophilic phage D6E;t__ 6 0 0 0 0 0 0 978 984 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Human alphaherpesvirus 3;t__ 0 0 0 0 0 0 0 2497 2497 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Js98virus;s__Escherichia virus Bp7;t__Enterobacteria phage Bp7 0 0 0 0 0 0 0 3361 3361 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Ea92virus;s__Erwinia virus Ea9-2;t__Erwinia phage Ea9-2 0 0 0 0 0 0 0 1511 1511 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus saccharolyticus;t__Halococcus saccharolyticus DSM 5350 0 0 32 0 0 0 0 68889 68921 k__Viruses;p__unclassified virophages;c__Yellowstone Lake virophage 6;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 496 496 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Mamestra configurata nucleopolyhedrovirus A;t__ 0 0 0 0 0 9 0 3092 3101 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Feline bocavirus 2;t__ 0 0 0 0 0 0 0 109 109 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces ipomoeae;t__Streptomyces ipomoeae 91-03 1 0 23 0 5 1112 0 205633 206774 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces aurantiacus;t__ 0 0 3 0 2 648 0 183231 183884 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. CH12i;t__ 0 0 2 3 31 260 0 66761 67057 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus caliditerrae;t__ 1 0 3 0 0 137 0 44215 44356 k__Bacteria;p__Actinobacteria;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter radiotolerans;t__ 0 0 0 0 0 0 0 57509 57509 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Archangiaceae;g__Hyalangium;s__Hyalangium minutum;t__ 1 0 0 23 77 0 0 223545 223646 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Celeribacter;s__Celeribacter indicus;t__ 0 0 0 0 0 0 0 6300 8798 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage SE1;t__ 0 0 0 0 1 600 0 237 838 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Isavirus;s__Infectious salmon anemia virus;t__ 0 0 0 0 0 0 0 241 241 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Eoghan;t__ 0 0 0 0 0 0 0 989 989 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Schizot4virus;s__Vibrio virus nt1;t__Vibrio phage nt-1 0 0 0 0 0 2 0 4948 4950 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter phenanthrenivorans;t__Pseudarthrobacter phenanthrenivorans Sphe3 1 0 9 24 113 0 0 84861 85008 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paenibacillus phage PG1;t__ 0 0 0 0 0 0 0 752 752 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter bizzozeronii;t__Helicobacter bizzozeronii CIII-1 0 0 0 0 0 0 0 1038 1041 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage PBC1;t__ 0 0 0 0 0 0 0 823 823 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage PhiS63;t__ 0 0 0 0 0 0 0 672 672 k__Bacteria;p__Chloroflexi;c__Thermomicrobia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__Thermomicrobium;s__Thermomicrobium roseum;t__Thermomicrobium roseum DSM 5159 0 0 0 0 0 0 0 40060 40060 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus phage LBR48;t__ 0 0 0 0 0 0 0 938 964 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;t__ 0 0 0 3 1 0 0 129119 129123 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 6;t__ 0 0 0 0 0 1 0 73 74 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phi7401PVL;t__ 5 0 0 0 497 35 0 408 945 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Thauera;s__Thauera humireducens;t__ 80 184 53 0 117 475 0 82526 83435 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Haemophilus phage Aaphi23;t__ 0 0 0 0 0 0 0 860 860 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Tl2011virus;s__Escherichia virus 191;t__Escherichia phage phi191 0 0 0 0 3 0 0 1173 1218 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora rectivirgula;t__Saccharopolyspora rectivirgula DSM 43747 2 0 107 0 16 10 0 79055 79190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Skunk mastadenovirus A;t__Skunk adenovirus PB1 0 0 0 0 0 0 0 636 636 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus;s__Meiothermus timidus;t__Meiothermus timidus DSM 17022 1 0 0 0 0 0 0 63734 63735 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Bivalve RNA virus G3;t__ 0 0 0 0 0 0 0 158 158 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Algiphilaceae;g__Algiphilus;s__Algiphilus aromaticivorans;t__Algiphilus aromaticivorans DG1253 0 2 57 0 0 0 0 76051 76110 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Jd18virus;s__Klebsiella virus JD18;t__Klebsiella phage JD18 0 0 0 0 240 0 0 3086 3326 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Kampy;t__ 0 0 0 0 158 583 0 286 1027 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia cyriacigeorgica;t__Nocardia cyriacigeorgica GUH-2 0 0 10 33 25 600 0 123224 123892 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kp15virus;s__Klebsiella virus KP27;t__Klebsiella phage KP27 0 0 0 0 10 1620 0 1858 3488 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea thiooxidans;t__ 0 0 2 4 4 0 0 109027 109037 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces purpeofuscus;t__ 1 0 82 0 114 560 0 185852 186609 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora sp. Root187;t__ 0 0 57 0 133 132 0 148455 148777 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 936 sensu lato;t__Lactococcus phage Q54 0 0 0 0 0 0 0 530 530 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Porphyrobacter;s__Porphyrobacter cryptus;t__Porphyrobacter cryptus DSM 12079 0 0 1 50 21 1 0 58878 58951 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN03;t__ 0 0 0 0 0 242 0 293 535 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Oceanospirillales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp. PBN3;t__ 0 28 26 6 4 76 0 72803 72943 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis halotolerans;t__Nocardiopsis halotolerans DSM 44410 0 0 2 0 0 75 0 124203 124280 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Cryocola;s__Cryocola sp. 340MFSha3.1;t__ 0 0 3 2 73 0 0 81725 81803 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium mucogenicum;t__ 0 0 4 7 0 458 0 123722 124191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes missouriensis;t__Actinoplanes missouriensis 431 0 0 29 0 54 0 0 175386 175469 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. AS58;t__ 0 0 9 0 0 1133 0 209601 210743 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia otitidiscaviarum;t__Nocardia otitidiscaviarum NBRC 14405 70 0 9 11 9 100 0 148919 149118 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Aquincola;s__Aquincola tertiaricarbonis;t__ 0 1 0 10 17 0 0 126179 126207 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf17;t__ 0 0 1 1 4 85 0 63971 64062 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium halotolerans;t__ 10 0 6 5 0 182 1 62801 63005 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Shigella phage Sf6;t__ 0 0 0 54 0 56 0 670 780 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Tibrovirus;s__Coastal Plains tibrovirus;t__Coastal Plains virus 0 0 0 0 0 0 0 264 264 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Acidipropionibacterium;s__Acidipropionibacterium thoenii;t__Acidipropionibacterium thoenii DSM 20276 0 0 134 0 31 1602 0 56897 58664 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium jeddahense;t__ 24 0 164 4 0 194 0 48598 48984 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Afipia;s__Afipia broomeae;t__Afipia broomeae ATCC 49717 0 0 0 364 53 1458 0 103315 105190 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Fulvimarina;s__Fulvimarina pelagi;t__Fulvimarina pelagi HTCC2506 0 0 9 15 4 0 0 75991 76019 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium halotolerans;t__Corynebacterium halotolerans YIM 70093 = DSM 44683 0 0 0 0 0 52 0 1597 1725 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf33;t__ 0 38 30 1 3 31 0 64185 64288 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Se1virus;s__Escherichia virus 4MG;t__Escherichia phage 4MG 0 0 0 0 0 4 0 2967 2971 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus Septima11;t__Escherichia phage KBNP1711 0 0 0 0 0 8 0 1515 1523 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces violens;t__ 0 0 15 0 5 427 0 158267 158714 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium testudinoris;t__ 0 0 4 10 0 117 0 54293 54424 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage VPUSM 8;t__ 0 0 0 0 633 0 0 49 682 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage LL-H;t__ 0 0 0 0 0 0 0 693 693 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium lipophiloflavum;t__Corynebacterium lipophiloflavum DSM 44291 13 0 9 0 0 138 0 45378 45539 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia desulfuricans;t__Gordonia desulfuricans NBRC 100010 0 0 1 21 0 40 0 108048 108113 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage P-RSM6;t__ 0 0 0 0 0 0 0 3849 3849 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halolamina;s__Halolamina rubra;t__ 3 0 1 3 8 0 0 58948 58965 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces cattleya;t__Streptomyces cattleya NRRL 8057 = DSM 46488 5 0 35 0 15 304 0 125300 125659 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria rhizophila;t__Kocuria rhizophila DC2201 0 0 10 18 1 25 0 53896 53950 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia sp. Iso899;t__ 0 0 20 0 0 1 0 101948 101969 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Altererythrobacter;s__Altererythrobacter marensis;t__ 0 0 0 2 21 9 0 57668 57700 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Haematobacter;s__Haematobacter massiliensis;t__ 0 0 17 0 34 0 0 82423 82474 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium xerosis;t__Corynebacterium xerosis NBRC 16721 0 0 3 6 0 11 0 53679 53699 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Starkeya;s__Starkeya novella;t__Starkeya novella DSM 506 0 0 0 48 9 0 0 95243 95300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Lc-Nu;t__Lactobacillus phage phiAT3 0 0 0 0 0 0 0 783 783 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia brasiliensis;t__Nocardia brasiliensis ATCC 700358 1 0 6 35 13 453 0 188218 188726 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Jd18virus;s__Klebsiella virus PKO111;t__Klebsiella phage PKO111 0 0 0 0 88 200 0 3087 3375 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Salmonella virus PsP3;t__ 0 0 0 0 0 0 0 612 612 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus pyridinivorans;t__Rhodococcus pyridinivorans SB3094 0 0 12 44 51 111 0 104323 104541 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium tropici;t__Rhizobium tropici CIAT 899 0 0 0 0 0 0 0 53046 56981 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium accolens;t__Corynebacterium accolens ATCC 49725 2 0 6 0 0 49 0 48093 48150 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Enorma;s__Enorma timonensis;t__ 44 0 0 0 5 13 0 46348 46410 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Ralstonia phage RSY1;t__ 0 0 0 0 0 41 0 759 800 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces seoulensis;t__ 0 1 7 0 4 720 0 126790 127522 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis;s__Asticcacaulis excentricus;t__Asticcacaulis excentricus CB 48 0 0 0 0 0 0 0 8036 8090 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0131-1;o__;f__;g__;s__;t__ 7 239 0 0 0 0 0 612 858 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage JS;t__Escherichia phage JS98 0 0 0 0 1011 26 0 2373 3410 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-SM1;t__ 0 0 0 0 0 0 0 3481 3481 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-SM2;t__ 0 0 0 0 0 0 0 3815 3815 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermofilaceae;g__Thermofilum;s__Thermofilum pendens;t__Thermofilum pendens Hrk 5 0 0 0 0 0 0 0 35637 35637 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Citrobacter phage Miller;t__ 0 0 0 0 0 1372 0 2191 3563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage UFV-AREG1;t__ 0 0 0 0 1362 169 0 1884 3415 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia virus C40;t__Escherichia phage vB_EcoM_ACG-C40 0 0 0 0 46 1177 0 2124 3347 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Yersinia virus PST;t__Yersinia phage PST 0 0 0 0 70 1345 0 1940 3355 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Tg1virus;s__Yersinia virus R1RT;t__Yersinia phage phiR1-RT 0 0 0 0 0 0 0 3376 3376 k__Viruses;p__dsDNA viruses, no RNA stage;c__Bicaudaviridae;o__;f__;g__;s__Acidianus tailed spindle virus;t__ 0 0 0 0 0 0 0 1416 1416 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Crocodylidpoxvirus;s__Nile crocodilepox virus;t__ 0 0 0 0 0 0 0 3801 3801 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces timonensis;t__Actinomyces timonensis DSM 23838 1 0 8 0 0 30 0 58152 58191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium stationis;t__ 0 0 8 6 0 71 0 56090 56175 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium virus Toto;t__Mycobacterium phage Toto 0 0 0 0 80 1140 0 298 1518 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Canine mastadenovirus A;t__ 0 0 0 0 0 0 3 607 610 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Canine mastadenovirus A;t__Canine adenovirus 1 0 0 0 0 0 0 610 0 610 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus pumilus;t__ 0 0 0 0 0 0 0 1824 1824 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage SA12;t__ 3 0 0 0 447 143 0 265 858 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Ramsey;t__ 0 0 0 5 228 331 0 607 1171 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Glycomycetales;f__Glycomycetaceae;g__Glycomyces;s__Glycomyces tenuis;t__Glycomyces tenuis DSM 44171 1 0 5 0 0 246 0 114288 114540 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes sp. N902-109;t__ 0 0 18 0 38 55 0 184450 184561 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Salmonella phage FSL SP-058;t__ 0 0 0 0 0 0 0 1447 1447 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium glyciniphilum;t__Corynebacterium glyciniphilum AJ 3170 0 0 6 16 0 128 0 70045 70195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P335 sensu lato;t__ 0 0 0 0 0 90 0 641 731 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Wphvirus;s__Bacillus virus Megatron;t__Bacillus phage Megatron 0 0 0 0 488 0 0 2686 3174 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Turkey aviadenovirus C;t__Turkey aviadenovirus 4 0 0 0 0 0 0 0 858 858 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 7;t__ 0 0 0 0 0 0 0 74 74 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp. URHA0019;t__ 0 0 1 1 24 2 0 64423 64451 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium gordonae;t__ 0 0 1 0 0 1270 0 149057 150328 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia hirsuta;t__Gordonia hirsuta DSM 44140 = NBRC 16056 0 0 0 16 0 18 0 69614 69648 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Porcine astrovirus 5;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Fusarium oxysporum f. sp. dianthi mycovirus 1;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobravirus;s__Pea early-browning virus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage phiARI0468-4;t__ 392 0 0 0 0 0 0 355 747 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Catelliglobosispora;s__Catelliglobosispora koreensis;t__Catelliglobosispora koreensis DSM 44566 0 0 7 0 8 0 0 153639 153654 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Haloarcula;s__Haloarcula hispanica;t__Haloarcula hispanica ATCC 33960 0 0 0 0 0 0 0 8116 8116 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cotton leaf curl virus betasatellite;t__ 0 0 0 0 0 1 0 27 28 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Aphis glycines) 0 0 0 0 0 0 0 211 211 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia cepacia;t__Burkholderia cepacia ATCC 25416 0 0 0 0 0 0 0 4174 4196 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus xylosus;t__ 0 0 0 0 0 0 0 582 601 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Spn3virus;s__Salmonella virus SPN3US;t__Salmonella phage SPN3US 0 0 0 0 0 0 0 4808 4808 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Silviavirus;s__Staphylococcus virus SA11;t__ 0 0 0 0 0 0 0 2726 2726 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein Taiwan virus;t__ 0 0 0 0 0 2 0 52 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__V5virus;s__Escherichia virus V5;t__Escherichia phage V5 0 0 0 0 0 0 0 2758 2758 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Tioman rubulavirus;t__Tioman virus 0 0 0 0 0 0 0 310 310 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Schizot4virus;s__Vibrio virus KVP40;t__Vibrio phage KVP40 0 0 0 0 0 0 0 4896 4896 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Pusa virus;t__ 0 0 0 0 0 3 0 51 54 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium variabile;t__Corynebacterium variabile DSM 44702 4 0 296 19 0 608 0 67733 68660 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Yunnan virus;t__ 0 0 0 0 0 0 0 54 54 k__Bacteria;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus amyloliquefaciens;t__ 0 0 2 0 0 78 0 43128 43208 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 2;t__ 0 0 0 0 0 0 0 99 99 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Microvirga;s__Microvirga massiliensis;t__ 0 0 0 1 0 0 0 177160 177161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterococcus phage vB_EfaP_IME195;t__ 0 0 0 0 0 0 0 372 372 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Altererythrobacter;s__Altererythrobacter atlanticus;t__ 0 0 13 102 1030 0 0 66580 67725 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Acinetobacter phage Ac42;t__ 0 0 0 0 0 0 0 3354 3354 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 25;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Myodes glareolus polyomavirus 1;t__Bank vole polyomavirus 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Camelpox virus;t__ 0 0 0 0 0 0 0 4114 4114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Klebsiella phage vB_KpnM_KB57;t__ 0 0 0 0 0 0 0 2859 2859 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Reptarenavirus;s__Alethinophid 2 reptarenavirus;t__ROUT virus 0 0 0 0 0 0 4 199 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Lambdapapillomavirus 3;t__Canis familiaris papillomavirus 6 0 0 0 0 0 0 0 164 164 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak VN virus;t__ 0 0 0 0 0 0 0 156 156 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium simiae;t__ 0 0 1 0 0 5 0 118763 118769 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium roseum;t__Streptosporangium roseum DSM 43021 1 1 69 10 24 241 0 206480 206826 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 3;t__ 0 0 0 0 0 0 0 217 217 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XVII. Incertae Sedis;g__Thermaerobacter;s__Thermaerobacter marianensis;t__Thermaerobacter marianensis DSM 12885 0 0 0 0 0 0 0 56893 56893 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Squirrel monkey retrovirus;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Shayang Fly Virus 3;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 11;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage Lu11;t__ 0 0 0 0 0 0 0 5610 5610 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella grahamii;t__Bartonella grahamii as4aup 0 0 0 0 0 0 0 530 563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas phage phiAS5;t__ 0 0 0 0 0 0 0 4505 4505 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Root190;t__ 0 0 10 0 19 50 0 100164 100243 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinokineospora;s__Actinokineospora inagensis;t__Actinokineospora inagensis DSM 44258 0 0 9 0 7 13 0 145285 145314 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas bacteroides;t__Brevundimonas bacteroides DSM 4726 0 0 0 0 2 46 0 64332 64380 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. LaPpAH-95;t__ 0 0 7 0 5 524 0 150678 151214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cr3virus;s__Pectobacterium virus phiTE;t__Pectobacterium phage phiTE 0 0 0 0 0 43 0 2803 2846 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Serratia phage PS2;t__ 0 0 0 0 0 0 0 3345 3345 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Acinetobacter phage Acj9;t__ 0 0 0 0 0 0 0 3398 3398 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter sp. SG61-1L;t__ 0 0 1 19 0 0 0 75408 75428 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Devosia;s__Devosia sp. H5989;t__ 0 0 0 1 0 0 0 91883 91884 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Human alphaherpesvirus 2;t__ 0 0 0 0 0 0 0 3093 3093 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus ASCC191;t__ 0 0 0 0 29 28 0 591 648 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Aureimonas;s__Aureimonas sp. Leaf324;t__ 0 0 0 17 60 10 0 88163 88250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage vB_SosS_Oslo;t__ 0 0 0 49 19 42 0 872 982 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas sp. Root1279;t__ 0 1 2 0 3 53 0 68437 68496 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter nectariphilus;t__Gemmobacter nectariphilus DSM 15620 0 0 2 0 196 0 0 90114 90312 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 10;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phiNM3;t__ 0 0 0 0 12 48 0 821 881 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Escherichia phage Envy;t__ 0 0 0 0 0 0 0 904 904 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Tl2011virus;s__Shigella virus VASD;t__Shigella phage Ss-VASD 2 0 0 5 761 37 0 452 1257 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Rubrivivax;s__Rubrivivax gelatinosus;t__Rubrivivax gelatinosus IL144 0 1 0 17 62 0 0 100785 100865 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__;g__Tomitella;s__Tomitella biformata;t__Tomitella biformata AHU 1821 0 0 5 23 0 0 0 93952 93980 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Bovine alphaherpesvirus 5;t__ 0 0 0 0 0 130 0 2626 2756 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Feline immunodeficiency virus;t__ 0 0 0 0 0 0 0 189 189 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium medicae;t__Sinorhizobium medicae WSM419 0 0 0 0 0 36 0 60368 60709 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora sp. CNQ490;t__ 0 0 3 0 8 61 0 98714 98786 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Jingmen tick virus;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage K13;o__;f__;g__;s__;t__ 30 445 0 0 0 0 0 312 787 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Pseudomonas phage phiCTX;t__ 0 0 0 0 0 0 0 711 711 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P12024virus;s__Nonlabens virus P12024S;t__Nonlabens phage P12024S 0 0 0 0 0 352 0 361 713 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas virus 31;t__ 0 0 0 0 0 0 0 3459 3459 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sp18virus;s__Escherichia virus VR7;t__Escherichia phage vB_EcoM_VR7 0 0 0 0 3 125 0 3257 3385 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium chubuense;t__Mycobacterium chubuense NBB4 0 0 5 3 0 171 0 111495 111674 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 37;t__ 0 0 0 0 0 0 0 873 873 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Vibrio phage JA-1;t__ 0 0 0 0 0 0 0 1385 1385 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Betacoronavirus HKU24;t__ 0 0 0 0 0 0 0 624 624 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia aquimarina;t__ 0 0 0 0 0 0 0 81825 81825 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sandarakinorhabdus;s__Sandarakinorhabdus sp. AAP62;t__ 0 0 10 0 6 0 0 62575 62591 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium thermoresistibile;t__Mycobacterium thermoresistibile ATCC 19527 0 0 2 6 0 24 0 97277 97309 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 55;t__ 0 0 0 0 15 373 0 450 838 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora carbonacea;t__ 0 0 5 0 0 0 0 152529 152534 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium mastitidis;t__Corynebacterium mastitidis DSM 44356 0 0 0 0 0 2 0 47321 47323 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__Gordonibacter;s__Gordonibacter pamelaeae;t__Gordonibacter pamelaeae 7-10-1-b 0 1 65 0 346 0 0 64884 65296 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Xipapillomavirus;s__Xipapillomavirus 1;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage T4 sensu lato;t__Enterobacteria phage T4 0 0 0 0 88 1460 0 1830 3378 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia virus ECML134;t__Escherichia phage ECML-134 0 0 0 0 104 1641 0 1590 3335 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhizobium phage RR1-A;t__ 0 0 0 0 0 0 0 1062 1062 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage BP-4795;t__ 92 0 0 262 0 133 0 671 1158 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Croceibacter phage P2559S;t__ 0 0 0 0 0 0 0 899 899 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Sinomonas;s__Sinomonas humi;t__ 0 0 1 5 0 0 0 88026 88032 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium resinovorum;t__ 0 0 0 12 11 2 0 75541 75566 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Cercopithecine betaherpesvirus 5;t__Papio ursinus cytomegalovirus 0 0 0 0 0 0 0 4521 4521 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseus;t__Streptomyces griseus subsp. griseus 5 0 25 0 0 691 0 170197 170918 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseoruber;t__ 1 0 33 0 13 1043 0 194190 195280 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis chromatogenes;t__Nocardiopsis chromatogenes YIM 90109 0 0 3 2 3 584 0 136726 137318 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium casei;t__Brevibacterium casei S18 29 0 185 18 0 27 0 72956 73215 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Leaf357;t__ 0 1 0 3 1 36 0 77376 77417 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Citromicrobium;s__Citromicrobium bathyomarinum;t__Citromicrobium bathyomarinum JL354 3 0 0 101 12 78 0 65145 65339 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Blackberry chlorotic ringspot virus;t__ 0 0 0 0 0 0 0 169 169 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Sporichthyaceae;g__Sporichthya;s__Sporichthya polymorpha;t__Sporichthya polymorpha DSM 43042 2 0 47 1 0 0 0 109835 109885 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Lactoccocus phage WP-2;t__ 0 0 0 0 0 0 0 377 377 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLNTR2;t__ 0 0 0 0 0 24 0 542 566 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN34;t__ 0 0 0 0 0 311 0 249 560 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-WAM2;t__ 0 0 0 0 0 7 0 3720 3727 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium obuense;t__ 0 0 0 3 0 71 0 114031 114105 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Shuni orthobunyavirus;t__Aino virus 0 0 0 0 0 0 0 239 239 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Colwellia phage 9A;t__ 0 0 0 0 0 0 0 2098 2098 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea sp. NBRC 110462;t__ 0 0 12 6 32 62 0 179611 179723 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phi8074-B1;t__ 0 0 0 0 0 0 0 951 951 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phiRS7;t__ 0 0 0 0 0 0 0 867 867 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage EFRM31;t__ 0 0 0 0 0 11 0 327 338 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia tenerifensis;t__Nocardia tenerifensis NBRC 101015 0 0 4 10 7 107 0 193337 193465 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Enterobacteria phage ST104;t__ 0 0 0 7 1 480 0 339 827 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Porphyrobacter;s__Porphyrobacter sp. HL-46;t__ 0 0 1 15 23 4 0 63453 63496 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Pseudoalteromonadaceae;g__Pseudoalteromonas;s__Pseudoalteromonas rubra;t__ 0 0 0 0 0 0 0 1397 1397 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Cupixi mammarenavirus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Ligustrum virus A;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Enterobacter phage EcP1;t__ 0 0 0 0 0 0 0 1181 1181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Anticarsia gemmatalis nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2644 2644 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi21dt1virus;s__Streptococcus phage Abc2;t__ 0 0 0 0 21 213 0 463 697 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage Ipla5;t__ 0 0 0 0 0 215 0 656 871 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Leishmaniavirus;s__Leishmania RNA virus 1;t__Leishmania RNA virus 1 - 4 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Indiana vesiculovirus;t__Vesicular stomatitis Indiana virus 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salinivibrio phage CW02;t__ 0 0 0 0 0 0 0 987 987 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clostridium phage phiCTP1;t__ 0 0 0 0 0 0 0 1183 1183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage PVA1;t__ 0 0 0 0 0 0 0 830 830 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. Root265;t__ 11 0 0 3 0 86 0 133259 133359 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Shallot latent virus;t__Garlic latent virus 0 0 0 0 0 0 0 167 167 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus Kp2;t__Klebsiella phage Kp2 0 0 0 0 0 133 0 746 879 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Salmonella virus SPC35;t__ 0 0 0 0 0 87 0 2280 2367 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mottle virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Cyanophage KBS-S-2A;t__ 0 0 0 0 0 0 0 813 813 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Actinomadura;s__Actinomadura oligospora;t__Actinomadura oligospora ATCC 43269 0 0 1 0 0 0 0 186948 186949 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bastillevirus;s__Bacillus virus Bastille;t__Bacillus phage Bastille 0 0 0 0 0 0 0 3079 3079 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan heteroptera virus 3;t__ 0 0 0 0 0 0 0 575 575 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage NotTheCreek;t__Bacillus phage Kida 0 0 0 0 328 772 749 1394 3243 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage SpSL1;t__ 0 0 0 0 0 1 0 674 675 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Salmonella phage FSL SP-076;t__ 0 0 0 0 0 285 0 1156 1441 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Betafusellovirus;s__Sulfolobus spindle-shaped virus 6;t__ 0 0 0 0 1 0 0 312 313 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosarcinaceae;g__Methanosarcina;s__Methanosarcina vacuolata;t__Methanosarcina vacuolata Z-761 0 0 0 0 0 0 0 1161 1162 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Caldivirga;s__Caldivirga maquilingensis;t__Caldivirga maquilingensis IC-167 0 0 0 0 0 0 0 41551 41551 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria sp. ZOR0020;t__ 84 0 3 115 1 209 0 58922 59381 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Nonagvirus;s__Escherichia virus JenP2;t__Enterobacteria phage JenP2 0 0 0 0 0 133 0 1063 1196 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio gigas;t__Desulfovibrio gigas DSM 1382 = ATCC 19364 0 0 0 0 0 0 0 1956 1956 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albidoflavus;t__ 84 0 35 0 4 402 0 140952 141477 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella sp. phage 1/44;t__ 0 0 0 0 0 0 0 992 992 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Nonagvirus;s__Escherichia virus JenP1;t__Enterobacteria phage JenP1 0 0 0 0 0 0 0 1215 1215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Nonagvirus;s__Escherichia virus JenK1;t__Enterobacteria phage JenK1 0 0 0 0 0 63 0 1151 1214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 53;t__ 0 0 0 0 14 362 0 501 877 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sp. Root241;t__ 0 0 1 2 4 52 0 84169 84228 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas flavigena;t__ 0 0 26 5 0 1 0 46881 46913 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage PM1;t__ 0 0 0 0 0 0 0 1017 1017 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage S-RSM4;t__ 0 0 0 0 0 0 0 3889 3889 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium aurimucosum;t__ 62 0 72 9 0 275 25 46580 47023 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces pluripotens;t__ 1 0 14 0 1 1016 0 145889 146921 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp8virus;s__Campylobacter virus CPX;t__ 0 0 0 0 0 0 0 2653 2653 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Escherichia virus JL1;t__ 0 0 0 0 1 0 0 868 869 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Dinoroseobacter;s__Dinoroseobacter shibae;t__Dinoroseobacter shibae DFL 12 = DSM 16493 0 0 0 0 3 0 0 10200 12558 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus sp. Leaf247;t__ 0 0 12 14 27 34 0 90573 90663 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Allofrancisella;s__Allofrancisella guangzhouensis;t__ 0 0 0 0 0 0 0 60 60 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Ignicoccus;s__Ignicoccus hospitalis;t__Ignicoccus hospitalis KIN4/I 0 0 0 0 0 0 0 25950 25950 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Niminivirus;t__ 0 0 0 0 0 0 0 47 47 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora saliphila;t__Saccharomonospora saliphila YIM 90502 0 0 8 0 17 61 0 78186 78272 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Mulberry vein banding virus;t__ 0 0 0 0 0 0 0 333 333 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage YMC13/03/R2096;t__ 0 0 0 0 0 0 0 1963 1963 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Cronobacter;s__Cronobacter sakazakii;t__ 0 0 0 0 64 0 0 2611 3042 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Candidatus Synechococcus spongiarum;t__Candidatus Synechococcus spongiarum SH4 0 0 1 1 0 5 0 32651 32658 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Vibrionales;f__Vibrionaceae;g__Candidatus Photodesmus;s__Candidatus Photodesmus blepharus;t__ 0 0 0 0 0 0 0 616 616 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage ul36;t__ 0 0 0 0 0 88 0 647 735 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium kyorinense;t__ 0 0 1 1 0 33 0 105176 105211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Sheep polyomavirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus G;t__Rotavirus G chicken/03V0567/DEU/2003 0 0 0 0 0 0 0 345 345 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus sediminicola;t__ 0 0 0 1 0 0 0 75235 75236 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Novirhabdovirus;s__Infectious hematopoietic necrosis virus;t__ 0 0 0 0 0 0 0 222 222 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia pneumoniae;t__Nocardia pneumoniae NBRC 100136 3 0 12 12 14 371 0 151067 151479 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. UNCCL10;t__ 0 0 1 0 8 73 0 62104 62186 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus watsonii;t__Nitrosococcus watsonii C-113 0 0 0 0 0 0 0 891 892 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinosynnema;s__Actinosynnema mirum;t__Actinosynnema mirum DSM 43827 0 0 45 0 168 0 0 164749 164962 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage DirtyBetty;t__Bacillus phage Eyuki 0 0 0 0 980 810 908 547 3245 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage FSLSP030;t__ 0 0 0 0 0 73 0 1121 1194 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Thermoproteales;f__Thermoproteaceae;g__Vulcanisaeta;s__Vulcanisaeta distributa;t__Vulcanisaeta distributa DSM 14429 0 0 0 0 0 0 0 47482 47482 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Cytomegalovirus;s__Aotine betaherpesvirus 1;t__ 0 0 0 0 0 0 0 4389 4389 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage pYD38-A;t__ 0 0 0 0 0 0 0 951 951 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sunflower chlorotic mottle virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Macrobrachium rosenbergii Taihu virus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp8virus;s__Campylobacter phage PC14;t__ 0 0 0 0 0 2673 0 25 2698 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Maprik virus;t__ 0 0 0 0 0 0 0 237 237 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora erythraea;t__Saccharopolyspora erythraea NRRL 2338 0 0 22 0 18 48 0 164168 164256 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__uncultured phage WW-nAnB;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__unclassified bacterial viruses;c__Synechococcus phage S-CAM9;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 3496 3496 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Pigeon adenovirus 2;t__ 0 0 0 0 0 0 0 839 839 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Lymphocryptovirus;s__Callitrichine gammaherpesvirus 3;t__ 0 0 0 0 0 0 0 2993 2993 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Suspvirus;s__Escherichia virus SUSP1;t__Escherichia phage SUSP1 0 0 0 0 10 0 0 1804 1814 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium pilosum;t__Corynebacterium pilosum DSM 20521 0 0 0 0 0 24 0 50514 50538 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-CAM1;t__ 0 0 0 0 0 0 0 3960 3960 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sitaravirus;s__Paenibacillus virus Hb10c2;t__Paenibacillus phage HB10c2 0 0 0 270 105 240 0 97 712 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 12;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage APCEc01;t__ 0 0 0 0 926 0 0 2449 3375 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium aurum;t__ 111 0 0 1 0 89 0 120091 120292 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Delisea pulchra RNA virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Orthopoxvirus;s__Ectromelia virus;t__ 0 0 0 0 0 474 0 3721 4195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhizobium phage vB_RleM_P10VF;t__ 0 0 0 0 0 0 0 3128 3128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Equid alphaherpesvirus 3;t__ 0 0 0 0 3 0 0 3029 3032 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium aurimucosum;t__Corynebacterium aurimucosum ATCC 700975 0 0 0 0 0 0 0 536 580 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cronobacter phage CR5;t__ 0 0 0 0 0 0 0 4479 4479 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Una961virus;s__Helicobacter virus KHP30;t__Helicobacter phage KHP30 0 0 0 0 0 2 0 522 524 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Zucchini lethal chlorosis orthotospovirus;t__Zucchini lethal chlorosis virus 0 0 0 0 0 0 0 341 341 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Aveparvovirus;s__Galliform aveparvovirus 1;t__Chicken parvovirus ABU-P1 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__B4virus;s__Bacillus virus Spock;t__Bacillus phage Spock 0 0 0 0 48 7 0 3230 3285 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage vB_EfaS_IME198;t__ 0 0 0 0 118 0 0 1041 1159 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Prochlorococcus phage Syn33;t__ 0 0 0 4 0 3 0 3478 3485 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Gammatorquevirus;s__Torque teno midi virus 2;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Patna betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Oenococcus phage phiS13;t__ 0 0 0 0 0 0 0 869 869 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malachra yellow vein mosaic virus-associated satellite DNA beta;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Penaeus monodon nudivirus;t__ 0 0 0 0 0 0 0 2392 2392 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Acinetobacter phage ZZ1;t__ 0 0 0 0 0 0 0 3333 3333 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Hemipteran ambidensovirus 3;t__Myzus persicae densovirus 0 0 0 0 0 0 0 109 109 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Haloterrigena;s__Haloterrigena limicola;t__Haloterrigena limicola JCM 13563 0 0 1 0 117 0 0 70134 70252 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 98201;t__ 0 0 0 0 0 303 0 421 724 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium sp. CP1;t__ 0 0 0 0 0 0 0 175 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_Huxley;t__ 0 0 0 0 0 0 0 4815 4815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 10;t__Human papillomavirus type 121 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Bymovirus;s__Wheat yellow mosaic virus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StauST398-4;t__ 1 0 0 0 64 607 0 186 858 k__Viruses;p__dsDNA viruses, no RNA stage;c__Turriviridae;o__;f__;g__Alphaturrivirus;s__Sulfolobus turreted icosahedral virus 1;t__ 0 0 0 0 0 0 0 353 353 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__V5virus;s__Escherichia virus FFH2;t__Escherichia phage FFH2 0 0 0 0 0 760 0 2020 2780 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage P793;t__ 0 0 0 0 0 41 0 494 535 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__;f__Leptospiraceae;g__Leptospira;s__Leptospira biflexa;t__Leptospira biflexa serovar Patoc 0 0 0 0 0 0 0 1463 1482 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Yersinia virus D1;t__Yersinia phage phiD1 0 0 0 0 8 1027 0 2287 3322 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Alteromonadales;f__Moritellaceae;g__Moritella;s__Moritella viscosa;t__ 0 0 0 0 0 0 0 156 156 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. L77;t__ 5 0 1 5 31 9 0 72089 72140 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Stygiolobus rod-shaped virus;t__ 0 0 0 0 0 0 0 561 561 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nimaviridae;o__;f__;g__Whispovirus;s__White spot syndrome virus;t__ 0 0 0 0 0 0 0 6185 6185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage phi92;t__ 0 0 0 0 0 3 0 2969 2972 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Escherichia phage slur01;t__ 0 0 0 0 0 0 0 1224 1224 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 35;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Epsilon15virus;s__Salmonella virus SPN1S;t__Salmonella phage SPN1S 0 0 0 0 0 43 0 730 773 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia sp. Leaf336;t__ 0 0 1 1 81 17 0 83048 83148 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Begomovirus-associated DNA-III;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Persimmon virus A;t__ 0 0 0 0 0 0 0 269 269 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium elephantis;t__ 0 0 0 2 0 12 0 103295 103309 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage ACG-2014d;t__ 0 0 0 1 3 5 0 3573 3582 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Phytoreovirus;s__Rice gall dwarf virus;t__ 0 0 0 0 0 0 0 492 492 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Spodoptera exigua multiple nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2712 2712 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Br18;t__ 2 0 3 4 24 164 0 69700 69897 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Bosea;s__Bosea sp. 117;t__ 0 0 1 18 1 0 0 92642 92662 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage SfI;t__ 2 0 0 145 0 190 0 430 767 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Daphne virus S;t__ 0 0 0 0 0 0 0 174 174 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia sp. Root227;t__ 7 0 13 1 46 22 0 81245 81334 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium psychraerophilum;t__ 49 0 1 0 1 70 0 52161 52282 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces oris;t__ 2 0 11 0 5 334 0 60506 60858 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Psavirus;s__Listeria virus LP302;t__Listeria phage LP-030-2 0 0 0 0 300 0 0 465 765 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus jannaschii;t__Methanocaldococcus jannaschii DSM 2661 0 0 0 0 0 0 0 1496 1497 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 15;t__ 0 0 0 0 0 0 0 191 191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium aurimucosum;t__Corynebacterium aurimucosum ATCC 700975 0 0 7 6 0 233 0 55557 55803 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage vB_PsyM_KIL1;t__ 0 0 0 0 0 0 0 1811 1811 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Granulicoccus;s__Granulicoccus phenolivorans;t__Granulicoccus phenolivorans DSM 17626 0 0 963 3 4 0 0 81125 82095 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus mucosae;t__Lactobacillus mucosae LM1 0 0 0 0 0 0 0 2166 2166 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera methylohalidivorans;t__Leisingera methylohalidivorans DSM 14336 0 0 0 0 0 0 0 10078 10120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sitaravirus;s__Paenibacillus virus Diva;t__Paenibacillus phage Diva 0 0 0 297 370 53 0 24 744 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Paenibacillus phage phiIBB_Pl23;t__ 0 0 0 0 0 0 0 825 825 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Lc-Nu;t__ 0 0 0 0 0 2 8 719 729 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Wanda;t__ 0 0 0 0 241 573 0 1385 2199 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei zhaovirus-like virus 1;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Divavirus;s__Diuris virus A;t__ 0 0 0 0 0 0 0 139 139 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus erythropolis;t__Rhodococcus erythropolis CCM2595 0 0 0 0 0 0 0 1802 1804 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces johnsonii;t__Actinomyces johnsonii F0542 0 0 2 0 1 57 0 65763 65823 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Brevibacillus;s__Brevibacillus laterosporus;t__Brevibacillus laterosporus LMG 15441 0 0 0 0 0 0 0 766 791 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Dietziaceae;g__Dietzia;s__Dietzia maris;t__ 0 0 29 78 0 30 0 69869 70006 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronorubrum;s__Natronorubrum tibetense;t__Natronorubrum tibetense GA33 0 0 1 0 42 26 0 98602 98671 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 19 LDMD-2013;t__ 0 0 0 0 0 0 0 21 21 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 5;t__Human papillomavirus type 88 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Bean yellow mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Papaya leaf distortion mosaic virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Turnip mosaic virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage P-SSM3;t__ 0 0 0 0 334 0 0 3247 3581 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi11virus;s__Streptococcus phage O1205;t__ 0 0 0 0 86 5 0 770 861 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Cucurbit yellow stunting disorder virus;t__ 0 0 0 0 0 0 0 340 340 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia rhipicephali;t__Rickettsia rhipicephali str. 3-7-female6-CWPP 0 0 0 0 0 0 0 292 301 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sinense;t__ 0 0 1 11 0 99 0 92762 92873 k__Viruses;p__unclassified bacterial viruses;c__Salmonella phage 118970_sal3;o__;f__;g__;s__;t__ 544 0 0 0 0 0 0 1003 1547 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Nitrosococcus;s__Nitrosococcus halophilus;t__Nitrosococcus halophilus Nc 4 0 0 0 0 0 0 0 1316 1316 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinobaculum;s__Actinobaculum sp. oral taxon 183;t__Actinobaculum sp. oral taxon 183 str. F0552 0 0 2 0 6 0 0 46918 46926 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Js98virus;s__Escherichia virus JS10;t__Enterobacteria phage JS10 0 0 0 0 1 0 0 3428 3429 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Parapoxvirus;s__Pseudocowpox virus;t__ 0 0 0 0 0 84 0 2821 2905 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis baichengensis;t__Nocardiopsis baichengensis YIM 90130 0 0 3 0 2 35 0 127906 127946 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Cba41virus;s__Cellulophaga virus Cba172;t__Cellulophaga phage phi17:2 0 0 0 0 1 1893 0 1012 2906 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 7;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage 42E;t__ 2 0 0 0 168 416 0 331 917 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-33;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus AYO145A;t__Escherichia phage vB_EcoM_AYO145A 0 0 0 0 0 319 0 1428 1747 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia sp. CN3;t__ 1 0 14 1 0 80 0 198999 199095 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 16;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 13;t__ 0 0 0 0 0 0 0 352 352 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Nitrosomonadales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp. AL212;t__ 0 0 0 0 0 0 0 3043 3128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Acinetobacter virus 133;t__ 0 0 0 0 0 0 0 3196 3196 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium efficiens;t__Corynebacterium efficiens YS-314 0 0 0 0 0 14 0 1285 1445 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Autographa californica multiple nucleopolyhedrovirus;t__Autographa californica nucleopolyhedrovirus 0 0 0 0 0 52 0 2625 2677 k__Viruses;p__dsDNA viruses, no RNA stage;c__Nudiviridae;o__;f__;g__;s__Heliothis zea nudivirus;t__Helicoverpa zea nudivirus 2 0 0 0 0 0 0 0 4632 4632 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum coriense;t__Halorubrum coriense DSM 10284 0 0 23 0 4 75 0 72675 72777 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacterial phage mEp213;t__ 0 0 0 24 0 693 0 165 882 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas;s__Brevundimonas aveniformis;t__Brevundimonas aveniformis DSM 17977 0 0 3 0 7 3 0 51527 51540 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Furovirus;s__Oat golden stripe virus;t__ 0 0 0 0 0 0 0 205 205 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus crustorum;t__ 0 0 0 0 0 39 0 747 1098 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phifelvirus;s__Enterococcus virus FL1;t__Enterococcus phage phiFL1A 0 0 0 0 13 162 0 600 775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage slur08;t__Escherichia phage slur14 0 0 0 0 127 1694 0 1528 3349 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage Av-05;t__ 0 0 0 0 17 17 0 2384 2418 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobus monocaudavirus SMV3;t__ 0 0 0 0 0 2 0 1202 1205 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Berrimah ephemerovirus;t__Berrimah virus 0 0 0 0 0 0 0 300 300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacteriophage APSE-2;t__ 0 0 0 0 0 251 0 546 797 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhizobium phage vB_RglS_P106B;t__ 0 0 0 0 0 0 0 1120 1120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Equine mastadenovirus B;t__Equine adenovirus 2 0 0 0 0 0 0 0 661 661 k__BacteriaPlasmid;p__Tenericutes;c__Mollicutes;o__Entomoplasmatales;f__Spiroplasmataceae;g__Spiroplasma;s__Spiroplasma taiwanense;t__Spiroplasma taiwanense CT-1 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Equine mastadenovirus A;t__Equine adenovirus 1 0 0 0 0 0 0 0 653 653 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Epizootic hemorrhagic disease virus;t__Epizootic hemorrhagic disease virus 1 0 0 0 0 0 0 0 370 370 k__Viruses;p__unclassified viruses;c__San Bernardo virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 194 194 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia xyli;t__Leifsonia xyli subsp. cynodontis 0 0 1 1 35 6 0 53685 53728 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Bole Tick Virus 2;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Hapavirus;s__Flanders hapavirus;t__ 0 0 0 0 0 0 0 259 259 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sanguinis;t__ 0 0 1 1 125 532 0 67473 68132 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Dactylosporangium;s__Dactylosporangium aurantiacum;t__ 0 0 12 0 23 0 0 228443 228478 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. H20;t__ 0 0 1 4 30 171 0 67749 67955 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;s__Bacteroides thetaiotaomicron;t__Bacteroides thetaiotaomicron VPI-5482 0 0 0 0 0 0 0 448 660 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halostagnicola;s__Halostagnicola larsenii;t__Halostagnicola larsenii XH-48 0 0 0 0 1 0 0 26826 26830 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Karnataka betasatellite;t__ 0 0 0 0 0 2 0 25 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage slur07;t__ 0 0 0 0 216 5 0 3121 3342 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__Pigeonpea sterility mosaic virus 2;t__ 0 0 0 0 0 0 0 290 290 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Aeromonas virus 25;t__ 0 0 0 0 1 0 0 3228 3229 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter ghanensis;t__ 0 0 0 0 3 2 0 3375 3579 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage vB_EcoM-UFV13;t__ 0 0 0 0 1069 0 0 2246 3315 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces varsoviensis;t__ 0 0 6 0 4 202 0 171344 171556 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter cetorum;t__Helicobacter cetorum MIT 00-7128 0 0 0 0 0 0 0 249 249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Rhadinovirus;s__Murid gammaherpesvirus 4;t__ 0 0 0 0 0 0 0 2389 2389 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Porcine stool-associated circular virus 5;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage GRCS;t__ 0 0 0 0 2 13 0 342 357 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Spheniscid herpesvirus 2;t__ 0 0 0 0 0 0 0 3290 3290 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__Fig mosaic emaravirus;t__ 0 0 0 0 0 0 0 294 294 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Potamipivirus;s__Potamipivirus A;t__Eel picornavirus 1 0 0 0 0 0 0 0 150 150 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Catenulisporales;f__Actinospicaceae;g__Actinospica;s__Actinospica robiniae;t__Actinospica robiniae DSM 44927 0 0 21 0 0 0 0 198348 198369 k__Viruses;p__unclassified bacterial viruses;c__Synechococcus phage S-CAM7;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 4322 4322 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium hassiacum;t__Mycobacterium hassiacum DSM 44199 0 0 5 10 1 303 0 101072 101391 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Carrot yellow leaf virus;t__ 0 0 0 0 0 0 0 327 327 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Chobar Gorge virus;t__ 0 0 0 0 0 0 0 341 341 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium nodulans;t__Methylobacterium nodulans ORS 2060 0 0 0 0 0 0 0 20191 21320 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces parvulus;t__ 0 0 8 0 0 631 0 142349 142988 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-17;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 53 53 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces lydicus;t__ 0 0 39 0 0 678 0 163310 164027 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter gangjinensis;t__ 0 0 0 6 0 8 0 54483 54497 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora marina;t__Saccharomonospora marina XMU15 0 0 17 0 29 55 0 119182 119283 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Piscirickettsiaceae;g__Methylophaga;s__Methylophaga frappieri;t__ 0 0 0 0 0 0 0 473 956 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella phage SHFML-26;t__ 0 0 0 0 70 1853 0 1456 3379 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl South Carolina virus;t__ 0 0 0 0 0 2 0 53 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Sao Paulo virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb49virus;s__Escherichia virus RB49;t__Enterobacteria phage RB49 0 0 0 0 0 0 0 3280 3280 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Nitrobacter;s__Nitrobacter hamburgensis;t__Nitrobacter hamburgensis X14 0 0 0 0 1 0 0 11732 12087 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. NRRL WC-3605;t__ 0 0 0 0 0 284 0 151155 151439 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Phytophthora alphaendornavirus 1;t__ 0 0 0 0 0 0 0 277 277 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Geobacillus;s__Geobacillus thermodenitrificans;t__Geobacillus thermodenitrificans NG80-2 0 0 0 0 0 0 0 1046 1153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage S-RIM50;t__ 0 0 0 1 0 171 0 3314 3486 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sp18virus;s__Escherichia virus VR20;t__Escherichia phage vB_EcoM_VR20 0 0 0 0 11 768 0 2627 3406 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia araii;t__Gordonia araii NBRC 100433 0 0 16 14 0 27 0 77889 77946 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Sphingomonas phage PAU;t__ 0 0 0 0 0 0 0 4387 4387 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinocatenispora;s__Actinocatenispora sera;t__ 8 0 6 0 1 0 0 138786 138801 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Nonanavirus;s__Salmonella virus 9NA;t__Salmonella phage 9NA 0 0 0 0 0 0 0 1057 1057 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Halogeometricum;s__Halogeometricum borinquense;t__Halogeometricum borinquense DSM 11551 1 0 11 0 13 14 0 56371 56410 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia niwae;t__Nocardia niwae NBRC 108934 = DSM 45340 0 0 2 16 11 553 0 145324 145906 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium avium;t__Mycobacterium avium subsp. paratuberculosis 0 0 1 1 0 37 0 96556 96595 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella hongkongensis;t__Loktanella hongkongensis DSM 17492 0 0 1 0 26 4 0 59949 59980 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas wittichii;t__Sphingomonas wittichii RW1 0 0 0 0 222 0 0 9745 10657 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella phage SHBML-50-1;t__ 0 0 0 0 159 1653 0 1520 3332 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Glycomycetales;f__Glycomycetaceae;g__Glycomyces;s__Glycomyces arizonensis;t__Glycomyces arizonensis DSM 44726 2 0 7 0 2 5 0 100797 100813 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Dylan;t__ 0 0 0 0 767 3 0 626 1396 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces hokutonensis;t__ 3 0 5 0 2 787 0 235431 236228 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Parapoxvirus;s__Parapoxvirus red deer/HL953;t__ 0 0 0 0 0 3 0 2794 2797 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia seriolae;t__ 0 0 9 29 35 18 0 165999 166090 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__Cutibacterium granulosum;t__Cutibacterium granulosum DSM 20700 0 0 0 0 5 0 0 41860 41865 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Sandaracinaceae;g__Sandaracinus;s__Sandaracinus amylolyticus;t__ 0 0 0 0 0 0 0 206546 206546 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Turncurtovirus;s__Turnip curly top virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM_Phobos;t__ 0 0 0 0 0 1 0 4589 4590 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Escherichia virus DT57C;t__ 0 0 0 0 1 141 0 2019 2161 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria marina;t__ 1 0 17 92 59 509 0 60532 61210 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 7;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pennisetum mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces megasporus;t__ 2 0 6 0 0 134 0 116493 116635 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Longispora;s__Longispora albida;t__Longispora albida DSM 44784 0 0 10 0 6 0 0 136351 136367 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage MX01;t__ 0 0 0 0 702 4 0 2672 3378 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces clavuligerus;t__ 0 0 21 0 0 324 0 137309 137654 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage 11895-B1;t__ 0 0 0 0 0 0 0 2528 2528 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus Ld17;t__Lactobacillus phage Ld17 0 0 0 0 0 291 0 368 659 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Palyam virus;t__ 0 0 0 0 0 0 0 361 361 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Chandipura vesiculovirus;t__Chandipura virus 0 0 0 0 0 0 0 222 222 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XVII. Incertae Sedis;g__Sulfobacillus;s__Sulfobacillus thermosulfidooxidans;t__ 0 0 0 0 0 0 0 501 501 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Spbetavirus;s__Staphylococcus phage SPbeta-like;t__ 0 0 0 0 0 0 0 2554 2554 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Salmonella phage vB_SnwM_CGG4-1;t__ 0 0 0 0 221 74 0 2902 3197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage jm2;t__ 0 0 0 0 35 19 0 567 621 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Tamiami mammarenavirus;t__ 0 0 0 0 0 0 0 211 211 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium maris;t__Corynebacterium maris DSM 45190 0 0 2 3 0 47 0 55699 55751 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Patiencevirus;s__Mycobacterium virus Patience;t__Mycobacterium phage Patience 0 0 0 0 0 0 0 1410 1410 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus fascians;t__Rhodococcus fascians A44A 0 0 3 11 1 36 5 118483 118540 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-41;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 61 61 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia aichiensis;t__Gordonia aichiensis NBRC 108223 0 0 36 25 0 121 0 101515 101697 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P092;t__ 0 0 0 0 0 368 0 702 1070 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Acidilobales;f__Acidilobaceae;g__Acidilobus;s__Acidilobus saccharovorans;t__Acidilobus saccharovorans 345-15 0 0 0 0 0 0 0 29929 29929 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Staphylococcus phage PT1028;t__ 0 0 0 0 0 0 0 312 312 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__;g__Crustavirus;s__Wenzhou crustavirus;t__Wenzhou Crab Virus 1 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__M12virus;s__Sinorhizobium virus M12;t__Sinorhizobium phage phiM12 0 0 0 0 0 1571 0 2323 3894 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Ikoma lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Erwinia phage PhiEaH1;t__ 0 0 0 0 0 0 0 4366 4366 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Slashvirus;s__Bacillus virus Slash;t__Bacillus phage Slash 0 0 0 0 0 0 0 1607 1607 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Acidianus filamentous virus 8;t__ 0 0 0 0 0 25 0 738 763 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao insect virus 12;t__ 0 0 0 0 0 0 0 197 197 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracasei;t__Lactobacillus paracasei subsp. paracasei 0 0 0 0 0 0 0 436 436 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage SPN9CC;t__ 0 0 0 28 260 273 0 241 802 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces turgidiscabies;t__Streptomyces turgidiscabies Car8 1 0 20 0 4 1950 0 213231 215206 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Plectrovirus;s__Spiroplasma phage SVTS2;t__ 0 0 0 0 0 0 0 25 136 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling hepe-like virus 2;t__ 0 0 0 0 0 0 0 248 248 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Tofla virus;t__ 0 0 0 0 0 0 0 364 364 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces venezuelae;t__Streptomyces venezuelae ATCC 10712 2 0 3 0 0 435 0 163534 163974 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Leuconostocaceae;g__Weissella;s__Weissella koreensis;t__Weissella koreensis KACC 15510 0 0 0 2 53 0 0 242 379 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Human alphaherpesvirus 1;t__ 0 0 0 0 0 8 0 3036 3044 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sripuvirus;s__Niakha sripuvirus;t__Niakha virus 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Lymphocryptovirus;s__Human gammaherpesvirus 4;t__Human herpesvirus 4 type 2 0 0 0 0 0 0 0 3455 3455 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Oropouche orthobunyavirus;t__Oropouche virus 0 0 0 0 0 0 0 235 235 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Js98virus;s__Escherichia virus QL01;t__Escherichia phage QL01 0 0 0 0 6 239 0 3165 3410 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium profundi;t__ 0 0 9 13 3 120 0 67221 67366 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage 3A;t__ 0 0 0 0 5 0 0 856 861 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Escherichia virus ADB2;t__Escherichia phage ADB-2 0 0 0 0 0 48 0 963 1011 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kp36virus;s__Klebsiella virus 1513;t__Klebsiella phage 1513 0 0 0 0 0 0 0 989 989 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 3;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Geobacillus phage GBSV1;t__ 0 0 0 0 0 357 0 336 693 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bornean orang-utan polyomavirus;t__ 0 0 0 0 0 0 0 103 103 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__;g__;s__Rhodospirillales bacterium URHD0088;t__ 0 1 11 0 0 0 0 132864 132876 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halorubrum;s__Halorubrum lacusprofundi;t__Halorubrum lacusprofundi ATCC 49239 0 0 0 0 0 0 0 8104 8626 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 187;t__ 0 0 0 0 23 83 0 686 792 k__Viruses;p__unclassified viruses;c__Biratnagar virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 182 182 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Actinomadura;s__Actinomadura atramentaria;t__Actinomadura atramentaria DSM 43919 0 0 10 4 11 9 0 134052 134086 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wuhan aphid virus 1;t__ 0 0 0 0 0 0 0 214 214 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Heliconius erato iflavirus;t__ 0 0 0 0 0 0 0 198 198 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Glycomycetales;f__Glycomycetaceae;g__Stackebrandtia;s__Stackebrandtia nassauensis;t__Stackebrandtia nassauensis DSM 44728 6 0 12 0 0 0 0 136813 136831 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Halopiger;s__Halopiger xanaduensis;t__Halopiger xanaduensis SH-6 0 0 0 0 0 0 0 13719 13741 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Novirhabdovirus;s__Viral hemorrhagic septicemia virus;t__Viral hemorrhagic septicemia virus Fil3 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella phage SHSML-45;t__ 0 0 0 338 28 0 0 1794 2160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Tepovirus;s__Potato virus T;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Luffa begomovirus betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rtpvirus;s__Escherichia virus ACGM12;t__Escherichia phage vB_Eco_ACG-M12 0 0 0 0 0 2 0 919 921 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 1358;t__ 0 0 0 0 0 0 0 737 737 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage BPS10C;t__ 0 0 0 0 1465 0 0 1726 3191 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ketogulonicigenium;s__Ketogulonicigenium vulgare;t__Ketogulonicigenium vulgare WSH-001 0 0 0 0 0 0 0 10034 10212 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Lentzea;s__Lentzea guizhouensis;t__ 0 0 40 0 12 0 0 199905 199957 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium rhodesiae;t__Mycobacterium rhodesiae NBB3 0 0 34 13 0 218 0 128049 128314 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Eastern equine encephalitis virus;t__ 0 0 0 0 0 0 0 233 233 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudoglutamicibacter;s__Pseudoglutamicibacter albus;t__Pseudoglutamicibacter albus DNF00011 1 0 39 20 13 0 0 49386 49459 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Bacillus phage phi105;t__ 0 0 0 0 0 0 0 786 786 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Halocynthiibacter;s__Halocynthiibacter arcticus;t__ 0 0 0 0 0 0 0 931 931 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Tungrovirus;s__Rice tungro bacilliform virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Velarivirus;s__Areca palm velarivirus 1;t__ 0 0 0 0 0 0 0 321 321 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai astro-like virus;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Ant Virus;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Erwinia phage phiEaH2;t__ 0 0 0 0 0 0 0 4860 4860 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus zeaxanthinifaciens;t__Paracoccus zeaxanthinifaciens ATCC 21588 0 0 3 0 14 23 0 60892 60932 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage ICP1;t__ 0 0 0 0 0 0 0 2519 2519 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. Soil763;t__ 2 0 6 10 73 25 0 70667 70783 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Bean necrotic mosaic virus;t__ 0 0 0 0 0 0 0 326 326 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Almendravirus;s__Puerto Almendras almendravirus;t__Puerto Almendras virus 0 0 0 0 0 0 0 237 237 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Rhinolophus bat coronavirus HKU2;t__ 0 0 0 0 0 0 0 543 543 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus A;t__ 0 0 0 0 0 0 0 351 351 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Luffa puckering and leaf distortion-associated DNA beta;t__Bitter gourd leaf curl betasatellite 0 0 0 0 0 1 0 26 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Wenzhou Tick Virus;t__ 0 0 0 0 0 0 0 359 359 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage M102AD;t__ 0 0 0 0 0 181 0 432 613 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei hepe-like virus 1;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__Cherry necrotic rusty mottle virus;t__ 0 0 0 0 0 0 0 168 168 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus paracasei;t__Lactobacillus paracasei ATCC 334 0 0 0 0 0 3 0 390 581 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 19;t__ 0 0 0 0 0 0 0 308 308 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Tree shrew mastadenovirus A;t__Tree shrew adenovirus 1 0 0 0 0 0 0 0 670 670 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Barmah Forest virus;t__ 0 0 0 0 0 0 0 229 229 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella phage SHSML-52-1;t__ 0 0 0 0 1031 0 0 2361 3392 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacter phage Tyrion;t__ 0 0 0 0 1 0 0 834 835 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Formica exsecta virus 2;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus VpaE1;t__Escherichia phage vB_EcoM-VpaE1 0 0 0 0 0 270 0 1498 1768 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage FSLSP088;t__ 0 0 0 0 0 262 0 927 1189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Human coronavirus HKU1;t__ 0 0 0 0 0 0 0 598 598 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterococcus phage ECP3;t__ 0 0 0 0 0 655 0 2255 2910 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__Prasinovirus;s__Ostreococcus mediterraneus virus 1;t__ 0 0 0 0 0 0 0 3866 3866 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Pyrodictiaceae;g__Hyperthermus;s__Hyperthermus butylicus;t__Hyperthermus butylicus DSM 5456 0 0 0 2 37 0 0 33304 33343 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage phiARI0923;t__ 122 0 0 0 0 0 0 547 669 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Mossman virus;t__ 0 0 0 0 0 0 0 332 332 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage ROSA;t__ 0 0 0 0 456 0 0 407 863 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage TEM123;t__ 0 0 0 0 0 0 0 875 875 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Yersinia phage PY54;t__ 0 0 0 0 0 0 0 926 926 k__BacteriaPlasmid;p__Aquificae;c__Aquificae;o__Aquificales;f__Hydrogenothermaceae;g__Persephonella;s__Persephonella marina;t__Persephonella marina EX-H1 0 0 0 0 0 0 0 1073 1073 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Cellulophaga phage phi12:2;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__dsDNA viruses, no RNA stage;c__Baculoviridae;o__;f__;g__Alphabaculovirus;s__Antheraea pernyi nucleopolyhedrovirus;t__ 0 0 0 0 0 0 0 2532 2532 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jenstvirus;s__Brevibacillus virus Jenst;t__Brevibacillus phage Jenst 0 0 0 0 0 0 0 2526 2526 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Sanxia water strider virus 6;t__ 0 0 0 0 0 0 0 457 457 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Lamium leaf distortion virus;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling hepe-like virus 1;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ascoviridae;o__;f__;g__Ascovirus;s__Spodoptera frugiperda ascovirus 1a;t__ 0 0 0 0 0 0 0 3138 3138 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis macrogoltabida;t__ 0 0 0 0 82 0 0 10744 11472 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Duck picornavirus GL/12;t__ 0 0 0 0 0 0 0 179 179 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Acidothermales;f__Acidothermaceae;g__Acidothermus;s__Acidothermus cellulolyticus;t__Acidothermus cellulolyticus 11B 0 0 6 0 0 0 0 48864 48870 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Septima3virus;s__Pseudomonas virus 73;t__Pseudomonas phage 73 0 0 0 0 62 302 0 495 859 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sk1virus;s__Lactococcus virus P008;t__ 0 0 0 0 0 57 0 513 570 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Chloriridovirus;s__Invertebrate iridescent virus 3;t__ 0 0 0 0 0 0 0 3821 3821 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Secunda5virus;s__Aeromonas virus Aes508;t__Aeromonas phage Aes508 0 0 0 0 273 497 0 2442 3212 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium dentium;t__Bifidobacterium dentium JCM 1195 = DSM 20436 0 0 1 0 0 14 0 52698 52713 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage S-MbCM100;t__ 0 0 0 19 26 17 0 3346 3408 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella sp. phage 1/41;t__ 0 0 0 0 0 0 0 870 870 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium gubbeenense;t__Microbacterium gubbeenense DSM 15944 2 0 55 6 12 72 0 60069 60216 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Methanobacterium phage psiM2;t__ 0 0 0 0 0 0 0 522 522 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Beihai barnacle viurs 1;t__ 0 0 0 0 0 0 0 373 373 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Bovine viral diarrhea virus 2;t__ 0 0 0 0 0 0 0 245 245 k__ArchaeaPlasmid;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus barophilus;t__Thermococcus barophilus MP 0 0 0 0 0 0 0 1077 1083 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Simian retrovirus 4;t__ 0 0 0 0 0 0 0 162 162 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Advenella;s__Advenella mimigardefordensis;t__Advenella mimigardefordensis DPN7 0 0 0 0 0 0 0 472 472 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella;s__Moraxella macacae;t__Moraxella macacae 0408225 0 0 0 0 0 0 0 107 107 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agromyces;s__Agromyces sp. Soil535;t__ 0 0 1 1 33 23 0 96435 96493 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus A;t__Bat adenovirus TJM 0 0 0 0 0 0 0 636 636 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 29;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Uganda S virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Southern elephant seal virus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Xp10virus;s__Xanthomonas phage Xop411;t__ 0 0 0 0 0 119 0 771 890 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Spodoptera exigua iflavirus 1;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Tsarbombavirus;s__Bacillus virus BCP78;t__Bacillus phage BCP78 0 0 0 0 0 0 0 3123 3123 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage P954;t__ 1 0 0 0 263 250 0 301 815 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Prochlorococcus phage MED4-184;t__ 0 0 0 0 0 0 0 766 766 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 88;t__ 0 0 0 0 56 429 0 379 864 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Lizard atadenovirus A;t__Lizard adenovirus 2 0 0 0 0 0 0 0 659 659 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Molossus molossus polyomavirus 1;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan arthropod virus 1;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Tylonycteris bat coronavirus HKU4;t__ 0 0 0 0 0 0 0 605 605 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage Tuc2009;t__ 0 0 0 0 0 83 0 683 766 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Nona33virus;s__Escherichia virus Min27;t__Escherichia phage Min27 0 0 0 23 37 1004 0 203 1267 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Escherichia virus EPS7;t__ 0 0 0 0 0 0 0 2227 2227 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai zhaovirus-like virus 2;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Fusarium poae negative-stranded virus 1;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Tomato ringspot virus;t__ 0 0 0 0 0 0 0 307 307 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia alni;t__Frankia alni ACN14a 0 0 19 0 0 112 0 149827 149958 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 2;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus WIV10;t__ 0 0 0 0 0 391 0 360 751 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus occultus;t__Natronococcus occultus SP4 0 0 0 0 0 0 0 6008 6016 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Curtovirus;s__Spinach severe curly top virus;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 12;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan heteroptera virus 1;t__ 0 0 0 0 0 0 0 322 322 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Dasheen mosaic virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Agatevirus;s__Bacillus virus Bobb;t__Bacillus phage Bobb 0 0 0 0 0 3 0 3202 3205 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Damien;t__ 0 0 0 0 179 618 0 570 1367 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Barnyardvirus;s__Mycobacterium virus Konstantine;t__Mycobacterium phage Konstantine 0 0 0 0 564 0 0 815 1379 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Tenuivirus;s__Rice grassy stunt tenuivirus;t__ 0 0 0 0 0 0 0 493 493 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Furovirus;s__Sorghum chlorotic spot virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__California encephalitis orthobunyavirus;t__La Crosse virus 0 0 0 0 0 0 0 246 246 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia arizonensis;t__ 0 0 1 11 1 24 0 143686 143723 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEp460;t__ 3 0 0 55 0 125 0 707 890 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paenibacillus phage Vegas;t__ 0 0 0 8 0 5 0 900 913 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Celery mosaic virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Elderberry carlavirus A;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sp18virus;s__Escherichia virus VR26;t__Escherichia phage vB_EcoM_VR26 0 0 0 0 4 664 0 2762 3430 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium doosanense;t__Corynebacterium doosanense CAU 212 = DSM 45436 0 0 129 15 0 355 0 52925 53435 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp. AAP93;t__ 0 0 0 10 14 19 0 85018 85061 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Porphyrobacter;s__Porphyrobacter mercurialis;t__ 0 0 0 8 3 0 0 69617 69628 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Mal de Rio Cuarto virus;t__ 0 0 0 0 0 0 0 565 565 k__Viruses;p__unclassified viruses;c__Aphis glycines virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 96 96 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces silaceus;t__ 1 0 15 0 3 1094 0 172151 173264 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 9;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage 933W sensu lato;t__Enterobacteria phage VT2-Sakai 0 0 0 6 915 0 0 297 1218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__Banana mild mosaic virus;t__ 0 0 0 0 0 0 0 147 147 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium humireducens;t__Corynebacterium humireducens NBRC 106098 = DSM 45392 0 0 5 15 0 184 0 53422 53626 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__;s__Ball python nidovirus 1;t__ 0 0 0 0 0 0 0 669 669 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Elderberry carlavirus E;t__ 0 0 0 0 0 0 0 170 170 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia terrae;t__ 0 0 5 38 0 0 0 113987 114030 k__Viruses;p__unclassified viruses;c__Lodeiro virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Tobacco vein distorting virus;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Hordeum vulgare alphaendornavirus;t__ 0 0 0 0 0 0 0 284 284 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage IME-SA4;t__ 0 0 0 0 0 3 0 833 836 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage eugene 12A10;t__ 0 0 0 0 0 1224 0 1540 2764 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Zinnia leaf curl virus-associated DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Barley yellow dwarf virus-kerII;t__ 0 0 0 0 0 0 0 114 114 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Phyllobacteriaceae;g__Chelativorans;s__Chelativorans sp. BNC1;t__ 0 0 0 21 0 0 0 9875 10451 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Mapuera rubulavirus;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage Ipla88;t__ 0 1 0 0 86 120 0 643 850 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia atyid shrimp virus 3;t__ 0 0 0 0 0 0 0 175 175 k__BacteriaPlasmid;p__Actinobacteria;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter radiotolerans;t__ 0 0 0 0 0 0 0 7763 7831 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Rio Bravo virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-CRM01;t__ 0 0 0 0 0 0 0 3571 3571 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Solon;t__Mycobacterium phage Solon 0 0 0 0 232 102 0 655 989 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__African green monkey simian foamy virus;t__ 0 0 0 0 0 0 0 262 262 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus D;t__ 0 0 0 0 0 0 0 901 901 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus D;t__ 0 0 0 0 0 0 0 901 901 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus thuringiensis;t__[Bacillus thuringiensis] serovar konkukian 0 0 0 0 0 0 0 1536 1542 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage Belinda;t__ 0 0 0 0 27 157 0 3062 3246 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Vibrio phage VEJphi;t__ 0 0 0 0 45 4 0 87 136 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Vibrio phage VfO3K6;t__ 0 0 0 0 136 0 0 39 175 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Vibrio phage VfO4K68;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 14;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Cavemovirus;s__Tobacco vein clearing virus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Tectiviridae;o__;f__;g__Tectivirus;s__Bacillus virus AP50;t__ 0 0 0 0 0 0 0 287 287 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage GEC-3S;t__ 0 0 0 0 1537 0 0 1731 3268 k__BacteriaPlasmid;p__Verrucomicrobia;c__Opitutae;o__Opitutales;f__Opitutaceae;g__;s__Opitutaceae bacterium TAV5;t__ 0 0 0 0 0 0 0 1996 1996 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 7502;t__ 0 0 0 0 0 0 0 1398 1467 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 14;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Huangpi Tick Virus 2;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Trematomus polyomavirus 1;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage Lrm1;t__ 0 0 0 0 0 28 0 771 799 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sugarcane mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium mageritense;t__Mycobacterium mageritense DSM 44476 = CIP 104973 0 0 1 6 0 1223 0 158093 159323 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Betaendornavirus;s__Gremmeniella abietina betaendornavirus 1;t__Gremmeniella abietina type B RNA virus XL1 0 0 0 0 0 0 0 207 207 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listonella phage phiHSIC;t__ 0 0 0 0 0 0 0 759 759 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Maize dwarf mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Poacevirus;s__Sugarcane streak mosaic virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus phage KC5a;t__ 0 0 0 4 0 0 0 760 764 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces coelicolor;t__Streptomyces coelicolor A3(2) 0 0 10 0 0 2063 0 171277 173350 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Jasmine ringspot virus;t__ 0 0 0 0 0 0 0 191 191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albus;t__ 1 0 27 0 8 672 4 166981 167693 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Maracuja mosaic virus;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Tadarida brasiliensis polyomavirus 1;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Copiparvovirus;s__Ungulate copiparvovirus 2;t__Porcine parvovirus 4 0 0 0 0 0 0 0 118 118 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Junin mammarenavirus;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Wphvirus;s__Bacillus virus WPh;t__Bacillus phage W.Ph. 0 0 0 0 0 0 0 3137 3137 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Adelaide River ephemerovirus;t__Adelaide River virus 0 0 0 0 0 0 0 292 292 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Obodhiang ephemerovirus;t__Obodhiang virus 0 0 0 0 0 0 0 294 294 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Asparagus virus 2;t__ 0 0 0 0 0 0 0 169 169 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. CNH287;t__ 0 0 7 0 6 89 0 135560 135662 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Escherichia virus If1;t__Enterobacteria phage If1 0 0 0 0 0 0 0 166 169 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia transvalensis;t__Nocardia transvalensis NBRC 15921 0 0 3 11 5 129 0 167284 167432 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bartonellaceae;g__Bartonella;s__Bartonella tribocorum;t__Bartonella tribocorum CIP 105476 0 0 0 0 0 0 0 455 466 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage RB43;t__ 0 0 0 0 0 0 0 3609 3609 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kp15virus;s__Klebsiella virus KP15;t__Klebsiella phage KP15 0 0 0 0 10 0 0 3478 3488 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shigella phage SfII;t__ 0 0 0 31 0 103 0 695 829 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Kribbella;s__Kribbella catacumbae;t__Kribbella catacumbae DSM 19601 0 0 12 0 2 90 0 192146 192250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus NJ01;t__Escherichia phage NJ01 0 0 0 0 0 70 0 1478 1548 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Moloney murine sarcoma virus;t__ 0 0 0 0 0 3 0 113 116 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Escherichia phage HK639;t__ 0 0 0 0 0 0 0 991 991 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 1;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-28;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 127 127 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Janibacter;s__Janibacter hoylei;t__Janibacter hoylei PVAS-1 63 0 67 51 17 2 0 62351 62551 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus xylanexedens;t__ 0 0 0 0 0 0 0 892 892 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Stx2-converting phage 86;t__ 2 0 0 30 330 77 0 765 1204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 63301;t__ 0 0 0 0 0 188 0 460 648 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pagevirus;s__Bacillus virus Palmer;t__Bacillus phage Palmer 0 0 0 0 62 246 0 491 799 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Octadecabacter;s__Octadecabacter arcticus;t__Octadecabacter arcticus 238 0 0 0 0 0 0 0 4760 5557 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Achromobacter phage JWAlpha;t__ 0 0 0 0 0 0 0 1446 1446 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus WIV12;t__ 0 0 0 0 0 0 0 591 591 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 5;t__Capreolus capreolus papillomavirus 1 0 0 0 0 0 0 0 160 160 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Andrographis yellow vein leaf curl betasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. GA-0227b;t__ 0 0 2 3 0 93 0 102802 102900 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia soli;t__Gordonia soli NBRC 108243 0 0 2 28 0 21 0 107355 107406 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Copiparvovirus;s__Ungulate copiparvovirus 1;t__Bovine parvovirus - 2 0 0 0 0 0 0 0 112 112 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 44;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Aguacate virus;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus Ld3;t__Lactobacillus phage Ld3 0 0 0 0 0 53 0 539 592 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas carbonis;t__Cellulomonas carbonis T26 36 0 7 8 45 100 0 78509 78705 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Fabavirus;s__Gentian mosaic virus;t__Mikania micrantha mosaic virus 0 0 0 0 0 0 0 183 183 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 11;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StauST398-3;t__ 0 0 0 0 272 40 0 515 827 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium cosmeticum;t__ 2 0 112 2 0 276 0 128842 129234 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis alba;t__Nocardiopsis alba ATCC BAA-2165 0 0 27 4 0 425 0 116492 116964 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter chlorophenolicus;t__Pseudarthrobacter chlorophenolicus A6 0 0 0 0 0 0 0 11704 11704 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia inefficax;t__ 0 0 17 0 0 1 0 176297 176315 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Iso805N;t__ 0 0 7 0 0 9 0 88611 88627 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Equus ferus caballus papillomavirus type 7;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus phage LfeInf;t__ 0 0 0 0 0 0 0 2121 2121 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia paucivorans;t__Nocardia paucivorans NBRC 100373 0 0 31 17 6 53 0 119677 119784 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__V5virus;s__Escherichia virus FV3;t__Escherichia phage FV3 0 0 0 0 0 106 0 2632 2738 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Metapneumovirus;s__Human metapneumovirus;t__ 0 0 0 0 0 0 0 266 266 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Streptomonospora;s__Streptomonospora alba;t__ 0 0 5 1 20 0 0 118053 118079 k__Viruses;p__dsDNA viruses, no RNA stage;c__Corticoviridae;o__;f__;g__Corticovirus;s__Pseudoalteromonas phage PM2;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Andromeda;t__ 0 0 0 0 0 316 0 669 985 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Riemerella phage RAP44;t__ 0 0 0 0 0 0 0 986 986 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage 5093;t__ 0 0 0 0 0 0 0 743 743 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen7918_21;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cyanophage NATL2A-133;t__ 0 0 0 0 0 0 0 950 950 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia sp. CNY236;t__ 0 0 2 2 6 19 0 105815 105844 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 71;t__ 0 0 0 0 7 203 0 652 862 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HCTV-5;t__ 0 0 0 0 0 0 0 2042 2042 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-5;t__ 0 0 0 0 0 0 0 40 40 k__Bacteria;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. GFB01;t__ 1 0 4 59 39 44 0 46234 46381 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Changuinola virus;t__ 0 0 0 0 0 0 0 378 378 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium japonicum;t__Sphingobium japonicum UT26S 0 0 0 0 0 0 0 3079 4559 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Jay2Jay;t__ 0 0 0 0 0 0 0 2670 2670 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage EvilGenius;t__ 0 0 0 0 76 39 0 963 1078 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Desulfurococcus;s__Desulfurococcus amylolyticus;t__Desulfurococcus amylolyticus 1221n 0 0 0 1 0 0 0 27303 27304 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage SA97;t__ 1 0 0 0 608 57 0 145 811 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 11;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Thalassomonas phage BA3;t__ 0 0 0 0 0 0 0 746 746 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bc431virus;s__Bacillus virus Deepblue;t__Bacillus phage Deep Blue 0 0 0 0 0 17 0 3133 3150 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Mason-Pfizer monkey virus;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus SJ2;t__Salmonella phage vB_SalM_SJ2 0 0 0 0 0 0 0 3049 3049 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Lagenaria siceraria alphaendornavirus;t__Lagenaria siceraria endornavirus-California 0 0 0 0 0 0 0 301 301 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 39;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ascoviridae;o__;f__;g__Ascovirus;s__Heliothis virescens ascovirus 3a;t__Heliothis virescens ascovirus 3e 0 1 0 0 0 0 0 3724 3725 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Halyomorpha halys virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Aparavirus;s__Kashmir bee virus;t__ 0 0 0 0 0 0 0 190 190 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium mustelae;t__ 0 0 0 0 0 0 0 1651 1651 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Nhumirim virus;t__ 0 0 0 0 0 0 0 217 217 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia casuarinae;t__ 0 0 11 0 0 47 0 108614 108672 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Salmonella virus UAB87;t__Enterobacteriaphage UAB_Phi87 0 0 0 0 0 128 0 1624 1752 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas mephitis;t__Luteimonas mephitis DSM 12574 0 0 4 0 458 4 0 67814 68280 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium mesophilum;t__Rubellimicrobium mesophilum DSM 19309 0 0 2 0 6 4 0 98140 98152 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter sp. UCD-THU;t__ 2 0 2 0 4 147 0 66113 66268 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces caatingaensis;t__ 3 1 30 0 0 430 0 140606 141070 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces yeochonensis;t__Streptomyces yeochonensis CN732 0 0 41 0 20 320 0 155997 156378 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Microtetraspora;s__Microtetraspora glauca;t__ 7 0 884 0 1 0 0 148152 149044 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria turfanensis;t__ 0 0 12 10 0 236 0 74580 74838 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium iranicum;t__Mycobacterium iranicum UM_TJL 0 0 2 2 0 1539 0 120977 122520 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Bidens mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Che12;t__ 0 0 0 0 38 0 0 1002 1040 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Senegalimassilia;s__Senegalimassilia anaerobia;t__Senegalimassilia anaerobia JC110 27 10 179 1 73 0 0 46645 46935 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp51virus;s__Bacillus virus Shanette;t__Bacillus phage Shanette 0 0 0 0 0 805 0 1972 2777 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 13;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Orthopneumovirus;s__Human orthopneumovirus;t__ 0 0 0 0 0 0 0 304 304 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Candidatus Ishikawaella;s__Candidatus Ishikawaella capsulata;t__Candidatus Ishikawaella capsulata Mpkobe 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Secunda5virus;s__Aeromonas virus Aes12;t__Aeromonas phage Aes012 0 0 0 0 235 0 0 3004 3239 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Feline astrovirus D1;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 47;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Lettuce infectious yellows virus;t__ 0 0 0 0 0 0 0 304 304 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__;s__St-Valerien swine virus;t__Calicivirus pig/AB90/CAN 0 0 0 0 0 0 0 128 128 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium paludicola;t__ 0 0 2 0 15 122 0 68077 68216 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium sp. Root236;t__ 0 0 9 0 11 22 0 78341 78383 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium abscessus;t__ 0 0 1 2 0 769 0 100571 101343 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage vB_EfaS_IME196;t__ 0 0 0 0 0 0 0 777 777 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Smoothievirus;s__Gordonia virus ClubL;t__Gordonia phage ClubL 0 0 0 0 0 0 0 1852 1852 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. SBT349;t__ 0 0 8 0 2 96 0 159877 159983 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces dentalis;t__Actinomyces dentalis DSM 19115 0 0 3 0 0 31 0 70371 70405 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Salmonella phage ST64B;t__ 0 0 0 1 0 0 0 801 802 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Providencia phage Redjac;t__ 0 0 0 0 0 0 0 1162 1162 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Achromobacter phage phiAxp-2;t__ 0 0 0 0 0 0 0 1244 1244 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium halotolerans;t__Corynebacterium halotolerans YIM 70093 = DSM 44683 0 0 3 10 0 47 0 62655 62715 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium massiliense;t__Aeromicrobium massiliense JC14 0 0 11 1 10 0 0 66241 66263 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium chelonae;t__Mycobacterium chelonae CCUG 47445 0 0 1 0 0 3 0 100592 100596 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora setae;t__Kitasatospora setae KM-6054 5 0 192 0 365 879 0 174224 175665 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Velarivirus;s__Grapevine leafroll-associated virus 7;t__ 0 0 0 0 0 0 0 328 328 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinokineospora;s__Actinokineospora spheciospongiae;t__ 0 0 27 0 26 0 0 150039 150092 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sp18virus;s__Escherichia virus VR25;t__Escherichia phage vB_EcoM_VR25 0 0 0 0 6 1446 0 1964 3416 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas sp. Mitacek01;t__ 4 0 3 1 66 2 0 72228 72305 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kama virus;t__ 0 0 0 0 0 0 0 213 213 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium sp. DL1;t__ 30 0 1302 0 0 24 0 55583 56939 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Frondihabitans;s__Frondihabitans sp. Leaf304;t__ 1 0 0 0 19 0 0 68907 68927 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella virus Pss1;t__Shigella phage pSs-1 0 0 0 0 4 837 0 2458 3299 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage TP21-L;t__ 0 0 0 0 0 0 0 749 749 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria turfanensis;t__ 0 0 0 0 0 25 0 8158 8344 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus jostii;t__Rhodococcus jostii RHA1 0 0 11 51 12 127 0 155894 156095 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Kappapapillomavirus;s__Kappapapillomavirus 2;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage EfaCPT1;t__ 0 0 0 0 0 61 0 757 818 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Mandarivirus;s__Indian citrus ringspot virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cvm10virus;s__Escherichia virus CVM10;t__Escherichia phage vB_EcoM_ECO1230-10 0 0 0 0 0 0 0 833 833 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia nova;t__Nocardia nova SH22a 2 0 15 23 30 374 0 166526 166970 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces vitaminophilus;t__Streptomyces vitaminophilus DSM 41686 0 0 5 0 1 14 0 128331 128351 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Smaragdicoccus;s__Smaragdicoccus niigatensis;t__Smaragdicoccus niigatensis DSM 44881 = NBRC 103563 0 0 8 13 10 0 0 106344 106375 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe yuevirus-like virus 1;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Simbu orthobunyavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 8;t__ 0 0 0 0 0 0 0 270 270 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus F;t__Simian adenovirus 18 0 0 0 0 0 0 0 639 639 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__Cutibacterium acnes;t__Propionibacterium acnes KPA171202 2 0 11 0 13 860 0 50319 51205 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Ononis yellow mosaic virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus SETP13;t__Salmonella phage SETP13 0 0 0 0 50 188 0 615 853 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Curtobacterium;s__Curtobacterium flaccumfaciens;t__Curtobacterium flaccumfaciens UCD-AKU 0 0 0 2 29 57 0 73493 73581 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Yellowstone lake phycodnavirus 3;t__ 0 0 0 0 0 0 0 3429 3429 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Myxococcaceae;g__Myxococcus;s__Myxococcus fulvus;t__Myxococcus fulvus HW-1 0 0 1 86 0 0 0 179984 180071 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Omegapapillomavirus;s__Omegapapillomavirus 1;t__Ursus maritimus papillomavirus 1 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Bruin;t__ 0 0 0 0 1147 34 0 303 1484 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage LP-101;t__ 0 0 0 0 0 60 0 815 875 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Acinetobacter phage Bphi-B1251;t__ 0 0 0 0 0 0 0 907 907 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage J-1;t__ 0 0 0 0 0 124 0 694 818 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aurantimonadaceae;g__Martelella;s__Martelella sp. AD-3;t__ 0 0 0 0 0 0 0 8805 9624 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage BtCS33;t__ 0 0 0 0 1 435 0 403 839 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 7 LDMD-2013;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage 340;t__ 0 0 0 0 91 10 0 545 646 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium terpenotabidum;t__Corynebacterium terpenotabidum Y-11 1 0 13 8 0 152 0 54850 55024 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus B;t__ 0 0 0 0 0 0 175 531 706 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P70virus;s__Listeria virus LP110;t__Listeria phage LP-110 0 0 0 0 0 558 0 744 1302 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-6;t__ 0 0 0 0 0 0 0 50 50 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium tuberculosis;t__Mycobacterium tuberculosis H37Rv 0 0 0 2 0 37 0 88191 88230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Omikronpapillomavirus;s__Omikronpapillomavirus 1;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Upsilonpapillomavirus;s__Upsilonpapillomavirus 1;t__Tursiops truncatus papillomavirus 1 0 0 0 0 0 0 0 161 161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Yersinia phage phiR201;t__ 0 0 0 0 22 0 0 2431 2453 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Escherichia phage vB_EcoS_FFH1;t__ 0 0 0 68 458 0 0 1643 2169 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Haloferacaceae;g__Haloferax;s__Haloferax volcanii;t__Haloferax volcanii DS2 1 0 3 0 6 138 0 56807 56955 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kp36virus;s__Klebsiella virus KP36;t__Klebsiella phage KP36 0 0 0 0 0 0 0 995 995 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. BoleA5;t__ 0 0 30 0 14 221 0 172509 172774 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Lesavirus 2;t__ 0 0 0 0 0 0 0 151 151 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Segniliparaceae;g__Segniliparus;s__Segniliparus rugosus;t__Segniliparus rugosus ATCC BAA-974 1 0 2 4 0 43 0 71697 71747 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Louse Fly Virus 9;t__ 0 0 0 0 0 0 0 227 227 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces ossamyceticus;t__ 0 0 5 0 0 441 0 183327 183773 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Deformed wing virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Cronobacter virus ESP29491;t__ 0 0 0 0 0 0 0 982 982 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian adenovirus 8;t__ 0 0 0 0 0 1 0 712 713 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage A118;t__ 0 0 0 0 0 20 0 796 816 k__Viruses;p__dsDNA viruses, no RNA stage;c__Phycodnaviridae;o__;f__;g__;s__Yellowstone lake phycodnavirus 2;t__ 0 0 0 0 0 0 0 3420 3420 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Hydrogenobaculum phage 1;t__ 0 0 0 0 0 0 0 387 387 k__BacteriaPlasmid;p__Aquificae;c__Aquificae;o__Desulfurobacteriales;f__Desulfurobacteriaceae;g__Thermovibrio;s__Thermovibrio ammonificans;t__Thermovibrio ammonificans HB-1 0 0 0 0 0 0 0 1531 1531 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Biquartavirus;s__Aeromonas virus 44RR2;t__ 0 0 0 0 1529 0 0 1942 3471 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Fabavirus;s__Broad bean wilt virus 2;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou channeled applesnail virus 2;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Maraba vesiculovirus;t__Maraba virus 0 0 0 0 0 0 0 222 222 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium gilvum;t__Mycobacterium gilvum Spyr1 0 0 1 4 0 2430 0 108519 110954 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus H;t__Simian adenovirus DM-2014 0 0 0 0 0 0 0 653 653 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Spirillospora;s__Spirillospora albida;t__ 0 0 8 8 11 0 0 120451 120478 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium;s__Cutibacterium avidum;t__Cutibacterium avidum 44067 0 0 0 0 39 116 0 50367 50522 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei orthoptera virus 3;t__ 0 0 0 0 0 0 0 206 206 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. URHA0020;t__ 1 0 19 1 0 21 0 93318 93360 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Panchino;t__ 0 0 0 0 252 194 0 424 870 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pectobacterium phage PM1;t__ 0 0 0 0 0 0 0 1101 1101 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__;g__;s__Rickettsiales bacterium Ac37b;t__ 0 0 0 0 0 0 0 1324 1324 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium aromaticivorans;t__Novosphingobium aromaticivorans DSM 12444 0 1 1 47 10 41 0 71131 71231 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sulfidophilum;t__ 0 0 0 0 0 0 0 5537 5563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 1;t__Human papillomavirus type 32 0 0 0 0 0 0 0 159 159 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cardiospermum yellow leaf curl betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Haloferacales;f__Halorubraceae;g__Halolamina;s__Halolamina sediminis;t__ 4 0 2 1 5 51 0 56654 56717 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium sp. Root1290;t__ 0 0 5 0 7 14 0 85277 85303 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Atypical porcine pestivirus;t__Atypical porcine pestivirus 1 0 0 0 0 0 0 0 218 218 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrinema;s__Natrinema versiforme;t__Natrinema versiforme JCM 10478 0 0 0 0 25 54 0 83603 83682 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage PWH3a-P1;t__ 0 0 0 0 0 0 0 2583 2583 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. M26;t__ 0 0 3 5 0 123 0 114479 114610 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cyanophage 9515-10a;t__ 0 0 0 0 0 68 0 873 941 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage IC1;o__;f__;g__;s__;t__ 0 307 0 0 0 0 0 492 799 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xylella;s__Xylella fastidiosa;t__Xylella fastidiosa 9a5c 0 0 0 0 0 0 0 968 1047 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Schizot4virus;s__Vibrio virus ValKK3;t__Vibrio phage ValKK3 0 0 0 0 0 0 0 4961 4961 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus F;t__ 0 0 0 0 0 0 0 133 133 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia amicalis;t__Gordonia amicalis NBRC 100051 = JCM 11271 0 0 1 31 0 359 0 97740 98131 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Triavirus;s__Staphylococcus phage Ipla35;t__ 0 0 0 0 137 492 0 277 906 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pakpunavirus;s__Pseudomonas virus PAKP4;t__Pseudomonas phage PAK_P4 0 0 0 0 0 0 0 1862 1862 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage StauST398-1;t__ 0 0 0 0 0 21 0 883 904 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus haemolyticus;t__Staphylococcus haemolyticus JCSC1435 0 0 0 0 0 0 0 215 253 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 60;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__unclassified archaeal viruses;c__Hyperthermophilic Archaeal Virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 353 353 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 79;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Hemipteran ambidensovirus 1;t__Planococcus citri densovirus 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Odontoglossum ringspot virus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Groundnut bud necrosis orthotospovirus;t__Peanut bud necrosis virus 0 0 0 0 0 0 0 331 331 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 4;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 7;t__ 0 0 0 0 0 0 0 64 64 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus lindneri;t__ 0 0 0 0 0 8 0 445 709 k__Bacteria;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Thermanaerovibrio;s__Thermanaerovibrio acidaminovorans;t__Thermanaerovibrio acidaminovorans DSM 6589 1 0 0 0 7 0 0 36961 36969 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium marinum;t__Corynebacterium marinum DSM 44953 0 0 0 0 0 13 0 1973 2436 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Koolpinyah ephemerovirus;t__Koolpinyah virus 0 0 0 0 0 0 0 322 322 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Rhinovirus C;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage PL-1;t__ 0 0 0 0 0 712 0 65 777 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseoaurantiacus;t__Streptomyces griseoaurantiacus M045 0 0 3 0 0 408 0 153748 154159 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Kutzneria;s__Kutzneria albida;t__Kutzneria albida DSM 43870 0 0 49 0 57 10 0 197382 197498 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Human immunodeficiency virus 1;t__ 0 0 0 0 0 0 0 183 183 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Brachybacterium;s__Brachybacterium phenoliresistens;t__ 1 0 3 5 6 23 0 83650 83688 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kp36virus;s__Klebsiella virus Sushi;t__Klebsiella phage Sushi 0 0 0 0 0 82 0 893 975 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Tg1virus;s__Yersinia virus TG1;t__Yersinia phage vB_YenM_TG1 0 0 0 0 0 1318 0 1924 3242 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Escherichia virus T5;t__ 0 0 0 0 0 11 0 2423 2434 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Nocardiopsaceae;g__Nocardiopsis;s__Nocardiopsis xinjiangensis;t__Nocardiopsis xinjiangensis YIM 90004 0 0 1 0 0 455 0 105983 106439 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces aureus;t__ 0 0 11 0 6 898 0 197385 198300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage vB_PaeM_PS24;t__ 0 0 0 0 1117 0 0 574 1691 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Haloterrigena;s__Haloterrigena turkmenica;t__Haloterrigena turkmenica DSM 5511 0 0 0 0 0 0 0 31013 31022 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella virus P22;t__ 0 0 0 1 0 76 0 757 834 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. EPa45;t__ 0 0 3 2 0 160 0 123383 123548 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Aparavirus;s__Israeli acute paralysis virus;t__ 0 0 0 0 0 0 0 189 189 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrinema;s__Natrinema altunense;t__ 0 0 1 0 22 0 0 75423 75446 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hermit crab virus 4;t__ 0 0 0 0 0 0 0 587 587 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bc431virus;s__Bacillus virus Bc431;t__Bacillus phage vB_BceM_Bc431v3 0 0 0 0 0 0 0 3172 3172 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage 7-11;t__ 0 0 0 0 0 0 0 1798 1798 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Sclerophthora macrospora virus B;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacteroides phage B124-14;t__ 0 0 0 0 0 0 0 943 943 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 25;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Riptortus pedestris virus-1;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus HY02;t__Escherichia phage HY02 0 0 0 0 0 267 0 1458 1725 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage SKML-39;t__ 0 0 0 0 0 0 0 3192 3192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage g341c;t__ 0 0 0 10 0 101 0 708 819 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Cherry leaf roll virus;t__ 0 0 0 0 0 0 0 283 283 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Phikzvirus;s__Pseudomonas phage 201phi2-1;t__ 0 0 0 0 0 0 0 6333 6333 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei earwig virus 3;t__ 0 0 0 0 0 0 0 261 261 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage ECML-117;t__ 0 0 0 0 0 0 0 1337 1337 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage BritBrat;t__ 0 0 0 0 0 2 0 1108 1110 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian adenovirus C;t__ 0 0 0 0 0 0 0 687 687 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Feline calicivirus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Msw3virus;s__Edwardsiella virus MSW3;t__Edwardsiella phage MSW-3 0 0 0 0 0 0 0 854 854 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage SAP-2;t__ 0 0 0 0 0 0 0 358 358 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Macluravirus;s__Chinese yam necrotic mosaic virus;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage YMC11/12/R2315;t__ 0 0 0 0 891 0 0 5 896 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus;s__Lactobacillus amylovorus;t__ 0 0 0 0 0 0 0 356 392 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Ebolavirus;s__Zaire ebolavirus;t__ 0 0 0 0 0 0 0 379 379 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage 23MRA;t__ 0 0 0 0 0 147 0 714 861 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage qdvp001;t__ 0 0 0 0 0 0 0 2668 2668 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus B;t__Human adenovirus B2 0 0 0 0 0 2 1 707 710 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Brevicoryne brassicae virus;t__Brevicoryne brassicae virus - UK 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage P-TIM40;t__ 0 0 0 0 0 0 0 3772 3772 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus fascians;t__Rhodococcus fascians D188 0 0 8 53 31 65 0 102642 102799 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sfi11virus;s__Streptococcus phage 858;t__ 15 0 0 0 80 428 0 187 710 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus virus 9874;t__ 0 0 0 0 16 16 0 620 652 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Alfalfa leaf curl virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 5;t__ 0 0 0 0 0 0 0 315 315 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Goukovirus;s__Yichang insect goukovirus;t__Yichang Insect virus 0 0 0 0 0 0 0 210 210 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pagevirus;s__Bacillus virus Pony;t__Bacillus phage Pony 0 0 0 0 0 0 0 796 796 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Muvirus;s__Shigella virus SfMu;t__Shigella phage SfMu 0 0 0 0 0 151 0 591 742 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 28;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage phiARI0746;t__ 304 0 0 0 0 23 0 336 663 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Elderberry carlavirus C;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Peru tomato mosaic virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Drosophila subobscura Nora virus;t__ 0 0 0 0 0 0 0 245 245 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. NRRL B-24484;t__ 0 0 70 0 246 200 0 176410 176926 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Gilesvirus;s__Mycobacterium virus Giles;t__Mycobacterium phage Giles 0 0 0 0 0 0 0 1074 1074 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Macaca mulatta polyomavirus 1;t__ 0 0 0 0 0 0 0 104 104 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium hubeiense;t__ 0 0 4 1 0 7 0 50200 50212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Acidianus filamentous virus 3;t__ 0 0 0 0 0 48 0 760 808 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Paraiso Escondido virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Sanxia Water Strider Virus 5;t__ 0 0 0 0 0 0 0 259 259 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Thrush coronavirus HKU12;t__Thrush coronavirus HKU12-600 0 0 0 0 0 0 0 527 527 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus JMY-2014;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Sonchus yellow net nucleorhabdovirus;t__ 0 0 0 0 0 0 0 274 274 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rogue1virus;s__Escherichia virus AKS96;t__Escherichia phage vB_EcoS_AKS96 0 0 0 0 0 624 0 290 914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Synechococcus phage S-CAM8;t__ 0 0 0 13 16 1 0 3398 3428 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Tacheng Tick Virus 7;t__ 0 0 0 0 0 0 0 268 268 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Cp1virus;s__Streptococcus virus Cp1;t__Streptococcus phage Cp-1 0 0 0 0 0 0 0 386 386 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Rat bocavirus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Chaetoceros lorenzianus DNA virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pomovirus;s__Beet soil-borne virus;t__ 0 0 0 0 0 0 0 242 242 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Formica exsecta virus 1;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 5;t__ 0 0 0 0 0 0 0 173 173 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium gorillae;t__ 0 0 3 3 33 146 0 73646 73831 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora azurea;t__Saccharomonospora azurea NA-128 0 0 7 0 20 87 0 94793 94907 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Ralstonia phage p12J;t__ 0 0 0 0 0 0 0 142 142 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus rugosus;t__Streptacidiphilus rugosus AM-16 2 4 66 0 415 427 0 179137 180051 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas elodea;t__Sphingomonas elodea ATCC 31461 0 1 0 1 1 24 0 82219 82246 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium phlei;t__ 0 0 3 7 1 380 0 106601 106992 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Sedimenticola;s__Sedimenticola thiotaurini;t__ 0 0 0 0 0 0 0 666 666 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Xylella phage Xfas53;t__ 0 0 0 0 0 0 0 733 733 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Bombyx mori iflavirus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage 3MRA;t__ 0 0 0 0 0 76 0 762 838 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Lautropia;s__Lautropia mirabilis;t__Lautropia mirabilis ATCC 51599 0 2 4 11 0 0 0 62671 62688 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium colombiense;t__Mycobacterium colombiense CECT 3035 0 0 2 5 0 158 0 111396 111561 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces acidiscabies;t__Streptomyces acidiscabies 84-104 0 0 12 0 0 360 0 219283 219655 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus ViI;t__Salmonella phage ViI 0 0 0 0 47 221 0 2873 3141 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sulphureus;t__Streptomyces sulphureus DSM 40104 71 0 0 0 1 75 0 141845 141992 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces vietnamensis;t__ 3 0 146 0 7 2529 0 174657 177342 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Mamastrovirus 3;t__ 0 0 0 0 0 0 0 134 134 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermatophilaceae;g__Kineosphaera;s__Kineosphaera limosa;t__Kineosphaera limosa NBRC 100340 15 0 118 248 3 0 0 96242 96626 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Dobsonia moluccensis polyomavirus 1;t__Bat polyomavirus 5a 0 0 0 0 0 0 0 101 101 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinoalloteichus;s__Actinoalloteichus cyanogriseus;t__ 0 0 8 0 15 0 0 120221 120244 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus phage D4412;t__ 0 0 0 0 0 69 0 388 457 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Decapod ambidensovirus 1;t__Cherax quadricarinatus densovirus 0 0 0 0 0 0 0 126 126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage Ln-8;t__ 0 0 0 0 0 323 0 255 578 k__Viruses;p__unclassified viruses;c__Penicillium aurantiogriseum foetidus-like virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 74 74 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces subrutilus;t__ 0 0 0 0 0 0 0 4142 4142 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan pillworm virus 2;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__New Jersey vesiculovirus;t__Vesicular stomatitis New Jersey virus 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage RB32;t__ 0 0 0 0 2 468 0 2847 3317 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Maize fine streak nucleorhabdovirus;t__ 0 0 0 0 0 0 0 275 275 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces rimosus;t__Streptomyces rimosus subsp. rimosus 1 0 19 0 5 525 0 191007 191557 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Rice yellow stunt nucleorhabdovirus;t__ 0 0 0 0 0 0 0 280 280 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Taro vein chlorosis nucleorhabdovirus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Maize Iranian mosaic nucleorhabdovirus;t__ 0 0 0 0 0 0 0 247 247 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage Vi II-E1;t__ 0 0 0 0 0 0 0 901 901 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Psychrobacter phage Psymv2;t__ 0 0 0 0 0 0 0 714 714 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Riggi;t__ 0 0 0 0 0 132 0 864 996 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Negevirus;s__Loreto virus;t__ 0 0 0 0 0 0 0 182 182 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Glycomycetales;f__Glycomycetaceae;g__Glycomyces;s__Glycomyces sp. NRRL B-16210;t__ 10 0 13 0 1 1 0 99159 99184 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Anopheles flavivirus Liberia/2013;t__Anopheles flavivirus variant 1 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Bronvirus;s__Mycobacterium phage bron;t__ 0 0 0 0 0 0 0 1469 1469 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces odontolyticus;t__Actinomyces odontolyticus ATCC 17982 0 0 161 0 1 40 0 47667 47869 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 17 LDMD-2013;t__Circoviridae 4 LDMD-2013 0 0 0 0 0 0 0 67 67 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Grapevine Bulgarian latent virus;t__ 0 0 0 0 0 0 0 263 263 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Tupaia paramyxovirus;t__ 0 0 0 0 0 0 0 358 358 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter sphaeroides;t__Rhodobacter sphaeroides ATCC 17025 0 0 0 0 0 0 0 25395 26780 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Salinarchaeum;s__Salinarchaeum sp. Harcht-Bsk1;t__ 0 0 2 0 0 0 0 65103 65105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Globuloviridae;o__;f__;g__Globulovirus;s__Thermoproteus tenax spherical virus 1;t__ 0 0 0 0 0 0 0 418 418 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Soil797;t__ 18 0 80 1 0 23 0 87554 87692 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium testaceum;t__Microbacterium testaceum StLB037 0 0 0 0 10 56 0 69345 69411 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Lit1virus;s__Pseudomonas virus Ab09;t__Pseudomonas phage vB_PaeP_C2-10_Ab09 0 0 0 0 0 173 0 1267 1440 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia bronchialis;t__Gordonia bronchialis DSM 43247 0 0 95 57 0 697 0 103323 104172 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium hydrocarbonoxydans;t__Microbacterium hydrocarbonoxydans NBRC 103074 0 0 0 0 6 163 18 69156 69343 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Pacc40;t__ 0 0 0 0 99 247 0 825 1171 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage GUmbie;t__ 0 0 0 7 557 349 0 234 1147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz7virus;s__Pseudomonas virus KPP21;t__Pseudomonas phage KPP21 0 0 0 0 0 0 0 1468 1468 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;t__Pseudonocardia acaciae DSM 45401 0 0 7 0 5 12 0 198415 198439 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia sp. Root4;t__ 0 0 0 0 52 0 0 77282 77334 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter globiformis;t__Arthrobacter globiformis NBRC 12137 3 0 2 4 92 24 0 98723 98848 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium virus Ardmore;t__ 0 0 0 2 368 221 0 451 1042 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. NRRL S-87;t__ 0 0 6 0 7 458 0 162068 162539 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Prauserella;s__Prauserella rugosa;t__ 0 0 6 0 13 0 0 104220 104239 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Brevibacteriaceae;g__Brevibacterium;s__Brevibacterium senegalense;t__ 3 0 14 60 0 14 0 67756 67847 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Conexibacteraceae;g__Conexibacter;s__Conexibacter woesei;t__Conexibacter woesei Iso977N 1 0 0 0 0 0 0 113885 113886 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Panine alphaherpesvirus 3;t__Chimpanzee herpesvirus strain 105640 0 0 0 0 0 43 0 3020 3063 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis halophila;t__Amycolatopsis halophila YIM 93223 0 0 17 0 20 16 0 110958 111011 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Okra mosaic virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Crimean-Congo hemorrhagic fever orthonairovirus;t__ 0 0 0 0 0 0 0 379 379 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Agrican357virus;s__Erwinia virus Ea35-70;t__Erwinia phage Ea35-70 0 0 0 0 0 0 0 5421 5421 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. WMMB 714;t__ 0 0 3 0 6 160 0 131664 131833 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Burkholderia phage ST79;t__ 0 0 0 0 0 0 0 708 708 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Sparus aurata polyomavirus 1;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Wyeomyia orthobunyavirus;t__Tucunduba virus 0 0 0 0 0 0 0 242 242 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Sanguibacteraceae;g__Sanguibacter;s__Sanguibacter keddieii;t__Sanguibacter keddieii DSM 10542 2 0 17 65 0 0 0 84984 85068 k__Bacteria;p__Chloroflexi;c__Thermomicrobia;o__Sphaerobacterales;f__Sphaerobacteraceae;g__Sphaerobacter;s__Sphaerobacter thermophilus;t__Sphaerobacter thermophilus DSM 20745 0 0 0 0 0 0 0 79873 79873 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Silanimonas;s__Silanimonas lenta;t__Silanimonas lenta DSM 16282 0 52 4 1 44 0 0 52747 52848 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Bipolar;t__ 0 0 0 0 304 363 0 512 1179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cc31virus;s__Enterobacter virus PG7;t__Enterobacter phage PG7 0 0 0 0 0 0 0 3465 3465 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Pseudoclavibacter;s__Pseudoclavibacter soli;t__Pseudoclavibacter soli DSM 23366 0 0 4 2 5 0 0 44427 44438 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceaniovalibus;s__Oceaniovalibus guishaninsula;t__Oceaniovalibus guishaninsula JLT2003 0 10 3 0 81 0 0 57710 57815 k__BacteriaPlasmid;p__Bacteroidetes;c__;o__Bacteroidetes Order II. Incertae sedis;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus marinus;t__Rhodothermus marinus DSM 4252 0 0 0 0 0 0 0 2452 2502 k__Bacteria;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Ramlibacter;s__Ramlibacter tataouinensis;t__Ramlibacter tataouinensis TTB310 0 1 0 8 34 0 0 81360 81403 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Frigoribacterium;s__Frigoribacterium sp. Leaf254;t__ 0 0 0 0 48 0 0 68420 68468 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp. KRMCY2;t__ 0 0 4 10 11 18 0 89861 89904 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Desulfurococcaceae;g__Aeropyrum;s__Aeropyrum camini;t__Aeropyrum camini SY1 = JCM 12091 0 0 0 0 0 0 0 31745 31745 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces collinus;t__Streptomyces collinus Tu 365 4 0 14 0 5 1507 0 163928 165458 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Psychrobacter phage pOW20-A;t__ 0 0 0 0 0 0 0 816 816 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Brachybacterium;s__Brachybacterium squillarum;t__Brachybacterium squillarum M-6-3 0 0 5 44 14 0 0 63753 63816 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus C;t__Human adenovirus 5 0 0 0 0 0 0 0 718 718 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia higoensis;t__Nocardia higoensis NBRC 100133 0 0 5 15 15 197 0 139037 139269 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides luteus;t__ 0 0 2 0 0 0 0 115070 115072 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia thailandica;t__Nocardia thailandica NBRC 100428 1 0 3 14 8 82 0 135744 135852 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia sp. Root112D2;t__ 0 0 0 3 40 6 0 68080 68129 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Dermacoccus;s__Dermacoccus nishinomiyaensis;t__ 0 0 74 90 68 378 0 59970 60580 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces subrutilus;t__ 0 0 15 0 0 356 0 157358 157729 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus Jersey;t__Salmonella phage Jersey 0 0 0 0 1 18 0 849 868 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium heraklionense;t__ 0 0 0 1 0 13 0 95794 95809 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage phiBU01;t__ 0 0 0 0 0 308 0 566 874 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Cellulophaga phage phi12a:1;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 2;t__Human papillomavirus type 10 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Moonvirus;s__Citrobacter virus Moon;t__Citrobacter phage Moon 0 0 0 0 21 0 0 3385 3406 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Nakamurellales;f__Nakamurellaceae;g__Nakamurella;s__Nakamurella lactea;t__Nakamurella lactea DSM 19367 1 0 16 0 0 0 0 116308 116325 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. RAC03;t__ 0 0 0 0 0 16 0 21895 22749 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage HK620;t__ 0 0 0 13 0 0 0 752 765 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HRTV-5;t__ 0 0 0 0 0 46 0 1476 1522 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas flavigena;t__Cellulomonas flavigena DSM 20109 6 0 9 14 0 81 0 82353 82463 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. CNS606;t__ 0 0 8 0 49 112 0 118344 118513 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Croceicoccus;s__Croceicoccus naphthovorans;t__ 0 0 0 1 0 0 0 6233 6393 k__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales Family XVII. Incertae Sedis;g__Thermaerobacter;s__Thermaerobacter subterraneus;t__Thermaerobacter subterraneus DSM 13965 0 0 0 0 0 21 0 57740 57761 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cr3virus;s__Cronobacter virus CR3;t__Cronobacter phage CR3 0 0 0 0 0 1080 0 1905 2985 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 17;t__ 0 0 0 0 0 0 0 135 135 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Magnetospira;s__Magnetospira sp. QH-2;t__ 0 0 0 0 0 0 0 621 621 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces kanamyceticus;t__ 1 0 8 0 6 517 0 193511 194045 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Eggerthellales;f__Eggerthellaceae;g__;s__Eggerthellaceae bacterium AT8;t__ 15 0 0 0 0 0 0 41767 41782 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb49virus;s__Escherichia virus JSE;t__Escherichia phage JSE 0 0 0 0 0 1003 0 2325 3328 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage BCD7;t__ 0 0 0 0 0 0 0 1876 1876 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces atroolivaceus;t__ 1 0 4 0 1 280 0 163840 164126 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. CNT360;t__ 0 0 0 0 0 66 0 154057 154123 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Lymphocryptovirus;s__Macacine gammaherpesvirus 4;t__ 0 0 0 0 0 0 0 3421 3421 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseofuscus;t__ 0 0 4 0 2 607 0 177850 178463 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Orgi virus;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Escherichia virus HK578;t__Escherichia phage HK578 0 0 0 0 0 29 0 845 874 k__Viruses;p__unclassified viruses;c__Tanay virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 191 191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium mangrovi;t__ 8 0 0 0 7 51 0 88158 88224 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Actinomadura;s__Actinomadura rifamycini;t__Actinomadura rifamycini DSM 43936 0 0 6 5 10 8 0 167529 167558 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus JG024;t__Pseudomonas phage JG024 0 0 0 0 0 907 0 418 1325 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Betafusellovirus;s__Acidianus spindle-shaped virus 1;t__ 0 0 0 0 0 0 0 483 483 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 4;t__ 0 0 0 0 0 0 0 234 234 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Uganda virus;t__Sweet potato leaf curl Uganda virus-[Uganda:Kampala:2008] 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Sosuga rubulavirus;t__Sosuga virus 0 0 0 0 0 0 0 309 309 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 5;t__Helicoverpa armigera densovirus 0 0 0 0 0 0 0 98 98 k__Viruses;p__dsDNA viruses, no RNA stage;c__Globuloviridae;o__;f__;g__Globulovirus;s__Pyrobaculum spherical virus;t__ 0 0 0 0 0 0 0 566 566 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage PLE2;t__ 0 0 0 0 0 4 0 697 701 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Pseudomonas phage PA11;t__ 0 1 0 0 0 0 0 991 992 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 11;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Carnation Italian ringspot virus;t__ 0 0 0 0 0 1 0 94 95 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Simian immunodeficiency virus;t__ 0 0 0 0 0 0 0 192 192 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Curtobacterium;s__Curtobacterium sp. Leaf261;t__ 12 0 3 0 74 25 0 78388 78502 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Fishburnevirus;s__Mycobacterium virus Brusacoram;t__Mycobacterium phage Brusacoram 0 0 0 2 187 368 0 395 952 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium septicum;t__Mycobacterium septicum DSM 44393 0 0 1 2 0 483 0 136660 137146 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Microlunatus;s__Microlunatus phosphovorus;t__Microlunatus phosphovorus NM-1 0 0 3 0 1 0 0 113658 113662 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage VvAW1;t__ 0 0 0 0 0 0 0 773 773 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces avermitilis;t__Streptomyces avermitilis MA-4680 = NBRC 14893 2 0 4 0 0 479 0 206753 207238 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces prasinopilosus;t__ 1 0 6 0 3 631 0 125539 126180 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Varicellovirus;s__Suid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 2869 2869 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces paucisporeus;t__ 0 0 9 0 8 163 0 162843 163023 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia asteroides;t__Nocardia asteroides NBRC 15531 0 0 8 17 11 291 0 138698 139025 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage MPK7;t__ 0 0 0 0 2 368 0 487 857 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Knoellia;s__Knoellia subterranea;t__Knoellia subterranea KCTC 19937 0 0 25 55 134 81 0 70967 71262 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces resistomycificus;t__ 2 0 19 0 0 1364 0 177219 178604 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Synechococcus phage metaG-MbCM1;t__ 0 0 0 0 0 0 0 3457 3457 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Luffa yellow mosaic virus;t__ 0 0 0 0 0 0 0 107 107 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__;s__Streptomycetaceae bacterium MP113-05;t__ 0 0 7 0 76 0 0 112584 112667 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 65;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage DL64;t__ 0 0 0 0 171 0 0 1276 1447 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acetobacter;s__Acetobacter senegalensis;t__ 0 0 0 0 9 1 0 1464 1600 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Ralstonia;s__Ralstonia pickettii;t__Ralstonia pickettii 12J 0 0 0 0 0 0 0 1617 1618 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Citrivirus;s__Citrus leaf blotch virus;t__ 0 0 0 0 0 0 0 174 174 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halorhabdus;s__Halorhabdus tiamatea;t__Halorhabdus tiamatea SARL4B 0 0 1 0 2 0 0 56312 56315 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Eiauvirus;s__Edwardsiella virus eiAU;t__Edwardsiella phage eiAU 0 0 0 0 0 0 0 860 860 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H9N2 subtype 0 0 0 0 0 0 2 255 257 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Salinispora;s__Salinispora arenicola;t__Salinispora arenicola CNS-205 0 0 14 0 74 269 0 115370 115727 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage phiEa2809;t__ 0 0 0 0 0 0 0 3243 3243 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Actinomycetospora;s__Actinomycetospora chiangmaiensis;t__Actinomycetospora chiangmaiensis DSM 45062 0 0 4 0 13 0 0 117109 117126 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Synechococcus phage S-CBP2;t__ 0 0 0 0 0 0 0 924 924 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albulus;t__ 1 0 31 0 10 758 0 186405 187205 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium vanbaalenii;t__Mycobacterium vanbaalenii PYR-1 0 0 1 2 0 939 0 128895 129837 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium;s__Agrobacterium arsenijevicii;t__ 0 0 0 0 0 0 0 4103 5006 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermatophilaceae;g__Mobilicoccus;s__Mobilicoccus pelagius;t__Mobilicoccus pelagius NBRC 104925 0 0 21 48 0 0 0 70642 70711 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Thermomonosporaceae;g__Actinomadura;s__Actinomadura madurae;t__Actinomadura madurae LIID-AJ290 0 0 30 6 39 47 0 205774 205896 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HRTV-4;t__ 0 0 0 0 0 0 0 714 714 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia muridarum;t__Chlamydia muridarum str. Nigg 0 0 0 0 0 0 0 150 150 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. TAA040;t__ 0 0 8 0 5 84 0 105992 106089 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage MA12;t__ 0 0 0 0 403 16 0 405 824 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Stretch Lagoon orbivirus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 8;t__ 0 0 0 0 0 0 0 306 306 k__Viruses;p__dsDNA viruses, no RNA stage;c__Tectiviridae;o__;f__;g__Tectivirus;s__Bacillus virus Bam35;t__Bacillus phage Bam35c 0 0 0 0 0 4 0 294 298 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Oenococcus phage phiS11;t__ 0 0 0 0 0 402 0 522 924 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Bdellomicrovirus;s__Bdellovibrio virus MH2K;t__Bdellovibrio phage phiMH2K 0 0 0 0 0 0 0 91 91 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseoplanus;t__ 0 0 18 0 51 108 0 163056 163234 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Sandfly fever Naples phlebovirus;t__Sandfly fever Naples virus 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Weissella phage phiYS61;t__ 0 0 0 0 0 0 0 671 671 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak IM virus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Enterobacteria phage P4;t__ 0 0 0 0 0 0 0 232 232 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis methanolica;t__Amycolatopsis methanolica 239 0 2 21 0 135 28 0 144561 144747 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Demequinaceae;g__Lysinimicrobium;s__Lysinimicrobium mangrovi;t__ 1 0 10 9 0 0 0 59274 59294 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Phaseolus vulgaris alphaendornavirus 1;t__ 0 0 0 0 0 0 0 278 278 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Porphyrobacter;s__Porphyrobacter sp. AAP82;t__ 0 0 1 1 25 0 0 57853 57880 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Mirabilis mosaic virus;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Jugra virus;t__ 0 0 0 0 0 0 0 203 203 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas astaxanthinifaciens;t__Sphingomonas astaxanthinifaciens DSM 22298 0 1 2 3 5 15 0 50631 50657 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. TAA204;t__ 0 0 3 0 3 60 0 131478 131544 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Gammacoronavirus;s__Beluga Whale coronavirus SW1;t__ 0 0 0 0 0 0 0 633 633 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia mikamii;t__Nocardia mikamii NBRC 108933 0 0 4 12 9 34 0 151117 151176 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus albus;t__Streptacidiphilus albus JL83 6 0 100 0 291 46 0 197858 198301 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces alboflavus;t__ 0 0 2 0 0 307 0 193714 194023 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halarchaeum;s__Halarchaeum acidiphilum;t__Halarchaeum acidiphilum MH1-52-1 0 0 10 2 1 0 0 52257 52270 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Alphapartitivirus;s__White clover cryptic virus 1;t__ 0 0 0 0 0 0 0 71 71 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. C448;t__ 3 0 64 0 109 57 0 64279 64512 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__;s__Tupaiid betaherpesvirus 1;t__ 0 0 0 0 0 0 0 3917 3917 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage Andromeda;t__ 0 0 0 0 3 0 0 797 800 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 27;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Snake atadenovirus A;t__Snake adenovirus 1 0 0 0 0 0 0 0 555 555 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage phi80;t__ 0 0 0 1 1 156 0 764 922 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Schwabeltier;t__ 0 0 0 0 0 17 0 920 937 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola;s__Marmoricola sp. URHB0036;t__ 0 0 7 1 17 0 0 96524 96549 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces sp. oral taxon 448;t__Actinomyces sp. oral taxon 448 str. F0400 0 0 1 0 1 1 0 55893 55896 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Kribbella;s__Kribbella flavida;t__Kribbella flavida DSM 17836 0 0 12 0 4 0 0 151573 151589 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium hubeiense;t__ 0 0 1 0 0 4 0 12093 12391 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__;s__Corynebacterium-like bacterium B27;t__ 35 0 47 1 0 0 0 82486 82569 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Actinopolymorpha;s__Actinopolymorpha alba;t__Actinopolymorpha alba DSM 45243 0 0 2 0 0 0 0 159333 159335 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia shandongensis;t__Gordonia shandongensis DSM 45094 0 0 2 13 0 171 0 66347 66533 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alkaliphila;t__ 9 0 5 0 0 0 0 151029 151043 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Omsk hemorrhagic fever virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Benyviridae;g__Benyvirus;s__Burdock mottle virus;t__ 0 0 0 0 0 0 0 225 225 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Tsukamurellaceae;g__Tsukamurella;s__Tsukamurella paurometabola;t__Tsukamurella paurometabola DSM 20162 0 0 0 0 0 0 0 1838 1996 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wenzhou Crab Virus 3;t__ 0 0 0 0 0 0 0 257 257 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Xinzhou spider virus 2;t__ 0 0 0 0 0 0 0 490 490 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Humibacter;s__Humibacter albus;t__Humibacter albus DSM 18994 0 0 2 9 38 0 0 73777 73826 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides halotolerans;t__Nocardioides halotolerans DSM 19273 0 0 9 1 0 12 0 96952 96974 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora cyanea;t__Saccharomonospora cyanea NA-134 0 0 11 0 107 605 0 107427 108150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Vibrio phage pYD21-A;t__ 0 0 0 0 0 0 0 938 938 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium vaccae;t__Mycobacterium vaccae 95051 0 0 0 0 0 68 0 124647 124715 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium oleivorans;t__Microbacterium oleivorans NBRC 103075 0 0 0 0 6 0 0 59477 59483 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Freesia mosaic virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Coltivirus;s__Colorado tick fever virus;t__ 0 0 0 0 0 0 0 563 563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium virus Tweety;t__Mycobacterium phage Tweety 0 0 0 0 298 203 0 672 1173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Hamulus;t__ 0 0 0 0 127 250 0 766 1143 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Porcine associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 19 0 0 0 0 0 0 0 46 46 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces cellulosae;t__ 2 0 4 0 1 1232 0 199679 200918 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kp36virus;s__Klebsiella virus KLPN1;t__Klebsiella phage KLPN1 0 0 0 0 0 86 0 894 980 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Mardivirus;s__Gallid alphaherpesvirus 3;t__ 0 0 0 0 0 0 0 3285 3285 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage GG32;t__ 0 0 0 0 2076 0 0 1081 3157 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 57 57 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium efficiens;t__Corynebacterium efficiens YS-314 0 0 6 7 0 124 0 62804 62941 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 19;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pipefishvirus;s__Mycobacterium phage Akoma;t__ 0 0 0 0 705 487 0 182 1374 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Sindbis virus;t__ 0 0 0 0 0 0 0 234 234 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pocjvirus;s__Shigella virus 7502Stx;t__Shigella phage 75/02 Stx 1 0 0 12 623 375 0 184 1217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Adler;t__ 0 0 0 0 0 0 0 1914 1914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Gordtnkvirus;s__Gordonia virus GordTnk2;t__Gordonia phage GordTnk2 0 0 0 0 529 0 0 990 1519 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 6;t__ 0 0 0 0 0 0 0 276 276 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Weissella phage WCP30;t__ 0 0 0 0 0 0 0 673 673 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp. SYK-6;t__ 0 0 0 0 0 31 0 1107 2976 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Phycicoccus;s__Phycicoccus sp. Soil803;t__ 15 0 16 33 20 8 0 89171 89263 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage vB_EcoM_PhAPEC2;t__ 0 0 0 0 609 9 0 2728 3346 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Grapevine vein-clearing virus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__Alphasphaerolipovirus;s__Haloarcula hispanica virus PH1;t__ 0 0 0 0 0 3 0 558 561 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage PS-1;t__ 0 0 0 0 0 0 0 973 973 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus B;t__Bat adenovirus 2 0 0 0 0 0 0 0 632 632 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. NRRL F-5053;t__ 0 0 4 0 0 111 0 176088 176203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Carcharodon;t__ 0 0 0 0 484 94 0 295 873 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Shigella virus Shfl1;t__ 0 0 0 0 0 12 0 1001 1013 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. B19;t__ 26 0 4 0 9 169 0 71742 71950 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Escherichia virus Lambda;t__ 0 0 0 27 0 26 0 917 970 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HGTV-1;t__ 0 0 0 0 0 0 0 2877 2877 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P70virus;s__Listeria virus LP26;t__Listeria phage LP-026 0 0 0 0 0 1038 0 304 1342 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__Olsenella profusa;t__Olsenella profusa F0195 0 0 0 1 6 7 0 54344 54358 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Escherichia phage slur16;t__ 0 0 0 0 862 0 0 1875 2737 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phicbkvirus;s__Caulobacter virus Magneto;t__ 0 0 0 0 0 2426 0 1952 4378 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Xanthobacter;s__Xanthobacter autotrophicus;t__Xanthobacter autotrophicus Py2 0 0 0 0 0 0 0 6132 6323 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Middle East respiratory syndrome-related coronavirus;t__ 0 0 0 0 0 0 0 602 602 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Solirubrobacter;s__Solirubrobacter soli;t__Solirubrobacter soli DSM 22325 1 0 0 5 0 0 0 186124 186130 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Alphapleolipovirus;s__Haloarcula virus HHPV-1;t__Haloarcula hispanica pleomorphic virus 1 0 0 0 0 0 0 0 161 161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage VpV262;t__ 0 0 0 0 0 0 0 920 920 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella hongkongensis;t__Loktanella hongkongensis DSM 17492 0 0 0 0 0 0 0 3771 3772 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Delftia phage RG-2014;t__ 0 0 0 0 0 0 0 1477 1477 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Escherichia virus HK97;t__ 0 0 0 0 0 0 0 794 794 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Stenotrophomonas phage vB_SmaS-DLP;t__Stenotrophomonas phage vB_SmaS-DLP_2 0 0 0 0 216 0 0 635 851 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Wad Medani virus;t__ 0 0 0 0 0 0 0 341 341 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage VT2phi_272;t__ 0 0 0 28 595 291 0 405 1319 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. URHB0044;t__ 0 0 1 2 0 47 0 149532 149582 k__Bacteria;p__Actinobacteria;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Olsenella;s__Olsenella sp. oral taxon 809;t__Olsenella sp. oral taxon 809 str. F0356 0 0 1 5 5 14 0 43138 43163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Leporid alphaherpesvirus 4;t__ 0 0 0 0 0 0 0 2480 2480 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Staphylococcus phage SLPW;t__ 0 0 0 0 13 35 0 309 357 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Cyanophage P-SSP2;t__ 0 0 0 2 0 0 0 915 917 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces nodosus;t__ 1 0 11 0 6 709 0 153158 153885 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella virus Shfl2;t__Shigella phage Shfl2 0 0 0 0 406 1373 0 1539 3318 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Woesvirus;s__Gordonia virus Monty;t__Gordonia phage Monty 0 0 0 0 0 778 0 735 1513 k__Viruses;p__unclassified bacterial viruses;c__Pseudoalteromonas phage BS5;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 798 798 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter lovleyi;t__Geobacter lovleyi SZ 0 0 0 0 0 0 0 1542 1542 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P70virus;s__Listeria virus LP37;t__Listeria phage LP-037 0 0 0 0 0 801 0 494 1295 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces roseochromogenus;t__Streptomyces roseochromogenus subsp. oscitans 4 0 20 0 2 1419 0 186333 187778 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage SPN19;t__ 0 0 0 0 0 0 0 1184 1184 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Tyuleniy virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rogue1virus;s__Escherichia virus Rogue1;t__Enterobacteria phage vB_EcoS_Rogue1 0 0 0 0 0 460 0 456 916 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Altererythrobacter;s__Altererythrobacter atlanticus;t__ 0 0 0 0 0 0 0 1776 1776 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Halocynthia phage JM-2012;t__ 0 0 0 0 0 0 0 3345 3345 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Bidens mottle virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Acinetobacter phage vB_AbaS_TRS1;t__ 0 0 0 11 0 0 0 803 814 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Thermus phage phi OH2;t__ 0 0 0 0 0 0 0 761 761 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces massiliensis;t__Actinomyces massiliensis 4401292 22 0 2 0 4 200 0 66679 66907 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__M12virus;s__Sinorhizobium virus N3;t__Sinorhizobium phage phiN3 0 0 0 0 0 0 0 4134 4134 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes utahensis;t__ 0 0 12 0 12 104 0 189407 189535 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp. Root930;t__ 18 0 10 7 4 61 0 84843 84943 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Williamsiaceae;g__Williamsia;s__Williamsia herbipolensis;t__ 0 0 2 38 0 22 0 94736 94808 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Murine mastadenovirus C;t__Murine adenovirus 3 0 0 0 0 0 0 0 611 611 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HVTV-1;t__ 0 0 0 0 0 214 0 1832 2046 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Hedgehog coronavirus 1;t__Betacoronavirus Erinaceus/VMC/DEU/2012 0 0 0 0 0 0 0 603 603 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp. NT-26;t__ 0 0 1 0 0 0 0 6652 6752 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Breeniome 0 0 0 0 123 35 2843 87 3088 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. FB24;t__ 0 0 0 0 3 0 0 7392 7427 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter sp. PH1c;t__ 0 0 2 2 7 46 0 62268 62325 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 8;t__ 0 0 0 0 0 0 0 247 247 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces pristinaespiralis;t__ 2 0 36 0 6 894 0 169713 170651 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens;t__Blastococcus saxobsidens DD2 0 0 28 0 49 0 0 97429 97506 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage SPN3UB;t__ 0 0 0 2 0 96 0 849 947 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus Marshall;t__Salmonella phage Marshall 0 0 0 0 11 938 0 2177 3126 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Papaya lethal yellowing virus;t__ 0 0 0 0 0 0 0 82 82 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Verminephrobacter;s__Verminephrobacter eiseniae;t__Verminephrobacter eiseniae EF01-2 0 0 0 0 0 0 0 620 623 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia rhizosphera;t__Gordonia rhizosphera NBRC 16068 0 0 2 31 0 47 0 128115 128195 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia malaquae;t__Gordonia malaquae NBRC 108250 0 0 24 176 0 869 0 88000 89095 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Gulosibacter;s__Gulosibacter molinativorax;t__Gulosibacter molinativorax DSM 13485 0 0 3 49 21 0 0 67347 67420 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Hyperthermophilic Archaeal Virus 1;t__ 0 0 0 0 0 0 0 454 454 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Hamadaea;s__Hamadaea tsunoensis;t__Hamadaea tsunoensis DSM 44101 0 0 19 0 18 0 0 189391 189428 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Citrobacter phage SH2;t__ 0 0 0 0 0 155 0 628 783 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pomovirus;s__Beet virus Q;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Idiomarinaceae phage Phi1M2-2;t__ 0 0 0 0 0 0 0 736 736 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 6;t__ 0 0 0 0 0 0 0 100 100 k__BacteriaPlasmid;p__Synergistetes;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Thermovirga;s__Thermovirga lienii;t__Thermovirga lienii DSM 17291 0 0 0 0 0 0 0 568 637 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__SARS-related coronavirus;t__SARS coronavirus 0 0 0 0 0 0 0 595 595 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Arsenicicoccus;s__Arsenicicoccus bolidensis;t__Arsenicicoccus bolidensis DSM 15745 1 1 9 14 1 129 0 79592 79747 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces zinciresistens;t__Streptomyces zinciresistens K42 0 0 5 0 3 1153 0 162284 163445 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Figwort mosaic virus;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai paphia shell virus 2;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Listeria phage P40;t__ 0 0 0 0 0 0 0 712 712 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Grapevine rootstock stem lesion associated virus;t__ 0 0 0 0 0 0 0 330 330 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria flava;t__ 0 0 0 0 0 0 0 2632 2674 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus melanogenes;t__ 0 0 20 0 118 246 0 173576 173960 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium atypicum;t__ 0 0 0 0 0 0 0 0 961 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium kansasii;t__Mycobacterium kansasii ATCC 12478 0 0 0 0 0 0 0 237 2899 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Brazoran virus;t__ 0 0 0 0 0 0 0 261 261 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__Bacillarnavirus;s__Rhizosolenia setigera RNA virus 01;t__ 0 0 0 0 0 0 0 177 177 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus fascians;t__Rhodococcus fascians D188 0 0 0 0 0 0 0 3151 7240 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Fredward;t__ 0 0 0 0 0 0 0 1045 1045 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Escherichia phage HK75;t__ 0 0 0 35 18 400 0 280 733 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora azatica;t__Kitasatospora azatica KCTC 9699 0 0 238 0 459 59 0 164686 165442 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 101;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Onion yellow dwarf virus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kp36virus;s__Klebsiella virus PKP126;t__Klebsiella phage PKP126 0 0 0 0 0 24 0 994 1018 k__Viruses;p__unclassified archaeal viruses;c__Aeropyrum pernix spindle-shaped virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 760 760 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage 38;t__ 0 0 0 0 916 0 0 2220 3136 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Euphorbia caput-medusae latent virus;t__ 0 0 0 0 0 0 0 53 53 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. Root135;t__ 0 0 2 4 0 45 0 129952 130003 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Tenuivirus;s__Rice stripe tenuivirus;t__ 0 0 0 0 0 0 0 336 336 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL311;t__ 0 0 0 0 0 4 0 286 290 k__Viruses;p__unassigned viruses;c__Megabirnaviridae;o__;f__;g__Megabirnavirus;s__Rosellinia necatrix megabirnavirus 1;t__Rosellinia necatrix megabirnavirus 1/W779 0 0 0 0 0 0 0 320 320 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage douglas 12A4;t__ 0 0 0 0 0 0 0 1152 1152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage P162;t__ 0 0 0 0 0 0 0 1111 1111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus phage phi jlb1;t__ 16 0 0 0 0 155 0 594 765 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage JCL1032;t__ 0 0 0 0 0 0 0 988 988 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobus monocaudavirus SMV4;t__ 0 0 0 0 0 2 0 1002 1004 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Epsilonretrovirus;s__Walleye dermal sarcoma virus;t__ 0 0 0 0 0 0 0 254 254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Salmonella virus FelixO1;t__Salmonella phage FelixO1 0 0 0 0 0 0 0 1723 1723 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus phage phiAQ113;t__ 0 0 0 0 0 0 0 731 731 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Lactobacillus virus LP65;t__ 0 0 0 0 0 0 0 2629 2629 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Escherichia virus PhaxI;t__Escherichia phage PhaxI 0 0 0 0 0 1 0 3131 3132 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Burana orthonairovirus;t__Tacheng Tick Virus 1 0 0 0 0 0 0 0 379 379 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Gmala1;t__ 0 0 0 0 171 275 0 1057 1503 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage K5;t__ 0 0 0 0 1285 586 0 4 1875 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Milk vetch dwarf C10 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. SAT1;t__ 0 0 11 0 0 567 0 148872 149450 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus B;t__Simian adenovirus 49 0 0 0 0 0 0 0 709 709 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus brockianus;t__ 0 0 0 0 0 0 0 6983 7060 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage PAK_P2;t__ 0 0 0 0 1279 45 0 525 1849 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 1;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage QH;t__ 0 0 0 0 268 0 0 526 794 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P70virus;s__Listeria virus P70;t__Listeria phage P70 0 0 0 0 0 0 0 1343 1343 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 10;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Acinetobacter phage Petty;t__ 0 0 0 0 0 0 0 814 814 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__RD114 retrovirus;t__ 0 0 0 0 0 0 0 168 168 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. Root61;t__ 0 0 1 0 7 90 0 80352 80450 k__Viruses;p__unclassified bacterial viruses;c__Flavobacterium phage 1H;o__;f__;g__;s__;t__ 0 578 0 0 0 0 0 207 785 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__K1gvirus;s__Escherichia virus K1H;t__Escherichia phage K1-dep(1) 0 0 0 0 1 240 0 591 832 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage vB_SauS_phi2;t__ 0 0 0 0 307 100 0 477 884 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bdellovibrio phage phi1402;t__ 0 0 0 0 0 0 0 478 478 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Smoothievirus;s__Gordonia virus Smoothie;t__Gordonia phage Smoothie 0 0 0 0 221 1032 0 609 1862 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 8;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cyanophage P-RSM1;t__ 0 0 0 0 0 0 0 3544 3544 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__;s__Caulobacteraceae bacterium PMMR1;t__ 0 0 2 0 9 0 0 53457 53468 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Arboretum virus;t__ 0 0 0 0 0 0 0 229 229 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter phenanthrenivorans;t__Pseudarthrobacter phenanthrenivorans Sphe3 0 0 0 0 0 0 0 5168 5696 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang sobemo-like virus 1;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Lettuce italian necrotic virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Salisaeta icosahedral phage 1;t__ 0 0 0 0 0 0 0 875 875 k__Viruses;p__Virus families not assigned to an order;c__Botybirnavirus;o__;f__;g__;s__Sclerotinia sclerotiorum botybirnavirus 1;t__ 0 0 0 0 0 0 0 246 246 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria polaris;t__ 3 0 4 5 5 200 0 75255 75472 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Ralstonia phage RSJ2;t__ 0 0 0 0 0 1 0 886 887 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Root79;t__ 1 0 9 0 42 86 0 102216 102354 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 113;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Deltapolyomavirus;s__Human polyomavirus 7;t__ 0 0 0 0 0 0 0 99 99 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea candida;t__ 0 0 10 2 23 125 0 219510 219670 k__Archaea;p__Crenarchaeota;c__Thermoprotei;o__Desulfurococcales;f__Pyrodictiaceae;g__Pyrodictium;s__Pyrodictium occultum;t__ 0 0 0 0 0 0 0 32432 32432 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage Claudi;t__ 0 0 0 0 0 0 0 530 530 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Brocalys;t__ 0 0 0 0 315 413 0 367 1095 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Enterobacteria phage fiAA91-ss;t__ 0 0 0 0 0 74 0 598 672 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Citrus variegation virus;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unclassified viruses;c__Big Cypress virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Megrivirus;s__Chicken megrivirus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Melon severe mosaic tospovirus;t__ 0 0 0 0 0 0 0 336 336 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus SJ3;t__Salmonella phage vB_SalM_SJ3 0 0 0 0 589 1056 0 1588 3233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Phikzvirus;s__Pseudomonas phage PhiPA3;t__ 0 0 0 0 0 0 0 6184 6184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Wphvirus;s__Bacillus virus BPS13;t__Bacillus phage BPS13 0 0 0 0 1 0 0 3165 3166 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter celer;t__Leucobacter celer subsp. astrifaciens 1 0 2 0 0 0 0 82371 82374 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus G;t__Simian adenovirus 1 0 0 0 0 0 0 0 688 688 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces slackii;t__Actinomyces slackii ATCC 49928 0 0 4 0 0 0 0 63176 63180 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Diascia yellow mottle virus;t__ 0 0 0 0 0 0 0 125 125 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Tessaracoccus;s__Tessaracoccus massiliensis;t__ 1 0 221 0 12 0 0 63952 64186 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces cardiffensis;t__Actinomyces cardiffensis F0333 0 0 15 0 1 7 0 43663 43686 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia rubra;t__ 0 0 0 0 15 2 0 73151 73168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage 933W sensu lato;t__Enterobacteria phage VT2-Sakai 0 0 0 6 863 0 0 328 1197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Nona33virus;s__Escherichia virus Stx2 II;t__Escherichia phage Stx2 II 0 0 0 27 273 946 0 8 1254 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Intrasporangium;s__Intrasporangium chromatireducens;t__Intrasporangium chromatireducens Q5-1 0 0 67 119 7 5 0 94645 94843 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Avani;t__ 0 0 0 0 185 437 0 467 1089 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrinema;s__Natrinema pellirubrum;t__Natrinema pellirubrum DSM 15624 0 0 75 0 0 0 0 10361 11270 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Saetivirus;s__Vibrio virus VFJ;t__Vibrio phage VFJ 0 0 0 0 0 52 0 119 171 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 14;t__ 0 0 0 0 0 0 0 83 83 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces lydicus;t__ 0 0 22 0 5 366 0 162984 163377 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Pseudoclavibacter;s__Pseudoclavibacter faecalis;t__Zimmermannella faecalis ATCC 13722 0 0 1 21 11 0 0 56881 56914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage ST160;t__ 0 0 0 2 0 6 0 811 819 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Jabbawokkie;t__ 0 0 0 1 400 17 0 686 1104 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P23virus;s__Thermus phage P7426;t__ 0 0 0 0 0 0 0 1666 1666 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcep78virus;s__Burkholderia virus BcepNY3;t__ 0 0 0 0 0 606 0 341 947 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces avicenniae;t__ 0 0 6 0 3 54 0 129420 129483 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Actinidia virus B;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phijl1virus;s__Lactobacillus virus phiJL1;t__ 0 0 0 0 0 0 0 733 733 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Montana myotis leukoencephalitis virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0004;o__;f__;g__;s__;t__ 10 584 0 0 0 0 0 228 822 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Urucuri virus;t__ 0 0 0 0 0 0 0 254 254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Vibrio phage VBP47;t__ 0 0 0 0 0 0 0 1534 1534 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Cyanophage Syn30;t__ 0 0 0 0 0 0 0 3576 3576 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 4;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus A;t__Aichi virus 1 0 0 0 0 0 0 0 165 165 k__Viruses;p__unclassified archaeal viruses;c__Thermococcus prieurii virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 431 431 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 59;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Pineapple mealybug wilt-associated virus 1;t__ 0 0 0 0 0 0 0 261 261 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei lepidoptera virus 2;t__ 0 0 0 0 0 0 0 262 262 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Sugarcane bacilliform MO virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhizobium phage RR1-B;t__ 0 0 0 0 0 0 0 747 747 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Achimota rubulavirus 2;t__Achimota virus 2 0 0 0 0 0 0 0 310 310 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Erythrobacteraceae;g__Erythrobacter;s__Erythrobacter atlanticus;t__ 0 0 0 0 0 0 0 3784 4279 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 1;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__White-eye coronavirus HKU16;t__ 0 0 0 0 0 0 0 520 520 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEpX2;t__ 0 0 0 46 1 282 0 446 775 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 10;t__ 0 0 0 0 0 0 0 273 273 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Valsa ceratosperma hypovirus 1;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified virophages;c__Phaeocystis globosa virus virophage;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 390 390 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Paenarthrobacter;s__Paenarthrobacter aurescens;t__Paenarthrobacter aurescens TC1 0 0 0 0 0 0 0 12344 12577 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__Gammasphaerolipovirus;s__Thermus thermophilus phage IN93;t__ 0 0 0 0 0 0 0 392 392 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage SMP;t__ 0 0 0 0 0 0 0 720 720 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia dioxanivorans;t__Pseudonocardia dioxanivorans CB1190 0 0 17 0 0 28 0 141886 141931 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 2;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sapelovirus;s__Avian sapelovirus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Phytoreovirus;s__Homalodisca vitripennis reovirus;t__ 0 0 0 0 0 0 0 493 493 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Hibiscus bacilliform virus GD1;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Sepik virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage iEPS5;t__ 0 0 0 17 75 422 0 671 1185 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Grapevine deformation virus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 27;t__ 0 0 0 0 0 0 0 188 188 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces purpureus;t__Streptomyces purpureus KA281 0 0 57 0 6 974 0 148027 149064 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Amapar mammarenavirus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Mudcatvirus;s__Arthrobacter virus Mudcat;t__Arthrobacter phage Mudcat 0 0 0 0 0 0 0 1188 1188 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Ageratum latent virus;t__ 0 0 0 0 0 0 0 167 167 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Acidiphilium;s__Acidiphilium multivorum;t__Acidiphilium multivorum AIU301 0 0 0 0 0 0 0 8571 9293 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 3;t__Human papillomavirus type 49 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Ungulate bocaparvovirus 6;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Cucurbit chlorotic yellows virus;t__ 0 0 0 0 0 0 0 331 331 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus hoagii;t__Rhodococcus hoagii 103S 0 0 16 75 26 98 0 100648 100863 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Rice black streaked dwarf virus;t__ 0 0 0 0 0 0 0 565 565 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Soymovirus;s__Soybean chlorotic mottle virus;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__;s__Blueberry virus A;t__ 0 0 0 0 0 0 0 355 355 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe heteroptera virus 1;t__ 0 0 0 0 0 0 0 200 200 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium sp. DL1;t__ 415 0 81 0 0 0 0 5285 6311 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. GCS4;t__ 0 0 0 0 10 137 0 72899 73046 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Algerian watermelon mosaic virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 7;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Salmonella virus HB2014;t__Salmonella phage HB-2014 0 0 0 0 107 240 0 1403 1750 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage CHOED;t__ 0 0 0 0 0 0 0 1326 1326 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage DMS3;t__ 0 0 0 0 146 111 0 471 728 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus Maynard;t__Salmonella phage Maynard 0 0 0 0 14 2660 0 420 3094 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage vB_BhaS-171;t__ 0 0 0 0 0 0 0 779 779 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobales Virus YNP2;t__ 0 0 0 0 0 0 0 685 685 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 1;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Acinetobacter phage Acj61;t__ 0 0 0 0 0 0 0 3281 3281 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Privet ringsport virus;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Parapoxvirus;s__Orf virus;t__ 0 0 0 0 0 0 0 2799 2799 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Japanese encephalitis virus;t__ 0 0 0 0 0 0 0 219 219 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Hyphomonadaceae;g__Hirschia;s__Hirschia baltica;t__Hirschia baltica ATCC 49814 0 0 0 0 0 0 0 1689 1689 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus VA4;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shayang virga-like virus 1;t__ 0 0 0 0 0 0 0 247 247 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Taupapillomavirus;s__Taupapillomavirus 2;t__Canis familiaris papillomavirus 13 0 0 0 0 0 0 0 164 164 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Bat hepacivirus;t__ 0 0 0 0 0 0 0 184 184 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. No. 7;t__ 0 0 12 153 40 358 0 91417 91980 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus phiLdb;t__Lactobacillus phage phiLdb 0 0 0 0 0 11 0 668 679 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Js98virus;s__Escherichia virus IME08;t__Enterobacteria phage IME08 0 0 0 0 1 66 0 3378 3445 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 1;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage VCM;t__ 0 0 0 0 0 0 0 1975 1975 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Enzootic nasal tumour virus of goats;t__ 0 0 0 0 0 1 0 147 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Brazilian weed virus Y;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Salmonella virus 118970sal2;t__Salmonella phage 100268_sal2 0 0 0 0 8 467 0 2027 2502 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Alpaca polyomavirus;t__ 0 0 0 0 0 0 0 101 101 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Planococcaceae;g__Planococcus;s__Planococcus kocurii;t__ 0 0 0 0 0 0 0 270 270 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bovine mastadenovirus A;t__ 0 0 0 0 0 0 0 683 683 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Yellow fever virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Prune dwarf virus;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Acidianus filamentous virus 7;t__ 0 0 0 0 0 5 0 732 737 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Ovine mastadenovirus A;t__Bovine adenovirus 2 0 0 0 0 0 0 660 0 660 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Ovine mastadenovirus A;t__ 0 0 0 0 0 0 0 660 660 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 36;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Primate T-lymphotropic virus 1;t__Simian T-lymphotropic virus 1 0 0 0 0 0 0 0 180 180 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage wV7;t__ 0 0 0 0 68 2341 0 920 3329 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 53;t__ 0 0 0 0 0 0 0 267 267 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 5;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spirurian nematodes virus 1;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Papaya leaf curl betasatellite;t__ 0 0 0 0 0 5 0 22 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cp51virus;s__Bacillus virus JL;t__Bacillus phage JL 0 0 0 0 0 30 0 2728 2758 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__;g__;s__Fisavirus 1;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe endorna-like virus 1;t__ 0 0 0 0 0 0 0 315 315 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Shuangao Bedbug Virus 2;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Cavemovirus;s__Cassava vein mosaic virus;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Togo betasatellite-[Togo:2006];t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Vibrio phage VBM1;t__ 0 0 0 0 0 0 0 767 767 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 4;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Soymovirus;s__Cestrum yellow leaf curling virus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Demosthenesvirus;s__Gordonia virus Kvothe;t__Gordonia phage Kvothe 0 0 0 0 0 0 0 1509 1509 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato yellow leaf curl China betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-47;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wuhan aphid virus 2;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum yellow vein India alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Cowpea chlorotic mottle virus;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Robigovirus;s__Cherry twisted leaf associated virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 48;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 5;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus prophage Lj928;t__ 0 0 0 0 0 0 0 767 767 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus virus bIL67;t__ 0 0 0 0 0 0 0 443 443 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN12;t__ 0 0 0 0 0 161 0 402 563 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus JH2;t__Escherichia phage JH2 0 0 0 0 0 0 0 1754 1754 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Anhanga virus;t__ 0 0 0 0 0 0 0 247 247 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Furovirus;s__Chinese wheat mosaic virus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Nitrincola phage 1M3-16;t__ 0 0 0 0 0 0 0 1648 1648 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 9;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 33;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ampullaviridae;o__;f__;g__Ampullavirus;s__Acidianus bottle-shaped virus 3;t__ 0 0 0 0 0 0 0 569 569 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Primate T-lymphotropic virus 3;t__Simian T-lymphotropic virus 3 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Penaeid shrimp infectious myonecrosis virus;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Stx2-converting phage 1717;t__ 0 0 0 209 0 28 0 1005 1242 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Escherichia phage slur02;t__ 0 0 0 0 99 1379 0 1867 3345 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phijl1virus;s__Lactobacillus virus ATCC8014;t__ 0 0 0 0 0 0 0 760 760 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Yuavirus;s__Pseudomonas phage M6;t__ 0 0 0 0 0 0 0 1188 1188 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Burkholderia phage BcepB1A;t__ 0 0 0 0 0 0 0 947 947 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium sp. Root495;t__ 0 0 7 0 7 35 0 71352 71401 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Guanarito mammarenavirus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Papez;t__ 0 0 0 0 234 368 0 448 1050 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Mycoplasma virus P1;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage PMC;t__ 0 0 0 0 100 0 0 1033 1133 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus larvae;t__Paenibacillus larvae subsp. larvae 0 0 0 0 0 0 0 193 193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage Ln-9;t__ 0 0 0 0 0 44 0 526 570 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 120;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Machupo mammarenavirus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Shigella phage SHFML-11;t__ 0 0 0 0 71 1536 0 1805 3412 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tomato black ring virus satellite RNA;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Omegavirus;s__Mycobacterium phage Omega;t__ 0 0 0 0 27 0 0 2190 2217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Muvirus;s__Escherichia phage D108;t__ 0 0 0 0 0 0 0 744 744 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Tospovirus kiwifruit/YXW/2014;t__ 0 0 0 0 0 0 0 329 329 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Yaounde virus;t__ 0 0 0 0 0 0 0 205 205 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora lupini;t__Micromonospora lupini str. Lupac 08 0 0 20 0 125 119 0 146067 146331 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Smoothievirus;s__Gordonia virus OneUp;t__Gordonia phage OneUp 0 0 0 0 0 0 0 1871 1871 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL067M10;t__ 0 0 0 0 85 0 0 502 587 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Datura yellow vein nucleorhabdovirus;t__ 0 0 0 0 0 0 0 263 263 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__T4virus;s__Enterobacteria phage RB51;t__ 0 0 0 0 11 0 0 3356 3367 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Anabaena phage A-4L;t__ 0 0 0 0 0 0 0 834 834 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 13;t__ 0 0 0 0 2 0 0 157 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou bivalvia virus 1;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcep78virus;s__Burkholderia virus Bcep43;t__ 0 0 0 0 0 639 0 321 960 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus Ld25A;t__Lactobacillus phage Ld25A 0 0 0 0 0 87 0 568 655 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Dugbe orthonairovirus;t__ 0 0 0 0 0 0 0 373 373 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cyanophage PSS2;t__ 0 0 0 0 0 0 0 2150 2150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hepe-like virus 10;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Entomobirnavirus;s__Drosophila x virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Erwinia virus Ea214;t__Erwinia phage phiEa104 0 0 0 0 0 0 823 868 1691 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chickpea chlorosis virus;t__Chickpea chlorosis virus-A 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Triatovirus;s__Black queen cell virus;t__ 0 0 0 0 0 0 0 170 170 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium radiotolerans;t__Methylobacterium radiotolerans JCM 2831 0 0 0 0 0 0 0 15985 16411 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 1;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Cyanophage SS120-1;t__ 0 0 0 0 0 0 0 939 939 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 4;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei leech virus 4;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly orbiculatusvirus;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Jaagsiekte sheep retrovirus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Saccharomyces cerevisiae virus L-BC (La);t__ 0 0 0 0 0 0 0 92 92 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Yonghaparkia;s__Yonghaparkia sp. Soil809;t__ 0 0 0 2 13 0 0 51765 51780 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus SU10;t__Escherichia phage vB_EcoP_SU10 0 0 0 0 0 312 0 1234 1546 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Tai Forest alphavirus;t__ 0 0 0 0 0 0 0 227 227 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halorhabdus;s__Halorhabdus tiamatea;t__Halorhabdus tiamatea SARL4B 0 0 1 0 0 0 0 6407 6607 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Rehmannia mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Cypovirus 5;t__ 0 0 0 0 0 0 0 480 480 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei noda-like virus 8;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Spinach latent virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang sobemo-like virus 2;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 92;t__ 0 0 0 0 46 715 0 87 848 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Aquabirnavirus;s__Infectious pancreatic necrosis virus;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Betalipothrixvirus;s__Acidianus filamentous virus 9;t__ 0 0 0 0 0 0 0 823 823 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 40;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 10;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Divavirus;s__Diuris virus B;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mosaic Bolivia virus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Tibet orbivirus;t__Fengkai orbivirus 0 0 0 0 0 0 0 366 366 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Clostridium phage phiMMP02;t__ 0 0 0 0 208 0 0 759 967 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Podovirus Lau218;t__ 0 0 0 0 0 0 0 785 785 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Visna/maedi virus;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Piscine myocarditis virus AL V-708;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 10;t__ 0 0 0 0 0 1 0 74 75 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus oshimai;t__Thermus oshimai JL-2 0 0 0 0 0 235 0 6258 6576 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Rabovirus A;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Arabidopsis halleri partitivirus 1;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Aphthovirus;s__Equine rhinitis A virus;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage Newman 0 0 0 0 0 546 0 825 1371 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Camelus dromedarius papillomavirus type 2;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Spanish goat encephalitis virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Marburgvirus;s__Marburg marburgvirus;t__ 0 0 0 0 0 0 0 382 382 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Barnyardvirus;s__Mycobacterium virus Barnyard;t__Mycobacterium phage Barnyard 0 0 0 0 0 0 0 1415 1415 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Xp10virus;s__Xanthomonas phage Xp10;t__ 0 0 0 0 0 0 0 887 887 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 4;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__European catfish virus;t__ 0 0 0 0 0 643 0 1911 2554 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Angelonia flower break virus;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 10;t__Avian paramyxovirus penguin/Falkland Islands/324/2007 0 0 0 0 0 0 0 309 309 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 10;t__Avian paramyxovirus penguin/Falkland Islands/324/2007 0 0 0 0 0 0 0 309 309 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paenibacillus phage Tripp;t__ 0 0 0 0 0 2 0 1086 1088 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Dante;t__ 0 0 0 0 406 308 0 479 1193 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus denitrificans;t__Paracoccus denitrificans PD1222 0 0 0 0 0 0 0 12916 13076 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Papaya ringspot virus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Maize rough dwarf fijivirus;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Small anellovirus;t__Small anellovirus 1 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyoxipapillomavirus;s__Dyoxipapillomavirus 1;t__Bos taurus papillomavirus 7 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus Bp4;t__Escherichia phage Bp4 0 0 0 0 0 0 0 1451 1451 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Tibetan frog hepadnavirus;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage bIL310;t__ 0 0 0 0 0 0 0 299 299 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Klebsiella phage 0507-KN2-1;t__ 0 0 0 0 0 0 0 3199 3199 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 83;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Wutai Mosquito Virus;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cotton leaf curl Multan betasatellite;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Leucas zeylanica yellow vein virus satellite DNA beta;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Phnom Penh bat virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Baboon orthoreovirus;t__ 0 0 0 0 0 0 0 432 432 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Vespertiliovirus;s__Spiroplasma virus R8A2B;t__Spiroplasma phage 1-R8A2B 0 0 0 0 0 0 0 165 165 k__BacteriaPlasmid;p__Bacteroidetes;c__Cytophagia;o__Cytophagales;f__Flammeovirgaceae;g__Marivirga;s__Marivirga tractuosa;t__Marivirga tractuosa DSM 4126 0 0 0 0 0 0 0 98 98 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus pyridinivorans;t__Rhodococcus pyridinivorans SB3094 0 0 0 0 0 0 0 7264 7265 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sea slater virus 4;t__ 0 0 0 0 0 0 0 249 249 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Atractylodes mild mottle virus;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 27;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Dracaena mottle virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Ebolavirus;s__Reston ebolavirus;t__ 0 0 0 0 0 0 0 377 377 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Spondweni virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Hosta virus X;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage phiCM3;t__ 0 0 0 0 0 87 0 688 775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Squirrel monkey polyomavirus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hp1virus;s__Haemophilus phage HP2;t__ 0 0 0 0 0 158 0 472 630 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus VA1;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Ungulate protoparvovirus 1;t__Porcine parvovirus 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Epsilonpapillomavirus;s__Epsilonpapillomavirus 1;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Butters;t__ 0 0 0 0 21 0 0 808 829 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__;s__Promicromonosporaceae bacterium W15;t__ 3 0 6 32 5 0 0 81314 81360 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Alphapleolipovirus;s__Haloarcula virus HHPV-2;t__Haloarcula hispanica pleomorphic virus 2 0 0 0 0 0 0 0 163 163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Cr3virus;s__Cronobacter virus CR8;t__Cronobacter phage CR8 0 0 0 0 0 0 0 2983 2983 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Xenopus laevis endogenous retrovirus Xen1;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Escherichia virus wV8;t__Escherichia phage wV8 0 0 0 0 0 116 0 1653 1769 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picobirna-like virus 8;t__ 0 0 0 0 0 0 0 67 67 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces parvulus;t__ 0 0 0 0 0 0 0 12317 12341 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Potato virus X;t__ 0 0 0 0 0 0 0 128 128 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Natrialbales;f__Natrialbaceae;g__Natrialba;s__Natrialba magadii;t__Natrialba magadii ATCC 43099 0 0 0 0 0 0 0 12592 13832 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Passion fruit woodiness virus;t__ 0 0 0 0 0 0 0 193 193 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium chlorophenolicum;t__Sphingobium chlorophenolicum L-1 0 0 0 0 6 0 0 685 2474 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jwxvirus;s__Achromobacter virus 83-24;t__Achromobacter phage 83-24 0 0 0 0 0 0 0 964 964 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. NRRL F-5126;t__ 0 0 6 0 0 90 0 143310 143406 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Escherichia phage Gluttony;t__ 0 0 0 0 38 0 0 852 890 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Rabbit coronavirus HKU14;t__ 0 0 0 0 0 2 0 619 621 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sprivivirus;s__Carp sprivivirus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shayang ascaridia galli virus 2;t__ 0 0 0 0 0 0 0 265 265 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pecluvirus;s__Peanut clump virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Shigella virus EP23;t__Shigella phage EP23 0 0 0 0 0 44 0 837 881 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Cyanophage KBS-P-1A;t__ 0 0 0 0 0 0 0 914 914 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Whitewater Arroyo mammarenavirus;t__ 0 0 0 0 0 0 0 207 207 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Janibacter;s__Janibacter sp. HTCC2649;t__ 0 0 36 40 75 0 0 84399 84550 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 19;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus B;t__Human adenovirus B2 0 0 0 0 0 0 412 283 695 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Murrumbidgee virus;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Little cherry virus 2;t__ 0 0 0 0 0 0 0 300 300 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rsl2virus;s__Ralstonia virus RSF1;t__Ralstonia phage RSF1 0 0 0 0 0 3 0 4454 4457 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Shuangao lacewing virus 2;t__ 0 0 0 0 0 0 0 371 371 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Astraea 0 0 0 2 114 61 2398 522 3097 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Methanothermobacter phage psiM100;t__ 0 0 0 0 0 49 0 571 620 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Escherichia virus ECML4;t__Escherichia phage ECML-4 0 0 0 0 21 1694 0 1431 3146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Murine mastadenovirus B;t__Murine adenovirus 2 0 0 0 0 0 0 0 704 704 k__Archaea;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__;g__Candidatus Halobonum;s__Candidatus Halobonum tyrrellensis;t__Candidatus Halobonum tyrrellensis G22 0 0 7 0 0 0 0 73355 73362 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 61;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Nora virus;t__ 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus SFP10;t__Salmonella phage SFP10 0 0 0 0 2 1118 0 2038 3158 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__Thermobispora;s__Thermobispora bispora;t__Thermobispora bispora DSM 43833 0 0 4 0 0 0 0 83795 83799 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Allpahuayo mammarenavirus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Artibeus jamaicensis parvovirus 1;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Lolly9;t__ 0 0 0 0 0 67 0 1449 1516 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Sulfitobacter phage phiCB2047-B;t__ 0 0 0 0 0 0 0 1489 1489 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agreia;s__Agreia bicolorata;t__ 0 0 0 0 1 0 0 78379 78380 k__Viruses;p__dsRNA viruses;c__Amalgaviridae;o__;f__;g__;s__Zygosaccharomyces bailii virus Z;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wuhan flea virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 4;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sweet potato virus 2;t__ 0 0 0 0 0 0 0 214 214 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio vulgaris;t__Desulfovibrio vulgaris str. Hildenborough 0 0 0 0 0 0 0 4046 4046 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Wallal virus;t__ 0 0 0 0 0 0 0 365 365 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Golden shiner totivirus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Septima3virus;s__Pseudomonas virus Kakheti25;t__Pseudomonas phage vB_Pae-Kakheti25 0 0 0 0 0 0 0 856 856 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Norwalk virus;t__Norovirus GIV 0 0 0 0 0 0 0 150 150 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__;s__Candidatus Baumannia cicadellinicola;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__European bat 2 lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage PaP2;t__ 0 0 0 0 0 0 0 875 875 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sap6virus;s__Enterococcus virus BC611;t__Enterococcus phage BC611 0 0 0 0 0 0 0 1079 1079 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Ambe virus;t__ 0 0 0 0 0 0 0 249 249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Burkholderia virus BcepF1;t__ 0 0 0 0 0 0 0 1448 1448 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__BtRf-AlphaCoV/HuB2013;t__ 0 0 0 0 0 0 0 552 552 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter cetorum;t__Helicobacter cetorum MIT 99-5656 0 0 0 0 0 0 0 209 282 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bastillevirus;s__Bacillus virus CAM003;t__Bacillus phage CAM003 0 0 0 0 694 783 0 1733 3210 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella parapertussis;t__Bordetella parapertussis Bpp5 0 0 0 0 0 0 0 243 243 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 4;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rogue1virus;s__Escherichia virus AHS24;t__Escherichia phage vB_EcoS_AHS24 0 0 0 0 0 0 0 928 928 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Mobuck virus;t__ 0 0 0 0 0 0 0 381 381 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 82;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Bacillus phage Waukesha92;t__ 0 0 0 0 0 0 0 912 912 k__Viruses;p__dsRNA viruses;c__Cystoviridae;o__;f__;g__;s__Pseudomonas phage phi2954;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage IME207;t__ 0 0 0 13 0 2 0 936 951 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage CP-T1;t__ 0 0 0 0 0 43 0 846 889 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter;s__Campylobacter hominis;t__Campylobacter hominis ATCC BAA-381 0 0 0 0 0 0 0 73 73 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Helicobacter;s__Helicobacter acinonychis;t__Helicobacter acinonychis str. Sheeba 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Sathuperi orthobunyavirus;t__ 0 0 0 0 0 0 0 237 237 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces clavuligerus;t__ 0 0 0 0 0 0 0 14141 14141 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Peach mosaic virus;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus IME11;t__Escherichia phage IME11 0 0 0 0 0 14 0 1437 1451 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 10;t__ 0 0 0 0 0 0 0 263 263 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__;s__Sulfolobales Mexican fusellovirus 1;t__ 0 0 0 0 0 0 0 296 296 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Ruaniaceae;g__Ruania;s__Ruania albidiflava;t__Ruania albidiflava DSM 18029 0 0 7 22 0 0 0 83360 83389 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Rudiviridae;g__Rudivirus;s__Sulfolobales Mexican rudivirus 1;t__ 0 0 0 0 0 0 0 548 548 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Cocal vesiculovirus;t__Cocal virus 0 0 0 0 0 0 0 220 220 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Tetrasphaera;s__Tetrasphaera japonica;t__Tetrasphaera japonica T1-X7 10 0 11 9 0 0 0 101522 101552 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-7;t__ 0 0 0 0 0 0 0 38 38 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albus;t__Streptomyces albus subsp. albus 22 0 21 0 8 255 0 138223 138532 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus suis;t__Streptococcus suis BM407 0 0 0 0 0 0 0 430 491 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Carnivore bocaparvovirus 3;t__Feline bocavirus 0 0 0 0 0 0 0 104 104 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Synechococcales;f__Synechococcaceae;g__Synechococcus;s__Synechococcus sp. PCC 6312;t__ 0 0 0 0 0 0 0 452 464 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 26;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Human polyomavirus 4;t__WU Polyomavirus 0 0 0 0 0 0 0 104 104 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Halobacteriaceae;g__Halobacterium;s__Halobacterium salinarum;t__Halobacterium salinarum R1 0 0 1 4 0 0 0 12418 13350 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Torovirus;s__Bovine torovirus;t__Breda virus 0 0 0 0 0 0 0 569 569 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Leek yellow stripe virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Dengue virus;t__Dengue virus 3 0 0 0 0 0 0 0 214 214 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Pineapple bacilliform comosus virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kpp10virus;s__Pseudomonas virus PAKP3;t__Pseudomonas phage PAK_P3 0 0 0 0 1 524 266 970 1761 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou toro-like virus;t__ 0 0 0 0 0 0 0 607 607 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage BillKnuckles;t__ 0 0 0 0 346 325 0 365 1036 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Pseudomonas phage phiMK;t__ 512 0 0 0 0 0 0 1350 1862 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Sanxia Water Strider Virus 4;t__ 0 0 0 0 0 0 0 258 258 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus Det7;t__Salmonella phage Det7 0 0 0 0 3 215 0 2931 3149 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Salinispora;s__Salinispora tropica;t__Salinispora tropica CNB-440 0 0 16 0 83 0 0 103567 103666 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cecivirus;s__Bacillus virus 250;t__ 0 0 0 0 0 661 0 469 1130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rb49virus;s__Escherichia virus phi1;t__Enterobacteria phage Phi1 0 0 0 0 0 750 0 2535 3285 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Beet pseudoyellows virus;t__ 0 0 0 0 0 0 0 316 316 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Harrisonvirus;s__Paenibacillus virus Harrison;t__Paenibacillus phage Harrison 0 0 0 173 304 0 0 407 884 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phicbkvirus;s__Caulobacter virus Rogue;t__ 0 0 0 0 0 47 0 4427 4474 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus metallidurans;t__Cupriavidus metallidurans CH34 0 0 0 0 0 5 0 7162 8101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Eagle;t__Mycobacterium phage BellusTerra 0 0 0 0 195 331 0 498 1024 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Leaf307;t__ 0 0 7 0 3 40 0 79014 79064 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Rhodobacter phage RcapNL;t__ 0 0 0 0 0 0 0 809 809 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Achromobacter phage JWF;t__ 0 0 0 0 0 0 0 1630 1630 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Aeromonas phage vB_AsaM-56;t__ 0 0 0 0 0 0 0 871 871 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage phiEt88;t__ 0 0 0 0 0 0 0 945 945 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage ET08 0 0 0 7 101 292 2497 211 3108 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Spud 0 0 0 0 133 0 2544 421 3098 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage MoMoMixon 0 0 0 0 131 0 2450 510 3091 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Anaeromyxobacteraceae;g__Anaeromyxobacter;s__Anaeromyxobacter sp. Fw109-5;t__ 2 0 0 2 0 0 0 105555 105559 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Burkholderia phage KS10;t__ 0 0 0 0 0 0 0 752 752 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Luteipulveratus;s__Luteipulveratus mongoliensis;t__ 0 0 6 1 0 0 0 108411 108418 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage phi15;t__ 0 0 0 0 0 0 0 791 791 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK225;t__ 0 0 0 0 5 31 0 871 907 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Mirabilis jalapa mottle virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Equus ferus caballus papillomavirus type 5;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GMA1;t__ 0 0 0 0 0 0 0 824 824 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Cronobacter phage ENT47670;t__ 0 0 0 0 0 0 0 952 952 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage IME10;t__ 0 0 0 68 69 5 0 650 792 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium ginsengisoli;t__ 0 0 0 0 5 29 0 60761 60795 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria flava;t__ 0 0 7 10 0 39 0 70030 70086 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Gryllotalpicola;s__Gryllotalpicola ginsengisoli;t__Gryllotalpicola ginsengisoli DSM 22003 0 0 11 19 50 0 0 58778 58858 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 8;t__Human papillomavirus type 7 0 0 0 0 0 0 0 160 160 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Psychrobacter;s__Psychrobacter alimentarius;t__ 0 0 0 0 0 0 0 325 338 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Xanthomonas phage Xp15;t__ 0 0 0 0 0 0 0 1113 1113 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phicbkvirus;s__Caulobacter virus Swift;t__ 0 0 0 0 0 0 0 4384 4384 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Luteipulveratus;s__Luteipulveratus halotolerans;t__ 0 0 9 15 14 0 0 89244 89282 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Oaker;t__ 0 0 0 0 0 0 0 1381 1381 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__E125virus;s__Burkholderia virus phiE125;t__ 0 0 0 0 0 270 0 797 1067 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Root151;t__ 1 0 52 1 14 109 0 99262 99439 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pakpunavirus;s__Pseudomonas virus PaP1;t__Pseudomonas phage PaP1 0 0 0 0 0 920 0 914 1834 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Cypovirus 15;t__Trichoplusia ni cypovirus 15 0 0 0 0 0 0 0 484 484 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia soli;t__ 0 0 16 41 16 36 0 146083 146202 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__E125virus;s__Burkholderia virus phi1026b;t__ 0 0 0 0 0 0 0 1097 1097 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. Root53;t__ 0 0 8 9 12 80 0 58061 58170 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium zucineum;t__Phenylobacterium zucineum HLK1 0 0 0 0 0 0 0 7515 7659 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium ketosireducens;t__ 0 0 0 0 6 38 0 78302 78346 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage ReqiDocB7;t__ 0 0 0 0 0 0 0 1515 1515 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas;s__Natronomonas pharaonis;t__Natronomonas pharaonis DSM 2160 0 0 0 0 0 0 0 2582 3087 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Dietziaceae;g__Dietzia;s__Dietzia sp. UCD-THP;t__ 9 0 61 20 0 351 0 77448 77889 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfobacterales;f__Desulfobulbaceae;g__Desulfocapsa;s__Desulfocapsa sulfexigens;t__Desulfocapsa sulfexigens DSM 10523 0 0 0 0 0 0 0 735 735 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albulus;t__ 1 0 3 0 0 262 0 151509 151778 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Rhodocyclales;f__Rhodocyclaceae;g__Azoarcus;s__Azoarcus sp. KH32C;t__ 0 0 0 0 0 0 0 14654 14751 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium hominis;t__Microbacterium hominis NBRC 15708 0 0 3 0 10 94 0 69850 69957 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Achromobacter phage phiAxp-1;t__ 0 0 0 0 0 0 0 900 900 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rtpvirus;s__Escherichia virus Rtp;t__ 0 0 0 0 0 0 0 924 924 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage SP-15;t__ 0 0 0 0 0 0 0 4438 4438 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Cucumovirus;s__Gayfeather mild mottle virus;t__ 0 0 0 0 0 0 0 165 165 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__;f__;g__;s__actinobacterium LLX17;t__ 0 0 52 0 0 0 0 59815 59867 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudoalteromonas phage Pq0;t__ 0 0 0 0 0 0 0 667 667 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Louping ill virus;t__ 0 0 0 0 0 2 0 215 217 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Acidimicrobium;s__Acidimicrobium ferrooxidans;t__Acidimicrobium ferrooxidans DSM 10331 0 0 0 0 1 0 0 43162 43163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cronobacter phage phiES15;t__ 0 0 0 0 0 0 0 799 799 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Archie;t__ 0 0 0 0 17 0 0 1508 1525 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces violaceusniger;t__Streptomyces violaceusniger Tu 4113 0 0 0 0 0 0 0 9569 9622 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Benyviridae;g__Benyvirus;s__Beet necrotic yellow vein virus;t__ 0 0 0 0 0 0 0 310 310 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN25;t__ 0 0 0 0 0 0 0 568 568 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage phi-2;t__ 0 0 0 0 0 0 0 862 862 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp. URHD0036;t__ 0 0 16 0 47 31 0 103418 103512 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage ICP2_2013_A_Haiti;t__ 0 0 0 0 0 4 0 1004 1008 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__;s__Rudbeckia flower distortion virus;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Lactococcus virus KSY1;t__ 0 0 0 0 0 0 0 1584 1584 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Okra leaf curl betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Calibrachoa mottle virus;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe heteroptera virus 2;t__ 0 0 0 0 0 0 0 197 197 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter defluvii;t__Lysobacter defluvii IMMIB APB-9 = DSM 18482 0 0 2 1 21 15 0 54378 54417 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Enterobacteria phage UAB_Phi78;t__ 0 0 0 0 0 10 0 868 878 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Arabis mosaic virus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sprivivirus;s__Pike fry rhabdovirus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Pseudoalteromonas phage pYD6-A;t__ 0 0 0 0 0 3 0 1533 1536 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage CL2;t__ 0 0 0 0 0 50 0 725 775 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Bacillus phage 0305phi8-36;t__ 0 0 0 0 0 0 0 4378 4378 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio magneticus;t__Desulfovibrio magneticus RS-1 0 0 0 0 0 0 0 1320 1349 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sigmavirus;s__Drosophila melanogaster sigmavirus;t__Drosophila melanogaster sigmavirus AP30 0 0 0 0 0 0 0 247 247 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Polygonum ringspot orthotospovirus;t__Polygonum ringspot virus 0 0 0 0 0 0 0 317 317 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Shallot virus X;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Agatevirus;s__Bacillus virus Agate;t__Bacillus phage phiAGATE 0 0 0 0 0 0 0 2996 2996 k__Viruses;p__unclassified bacterial viruses;c__Pseudoalteromonas phage PH1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 853 853 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Thermocrispum;s__Thermocrispum municipale;t__Thermocrispum municipale DSM 44069 0 0 25 0 6 2 0 90432 90465 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira;s__Brachyspira hyodysenteriae;t__Brachyspira hyodysenteriae ATCC 27164 0 0 0 0 0 0 0 651 651 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Yam bean mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Sparus aurata papillomavirus 1;t__ 0 0 0 0 0 0 0 114 114 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. HmicA12;t__ 0 0 9 0 1 462 0 182599 183071 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 67;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 13;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage OBP;t__ 0 0 0 0 0 0 0 5695 5695 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 7;t__Human papillomavirus type 109 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Torradovirus;s__Carrot torradovirus 1;t__ 0 0 0 0 0 0 0 235 235 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Blackberry Virus F;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Kubed;t__Propionibacterium phage Kubed 0 0 0 0 2 50 0 537 589 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Phlebiopsis gigantea mycovirus dsRNA 1;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum leaf curl Philippines virus;t__ 0 0 0 0 0 1 0 53 54 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__;s__Geodermatophilaceae bacterium URHB0048;t__ 0 0 12 0 42 28 0 94013 94095 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium yannicii;t__Microbacterium yannicii PS01 0 0 0 0 9 83 0 78830 78922 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage CNPH82;t__ 0 0 0 0 0 0 0 868 868 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Spiromicrovirus;s__Spiroplasma phage 4;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak UM virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptococcus phage PH15;t__ 0 0 0 0 0 0 0 782 782 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Corndogvirus;s__Mycobacterium phage Firecracker;t__ 0 0 0 0 5 557 0 864 1426 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__Frog virus 3;t__ 0 0 0 0 0 0 0 2118 2118 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__;s__Squirrelpox virus;t__ 0 0 0 0 0 0 0 2976 2976 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H1N1 subtype 0 0 0 0 0 0 0 249 249 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__;g__Anphevirus;s__Xincheng anphevirus;t__Xincheng Mosquito Virus 0 0 0 0 0 0 0 254 254 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia sp. Root1293;t__ 0 0 0 0 58 6 0 72159 72223 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Pyrobaculum filamentous virus 1;t__ 0 0 0 0 0 0 0 354 354 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pepper mottle virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Yokose virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Pecan mosaic-associated virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai anemone virus 1;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ledantevirus;s__Wuhan ledantevirus;t__Wuhan Louse Fly Virus 5 0 0 0 0 0 0 0 222 222 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus D;s__Influenza D virus;t__Influenza D virus (D/bovine/France/2986/2012) 0 0 0 0 0 0 0 234 234 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage P60;t__ 0 0 0 0 0 0 0 933 933 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Equine infectious anemia virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Ovine lentivirus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Bean pod mottle virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage C11;t__ 0 0 0 0 1110 333 0 439 1882 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rogue1virus;s__Escherichia virus AHP42;t__Escherichia phage vB_EcoS_AHP42 0 0 0 0 0 516 0 420 936 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Peruvian horse sickness virus;t__ 0 0 0 0 0 0 0 376 376 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Bronvirus;s__Mycobacterium phage Faith1;t__ 0 0 0 0 0 0 0 1519 1519 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacter phage phiEap-1;t__ 0 0 0 0 0 0 0 782 782 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage LF1;t__ 0 0 0 0 0 0 0 852 852 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage VohminGhazi;t__ 0 0 0 0 0 409 0 634 1043 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage ENT90;t__ 0 0 0 0 0 0 0 591 591 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__;s__Propionibacteriaceae bacterium P6A17;t__ 1 0 15 0 95 0 0 54392 54503 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage ZoeJ;t__ 0 0 0 0 47 0 0 1099 1146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 12;t__Human papillomavirus type 132 0 0 0 0 0 0 0 142 142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage PhiCHU;t__ 0 0 0 0 0 0 0 912 912 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium testaceum;t__Microbacterium testaceum StLB037 0 0 0 0 13 107 0 79520 79640 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus SETP3;t__Salmonella phage SETP3 0 0 0 0 56 78 0 717 851 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Cronobacter phage ENT39118;t__ 0 0 0 0 0 0 0 780 780 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Xylanimonas;s__Xylanimonas cellulosilytica;t__Xylanimonas cellulosilytica DSM 15894 7 0 19 23 0 0 0 74806 74855 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium stationis;t__ 0 0 0 0 0 0 0 946 1069 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage iLp1308;t__ 0 0 0 0 0 501 0 182 683 k__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp. J29;t__ 0 0 1 0 51 2 0 67933 67987 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Rhynchosia yellow mosaic India virus;t__ 0 0 0 0 0 1 0 105 106 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvularculales;f__Parvularculaceae;g__Parvularcula;s__Parvularcula oceani;t__ 0 0 2 0 0 0 0 67016 67018 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter sphaeroides;t__Rhodobacter sphaeroides 2.4.1 0 0 0 0 0 0 0 9338 9414 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__P23virus;s__Thermus phage P2345;t__ 0 0 0 0 0 296 0 1388 1684 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Msw3virus;s__Edwardsiella virus PEi21;t__Edwardsiella phage PEi21 0 0 0 0 0 4 0 863 867 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia asaccharolytica;t__Pseudonocardia asaccharolytica DSM 44247 = NBRC 16224 0 0 12 0 1 10 0 100921 100944 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodobacter phage RcapMu;t__ 0 0 0 0 0 0 0 785 785 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Human papillomavirus type 179;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Burkholderia phage BcepGomr;t__ 0 0 0 0 0 0 0 1048 1048 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Fibrovirus;s__Vibrio virus fs1;t__ 0 0 0 0 1 0 0 125 126 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Microbispora;s__Microbispora sp. ATCC PTA-5024;t__ 0 0 3 1 2 0 0 167420 167426 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 1;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage P694;t__ 0 0 0 0 66 0 0 743 809 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Erwinia phage phiEa100;t__ 0 0 0 0 593 0 0 318 911 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia avium;t__Chlamydia avium 10DC88 0 0 0 0 0 1 0 140 141 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 6;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Semliki Forest virus;t__ 0 0 0 0 0 0 0 228 228 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium deserti;t__Corynebacterium deserti GIMN1.010 0 0 0 0 0 0 0 1178 1233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Edwardsiella phage PEi20;t__ 0 0 0 0 1 0 0 3551 3552 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Gardann;t__ 0 0 0 0 891 0 0 629 1520 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Erwinia phage vB_EamP-S6;t__ 0 0 0 0 0 0 0 1493 1493 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Synechococcus phage S-CBS4;t__ 0 0 0 0 0 0 0 1388 1388 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Avian dependoparvovirus 1;t__Avian adeno-associated virus 0 0 0 0 0 1 0 92 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage phi7;t__ 0 0 0 0 27 4 0 616 647 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus KPP12;t__Pseudomonas phage KPP12 0 0 0 0 0 598 0 684 1282 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Dengue virus;t__Dengue virus 2 0 0 0 0 0 0 0 214 214 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Porcine astrovirus 2;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Barnyardvirus;s__Mycobacterium virus Predator;t__Mycobacterium phage Predator 0 0 0 0 0 0 0 1402 1402 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Jurona vesiculovirus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rosebushvirus;s__Mycobacterium virus Godines;t__Mycobacterium phage Qyrzula 0 0 0 0 1 795 0 547 1343 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pbi1virus;s__Mycobacterium virus PBI1;t__Mycobacterium phage PBI1 0 0 0 0 630 0 0 659 1289 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pakpunavirus;s__Pseudomonas virus CAb1;t__Pseudomonas phage vB_PaeM_C2-10_Ab1 0 0 0 0 0 911 0 944 1855 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PopTart;t__ 0 0 0 0 230 305 0 566 1101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Primate norovirus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus APEC5;t__Escherichia phage vB_EcoP_PhAPEC5 0 0 0 0 0 401 0 1023 1424 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage PaMx42;t__ 0 0 0 0 1 0 0 863 864 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium aromaticivorans;t__Novosphingobium aromaticivorans DSM 12444 0 0 0 0 0 0 0 12362 13432 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhizobium phage RHE;t__Rhizobium phage RHEph06 0 0 0 0 0 0 0 1074 1074 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kpp10virus;s__Pseudomonas virus Ab03;t__Pseudomonas phage vB_PaeM_PAO1_Ab03 0 0 0 0 0 282 0 1442 1724 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Epsilontorquevirus;s__Torque teno tamarin virus;t__ 0 0 0 0 0 0 0 67 67 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Prochlorococcus phage P-GSP1;t__ 0 0 0 0 0 0 0 898 898 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Peaches;t__ 0 0 0 0 536 166 0 325 1027 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Micrococcus;s__Micrococcus luteus;t__Micrococcus luteus NCTC 2665 136 0 44 121 16 0 0 49704 50021 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage RE-2010;t__ 0 0 0 0 0 0 0 682 682 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Youcai mosaic virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage GE1;t__ 0 0 0 0 0 0 0 496 496 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Hamiltonella virus APSE1;t__ 0 0 0 0 0 0 0 730 730 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__West Nile virus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Capillovirus;s__Apple stem grooving virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 19;t__ 0 0 0 0 0 0 0 143 143 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus radiodurans;t__Deinococcus radiodurans R1 0 0 0 0 0 0 0 4204 4461 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Clavibacter;s__Clavibacter michiganensis;t__Clavibacter michiganensis subsp. sepedonicus 1 0 5 3 62 0 0 65101 65172 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Ilumatobacter;s__Ilumatobacter nonamiensis;t__Ilumatobacter nonamiensis YM16-303 0 0 0 0 0 1 0 84884 84885 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Seuratvirus;s__Escherichia virus Cajan;t__Escherichia phage CAjan 0 0 0 0 297 0 0 896 1193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Nhonho;t__ 0 0 0 0 64 181 0 782 1027 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage Pollock;t__ 0 0 0 0 0 0 0 1367 1367 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Bokeloh bat lyssavirus;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 6;t__Camelus dromedarius papillomavirus type 1 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Staphylococcus phage S24-1;t__ 0 0 0 0 11 0 0 352 363 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Potato latent virus;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 5;t__Human papillomavirus type 96 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Xp10virus;s__Xanthomonas phage phiL7;t__ 0 0 0 0 0 0 0 881 881 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus jostii;t__Rhodococcus jostii RHA1 0 0 0 0 0 0 0 37677 37955 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz24virus;s__Pseudomonas phage MR299-2;t__Pseudomonas phage vB_PaeP_C1-14_Or 0 0 0 0 0 182 0 698 880 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__;s__Cherry associated luteovirus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Chipapillomavirus;s__Chipapillomavirus 1;t__Canine papillomavirus 3 0 0 0 0 0 0 0 156 156 k__Viruses;p__unclassified viruses;c__Porcine stool-associated circular virus;o__;f__;g__;s__;t__ 7 0 0 0 0 0 0 44 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pepy6virus;s__Rhodococcus virus Poco6;t__Rhodococcus phage ReqiPepy6 0 0 0 0 0 0 0 1535 1535 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella sp. phage 1/40;t__ 0 0 0 0 0 753 0 2027 2780 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Murine coronavirus;t__Murine hepatitis virus 0 0 0 0 0 0 0 627 627 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella muralis;t__ 1 0 21 0 0 233 0 144866 145121 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus aetherivorans;t__ 0 0 4 31 0 0 0 118419 118454 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Bat mastadenovirus WIV11;t__ 0 0 0 0 0 0 0 761 761 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Chapare mammarenavirus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Sunviridae;g__Sunshinevirus;s__Reptile sunshinevirus 1;t__Sunshine Coast virus 0 0 0 0 0 0 0 343 343 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Reptarenavirus;s__Alethinophid 3 reptarenavirus;t__CAS virus 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Bean common mosaic virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Narcissus symptomless virus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sbash;t__ 0 0 0 0 28 1 0 1083 1116 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;s__Bacillus cereus;t__Bacillus cereus ATCC 14579 0 0 0 0 0 0 0 305 305 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Nocardia;s__Nocardia farcinica;t__ 0 0 11 32 43 63 0 72826 72975 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz24virus;s__Pseudomonas phage phiIBB-PAA2;t__ 0 0 0 0 121 225 0 560 906 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium carboxidivorans;t__Clostridium carboxidivorans P7 0 0 0 0 0 0 0 398 398 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage martha 12B12;t__ 0 0 0 0 0 0 0 665 665 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. WMMB 714;t__ 0 0 5 0 8 156 0 131663 131832 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Rattus norvegicus polyomavirus 2;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Simian immunodeficiency virus;t__Simian immunodeficiency virus - mnd 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 14;t__Human papillomavirus type 131 0 0 0 0 0 0 0 143 143 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage DCC1738;o__;f__;g__;s__;t__ 0 347 0 0 0 0 0 420 767 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 2;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 34;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Cercopithecus erythrotis polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanococci;o__Methanococcales;f__Methanocaldococcaceae;g__Methanocaldococcus;s__Methanocaldococcus vulcanius;t__Methanocaldococcus vulcanius M7 0 0 0 0 0 0 0 306 306 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Wesselsbron virus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 2;t__ 0 0 0 0 0 0 0 182 182 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thioflavicoccus;s__Thioflavicoccus mobilis;t__Thioflavicoccus mobilis 8321 0 0 0 0 0 0 0 1680 1771 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Nepavirus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Potato virus M;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Thogotovirus;s__Thogoto virus;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Rubus canadensis virus 1;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyorhopapillomavirus;s__Dyorhopapillomavirus 1;t__Equus caballus papillomavirus 3 0 0 0 0 0 0 0 151 151 k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Rubritepida;s__Rubritepida flocculans;t__Rubritepida flocculans DSM 14296 0 1 1 0 11 0 0 76519 76532 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella gansuensis;t__Jiangella gansuensis DSM 44835 1 0 15 0 0 46 0 111622 111684 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xingshan nematode virus 5;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Narcissus degeneration virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus SN;t__Pseudomonas phage SN 0 0 0 0 0 684 0 643 1327 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage S-CBP4;t__ 0 0 0 0 0 3 0 879 882 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sipunculid worm virus 4;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xingshan nematode virus 4;t__ 0 0 0 0 0 0 0 234 234 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Yersinia phage vB_YenP_ISAO8;t__ 0 0 0 0 0 0 0 828 828 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas sanxanigenens;t__Sphingomonas sanxanigenens DSM 19645 = NX02 0 0 0 0 2 0 0 5825 7488 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcep78virus;s__Burkholderia virus Bcep1;t__ 0 0 0 0 0 0 0 963 963 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 11;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 2;t__ 0 0 0 0 0 0 0 181 181 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Acidipropionibacterium;s__Acidipropionibacterium acidipropionici;t__ 0 0 0 0 0 0 0 73027 73027 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Sp31virus;s__Salmonella virus SP31;t__Salmonella phage FSL SP-031 0 0 0 0 0 0 0 844 844 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Entebbe bat virus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Magnaporthe oryzae chrysovirus 3;t__ 0 0 0 0 0 0 0 304 304 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Pea streak virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Yam latent virus;t__ 0 0 0 0 0 0 0 170 170 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium jeikeium;t__Corynebacterium jeikeium K411 0 0 0 0 0 0 0 286 286 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea ferrariae;t__Actinotalea ferrariae CF5-4 54 0 5 26 25 0 0 78444 78554 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 7;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Andromedavirus;s__Bacillus virus Blastoid;t__ 0 0 0 0 0 102 0 905 1007 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Janibacter;s__Janibacter sp. Soil728;t__ 0 0 11 13 13 26 0 72676 72739 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Sp18virus;s__Shigella virus SP18;t__Shigella phage SP18 0 0 0 0 6 0 0 3406 3412 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobus monocaudavirus SMV1;t__ 0 0 0 0 0 0 0 975 975 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia neofelifaecis;t__Gordonia neofelifaecis NRRL B-59395 0 0 2 41 0 11 0 85003 85057 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pteronotus polyomavirus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao alphatetra-like virus 1;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 70;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pomovirus;s__Broad bean necrosis virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus E;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Shallot yellow stripe virus;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 66;t__ 0 0 0 0 0 0 0 184 184 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium chocolatum;t__ 0 0 8 8 16 132 0 62194 62358 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Parramatta River virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Fabavirus;s__Broad bean wilt virus 1;t__ 0 0 0 0 0 0 0 183 183 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Thermocrispum;s__Thermocrispum agreste;t__Thermocrispum agreste DSM 44070 0 0 13 0 9 603 0 83263 83888 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Uncultured phage WW-nAnB strain 2;t__ 0 0 0 0 0 8 0 93 101 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Ornithinimicrobium;s__Ornithinimicrobium pekingense;t__Ornithinimicrobium pekingense DSM 21552 0 0 14 15 1 0 0 76994 77024 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Tetrasphaera;s__Tetrasphaera sp. Soil756;t__ 0 0 39 28 72 24 0 69047 69210 k__Viruses;p__dsDNA viruses, no RNA stage;c__Poxviridae;o__;f__;g__Parapoxvirus;s__Bovine papular stomatitis virus;t__ 0 0 0 0 0 1 0 2687 2688 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sea slater virus 3;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Proteus phage PM 85;t__ 0 0 0 0 0 145 0 727 872 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 29;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterococcus phage vB_Efae230P-4;t__ 0 0 0 0 0 0 0 359 359 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage J2;t__ 0 0 0 0 234 54 0 502 790 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Fusarium poae fusarivirus 1;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Equine polyomavirus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Js98virus;s__Escherichia virus VR5;t__Enterobacteria phage vB_EcoM_VR5 0 0 0 0 51 70 0 3288 3409 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xingshan nematode virus 1;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Vibrio phage VP93;t__ 0 0 0 0 0 0 0 878 878 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 45;t__ 0 0 0 0 0 0 0 121 121 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia gallinacea;t__Chlamydia gallinacea 08-1274/3 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Varicosavirus;s__Lettuce big-vein associated varicosavirus;t__Lettuce big-vein associated virus 0 0 0 0 0 0 0 254 254 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Ophiostoma mitovirus 5;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hermit crab virus 1;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Thunberg fritillary virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Apium virus Y;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Ralstonia phage 1 NP-2014;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Bymovirus;s__Barley mild mosaic virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Vicia faba alphaendornavirus;t__ 0 0 0 0 0 0 0 352 352 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Impatiens necrotic spot orthotospovirus;t__Impatiens necrotic spot virus 0 0 0 0 0 0 0 331 331 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Ugandan cassava brown streak virus;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Cassava brown streak virus;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacteria phage ES18;t__ 0 0 0 57 0 0 0 880 937 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 22;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Staphylococcus phage CNPx;t__ 0 0 0 0 821 0 0 44 865 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rogue1virus;s__Escherichia virus E41c;t__Escherichia phage e4/1c 0 0 0 0 0 146 0 796 942 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Proteus phage PM 75;t__ 0 0 0 0 0 0 0 829 829 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 1;t__Human papillomavirus type 4 0 0 0 0 0 0 0 147 147 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Gossypium davidsonii symptomless alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Chimpanzee faeces associated microphage 2;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Streptococcus phage Str-PAP-1;t__ 0 0 0 0 0 0 0 731 731 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao sobemo-like virus 3;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sweet potato feathery mottle virus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage BPS15Q2;t__ 0 0 0 0 238 0 0 1558 1796 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Betacoronavirus 1;t__Bovine coronavirus 0 0 0 0 0 0 0 620 620 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Human respirovirus 1;t__ 0 0 0 0 0 0 0 311 311 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Triatovirus;s__Triatoma virus;t__ 0 0 0 0 0 0 0 180 180 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella scopos;t__Prevotella scopos JCM 17725 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 14;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei leech virus 2;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage 29;t__ 0 0 0 0 54 469 0 333 856 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 17;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 71;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Vervet monkey polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Nonagvirus;s__Escherichia virus 9g;t__Enterobacteria phage 9g 0 0 0 0 0 124 0 1010 1134 k__BacteriaPlasmid;p__Fusobacteria;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;s__Fusobacterium nucleatum;t__Fusobacterium nucleatum subsp. animalis 0 0 0 0 0 0 0 126 126 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 49;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 4;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Shigella virus Sb1;t__Shigella phage pSb-1 0 0 0 0 0 8 0 1424 1432 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Escherichia virus YD2008s;t__Escherichia phage YD-2008.s 0 0 0 0 18 22 0 852 892 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan millipede virus 3;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 51;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Papaya meleira virus;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe heteroptera virus 4;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__E125virus;s__Burkholderia virus phi6442;t__ 0 0 0 0 0 244 0 729 973 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Xishuangbanna aedes flavivirus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Lagenaria siceraria endornavirus-Hubei;t__ 0 0 0 0 0 0 0 301 301 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Myzus persicae) 0 0 0 0 0 0 0 155 155 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hepe-like virus 8;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betacarmovirus;s__Cardamine chlorotic fleck virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Murine astrovirus;t__ 0 0 0 0 0 0 0 136 136 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Diaphorina citri densovirus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus B;t__Human adenovirus B1 0 0 0 0 0 0 2 708 710 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage VMY22;t__ 0 0 0 0 0 0 0 372 372 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosaetaceae;g__Methanosaeta;s__Methanosaeta harundinacea;t__Methanosaeta harundinacea 6Ac 0 0 0 0 0 0 0 239 239 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__;s__Rousettus bat coronavirus;t__ 0 0 0 0 0 0 0 603 603 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Bdellovibrionales;f__Halobacteriovoraceae;g__Halobacteriovorax;s__Halobacteriovorax marinus;t__Halobacteriovorax marinus SJ 0 0 0 0 0 0 0 39 39 k__Viruses;p__unclassified viruses;c__Diaphorina citri flavi-like virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 554 554 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Aphid lethal paralysis virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__unclassified viruses;c__Thika virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Giant guitarfish polyomavirus 1;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium poae dsRNA virus 2;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Botrytis cinerea RNA virus 1;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Vibrio phage VSK;t__ 0 0 0 0 19 0 0 118 137 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus B;t__Human rotavirus B 0 0 0 0 0 0 0 340 340 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 28;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 4;t__ 0 0 0 0 0 0 0 300 300 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia felis;t__Chlamydia felis Fe/C-56 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 8;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe narna-like virus 7;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 1;t__ 0 0 0 0 0 0 0 373 373 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__T'Ho virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__Alphamesonivirus;s__Alphamesonivirus 5;t__Hana virus 0 0 0 0 0 0 0 401 401 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Escherichia virus M13;t__Enterobacteria phage M13 0 0 0 0 0 0 0 128 128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage vB_PaeS_PAO1_Ab30;t__ 0 0 0 0 245 278 0 221 744 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 7;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 21;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Rhynchosia golden mosaic virus;t__ 0 0 0 0 0 1 0 100 101 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Rosadnavirus;s__Rose yellow vein virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus 172-1;t__Escherichia phage 172-1 0 0 0 0 0 652 0 893 1545 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Dengue virus;t__Dengue virus 1 0 0 0 0 0 0 0 214 214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Escherichia phage slur05;t__ 0 0 0 0 0 39 0 838 877 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Yunnan orbivirus;t__ 0 0 0 0 0 0 0 379 379 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 6;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl New Delhi betasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Carrot thin leaf virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Klebsiella phage phiKO2;t__ 0 0 0 0 0 0 0 1032 1032 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus spindle-shaped virus 5;t__ 0 0 0 0 0 126 0 180 306 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Human coronavirus NL63;t__ 0 0 0 0 0 0 0 551 551 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Carnivore bocaparvovirus 1;t__Canine minute virus 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Marine RNA virus JP-B;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__unclassified viruses;c__Nylanderia fulva virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 35;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Cauliflower mosaic virus;t__ 0 0 0 0 0 0 0 160 160 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium oxydans;t__ 0 0 0 0 6 65 0 76035 76106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Phormidium phage Pf-WMP4;t__ 0 0 0 0 0 0 0 818 818 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hp1virus;s__Vibrio phage K139;t__ 0 0 0 0 0 0 0 662 662 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia;s__Burkholderia gladioli;t__ 0 0 0 0 0 0 0 5933 6063 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Salmonella phage 118970_sal2;t__ 0 0 0 0 3 2267 0 13 2283 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Salmonella virus SH19;t__Salmonella phage Sh19 0 0 0 0 484 1409 0 1262 3155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus C;t__ 0 0 0 0 0 0 0 913 913 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato yellow leaf curl Vietnam betasatellite;t__ 0 0 0 0 0 3 0 24 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Prochlorococcus phage P-SSP10;t__ 0 0 0 0 0 131 0 815 946 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD44;t__ 0 47 0 0 21 26 0 886 980 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 112;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 3;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Xinzhou spider virus 3;t__ 0 0 0 0 0 0 0 408 408 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Prochlorococcus phage P-SSP3;t__ 0 0 0 0 0 0 0 923 923 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phi29virus;s__Bacillus virus B103;t__ 0 0 0 0 0 0 0 372 372 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Pseudoalteromonas phage H103;t__ 0 0 0 0 0 0 0 863 863 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Yam mild mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes schweinfurthii polyomavirus 2;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__Virus families not assigned to an order;c__Lavidaviridae;o__;f__;g__Sputnikvirus;s__Mimivirus-dependent virus Zamilon;t__Zamilon virus 0 0 0 0 0 0 0 345 345 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Perhabdovirus;s__Perch perhabdovirus;t__ 0 0 0 0 0 0 0 229 229 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__Bovine foamy virus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Merino Walk mammarenavirus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 33;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Lambdatorquevirus;s__Torque teno zalophus virus 1;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-29;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phietavirus;s__Staphylococcus phage Ipla7;t__ 0 0 0 0 1 332 0 509 842 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Rymovirus;s__Ryegrass mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage phi 1;t__ 0 0 0 0 121 0 0 1213 1334 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL301M00;t__Propionibacterium phage PHL301M00 0 0 0 0 15 51 0 520 586 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 7;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Fox fecal rhabdovirus;t__ 0 0 0 0 0 0 0 310 310 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Tacheng Tick Virus 4;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Avisivirus;s__Avisivirus C;t__Chicken picornavirus 3 0 0 0 0 0 0 0 143 143 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEp235;t__ 0 0 0 35 16 339 0 361 751 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__;f__;g__Thiolapillus;s__Thiolapillus brandeum;t__ 0 0 0 0 0 0 0 366 476 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Salmonella phage BP63;t__ 0 0 0 0 0 0 0 1048 1048 k__Bacteria;p__Proteobacteria;c__Deltaproteobacteria;o__Myxococcales;f__Anaeromyxobacteraceae;g__Anaeromyxobacter;s__Anaeromyxobacter dehalogenans;t__Anaeromyxobacter dehalogenans 2CP-1 2 0 0 2 0 28 0 100554 100586 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Aura virus;t__ 0 0 0 0 0 0 0 236 236 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Hoyosella;s__Hoyosella subflava;t__Hoyosella subflava DQS3-9A1 0 0 0 0 0 0 0 2467 2490 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Avian leukosis virus;t__Avian leukemia virus 0 0 0 0 0 7 11 131 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas phage vB_PaeM_PAO1_Ab27;t__ 0 0 0 0 0 702 0 623 1325 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Plum bark necrosis stem pitting-associated virus;t__ 0 0 0 0 0 0 0 284 284 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 19;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Red clover mottle virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Duck aviadenovirus B;t__Duck adenovirus 2 0 0 0 0 0 0 0 874 874 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 64;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kamiti River virus;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__Raspberry leaf blotch emaravirus;t__ 0 0 0 0 0 0 0 334 334 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Citrobacter;s__Citrobacter amalonaticus;t__ 0 0 0 0 0 0 0 913 1066 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Corynebacterium phage P1201;t__ 0 0 0 0 0 0 0 1411 1411 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Diamondback moth iflavirus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Bamboo mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Tl2011virus;s__Escherichia virus TL2011;t__Escherichia phage TL-2011c 0 0 0 2 1051 0 0 157 1210 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Candiru phlebovirus;t__Chandiru virus 0 0 0 0 0 0 0 245 245 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Redno2;t__ 0 0 0 0 231 1 0 1933 2165 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak UA virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bat polyomavirus 6b;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Asclepias asymptomatic virus;t__ 0 0 0 0 0 0 0 123 123 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus jiangxiensis;t__ 3 0 27 0 65 0 0 189014 189109 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Okahandja mammarenavirus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Human rubulavirus 4;t__Human parainfluenza virus 4a 0 0 0 0 0 0 0 341 341 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Erysimum latent virus;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Iltovirus;s__Psittacid alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 3260 3260 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage VPMS1;t__ 0 0 0 0 0 0 0 846 846 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces urogenitalis;t__Actinomyces urogenitalis DSM 15434 9 0 30 0 2 34 0 51768 51843 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Maize mosaic nucleorhabdovirus;t__ 0 0 0 0 0 0 0 242 242 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-22;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Erwinia virus Era103;t__Erwinia amylovora phage Era103 0 0 0 0 0 0 0 908 908 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Raspberry ringspot virus;t__ 0 0 0 0 0 0 0 235 235 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Japan virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Qinghai Himalayan marmot astrovirus 1;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Bethlehem;t__ 0 0 0 0 202 41 0 801 1044 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Otomops polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Ebolavirus;s__Sudan ebolavirus;t__ 0 0 0 0 0 0 0 377 377 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Fusarium poae negative-stranded virus 2;t__ 0 0 0 0 0 0 0 132 132 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp. A375-1;t__ 0 0 6 60 2 83 0 74118 74269 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__East Asian Passiflora virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 2;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Rose leaf rosette-associated virus;t__ 0 0 0 0 0 0 0 353 353 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Salmonella phage ST64T;t__ 0 0 0 1 0 412 0 400 813 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter chromiiresistens;t__ 20 0 1 0 4 37 1 55459 55522 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Insect virus 7;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Elvirus;s__Pseudomonas virus EL;t__Pseudomonas phage EL 0 0 0 0 0 0 0 4224 4224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage vB_SalM_PM10;t__ 0 0 0 15 1372 157 0 1617 3161 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Kytococcus;s__Kytococcus sedentarius;t__Kytococcus sedentarius DSM 20547 0 0 11 54 22 0 0 55613 55700 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Minerva;t__ 0 0 0 0 195 1193 0 809 2197 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 10;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Lettuce mosaic virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sripuvirus;s__Almpiwar sripuvirus;t__Almpiwar virus 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Cricket paralysis virus;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Rattail cactus necrosis-associated virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Botrytis cinerea mitovirus 3;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Bat coronavirus 1A;t__ 0 0 0 0 0 0 0 566 566 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Butcherbird polyomavirus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 68;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Yak enterovirus;t__ 0 0 0 0 0 0 0 147 147 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. Root180;t__ 0 0 0 0 13 120 0 66812 66945 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Leptopilina boulardi Toti-like virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Velarivirus;s__Little cherry virus 1;t__ 0 0 0 0 0 0 0 338 338 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Erwinia phage FE44;t__ 0 0 0 0 0 0 0 797 797 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Rabbit bocaparvovirus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Small ruminant morbillivirus;t__ 0 0 0 0 0 0 0 318 318 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Gordonia phage GMA3;t__ 0 0 0 0 0 0 0 1555 1555 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Muvirus;s__Haemophilus phage SuMu;t__ 0 0 0 0 0 0 0 743 743 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Bush viper reovirus;t__ 0 0 0 0 0 0 0 462 462 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan fly virus 5;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Mint virus 1;t__ 0 0 0 0 0 0 0 308 308 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 122;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sida leaf curl virus-associated DNA 1;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe hepe-like virus 1;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Escherichia phage N4;t__ 0 0 0 0 0 0 0 1403 1403 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage P68;t__ 0 0 0 0 0 0 0 364 364 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 2;t__ 0 0 0 0 0 0 0 259 259 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Chordovirus;s__Carrot Ch virus 2;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-23;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 5;t__ 0 0 0 0 0 0 0 345 345 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Alfalfa dwarf cytorhabdovirus;t__Alfalfa dwarf virus 0 0 0 0 0 0 0 289 289 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__Hepatitis C virus genotype 4 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Robigovirus;s__Cherry rusty mottle associated virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Solendovirus;s__Sweet potato vein clearing virus;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage phiPsa374;t__ 0 0 0 0 0 0 0 1958 1958 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia sp. F;t__ 0 0 7 0 3 0 0 55965 55988 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__Pigeon pea sterility mosaic virus;t__ 0 0 0 0 0 1 0 272 273 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Snakehead retrovirus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 51;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Iodobacteriophage phiPLPE;t__ 0 0 0 0 0 0 0 949 949 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Siadenovirus;s__Frog siadenovirus A;t__Frog adenovirus 1 0 0 0 0 0 0 0 523 523 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Sweet potato mild mottle virus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Avian adeno-associated virus ATCC VR-865;t__ 0 0 0 0 0 0 0 93 93 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanothermobacter;s__Methanothermobacter marburgensis;t__Methanothermobacter marburgensis str. Marburg 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Thogotovirus;s__Dhori virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Alpha3microvirus;s__Enterobacteria phage WA13 sensu lato;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__unclassified bacterial viruses;c__Lactobacillus prophage Lj771;o__;f__;g__;s__;t__ 7 0 0 0 0 0 0 810 817 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Xp10virus;s__Xanthomonas phage OP1;t__ 0 0 0 0 0 11 0 864 875 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium indicum;t__Microbacterium indicum DSM 19969 0 0 0 0 15 24 0 56070 56109 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Mink coronavirus 1;t__Mink coronavirus strain WD1127 0 0 0 0 0 0 0 578 578 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. Tu6071;t__ 0 0 0 0 0 0 0 2898 2946 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Turnip yellow mosaic virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Np1virus;s__Pseudomonas virus NP1;t__Pseudomonas phage NP1 0 0 0 0 0 0 0 1171 1171 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Arracacha mottle virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pamx74virus;s__Pseudomonas virus PaMx28;t__Pseudomonas phage PaMx28 0 0 0 0 0 0 0 1098 1098 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Morganellaceae;g__Xenorhabdus;s__Xenorhabdus doucetiae;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pakpunavirus;s__Pseudomonas virus PAKP1;t__Pseudomonas phage PAK_P1 0 0 0 0 0 278 0 1585 1863 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus D;t__Human adenovirus 54 0 0 0 0 0 0 21 677 698 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Trichoderma atroviride mycovirus;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai rhabdo-like virus 2;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ledantevirus;s__Kolente ledantevirus;t__Kolente virus 0 0 0 0 0 0 0 222 222 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 3;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage BarrelRoll;t__ 0 0 0 0 180 8 0 1005 1193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage 118970_sal1;t__ 0 0 0 0 36 346 0 808 1190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Callistephus mottle virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Human papillomavirus type 140;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Silicibacter phage DSS3phi2;t__ 0 0 0 0 0 0 0 1492 1492 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Human immunodeficiency virus 2;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Mokola lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus Ent1;t__Salmonella phage Ent1 0 0 0 0 562 168 0 117 847 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Yunnan virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Gamboa mosquito virus;t__ 0 0 0 0 0 0 0 526 526 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei qinvirus-like virus 1;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Epsilon15virus;s__Escherichia virus phiV10;t__Escherichia phage phiV10 0 0 0 0 0 0 0 782 782 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus H;t__Adult diarrheal rotavirus strain J19 0 0 0 0 0 0 0 340 340 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Usutu virus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Canine astrovirus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Avastrovirus;s__Avastrovirus 3;t__Turkey astrovirus 2 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ssp2virus;s__Vibrio virus MAR10;t__Vibrio phage vB_VpaS_MAR10 0 0 0 0 0 0 0 1575 1575 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__;s__Chocolate lily virus A;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__K1gvirus;s__Escherichia virus K1G;t__Escherichia phage K1-dep(4) 0 0 0 0 1 0 0 870 871 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 71;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 15;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Pegivirus B;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shigella phage SfIV;t__ 0 0 0 9 0 221 0 565 795 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe arthropod virus 1;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Gammacoronavirus;s__Avian coronavirus;t__Turkey coronavirus 0 0 0 0 0 0 3 550 553 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp. WM4235;t__ 0 0 12 0 6 683 0 154640 155341 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 1 LDMD-2013;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vhmlvirus;s__Vibrio virus MAR;t__Vibrio phage vB_VpaM_MAR 0 0 0 0 0 278 0 549 827 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Changping Tick Virus 3;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Poacevirus;s__Triticum mosaic virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Gannoruwa bat lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Rabies lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Tortoise rafivirus A;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 4;t__Human papillomavirus type 92 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Marvinvirus;s__Mycobacterium virus Mosmoris;t__Mycobacterium phage MosMoris 0 0 0 0 3 0 0 1301 1304 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus phage M6162;t__ 0 0 0 0 0 344 0 89 433 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus phage M5938;t__ 0 0 0 0 0 237 0 207 444 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Wisteria badnavirus 1;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Cucumis melo alphaendornavirus;t__ 0 0 0 0 0 0 0 301 301 k__ArchaeaPlasmid;p__Euryarchaeota;c__Methanomicrobia;o__Methanosarcinales;f__Methanosaetaceae;g__Methanosaeta;s__Methanosaeta concilii;t__Methanosaeta concilii GP6 0 0 0 0 0 0 0 356 360 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Ranavirus;s__Epizootic haematopoietic necrosis virus;t__ 0 0 0 0 0 101 0 2439 2540 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Wheat eqlid mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 3;t__Human papillomavirus type 50 0 0 0 0 0 0 0 143 143 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Night heron coronavirus HKU19;t__ 0 0 0 0 0 0 0 521 521 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Ceratobasidium endornavirus D;t__ 0 0 0 0 0 0 0 388 388 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Fimoviridae;g__Emaravirus;s__Rose rosette emaravirus;t__ 0 0 0 0 0 0 0 241 241 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Yellow oat-grass mosaic virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 52;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__Equine foamy virus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Munia coronavirus HKU13;t__Munia coronavirus HKU13-3514 0 0 0 0 0 0 0 531 531 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Tula orthohantavirus;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Cellulophaga phage phi48:2;t__ 0 0 0 0 0 0 0 234 234 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 17;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Bean yellow disorder virus;t__ 0 0 0 0 0 0 0 348 348 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Bruges orthohantavirus;t__Bruges virus 0 0 0 0 0 0 0 236 236 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei chuvirus-like virus 3;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Dinovernavirus;s__Aedes pseudoscutellaris reovirus;t__ 0 0 0 0 0 0 0 447 447 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus LLKu;t__ 0 0 0 0 0 18 0 603 621 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes verus polyomavirus 4;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Moussa virus;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Lymantria dispar iflavirus 1;t__ 0 0 0 0 0 0 0 200 200 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Blattabacteriaceae;g__Blattabacterium;s__Blattabacterium sp. (Blaberus giganteus);t__ 0 0 0 0 0 13 0 55 68 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 17;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Woodchuck hepatitis virus;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Grapevine virus F;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Human polyomavirus 2;t__JC polyomavirus 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Narcissus late season yellows virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Tomato infectious chlorosis virus;t__ 0 0 0 0 0 0 0 321 321 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK630;t__ 0 0 0 131 0 762 0 48 941 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK629;t__ 0 0 0 103 3 680 0 159 945 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium sp. KMS;t__ 0 0 0 0 0 0 0 7766 10375 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage BP12C;t__ 0 0 0 0 400 0 0 812 1212 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Tobacco mosqueado virus;t__ 0 0 0 0 0 0 0 197 197 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Citricoccus;s__Citricoccus sp. CH26A;t__ 4 0 4 3 10 0 0 69193 69214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Ligamenvirales;o__;f__Lipothrixviridae;g__Gammalipothrixvirus;s__Acidianus filamentous virus 1;t__ 0 0 0 0 0 0 0 417 417 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Japanese yam mosaic virus;t__ 0 0 0 0 0 0 0 195 195 k__BacteriaPlasmid;p__Bacteroidetes;c__Bacteroidia;o__Bacteroidales;f__Prevotellaceae;g__Prevotella;s__Prevotella dentalis;t__Prevotella dentalis DSM 3688 0 0 0 0 0 0 0 179 179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Kappapapillomavirus;s__Kappapapillomavirus 1;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 76;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__;g__;s__Sclerotinia sclerotiorum negative-stranded RNA virus 3;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Primate bocaparvovirus 2;t__Human bocavirus 2c PK 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__American bat vesiculovirus;t__American bat vesiculovirus TFFN-2013 0 0 0 0 0 0 0 213 213 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Ceratobasidium endornavirus A;t__ 0 0 0 0 0 0 0 304 304 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 32;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dragonfly associated cyclovirus 2;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Honeysuckle ringspot virus;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL171M01;t__Propionibacterium phage PHL171M01 0 0 0 0 2 15 0 569 586 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Malaga virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterobacter phage phiEap-2;t__ 0 0 0 0 0 0 0 809 809 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 12;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__California sea lion polyomavirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus triatomae;t__Rhodococcus triatomae BKS 15-14 0 0 5 20 12 29 0 116282 116348 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Human papillomavirus type 136;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Lone Star virus;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Clerodendron golden mosaic virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P22virus;s__Enterobacteria phage UAB_Phi20;t__ 0 0 0 2 0 807 0 27 836 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 80;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Gadgets Gully virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactococcus phage PLgT-1;t__ 0 0 0 0 0 0 0 805 805 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter bacteriophage AP22;t__ 0 0 0 0 0 0 0 927 927 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Coltivirus;s__Eyach virus;t__ 0 0 0 0 0 0 0 563 563 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Bat coronavirus CDPHE15;t__Bat coronavirus CDPHE15/USA/2006 0 0 0 0 0 0 0 560 560 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Sunflower mild mosaic virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Iris severe mosaic virus;t__ 0 0 0 0 0 0 0 208 208 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides alkalitolerans;t__Nocardioides alkalitolerans DSM 16699 0 0 9 0 7 27 0 97006 97049 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Asian prunus virus 3;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Fibrovirus;s__Vibrio virus VGJ;t__Vibrio phage VGJphi 0 0 0 0 14 11 0 125 150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 12;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 2;t__ 0 0 0 0 0 0 0 298 298 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Sweet potato badnavirus B;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage S-CBP1;t__ 0 0 0 0 0 0 0 930 930 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Border disease virus;t__ 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage Lmd1;t__ 0 0 0 0 0 114 0 410 524 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 4;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Human papillomavirus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Insect virus 2;t__ 0 0 0 0 0 0 0 304 304 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou dimarhabdovirus virus 1;t__ 0 0 0 0 0 0 0 186 186 k__BacteriaPlasmid;p__Spirochaetes;c__Spirochaetia;o__Spirochaetales;f__Spirochaetaceae;g__Treponema;s__Treponema putidum;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Asian prunus virus 1;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Shamonda orthobunyavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Gammarus sp. amphipod associated circular virus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Murine leukemia-related retroviruses;t__XMRV-related viruses 0 0 0 0 0 4 0 159 163 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 118;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 12;t__Human papillomavirus type 127 0 0 0 0 0 0 0 143 143 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Seadornavirus;s__Liao ning virus;t__ 0 0 0 0 0 0 0 392 392 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 1;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Euphorbia ringspot virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus C;s__Influenza C virus;t__Influenza C virus (C/Ann Arbor/1/50) 0 0 0 0 0 0 0 240 240 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 36;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Acyrthosiphon pisum virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Hymenopteran ambidensovirus 1;t__Solenopsis invicta densovirus 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__Bivalve hepelivirus G;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sunflower ring blotch virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__unidentified adenovirus;t__ 0 0 0 0 0 0 0 493 493 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Mindy;t__ 0 0 0 0 1278 146 0 91 1515 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage PV94;t__ 0 0 0 0 0 0 0 676 676 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus B;t__Fowl aviadenovirus 5 0 0 0 0 0 0 0 915 915 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Bog1249_12;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Mycoreovirus;s__Mycoreovirus 1;t__ 0 0 0 0 0 0 0 450 450 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 1;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao insect virus 8;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Diatraea saccharalis densovirus;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 16;t__ 0 0 0 0 0 0 0 270 270 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Walkabout Creek virus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__STL polyomavirus;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Arenavirus;s__Mopeia Lassa virus reassortant 29;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Mopeia mammarenavirus;t__Mopeia virus AN20410 0 0 0 0 127 0 0 85 212 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 96;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phijl1virus;s__Pediococcus phage clP1;t__ 0 0 0 0 0 0 0 760 760 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__G4microvirus;s__Escherichia virus Talmos;t__Enterobacteria phage ID2 Moscow/ID/2001 0 0 0 0 0 0 0 109 109 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P105;t__Propionibacterium phage P105 0 0 0 0 0 30 0 554 584 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Torradovirus;s__Tomato necrotic dwarf virus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__Hepatitis C virus genotype 6 0 0 0 0 0 0 0 192 192 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai toti-like virus 4;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Quail picornavirus QPV1/HUN/2010;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sphaeromadae virus 1;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Catharanthus mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__Sugarcane striate mosaic-associated virus;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Strawberry vein banding virus;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Emilia yellow vein virus-associated DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Huangpi Tick Virus 1;t__ 0 0 0 0 0 0 0 365 365 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vhmlvirus;s__Vibrio virus VHML;t__Vibrio phage VHML 0 0 0 0 0 0 0 863 863 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Red clover vein mosaic virus;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pea seed-borne mosaic virus;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus MLB1;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Quezon orthohantavirus;t__Quezon virus 0 0 0 0 0 0 0 239 239 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Plumeria mosaic virus;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Salmonella phage 103203_sal5;t__ 0 0 0 19 531 211 0 47 808 k__BacteriaPlasmid;p__Chloroflexi;c__Thermomicrobia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__Thermomicrobium;s__Thermomicrobium roseum;t__Thermomicrobium roseum DSM 5159 0 0 0 0 0 0 0 18270 18354 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus APEC7;t__Escherichia phage vB_EcoP_PhAPEC7 0 0 0 0 0 0 0 1435 1435 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Bhendi yellow vein India betasatellite;t__Bhendi yellow vein India betasatellite [India:Aurangabad:OY164:2006] 0 0 0 0 0 1 0 26 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chickpea chlorotic dwarf virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai rhabdo-like virus 5;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Lambdapapillomavirus 5;t__Crocuta crocuta papillomavirus 1 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Centovirus;t__Centovirus AC 0 0 0 0 0 0 0 181 181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Vibrio phage pYD38-B;t__ 0 0 0 0 0 4 0 742 746 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus A;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Lutzomyia reovirus 1;t__ 0 0 0 0 0 0 0 426 426 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Orthopteran densovirus 1;t__Acheta domestica mini ambidensovirus 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sorghum mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__unclassified viruses;c__Mollivirus sibericum;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 13030 13030 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Operophtera brumata reovirus;t__ 0 0 0 0 0 0 0 487 487 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Fly Virus 2;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Oat necrotic mottle virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Cripavirus NB-1/2011/HUN;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 13;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__San Miguel sea lion virus 8;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus SEV-gx;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus IME200;t__Acinetobacter phage vB_AbaM_IME200 0 0 0 0 0 0 0 824 824 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Escherichia virus AKFV33;t__ 0 0 0 0 0 250 0 1927 2177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Acinetobacter phage vB_AbaP_Acibel007;t__ 0 0 0 0 0 0 0 853 853 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 9;t__Human papillomavirus type 16 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Hepatovirus A;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Malpais Spring vesiculovirus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Boomer;t__ 0 0 0 0 97 501 0 562 1160 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage CaptainTrips;t__ 0 0 0 0 411 397 0 338 1146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Shayang Fly Virus 2;t__ 0 0 0 0 0 0 0 245 245 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Cellulosimicrobium;s__Cellulosimicrobium cellulans;t__Cellulosimicrobium cellulans J36 36 0 6 17 8 0 0 84883 84950 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 124;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Soybean Putnam virus;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__;g__;s__Sclerotinia sclerotiorum debilitation-associated RNA virus 2;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Avastrovirus;s__Chicken astrovirus;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Zea mosaic virus;t__Iranian johnsongrass mosaic virus 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Ceratobasidium endornavirus B;t__ 0 0 0 0 0 0 0 472 472 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia psittaci;t__Chlamydia psittaci 6BC 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD93;t__ 0 0 0 0 114 270 0 348 732 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan Millipede virus 4;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Human polyomavirus 12;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 5;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Sulfitobacter phage pCB2047-C;t__ 0 0 0 0 0 0 0 818 818 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Sclerophthora macrospora virus A;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Felixo1virus;s__Erwinia virus Ea214;t__Erwinia phage phiEa21-4 0 0 0 0 0 0 0 1691 1691 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__Alphamesonivirus;s__Alphamesonivirus 1;t__Cavally virus 0 0 0 0 0 0 1 401 402 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage SiSi;t__ 0 0 0 0 325 299 0 501 1125 k__Viruses;p__unclassified bacterial viruses;c__Pseudomonas phage vB_PaeM_MAG1;o__;f__;g__;s__;t__ 1 0 0 0 0 0 0 1890 1891 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P144;t__Propionibacterium phage P14.4 0 0 0 0 5 73 0 516 594 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Estave1;t__ 0 0 0 0 287 79 0 848 1214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__MW polyomavirus;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Megrivirus;s__Goose megrivirus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tin2virus;s__Tsukamurella virus TIN3;t__Tsukamurella phage TIN3 0 0 0 0 0 11 0 1514 1525 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Alstroemeria virus x;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 10;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Citrus yellow mosaic virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Parana mammarenavirus;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Sweet potato chlorotic stunt virus;t__ 0 0 0 0 0 0 0 350 350 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Bafinivirus;s__White bream virus;t__ 0 0 0 0 0 0 0 533 533 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai Nido-like virus 2;t__ 0 0 0 0 0 0 0 492 492 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Lilac;t__ 0 0 0 0 1237 88 0 200 1525 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Xanthomonas phage vB_XveM_DIBBI;t__ 0 0 0 0 0 0 0 999 999 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Human papillomavirus KC5;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Serratia phage phiMAM1;t__ 0 0 0 0 0 0 0 3156 3156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Melandrium yellow fleck virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ab18virus;s__Pseudomonas virus Ab18;t__Pseudomonas phage vB_PaeS_PAO1_Ab18 0 0 0 0 0 0 0 1130 1130 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Carmotetraviridae;g__Alphacarmotetravirus;s__Providence virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__NL63-related bat coronavirus;t__ 0 0 0 0 0 0 0 566 566 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 19;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kpp10virus;s__Pseudomonas virus KPP10;t__Pseudomonas phage KPP10 0 0 0 0 9 0 0 1757 1766 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Yellow tailflower mild mottle virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan poty-like virus 1;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Phasey bean mild yellows virus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Caprine arthritis encephalitis virus;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 63;t__ 0 0 0 0 0 2 0 175 177 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Avihepatovirus;s__Avihepatovirus A;t__Duck hepatitis A virus 1 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Acinetobacter phage phiAB6;t__ 0 0 0 0 218 0 0 593 811 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ledantevirus;s__Kumasi ledantevirus;t__Kumasi rhabdovirus 0 0 0 0 0 0 0 221 221 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0131-2;o__;f__;g__;s__;t__ 1 108 0 0 0 0 0 582 691 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Chicken picornavirus 1;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__G7cvirus;s__Escherichia virus ECBP1;t__Escherichia phage ECBP1 0 0 0 0 0 58 0 1339 1397 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Vibrio phage N4;t__ 0 0 0 0 0 29 0 740 769 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 14;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Canna yellow mottle virus;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 47;t__ 0 0 0 0 0 0 0 164 164 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis fribergensis;t__ 0 0 0 0 0 0 0 3941 4171 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Kineosporiales;f__Kineosporiaceae;g__Kineococcus;s__Kineococcus radiotolerans;t__Kineococcus radiotolerans SRS30216 = ATCC BAA-149 0 0 0 0 0 0 0 3891 3907 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 91;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Sodalis virus SO1;t__Sodalis phage SO1 0 0 0 0 0 5 0 898 903 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Mosquito Virus 9;t__ 0 0 0 0 0 0 0 274 274 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Santa barbara virus;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Microcystis aeruginosa phage Ma-LMM01;t__ 0 0 0 0 0 0 0 3242 3242 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 12;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage 44AHJD;t__ 0 0 0 0 0 318 0 17 335 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Danaus plexippus plexippus iteravirus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 2;t__Casphalia extranea densovirus 0 0 0 0 0 0 0 100 100 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfurellales;f__Desulfurellaceae;g__Desulfurella;s__Desulfurella acetivorans;t__Desulfurella acetivorans A63 0 0 0 0 0 0 0 69 70 k__Viruses;p__dsDNA viruses, no RNA stage;c__Tectiviridae;o__;f__;g__Tectivirus;s__Bacillus phage GIL16c;t__ 0 0 0 0 0 2 0 294 296 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Miniopterus schreibersii polyomavirus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Cronobacter phage vB_CsaP_GAP52;t__ 0 0 0 0 0 0 0 1532 1532 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Pseudarthrobacter;s__Pseudarthrobacter sulfonivorans;t__ 0 0 0 0 0 0 0 6 247 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Rhopalosiphum padi virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Vibrio phage phi 3;t__ 0 0 0 0 0 0 0 2322 2322 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Lactobacillus phage CL1;t__ 0 0 0 0 0 399 0 390 789 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 117;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H3N2 subtype 0 0 0 0 0 0 0 258 258 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betanecrovirus;s__Beet black scorch virus;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Clostridium phage phiCPV4;t__ 0 0 0 0 0 135 0 224 359 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 13;t__Human papillomavirus type 54 0 0 0 0 0 0 0 155 155 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Soymovirus;s__Water chestnut soymovirus 1;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 21;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Umatilla virus;t__ 0 0 0 0 0 0 0 371 371 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 11;t__Human papillomavirus type 34 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Ceratobasidium endornavirus G;t__ 0 0 0 0 0 0 0 385 385 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Baboon endogenous virus;t__Baboon endogenous virus strain M7 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Lambdapapillomavirus 1;t__Felis domesticus papillomavirus type 1 0 0 0 0 0 0 0 165 165 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__G4microvirus;s__Escherichia virus G4;t__Enterobacteria phage ID18 sensu lato 0 0 0 0 0 0 0 109 109 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Botryosphaeria dothidea victorivirus 1;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Thiafora orthonairovirus;t__Erve virus 0 0 0 0 0 0 0 354 354 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tomato brown rugose fruit virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Swine enteric coronavirus;t__ 0 0 0 0 0 2 0 560 562 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Arsenicicoccus;s__Arsenicicoccus sp. oral taxon 190;t__ 1 0 13 21 0 0 0 70470 70505 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Tsukamurellaceae;g__Tsukamurella;s__Tsukamurella sp. 1534;t__ 4 0 6 34 0 34 0 89560 89638 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Phycicoccus;s__Phycicoccus jejuensis;t__ 0 0 25 6 1 0 0 79498 79530 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__Bacillarnavirus;s__Asterionellopsis glacialis RNA virus;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__;g__;s__Pepper virus A;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae phi-CA82;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei coleoptera virus 2;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus SU503;t__Klebsiella phage vB_KpnP_SU503 0 0 0 0 0 65 0 811 876 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian adenovirus B;t__Cynomolgus adenovirus 1 0 0 0 0 0 60 0 651 711 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia Qinvirus-like virus 1;t__ 0 0 0 0 0 0 0 162 162 k__Bacteria;p__Actinobacteria;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Ilumatobacter;s__Ilumatobacter coccineus;t__Ilumatobacter coccineus YM16-304 0 0 0 0 1 26 0 96576 96603 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tm4virus;s__Mycobacterium phage CrimD;t__ 0 0 0 0 0 54 0 1141 1195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Dinoroseobacter phage DFL12phi1;t__ 0 0 0 0 0 0 0 1500 1500 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Porcine astrovirus 4;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Vp5virus;s__Vibrio virus VP5;t__Vibrio phage VP5 0 0 0 0 0 0 0 795 795 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Lauchelly;t__Propionibacterium phage Lauchelly 0 0 0 0 10 28 0 552 590 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Sesavirus CSL10538;t__ 0 0 0 0 0 0 0 100 100 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces xiamenensis;t__ 0 0 5 0 0 0 0 119223 119228 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium luticocti;t__Microbacterium luticocti DSM 19459 0 0 1 43 10 18 0 62148 62220 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora paurometabolica;t__Saccharomonospora paurometabolica YIM 90007 0 0 2 0 12 15 0 89508 89537 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Caprine kobuvirus;t__ 0 0 0 0 0 0 0 166 166 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Solirubrobacter;s__Solirubrobacter sp. URHD0082;t__ 1 1 0 6 0 20 0 132688 132716 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Isoptericola;s__Isoptericola variabilis;t__Isoptericola variabilis 225 11 0 36 40 30 0 0 66037 66154 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 6;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Watermelon mosaic virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__;s__Meno virus;t__ 0 0 0 0 0 0 0 399 399 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Paraoerskovia;s__Paraoerskovia marina;t__Paraoerskovia marina DSM 21750 4 0 8 18 6 0 0 58892 58928 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Caulobacter phage CcrColossus;t__ 0 0 0 0 0 0 0 5599 5599 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium trichothecenolyticum;t__ 0 0 0 0 10 64 0 90334 90408 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__European bat 1 lyssavirus;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bovine polyomavirus 3;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudoalteromonas phage RIO-1;t__ 0 0 0 0 0 0 0 877 877 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 85;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Fusarium graminearum hypovirus 1;t__ 0 0 0 0 0 0 0 260 260 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL025M00;t__Propionibacterium phage PHL025M00 0 0 0 0 15 122 0 452 589 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcepmuvirus;s__Burkholderia virus phiE255;t__ 0 0 0 0 0 0 0 748 748 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Ebolavirus;s__Tai Forest ebolavirus;t__ 0 0 0 0 0 0 0 378 378 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tm4virus;s__Mycobacterium virus TM4;t__Mycobacterium phage TM4 0 0 0 0 0 0 0 1055 1055 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P100A;t__Propionibacterium phage P100_A 0 0 0 0 0 1 0 589 590 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 59;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Gibbon ape leukemia virus;t__ 0 0 0 0 0 0 0 161 161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage ICP2;t__ 0 0 0 0 0 0 0 993 993 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Rosavirus;s__Rosavirus C;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 11;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Thermoanaerobacterium phage THSA-485A;t__ 0 0 0 0 0 0 0 838 838 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Dromedary astrovirus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Tupavirus;s__Tupaia tupavirus;t__Tupaia virus 0 0 0 0 0 0 0 228 228 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 2;t__ 0 0 0 0 0 0 0 143 143 k__Viruses;p__dsRNA viruses;c__Cystoviridae;o__;f__;g__;s__Pseudomonas phage phi8;t__ 0 0 0 0 0 0 0 296 296 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Meaban virus;t__ 0 0 0 0 0 0 0 205 205 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Dermacoccus;s__Dermacoccus sp. PE3;t__ 0 0 4 9 0 0 0 61463 61476 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 24;t__Human papillomavirus 178 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 8;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum yellow vein betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 2;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__African oil palm ringspot virus;t__ 0 0 0 0 0 0 0 155 155 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Tetrasphaera;s__Tetrasphaera elongata;t__Tetrasphaera elongata Lp2 0 0 10 67 24 73 0 62645 62819 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-34;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum leaf curl Cameroon virus;t__ 10 0 0 0 0 3 0 42 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Coccinia mosaic Tamil Nadu virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Plantago mottle virus;t__ 0 0 0 0 0 0 0 123 123 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium paraoxydans;t__Microbacterium paraoxydans DH1b 0 0 5 1 9 160 0 72089 72264 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 5;t__Human papillomavirus type 26 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Bovine respirovirus 3;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyopipapillomavirus;s__Dyopipapillomavirus 1;t__Phocoena phocoena papillomavirus 4 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Orthopneumovirus;s__Murine orthopneumovirus;t__Pneumonia virus of mice J3666 0 0 0 0 0 0 0 297 297 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 52;t__ 0 0 0 0 0 0 0 251 251 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 6;t__Human papillomavirus type 108 0 0 0 0 0 0 0 142 142 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__Macaque simian foamy virus;t__ 0 0 0 0 0 0 0 259 259 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Lindernia anagallis yellow vein virus satellite DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides insulae;t__Nocardioides insulae DSM 17944 0 0 3 0 0 12 0 81147 81162 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus GyV8;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C5virus;s__Lactobacillus virus c5;t__ 0 0 0 0 0 0 0 636 636 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Shigella virus AG3;t__Shigella phage Ag3 0 0 0 0 0 0 0 3160 3160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Vanilla distortion mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Clostridium phage phiZP2;t__ 0 0 0 0 0 6 0 355 361 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Erythroparvovirus;s__Human erythrovirus V9;t__ 0 0 0 0 0 0 0 100 100 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces roseochromogenus;t__Streptomyces roseochromogenus subsp. oscitans 0 0 0 0 0 0 0 2001 2357 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cronusvirus;s__Rhodobacter virus RcCronus;t__Rhodobacter phage RcRhea 0 0 0 0 0 0 0 721 721 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuchan romanomermis nematode virus 1;t__ 0 0 0 0 0 0 0 299 299 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Uriurana virus;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Sweet potato chlorotic fleck virus;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 7;t__Human papillomavirus type 134 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Broome virus;t__ 0 0 0 0 0 0 0 436 436 k__Viruses;p__unclassified bacterial viruses;c__Rhizobium phage RHEph10;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 2300 2300 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H2N2 subtype 0 0 0 0 0 0 1 254 255 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H1N1 subtype 0 0 0 0 0 0 0 259 259 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Goose aviadenovirus A;t__Goose adenovirus 4 0 0 0 0 0 0 0 867 867 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus Abp1;t__Acinetobacter phage Abp1 0 0 0 0 0 59 0 784 843 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 2;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Leuconostoc phage phiLN6B;t__ 0 0 0 0 0 353 0 161 514 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter;s__Roseobacter denitrificans;t__Roseobacter denitrificans OCh 114 0 0 0 0 0 0 0 3957 3957 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Raspberry leaf mottle virus;t__ 0 0 0 0 0 0 0 349 349 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 29;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Bat Hp-betacoronavirus/Zhejiang2013;t__ 0 0 0 0 0 0 0 629 629 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Fabavirus;s__Lamium mild mosaic virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 5;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Bujaru phlebovirus;t__Munguba virus 0 0 0 0 0 0 0 254 254 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 55;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage phiA1122;t__ 0 0 0 0 0 29 0 722 751 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Ferret papillomavirus;t__ 0 0 0 0 0 0 0 159 159 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora aurantiaca;t__Micromonospora aurantiaca ATCC 27029 0 0 17 0 156 69 0 140269 140511 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Calla lily latent virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Acerodon celebensis polyomavirus 2;t__Bat polyomavirus 6a 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Escherichia virus HK022;t__ 0 0 0 36 25 472 0 266 815 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Lettuce yellow mottle cytorhabdovirus;t__Lettuce yellow mottle virus 0 0 0 0 0 0 0 258 258 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Quaranjavirus;s__Wellfleet Bay virus;t__ 0 0 0 0 0 0 0 228 228 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Beutenbergiaceae;g__Beutenbergia;s__Beutenbergia cavernae;t__Beutenbergia cavernae DSM 12333 3 0 6 12 0 0 0 93362 93383 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 2;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Acerodon celebensis polyomavirus 1;t__Bat polyomavirus 5b 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Herpesvirales;o__;f__Herpesviridae;g__Simplexvirus;s__Saimiriine alphaherpesvirus 1;t__ 0 0 0 0 0 0 0 3134 3134 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Phycicoccus;s__Phycicoccus sp. Root563;t__ 0 0 9 19 12 63 0 83018 83121 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium azadirachtae;t__ 0 0 0 0 6 53 0 84731 84790 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Gossypium punctatum mild leaf curl virus;t__ 0 0 0 0 0 3 0 104 107 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Simian T-cell lymphotropic virus 6;t__ 0 0 0 0 0 0 0 178 178 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus durus;t__ 0 0 0 0 0 0 0 303 303 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 48;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Desmodus rotundus parvovirus;t__ 0 0 0 0 0 0 0 85 85 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Roseomonas;s__Roseomonas gilardii;t__ 0 0 2 0 0 0 0 7497 7636 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Citrobacter phage phiCFP-1;t__ 0 0 0 0 183 0 0 589 772 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium sp. Root472D3;t__ 1 0 6 0 1 33 0 74063 74104 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Human endogenous retrovirus K;t__Human endogenous retrovirus K113 0 0 0 0 0 0 0 189 189 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Rose leaf curl betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 21;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Clerodendron yellow mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 42;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Brevidensovirus;s__Dipteran brevidensovirus 2;t__Aedes albopictus densovirus 2 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Human respirovirus 3;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Keterah orthonairovirus;t__Keterrah virus 0 0 0 0 0 0 0 384 384 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Sanxia Water Strider Virus 1;t__ 0 0 0 0 0 0 0 368 368 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Grass carp rhabdovirus V76;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Porcine mastadenovirus A;t__Porcine adenovirus 3 0 0 0 0 0 0 0 681 681 k__Viruses;p__unclassified viruses;c__Cordoba virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ephemerovirus;s__Yata ephemerovirus;t__Yata virus 0 0 0 0 0 0 0 289 289 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__White sucker hepatitis B virus;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Bat iflavirus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Bovine respirovirus 3;t__Caprine parainfluenza virus 3 0 0 0 0 0 0 0 312 312 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Tomato yellow mottle-associated virus;t__ 0 0 0 0 0 0 0 267 267 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Rousettus bat coronavirus HKU9;t__ 0 0 0 0 0 0 0 582 582 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei mosquito virus 1;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Simian torque teno virus 30;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Sclerotinia sclerotiorum endornavirus-1;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Aravan lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 45;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Wigeon coronavirus HKU20;t__ 0 0 0 0 0 0 0 524 524 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Vervet monkey polyomavirus 3;t__ 0 0 0 0 0 12 0 89 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 87;t__ 0 0 0 0 0 0 0 228 228 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Raphanus sativus cryptic virus 2;t__ 0 0 0 0 0 0 0 90 90 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium nuruki;t__Corynebacterium nuruki S6-4 0 0 1 3 0 15 0 61981 62000 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T5virus;s__Salmonella virus Shivani;t__Salmonella phage Shivani 0 0 0 1338 10 373 0 680 2401 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Taishun Tick Virus;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Troll4;t__ 0 0 0 0 346 542 0 404 1292 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__Gluconacetobacter;s__Gluconacetobacter diazotrophicus;t__Gluconacetobacter diazotrophicus PA1 5 0 0 0 0 0 0 0 533 549 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage UFV-P2;t__ 0 0 0 0 0 0 0 910 910 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 5;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HHTV-1;t__ 0 0 0 0 0 0 0 982 982 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 9;t__ 0 0 0 0 0 0 0 175 175 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Propionibacterium;s__Propionibacterium freudenreichii;t__Propionibacterium freudenreichii subsp. freudenreichii 42 0 312 1 824 4 0 51672 52983 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 31;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 1;t__ 0 0 0 0 0 0 0 229 229 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Murine respirovirus;t__ 0 0 0 0 0 0 0 307 307 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Babuvirus;s__Banana bunchy top virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 35;t__ 0 0 0 0 0 0 0 197 197 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia sp. EC080619-01;t__ 0 0 27 0 1 157 0 122801 122986 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Human cyclovirus VS5700009;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Perhabdovirus;s__Anguillid perhabdovirus;t__Eel virus European X 0 0 0 0 0 0 0 236 236 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei coleoptera virus 1;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Gentian Kobu-sho-associated virus;t__ 0 0 0 0 0 0 0 455 455 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei dimarhabdovirus virus 2;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Celeribacter phage P12053L;t__ 0 0 0 0 0 0 0 777 777 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Saal;t__ 0 0 0 0 322 185 0 648 1155 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen7786_21;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P104A;t__Propionibacterium phage P104A 0 0 0 0 0 41 0 546 587 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Hepatovirus B;t__Phopivirus 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus PD6A3;t__Acinetobacter phage vB_AbaP_PD-6A3 0 0 0 0 18 157 0 656 831 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agrococcus;s__Agrococcus lahaulensis;t__Agrococcus lahaulensis DSM 17612 0 0 15 13 28 0 0 53444 53500 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage vB_PaeP_MAG4;t__ 0 0 0 0 432 0 0 1027 1459 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0031;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 837 837 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 22;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Primula malacoides virus 1;t__Primula malacoides virus China/Mar2007 0 0 0 0 0 0 0 92 92 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Psophocarpus tetragonolobus endornavirus;t__ 0 0 0 0 0 0 0 292 292 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Mycoreovirus;s__Sclerotinia sclerotiorum mycoreovirus 4;t__ 0 0 0 0 0 0 0 477 477 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Blastococcus;s__Candidatus Blastococcus massiliensis;t__Candidatus Blastococcus massiliensis AP3 0 0 18 0 42 50 0 77028 77138 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Donkey orchid virus A;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Cucumber vein yellowing virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage BPS11Q3;t__ 0 0 0 0 106 0 0 769 875 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Gammacoronavirus;s__Avian coronavirus;t__Infectious bronchitis virus 0 0 0 0 0 0 0 552 552 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Yersinia phage phi80-18;t__ 0 0 0 0 0 0 0 841 841 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Nakiwogo virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-4;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Simian torque teno virus 31;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Shuangao insect virus 7;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Butterbur mosaic virus;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Human mastadenovirus E;t__Chimpanzee adenovirus Y25 0 0 0 0 0 0 223 511 734 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus aquaticus;t__Thermus aquaticus Y51MC23 0 0 0 0 0 0 0 3437 3588 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PA1-14;t__ 0 0 0 0 99 12 0 477 588 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Melon yellow spot virus;t__ 0 0 0 0 0 0 0 334 334 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Loktanella phage pCB2051-A;t__ 0 0 0 0 0 0 0 1139 1139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas virus gh1;t__Pseudomonad phage gh-1 0 0 0 0 0 0 0 747 747 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Dicipivirus;s__Cadicivirus A;t__Canine picodicistrovirus 0 0 0 0 0 0 0 175 175 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou channeled applesnail virus 1;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Nupapillomavirus;s__Nupapillomavirus 1;t__Human papillomavirus type 41 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Slow bee paralysis virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus SE2;t__Salmonella phage SE2 0 0 0 0 0 5 0 859 864 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Citrus leaf rugose virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Lunk mammarenavirus;t__Lunk virus NKS-1 0 0 0 0 0 0 0 209 209 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sesarmid crab virus 7;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 15;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 2;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Lettuce virus X;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Sulfolobus monocaudavirus SMV2;t__ 0 0 0 0 0 3 0 933 936 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Cacao yellow vein-banding virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 3;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus PKgoat11/PAK/2009;t__ 0 0 0 0 0 0 0 35 35 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium chubuense;t__Mycobacterium chubuense NBB4 0 0 0 0 0 0 0 14298 15176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 18;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus D;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Norwalk virus;t__Norovirus GII 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus F8;t__Pseudomonas phage F8 0 0 0 0 0 60 0 1260 1320 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus virus Kamchatka 1;t__ 0 0 0 0 0 0 0 347 347 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Cowpea severe mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Emalyn;t__ 0 0 0 0 0 6 0 873 879 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Hepeviridae;g__Piscihepevirus;s__Piscihepevirus A;t__Cutthroat trout virus 0 0 0 0 0 0 0 146 146 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Oceanithermus;s__Oceanithermus profundus;t__Oceanithermus profundus DSM 14977 0 0 0 0 0 0 0 2706 2707 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage K8;t__ 0 0 0 0 1292 65 0 520 1877 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Pronghorn antelope pestivirus;t__ 0 0 0 0 0 0 0 245 245 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Cowpea aphid-borne mosaic virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Escherichia phage CICC 80001;t__ 0 0 0 0 5 15 0 756 776 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Saumarez Reef virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus ALA22;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage IME-EF4;t__ 0 0 0 0 0 53 0 760 813 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Dolphin rhabdovirus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Yuavirus;s__Pseudomonas phage YuA;t__ 0 0 0 0 0 205 0 968 1173 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Amasya cherry disease associated chrysovirus;t__ 0 0 0 0 0 0 0 231 231 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Kimberlium;t__ 0 0 0 0 301 392 0 443 1136 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Job42;t__ 0 0 0 0 414 186 0 592 1192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Scotophilus bat coronavirus 512;t__ 0 0 0 0 0 0 0 564 564 k__Viruses;p__unclassified viruses;c__Fusarium poae alternavirus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GMA6;t__ 0 0 0 0 0 0 0 1666 1666 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Intrasporangium;s__Intrasporangium calvum;t__Intrasporangium calvum DSM 43043 0 0 15 35 29 0 0 80408 80487 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola;s__Marmoricola aequoreus;t__ 0 0 56 0 18 20 0 83097 83191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus PDAB9;t__Acinetobacter phage vB_AbaP_PD-AB9 0 0 0 0 0 20 0 798 818 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Iotapapillomavirus;s__Iotapapillomavirus 1;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Human enterovirus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage DL62;t__ 0 0 0 0 357 40 0 453 850 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Human coronavirus 229E;t__Camel alphacoronavirus 0 0 0 0 0 0 1 546 547 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P1.1;t__Propionibacterium phage P1.1 0 0 0 0 0 78 0 508 586 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__;g__;s__Solirubrobacterales bacterium URHD0059;t__ 0 0 0 110 0 0 0 131312 131422 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 5;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Abelson murine leukemia virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Murine coronavirus;t__Rat coronavirus 0 0 0 0 0 0 17 607 624 k__Viruses;p__unclassified viruses;c__Deer faeces associated circular DNA virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Brevidensovirus;s__Dipteran brevidensovirus 1;t__Aedes albopictus densovirus 0 0 0 0 0 0 0 75 75 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phicbkvirus;s__Caulobacter virus Karma;t__ 0 0 0 0 0 2152 0 2284 4436 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Nocardiaceae;g__Rhodococcus;s__Rhodococcus rhodnii;t__Rhodococcus rhodnii LMG 5362 0 0 1 8 1 23 0 87385 87418 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Biomphalaria virus 1;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 114;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 23;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 18;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Strawberry mild yellow edge virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus Er/SZAL6/HUN/2011;t__ 0 0 0 0 0 0 0 140 140 k__BacteriaPlasmid;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Isosphaeraceae;g__Isosphaera;s__Isosphaera pallida;t__Isosphaera pallida ATCC 43644 0 0 0 0 0 0 0 1126 1126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Pseudomonas phage YH6;t__ 0 0 0 0 315 28 0 1117 1460 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Clover yellow vein virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan cricket virus 2;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Betaendornavirus;s__Sclerotinia sclerotiorum betaendornavirus 1;t__Sclerotinia sclerotiorum endornavirus 2 0 0 0 0 0 0 0 210 210 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-38;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Konjac mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Betacoronavirus;s__Pipistrellus bat coronavirus HKU5;t__ 0 0 0 0 0 0 0 609 609 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Pepe;t__ 0 0 0 0 267 314 0 429 1010 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Marine RNA virus SOG;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia phage KS5;t__ 0 0 0 0 0 0 0 744 744 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agromyces;s__Agromyces sp. Leaf222;t__ 0 0 1 0 43 42 0 88468 88554 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__C2virus;s__Lactococcus phage M6165;t__ 0 0 0 0 0 1 0 442 443 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Acinetobacter phage vB_AbaM_phiAbaA1;t__ 0 0 0 0 0 0 0 2098 2098 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Tomato spotted wilt tospovirus;t__Tomato spotted wilt virus 0 0 0 0 0 0 0 328 328 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Bacillus phage MG-B1;t__ 0 0 0 0 0 0 0 543 543 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Goose paramyxovirus SF02;t__ 0 0 0 0 0 0 0 303 303 k__Viruses;p__unclassified bacterial viruses;c__Salmonella phage 64795_sal3;o__;f__;g__;s__;t__ 6 0 0 0 0 0 0 900 906 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cardiovirus;s__Cardiovirus B;t__Theilovirus 0 0 0 0 0 0 0 162 162 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Bxz1 0 0 0 0 134 0 2477 511 3122 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Squirty;t__ 0 0 0 0 186 222 0 797 1205 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia symbiont of Datisca glomerata;t__ 0 0 0 0 0 0 0 354 354 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 116;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD5;t__ 0 0 0 0 102 131 0 521 754 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 9;t__Human papillomavirus 116 0 0 0 0 0 0 0 143 143 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Hades;t__ 0 0 0 0 189 294 0 616 1099 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL060L00;t__Propionibacterium phage PHL060L00 0 0 0 0 0 122 0 468 590 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 3;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Negevirus;s__Brejeira virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__BtMr-AlphaCoV/SAX2011;t__ 0 0 0 0 0 0 0 558 558 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Holosporales;f__Candidatus Paracaedibacteraceae;g__Candidatus Paracaedibacter;s__Candidatus Paracaedibacter acanthamoebae;t__ 0 0 0 0 0 0 0 301 301 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Mischivirus;s__Mischivirus C;t__African bat icavirus PREDICT-06105 0 0 0 0 0 0 0 161 161 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfuromonadales;f__Geobacteraceae;g__Geobacter;s__Geobacter metallireducens;t__Geobacter metallireducens GS-15 0 0 0 0 0 0 0 251 275 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 3;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Triatovirus;s__Homalodisca coagulata virus-1;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Broad bean true mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage XFactor;t__ 0 0 0 1 313 401 0 397 1112 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Cali 0 0 0 5 122 0 1524 1456 3107 k__Viruses;p__unclassified viruses;c__Black grass cryptic virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Aydin virus;t__Pestivirus strain Aydin/04-TR 0 0 0 0 0 0 0 245 245 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces leeuwenhoekii;t__ 0 0 0 0 0 1 0 4357 4370 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Bivalve RNA virus G2;t__ 0 0 0 0 0 0 0 161 161 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Erbovirus;s__Erbovirus A;t__Equine rhinitis B virus 1 0 0 0 0 0 0 0 176 176 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak MY virus;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Rose yellow mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyochipapillomavirus;s__Dyochipapillomavirus 1;t__Equus asinus papillomavirus 1 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Pitaya virus X;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Horseradish latent virus;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Gastropod associated circular ssDNA virus;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage SoilAssassin;t__ 0 0 0 0 0 0 0 957 957 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 29;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Passeriform 1 bornavirus;t__Canary bornavirus 3 0 0 0 0 0 0 0 178 178 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces coelicolor;t__Streptomyces coelicolor A3(2) 0 0 0 0 0 0 0 7642 7744 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium marinum;t__Mycobacterium marinum E11 0 0 0 0 0 0 0 2284 2284 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Nounane virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz24virus;s__Pseudomonas phage PaP3;t__ 0 0 0 0 0 0 0 910 910 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Aedes flavivirus;t__ 0 0 0 0 0 0 0 221 221 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria kristinae;t__ 8 0 6 133 0 120 0 45370 45637 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Bromus catharticus striate mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage mEp237;t__ 0 0 0 0 6 247 0 634 887 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Plantago asiatica mosaic virus;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__Hepatitis C virus genotype 2 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kpp25virus;s__Pseudomonas virus KPP25;t__Pseudomonas phage KPP25 0 0 0 0 0 0 0 1282 1282 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agromyces;s__Agromyces subbeticus;t__Agromyces subbeticus DSM 16689 0 0 0 2 36 0 0 85979 86017 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 8;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Bobi;t__ 0 0 0 0 453 387 0 343 1183 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage Colbert 0 0 0 0 0 758 434 163 1355 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Deftia phage phiW-14;t__ 0 0 0 0 0 0 0 3149 3149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus K244;t__Klebsiella phage NTUH-K2044-K1-1 0 0 0 0 0 6 0 871 877 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage Phi-S1;t__ 0 0 0 0 0 8 0 795 803 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage phiIBB-PF7A;t__ 0 0 0 0 0 0 0 819 819 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola;s__Marmoricola sp. Leaf446;t__ 0 0 10 0 27 23 0 76102 76162 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sparkdehlily;t__ 0 0 0 1 288 438 0 398 1125 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. No. 7;t__ 0 0 0 0 0 0 0 3449 4576 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Alicycliphilus;s__Alicycliphilus denitrificans;t__Alicycliphilus denitrificans K601 0 0 0 0 0 0 0 1390 1509 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Dickeya phage RC-2014;t__ 0 0 0 0 15 0 0 3091 3106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 7;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Pseudomonas phage YH30;t__ 0 0 0 0 0 0 0 1443 1443 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Aquareovirus;s__Etheostoma fonticola aquareovirus;t__ 0 0 0 0 0 0 0 458 458 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Stenotrophomonas phage Smp131;t__ 0 0 0 0 0 0 0 670 670 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage vB_Pae_PS44;t__ 0 0 0 0 881 0 0 496 1377 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Megrivirus;s__Duck megrivirus;t__ 0 0 0 0 0 0 0 193 193 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus obscurus;t__Geodermatophilus obscurus DSM 43160 0 0 33 0 81 0 0 106335 106449 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Kalanchoe top-spotting virus;t__ 0 0 0 0 0 0 0 151 151 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. J54;t__ 0 0 67 0 53 23 0 94771 94914 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Maize yellow dwarf virus-RMV;t__ 0 0 0 0 0 0 0 112 112 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Siadenovirus;s__Raptor siadenovirus A;t__Raptor adenovirus 1 0 0 0 0 0 0 0 525 525 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces viridifaciens;t__ 0 0 216 0 0 236 0 155301 155753 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Cerasum;t__ 0 0 0 0 327 711 0 34 1072 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__;s__Geodermatophilaceae bacterium URHB0062;t__ 0 0 14 0 34 0 0 101762 101810 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage Pf-10;t__ 0 0 0 0 0 77 0 706 783 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage phiPSA2;t__ 0 0 0 0 0 225 0 584 809 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GTE5;t__ 0 0 0 0 0 25 0 1291 1316 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage SF1;t__ 0 0 0 0 0 0 0 862 862 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Salmonella phage SEN1;t__ 0 0 0 1 0 203 0 390 594 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hermit crab virus 3;t__ 0 0 0 0 0 0 0 259 259 k__Viruses;p__unclassified bacterial viruses;c__Streptococcus phage phiARI0468-2;o__;f__;g__;s__;t__ 22 619 0 0 0 0 0 202 843 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak virus;t__Banana streak virus Acuminata Yunnan 0 0 0 0 0 0 0 154 154 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Clover yellow mosaic virus;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Sclerotinia sclerotiorum hypovirus 2;t__ 0 0 0 0 0 0 0 291 291 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei leech virus 3;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei hepe-like virus 3;t__ 0 0 0 0 0 0 0 154 154 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Propionibacteriaceae;g__Aestuariimicrobium;s__Aestuariimicrobium kwangyangense;t__Aestuariimicrobium kwangyangense DSM 21549 2 0 2 0 8 0 0 59782 59794 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage First;t__ 0 0 0 0 1 105 0 954 1060 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage 20ES;t__ 0 0 0 0 2 704 0 356 1062 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Achromobacter phage phiAxp-3;t__ 0 0 0 0 0 0 0 1448 1448 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas bogoriensis;t__Cellulomonas bogoriensis 69B4 = DSM 16987 5 0 6 5 0 1 0 62655 62672 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis sp. 113P3;t__ 0 0 0 0 0 0 0 3712 4868 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Quink;t__ 0 0 0 0 1324 88 0 119 1531 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Fishburnevirus;s__Mycobacterium virus Donovan;t__Mycobacterium phage Donovan 0 0 0 0 43 476 0 424 943 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bcep22virus;s__Burkholderia virus Bcepmigl;t__ 0 0 0 0 0 62 0 1197 1259 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage Pops 0 0 0 0 1 556 192 618 1367 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__;s__Haloarcula californiae icosahedral virus 1;t__ 0 0 0 0 0 0 0 626 626 k__Viruses;p__unclassified viruses;c__Bradson virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Cabrinians;t__ 0 0 0 0 294 526 0 313 1133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Florinda;t__ 0 0 0 0 210 276 0 702 1188 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 12;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 2;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sipunculid worm virus 5;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei polero-like virus 2;t__ 0 0 0 0 0 0 0 121 121 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces collinus;t__Streptomyces collinus Tu 365 0 0 0 0 0 0 0 2084 2084 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Titanvirus;s__Rhodobacter virus RcTitan;t__Rhodobacter phage RcTitan 0 0 0 0 0 0 0 889 889 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Camponotus yamaokai virus;t__ 0 0 0 0 0 0 0 114 114 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Modestobacter;s__Modestobacter caceresii;t__ 0 0 15 0 22 76 0 98524 98637 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Septima3virus;s__Pseudomonas virus Ab26;t__Pseudomonas phage vB_PaeS_SCH_Ab26 0 0 0 0 57 172 0 632 861 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter capsulatus;t__Rhodobacter capsulatus SB 1003 0 0 0 0 0 0 0 2650 2659 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Chivirus;s__Salmonella phage Chi;t__ 0 0 0 0 0 0 0 1191 1191 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Leifsonia;s__Leifsonia aquatica;t__Leifsonia aquatica ATCC 14665 0 0 2 3 43 0 0 82608 82656 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Ustilaginoidea virens RNA virus 3;t__ 0 0 0 0 0 0 0 101 101 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis terrae;t__Sphingopyxis terrae NBRC 15098 0 0 0 0 0 0 0 86 86 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Kpp10virus;s__Pseudomonas virus PAKP3;t__Pseudomonas phage PAK_P5 0 0 0 0 0 537 0 1225 1762 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Mufasa;t__ 0 0 0 0 78 147 0 936 1161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Prtbvirus;s__Brucella virus Pr;t__Brucella phage Pr 0 0 0 0 0 0 0 765 765 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 54;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage MP22;t__ 0 0 0 0 655 6 0 67 728 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Platyrrhini mastadenovirus A;t__Titi monkey adenovirus ECC-2011 0 0 0 0 0 0 0 736 736 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Aeromonas phage pAh6-C;t__ 0 0 0 0 0 0 0 1074 1074 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Middelburg virus;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__F116virus;s__Pseudomonas phage F116;t__ 0 0 0 0 0 0 0 1303 1303 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhizobium phage vB_RleS_L338C;t__ 0 0 0 0 0 0 0 2191 2191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Yersinia phage vB_YenP_AP10;t__ 0 0 0 0 0 0 0 784 784 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 3;t__ 0 0 0 0 0 0 0 188 188 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces viridifaciens;t__ 0 0 0 0 0 0 0 33761 34144 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium maris;t__Corynebacterium maris DSM 45190 0 0 0 0 0 2 0 863 919 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas cellasea;t__Cellulomonas cellasea DSM 20118 0 0 2 6 3 27 0 77840 77878 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che9cvirus;s__Mycobacterium phage Babsiella;t__ 0 0 0 0 157 68 0 743 968 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Papaya mosaic virus;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 17;t__Human papillomavirus type 144 0 0 0 0 0 0 0 145 145 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 20;t__ 0 0 0 0 0 0 0 167 167 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. CF8;t__ 0 0 38 0 14 23 0 83706 83781 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage S-RIP2;t__ 0 0 0 0 0 0 0 914 914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas virus LKA1;t__Pseudomonas phage LKA1 0 0 0 0 0 0 0 831 831 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Che8;t__ 0 0 0 0 33 59 0 1097 1189 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Methylibium;s__Methylibium petroleiphilum;t__Methylibium petroleiphilum PM1 0 0 0 0 0 0 0 11174 11988 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia permutotetra-like virus 1;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Daenerys;t__ 0 0 0 0 583 207 0 370 1160 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Bignuzvirus;s__Mycobacterium virus Bignuz;t__Mycobacterium phage BigNuz 0 0 0 0 0 0 0 979 979 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;s__Actinomyces polynesiensis;t__ 0 0 46 0 1 2 0 56928 56977 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 16;t__Human papillomavirus type 137 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Erwinia phage vB_EamP-L1;t__ 0 0 0 0 0 0 0 785 785 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Spumavirus;s__Feline foamy virus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Pneumovirus;s__Respiratory syncytial virus;t__ 0 0 0 0 0 0 0 303 303 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 8;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Pakistan betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pakpunavirus;s__Pseudomonas virus JG004;t__Pseudomonas phage JG004 0 0 0 0 0 957 0 903 1860 k__Viruses;p__unclassified RNA viruses;c__Nesidiocoris tenuis virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 2;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Torradovirus;s__Tomato torrado virus;t__ 0 0 0 0 0 0 0 262 262 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus LBL3;t__Pseudomonas phage LBL3 0 0 0 0 0 411 0 877 1288 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Conexibacteraceae;g__Conexibacter;s__Conexibacter woesei;t__Conexibacter woesei DSM 14684 0 0 0 1 0 0 0 127186 127187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Rymovirus;s__Agropyron mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Tetraselmis viridis virus S1;t__ 0 0 0 0 0 0 0 528 528 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak UL virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage vB_YenP_AP5;t__ 0 0 0 0 27 170 0 575 772 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. Root166;t__ 0 0 0 1 14 104 0 69071 69190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Dori;t__ 0 0 0 0 0 3 0 1289 1292 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Lassa mammarenavirus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage KatherineG;t__ 0 0 0 0 295 555 0 203 1053 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bandicoot papillomatosis carcinomatosis virus type 2;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Porcine mastadenovirus C;t__Porcine adenovirus 5 0 0 0 0 0 0 0 652 652 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Porcine mastadenovirus C;t__ 0 0 0 0 0 0 652 0 652 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia jeotgali;t__ 0 0 24 17 8 0 0 58442 58491 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium glyciniphilum;t__Corynebacterium glyciniphilum AJ 3170 0 0 0 0 0 0 0 1141 1168 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Sowbane mosaic virus;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Escherichia phage pro483;t__ 0 0 0 0 0 108 0 476 584 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL150;t__Propionibacterium phage PHL150M00 0 0 0 0 101 6 0 481 588 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HCTV-1;t__ 0 0 0 0 0 0 0 2065 2065 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage MP38;t__ 0 0 0 0 335 41 0 361 737 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Small anellovirus;t__Small anellovirus 2 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Coronavirus HKU15;t__Porcine coronavirus HKU15 0 0 0 0 0 0 0 508 508 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Primate T-lymphotropic virus 2;t__Simian T-lymphotropic virus 2 0 0 0 0 0 0 0 177 177 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora glauca;t__Saccharomonospora glauca K62 0 0 0 0 0 0 0 507 507 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__Alphamesonivirus;s__Alphamesonivirus 1;t__Nam Dinh virus 0 0 0 0 0 0 0 403 403 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas virus phiKMV;t__Pseudomonas phage phiKMV 0 0 0 0 0 0 0 850 850 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Drosophila melanogaster totivirus SW-2009a;t__ 0 0 0 0 0 0 0 135 135 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp. URHE0023;t__ 0 0 7 6 0 26 0 84147 84186 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Porartevirus;s__Rat arterivirus 1;t__ 0 0 0 0 0 0 0 301 301 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium marinum;t__Aeromicrobium marinum DSM 15272 0 0 16 0 6 0 0 61511 61533 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage LM33_P1;t__ 0 0 0 0 59 23 0 697 779 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Kalanchoe latent virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage D29;t__ 0 0 0 0 0 0 0 982 982 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus spindle-shaped virus 2;t__ 0 0 0 0 0 30 0 265 295 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Menghai flavivirus;t__ 0 0 0 0 0 0 0 217 217 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp. CF335;t__ 0 0 0 0 15 115 0 60243 60373 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas fimi;t__Cellulomonas fimi ATCC 484 4 0 14 20 0 113 0 85175 85326 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Norway rat pegivirus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Common moorhen coronavirus HKU21;t__ 0 0 0 0 0 0 0 524 524 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Mink bocavirus;t__ 0 0 0 0 0 0 0 104 104 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Rathayibacter;s__Rathayibacter sp. Leaf185;t__ 1 0 0 1 30 29 0 82035 82096 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 3;t__ 0 0 0 0 0 0 0 178 178 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Kineosporiales;f__Kineosporiaceae;g__Kineococcus;s__Kineococcus radiotolerans;t__Kineococcus radiotolerans SRS30216 = ATCC BAA-149 1 0 36 0 0 0 0 95186 95223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage DrDrey;t__ 0 0 0 0 1295 102 0 150 1547 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces clavuligerus;t__Streptomyces clavuligerus ATCC 27064 0 0 0 0 0 0 13169 22581 35784 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei polero-like virus 1;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage SF3;t__ 0 0 0 0 0 508 0 710 1218 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pectobacterium phage ZF40;t__ 0 0 0 0 0 0 0 969 969 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Eupatorium vein clearing virus;t__ 0 0 0 0 0 0 0 169 169 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Pimelobacter;s__Pimelobacter simplex;t__ 0 0 19 0 27 0 0 112701 112747 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Ilomantsi virus;t__ 0 0 0 0 0 0 0 207 207 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Cellvibrionales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter sp. IMCC21906;t__ 0 0 0 0 0 0 0 253 253 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces rubrolavendulae;t__ 0 0 8 0 0 163 0 130694 130865 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Rhizoctonia cerealis alphaendornavirus 1;t__ 0 0 0 0 0 0 0 349 349 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus E;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 5;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__;s__Macrophomina phaseolina tobamo-like virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage ScottMcG 0 0 0 9 128 58 2725 160 3080 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Klebsiella virus K5;t__Klebsiella phage K5 0 0 0 0 0 108 0 725 833 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Simian retrovirus 8;t__ 0 0 0 0 0 0 0 162 162 k__BacteriaPlasmid;p__Planctomycetes;c__Planctomycetia;o__Planctomycetales;f__Planctomycetaceae;g__Planctopirus;s__Planctopirus limnophila;t__Planctopirus limnophila DSM 3776 0 0 0 0 0 0 0 740 740 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pectobacterium phage Peat1;t__ 0 0 0 4 0 280 0 628 912 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Jobu08;t__ 0 0 0 0 374 0 0 639 1013 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Nyxis;t__ 0 0 0 0 147 0 0 877 1024 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash mild leaf curl virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Canine circovirus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Blattodean ambidensovirus 2;t__Blattella germanica densovirus 1 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden yellow vein virus;t__Sida golden yellow vein virus-[Jamaica:Liguanea2:2008] 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 32;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Mammalian 2 bornavirus;t__Variegated squirrel bornavirus 1 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Nerine virus X;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Impatiens flower break potyvirus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Wasabi mottle virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Enterobacteria phage vB_EcoP_ACG-C91;t__ 0 0 0 0 0 113 0 761 874 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Triatovirus;s__Plautia stali intestine virus;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sheen;t__ 0 0 0 0 0 1 0 1057 1058 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Rhodoferax phage P26218;t__ 0 0 0 0 0 0 0 726 726 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Milly;t__ 0 0 0 0 49 67 0 1048 1164 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Liefievirus;s__Mycobacterium phage Liefie;t__ 0 0 0 0 152 356 0 324 832 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 18;t__ 0 0 0 0 0 0 0 74 74 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Curtobacterium;s__Curtobacterium oceanosedimentum;t__ 2 0 0 1 23 0 0 67067 67093 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcep78virus;s__Xanthomonas virus OP2;t__Xanthomonas phage OP2 0 0 0 0 0 0 0 932 932 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Pseudomonas phage vB_PaeP_Tr60_Ab31;t__ 0 7 0 0 0 0 0 903 910 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halomicrobium;s__Halomicrobium mukohataei;t__Halomicrobium mukohataei DSM 12286 0 0 0 0 0 0 0 4370 4437 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus PB1;t__Pseudomonas phage PB1 0 0 0 0 0 333 0 982 1315 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Nappy;t__Mycobacterium phage Nappy 0 0 0 0 126 2537 0 469 3132 k__Viruses;p__Genomoviridae;c__Gemyduguivirus;o__;f__;g__;s__Dragonfly associated gemyduguivirus 1;t__Dragonfly-associated circular virus 3 0 0 0 0 0 0 0 44 44 k__Bacteria;p__Actinobacteria;c__Nitriliruptoria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;t__Nitriliruptor alkaliphilus DSM 45188 0 0 0 0 0 0 0 111128 111128 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 100;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bcep22virus;s__Burkholderia virus Bcep22;t__ 0 0 0 0 0 0 0 1277 1277 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage CosmicSans;t__ 0 0 0 0 657 0 0 274 931 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL009M11;t__Propionibacterium phage PHL009M11 0 0 0 0 15 151 0 424 590 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Hanko virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 7;t__ 0 0 0 0 0 0 0 98 98 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Soil805;t__ 0 0 10 0 4 82 0 88040 88136 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Vibrio phage vB_VchM-138;t__ 0 0 0 0 0 0 0 889 889 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 4;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Bamaga virus;t__ 0 0 0 0 0 0 0 204 204 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia sp. CCS1;t__ 0 0 0 0 0 0 0 1721 1721 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling toti-like virus 2;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Cypovirus 1;t__ 0 0 0 0 0 0 0 478 478 k__Viruses;p__dsRNA viruses;c__Cystoviridae;o__;f__;g__;s__Pseudomonas phage phi12;t__ 0 0 0 0 0 0 0 259 259 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage OkiRoe;t__ 0 0 0 0 1 491 0 761 1253 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Tacheng Tick Virus 5;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 105;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Xipapillomavirus;s__Xipapillomavirus 2;t__Bos taurus papillomavirus 12 0 0 0 0 0 0 0 143 143 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PLot;t__ 0 0 0 0 0 2 0 1293 1295 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Porcine rubulavirus;t__ 0 0 0 0 0 0 0 303 303 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Fijivirus;s__Fiji disease virus;t__ 0 0 0 0 0 0 0 570 570 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Ferret coronavirus;t__ 0 0 0 0 0 0 0 568 568 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__;s__Citrus vein enation virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Cryphonectria hypovirus 2;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus DL60;t__Pseudomonas phage DL60 0 0 0 0 0 0 0 1322 1322 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Erwinia phage PEp14;t__ 0 0 0 0 0 0 0 1214 1214 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Tacheng tick virus 8;t__ 0 0 0 0 0 0 0 390 390 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Burkholderia phage Bcep176;t__ 0 0 0 0 0 0 0 897 897 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Microbacterium phage vB_MoxS-ISF9;t__ 0 0 0 0 0 0 0 1185 1185 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 3;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Burkholderia phage BcepNazgul;t__ 0 0 0 0 0 0 0 1149 1149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rosebushvirus;s__Mycobacterium virus Rosebush;t__Mycobacterium phage Rosebush 0 0 0 0 2 0 0 1347 1349 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 46;t__ 0 0 0 0 0 0 0 209 209 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia sp. EC080619-01;t__ 0 0 0 0 0 0 0 20427 21130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus KpV41;t__Klebsiella phage KpV41 0 0 0 0 0 208 0 676 884 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__;s__Strawberry mottle virus;t__ 0 0 0 0 0 0 0 251 251 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__East African cassava mosaic virus;t__ 0 0 0 0 0 3 0 106 109 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cabbage leaf curl virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus AN12;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tiger crab virus 1;t__ 0 0 0 0 0 0 0 192 192 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermacoccaceae;g__Dermacoccus;s__Dermacoccus nishinomiyaensis;t__ 0 0 0 0 0 0 0 1662 1692 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Ralstonia phage RSB3;t__ 0 0 0 0 0 0 0 891 891 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia phage KS14;t__ 0 0 0 0 0 0 0 646 646 k__Viruses;p__dsRNA viruses;c__Cystoviridae;o__;f__;g__;s__Pseudomonas phage phi13;t__ 0 0 0 0 0 0 0 269 269 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Cycas necrotic stunt virus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Vp5virus;s__Vibrio virus VP2;t__Vibrio phage VP2 0 0 0 0 0 327 0 470 797 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Patulibacteraceae;g__Patulibacter;s__Patulibacter americanus;t__Patulibacter americanus DSM 16676 0 0 0 0 0 0 0 89353 89353 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage 32HC;t__ 0 0 0 0 0 0 0 1015 1015 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhizobium phage vB_RleM_PPF1;t__ 0 0 0 0 0 0 0 1090 1090 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Terapin;t__ 0 0 0 0 0 0 0 1332 1332 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Aurantimonas phage AmM-1;t__ 0 0 0 0 0 0 0 955 955 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__;s__Southwest baboon virus 1;t__ 0 0 0 0 0 0 0 297 297 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Octadecabacter;s__Octadecabacter temperatus;t__ 0 0 0 0 0 0 0 631 631 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL030;t__Propionibacterium phage PHL030N00 0 0 0 0 88 9 0 491 588 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tm4virus;s__Mycobacterium virus Angelica;t__ 0 0 0 0 0 0 0 1191 1191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Bymovirus;s__Rice necrosis mosaic virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Chaetoceros tenuissimus DNA virus type-II;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage phi3;t__ 0 0 0 0 0 0 0 652 652 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ff47virus;s__Mycobacterium virus Muddy;t__Mycobacterium phage Muddy 0 0 0 0 0 188 0 776 964 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Rhodospirillum;s__Rhodospirillum rubrum;t__Rhodospirillum rubrum ATCC 11170 0 0 0 0 0 0 0 1074 1074 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Soto;t__Mycobacterium phage Vista 0 0 0 0 1 272 859 237 1369 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas;s__Xanthomonas fragariae;t__ 0 0 0 0 0 0 0 997 999 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Trichomonas vaginalis virus dsRNA satellite S1';t__ 0 0 0 0 0 0 0 10 10 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Soto;t__Mycobacterium phage UncleHowie 0 0 0 0 31 344 867 118 1360 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Root682;t__ 0 0 8 0 18 27 0 104215 104268 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Woesvirus;s__Gordonia virus Hotorobo;t__Gordonia phage Hotorobo 0 0 0 0 0 0 0 1539 1539 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Slow loris parvovirus 1;t__ 0 0 0 0 0 0 0 96 96 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Agromyces;s__Agromyces italicus;t__Agromyces italicus DSM 16388 0 0 1 0 37 4 0 74548 74590 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 3;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Xanthomonas citri phage CP2;t__ 0 0 0 0 0 0 0 859 859 k__Bacteria;p__Actinobacteria;c__Thermoleophilia;o__Solirubrobacterales;f__Patulibacteraceae;g__Patulibacter;s__Patulibacter medicamentivorans;t__ 0 0 0 0 0 13 0 101163 101176 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium yellow vein virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Mali virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei macula-like virus 2;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3virus;s__Pseudomonas phage PMG1;t__ 0 0 0 0 2 533 0 545 1080 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Rous sarcoma virus;t__ 0 0 0 0 0 60 0 127 187 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 9;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Melon chlorotic leaf curl virus;t__Melon chlorotic leaf curl virus-[Guatemala] 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Botrexvirus;s__Botrytis virus X;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Mosquito Virus 8;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Passiflora latent carlavirus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 39;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Chenuda virus;t__ 0 0 0 0 0 0 0 340 340 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Ectropis obliqua virus;t__Ectropis obliqua picorna-like virus 0 0 0 0 0 0 0 187 187 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PattyP;t__ 0 0 0 0 187 409 0 445 1041 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus A;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Hk578virus;s__Escherichia virus SSL2009a;t__ 0 0 0 0 0 0 0 897 897 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces cattleya;t__Streptomyces cattleya NRRL 8057 = DSM 46488 0 0 0 0 0 0 0 36080 36250 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp. Leaf369;t__ 0 0 12 0 42 9 0 87299 87362 k__Viruses;p__unclassified bacterial viruses;c__Rhodococcus phage REQ3;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 789 789 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hapunavirus;s__Halomonas phage phiHAP-1;t__ 0 0 0 0 0 0 0 784 784 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Infectious flacherie virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Baminivirus;t__ 0 0 0 0 0 0 0 56 56 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus thermophilus;t__Thermus thermophilus HB8 0 0 0 0 0 0 0 5178 5324 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Alice;t__Mycobacterium phage Alice 0 0 0 8 66 2084 0 910 3068 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Rizal 0 0 0 0 132 0 2463 482 3077 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Bovine astrovirus B18/HK;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Bovine astrovirus B76-2/HK;t__ 0 0 0 0 0 2 0 124 126 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__;s__Comamonadaceae bacterium B1;t__ 0 0 0 0 0 0 0 304 327 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Dermabacteraceae;g__Brachybacterium;s__Brachybacterium paraconglomeratum;t__Brachybacterium paraconglomeratum LC44 3 0 11 84 20 174 0 75305 75597 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bcep22virus;s__Burkholderia virus Bcepil02;t__ 0 0 0 0 0 9 0 1245 1254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che9cvirus;s__Mycobacterium phage Brujita;t__ 0 0 0 0 6 1 0 934 941 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage vB_PaeP_C2-10_Ab22;t__ 0 0 0 0 121 100 0 695 916 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PhatBacter;t__ 0 0 0 0 1223 251 0 50 1524 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe hepe-like virus 2;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bpp1virus;s__Burkholderia virus BcepC6B;t__ 0 0 0 0 0 0 0 848 848 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__Mikumi yellow baboon virus 1;t__ 0 0 0 0 0 0 0 298 298 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Burkholderia phage KS9;t__ 0 0 0 0 0 0 0 797 797 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Vesicular exanthema of swine virus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage BA14;t__ 0 0 0 0 0 141 0 655 796 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__P68virus;s__Staphylococcus phage 66;t__ 0 0 0 0 0 0 0 363 363 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 6;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 5;t__ 0 0 0 0 0 0 0 205 205 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp. HZM;t__ 5 0 7 14 0 81 0 70930 71037 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Helleborus net necrosis virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phi29virus;s__Bacillus virus phi29;t__ 0 0 0 0 0 0 0 385 385 k__Viruses;p__unclassified viruses;c__Fort Crockett virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus spindle-shaped virus 7;t__ 0 0 0 0 0 12 0 340 352 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Carnivore bocaparvovirus 2;t__Canine bocavirus 1 0 0 0 0 0 0 0 108 108 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 21;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Parvovirus NIH-CQV;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Dahlia mosaic virus;t__ 0 0 0 0 0 0 0 158 158 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces vietnamensis;t__ 0 0 0 0 0 1 0 5706 5732 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus F19;t__Klebsiella phage F19 0 0 0 0 0 19 0 856 875 k__Viruses;p__unclassified viruses;c__Egaro virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL092M00;t__Propionibacterium phage PHL092M00 0 0 0 0 5 56 0 524 585 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage QueenBey;t__ 0 0 0 0 12 22 0 552 586 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Long Island tick rhabdovirus;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Bernal13virus;s__Mycobacterium virus Bernal13;t__Mycobacterium phage Bernal13 0 0 0 0 0 0 0 847 847 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Sida yellow vein Vietnam virus satellite DNA beta;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus 141;t__Pseudomonas phage 14-1 0 0 0 0 0 570 0 754 1324 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Seadornavirus;s__Banna virus;t__Banna virus strain JKT-6423 0 0 0 0 0 0 0 392 392 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Mouse astrovirus M-52/USA/2008;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl virus-Pune-associated DNA beta;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei insect virus 2;t__ 0 0 0 0 0 0 0 589 589 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Serinicoccus;s__Serinicoccus profundi;t__Serinicoccus profundi MCCC 1A05965 0 0 25 22 25 0 0 68406 68485 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Ophioviridae;g__Ophiovirus;s__Lettuce ring necrosis virus;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Wheat streak mosaic virus;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Send513virus;s__Mycobacterium virus Papyrus;t__Mycobacterium phage Papyrus 0 0 0 0 0 0 0 1413 1413 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage SEN5;t__ 0 0 0 0 0 0 0 670 670 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Salmonella phage SEN4;t__ 0 0 0 0 670 0 0 0 670 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clavibacter phage CN1A;t__ 0 0 0 0 0 0 0 1135 1135 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Bat coronavirus HKU10;t__Rousettus bat coronavirus HKU10 0 0 0 0 0 0 0 569 569 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 7;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__;s__Rosellinia necatrix endornavirus 1;t__ 0 0 0 0 0 0 0 192 192 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium hydrocarbonoxydans;t__ 0 0 0 0 7 0 0 79048 79055 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Solanum mosaic Bolivia virus;t__ 0 0 0 0 0 0 0 52 52 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Modestobacter;s__Modestobacter sp. Leaf380;t__ 0 0 21 0 194 34 0 95001 95250 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 23;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Vibrio phage KSF-1phi;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Lentivirus;s__Bovine immunodeficiency virus;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unassigned viruses;c__Megabirnaviridae;o__;f__;g__Megabirnavirus;s__Sclerotinia sclerotiorum megabirnavirus 1;t__ 0 0 0 0 0 0 0 332 332 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 15;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cotton leaf curl Gezira alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Alagoas vesiculovirus;t__Vesicular stomatitis Alagoas virus 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Mymonaviridae;g__Sclerotimonavirus;s__Sclerotinia sclerotimonavirus;t__Sclerotinia sclerotiorum negative-stranded RNA virus 1 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Betanodavirus;s__Redspotted grouper nervous necrosis virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Canine morbillivirus;t__ 0 0 0 0 0 0 0 313 313 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia caviae;t__Chlamydophila caviae GPIC 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cucurbit aphid-borne yellows virus;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Leptonychotes weddellii polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Citrobacter phage CR44b;t__ 0 0 0 0 22 0 0 762 784 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 20;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Cacao swollen shoot virus;t__ 0 0 0 0 0 0 0 143 143 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__;s__Chinook salmon nidovirus 1;t__Chinook salmon bafinivirus 0 0 0 0 0 0 0 540 540 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__;s__Black medic leafroll virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyoetapapillomavirus;s__Dyoetapapillomavirus 1;t__Erinaceus europaeus papillomavirus 1 0 0 0 0 0 0 0 165 165 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 1;t__Newcastle disease virus B1 0 0 0 0 0 0 0 303 303 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Kelp fly virus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GTE7;t__ 0 0 0 0 0 0 0 1488 1488 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Ophiostoma mitovirus 3a;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Rinderpest morbillivirus;t__Rinderpest virus (strain Kabete O) 0 0 0 0 0 0 0 317 317 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Human T-lymphotropic virus 4;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Isaria javanica chrysovirus 1;t__ 0 0 0 0 0 0 0 249 249 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 20;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Antarctic picorna-like virus 1;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Burkina Faso astrovirus;t__Human astrovirus BF34 0 0 0 0 0 0 0 131 131 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 9;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 18;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 12;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Blackcurrant reversion virus;t__ 0 0 0 0 0 0 0 280 280 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Husa-like virus KS-2016a;t__Picornavirales Bu-1 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Miniopterus schreibersii polyomavirus 2;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 4;t__ 0 0 0 0 0 0 0 241 241 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Vesiculovirus;s__Yug Bogdanovac vesiculovirus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Citrobacter phage CR8;t__ 0 0 0 0 0 0 0 793 793 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Sulfitobacter phage pCB2047-A;t__ 0 0 0 0 0 0 0 818 818 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Sulfitobacter phage NYA-2014a;t__ 0 0 0 0 0 558 0 283 841 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Yam mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Enterobacteria phage HK140;t__ 0 0 0 30 7 394 0 383 814 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan arthropod virus 3;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Arv1virus;s__Arthrobacter virus ArV1;t__Arthrobacter phage vB_ArtM-ArV1 0 0 0 0 0 0 0 1423 1423 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 23;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 9;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Pepper leaf curl Yunnan virus satellite DNA beta;t__ 0 0 0 0 0 1 0 22 23 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rer2virus;s__Rhodococcus virus RER2;t__Rhodococcus phage RER2 0 0 0 0 0 0 0 931 931 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Proteus phage vB_PmiP_Pm5460;t__ 0 0 0 0 224 0 0 667 891 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Human cosavirus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Whataroa virus;t__ 0 0 0 0 0 0 0 232 232 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan pillworm virus 1;t__ 0 0 0 0 0 0 0 413 413 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Ampivirus;s__Ampivirus A;t__Ampivirus A1 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Torque teno Tadarida brasiliensis virus;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__East African cassava mosaic Malawi virus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl China virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 14;t__ 0 0 0 0 0 0 0 60 60 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Ammonifex;s__Ammonifex degensii;t__Ammonifex degensii KC4 0 0 0 0 0 0 0 547 556 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper yellow leaf curl Thailand virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Croton yellow vein mosaic betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 4;t__ 0 0 0 0 0 0 0 276 276 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 4;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Pteropine orthoreovirus;t__Melaka orthoreovirus 0 0 0 0 0 0 0 450 450 k__Viruses;p__unclassified viruses;c__Burke-Gilman virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 200 200 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium callunae;t__Corynebacterium callunae DSM 20147 0 0 0 0 0 13 0 1602 1780 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 9;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 11;t__ 0 0 0 0 0 0 0 348 348 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage LHTSCC;t__Mycobacterium phage Obama12 0 0 0 0 0 0 0 1035 1035 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 24;t__ 0 0 0 0 0 0 0 111 111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Soto;t__Mycobacterium phage Swish 0 0 0 0 7 413 826 128 1374 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Vp5virus;s__Vibrio virus VC8;t__Vibrio phage phiVC8 0 0 0 0 3 4 0 781 788 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Kita;t__ 0 0 0 0 0 341 0 665 1006 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H7N9 subtype 0 0 0 0 0 0 0 251 251 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Klebsiella virus KpV289;t__Klebsiella phage vB_KpnP_KpV289 0 0 0 0 0 45 0 776 821 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Subterranean clover mottle virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Keshu;t__ 0 0 0 0 0 84 0 1141 1225 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vi1virus;s__Dickeya virus Limestone;t__ 0 0 0 0 2520 19 0 509 3048 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Plum pox virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Salem virus;t__ 0 0 0 0 0 0 0 333 333 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus D;t__Simian adenovirus 13 0 0 0 0 0 0 0 658 658 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage PPpW-3;t__ 0 0 0 0 0 0 0 871 871 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus DL68;t__Pseudomonas phage DL68 0 0 0 0 0 5 0 1317 1322 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhizobium phage 16-3;t__ 0 0 0 0 0 0 0 1203 1203 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou bivalvia virus 2;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phieco32virus;s__Escherichia virus ECB2;t__Escherichia phage ECBP2 0 0 0 0 0 53 0 1493 1546 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Mastadenovirus;s__Simian mastadenovirus WIV19;t__ 0 0 0 0 0 0 0 671 671 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Lily symptomless virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 18;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Cassava common mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus NGchicken15/NGA/2009;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__G4microvirus;s__Escherichia virus G4;t__Enterobacteria phage G4 clade 0 0 0 0 0 0 0 111 111 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 8 LDMD-2013;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 1;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Grapevine berry inner necrosis virus;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 6;t__ 0 0 0 0 0 0 0 324 324 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis alaskensis;t__Sphingopyxis alaskensis RB2256 0 0 0 0 0 0 0 568 570 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Ovechkin;t__ 0 0 0 0 0 0 0 1166 1166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Inventum;t__ 0 0 0 5 555 366 0 215 1141 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Wildcatvirus;s__Mycobacterium virus Wildcat;t__Mycobacterium phage Wildcat 0 0 0 0 0 0 0 1565 1565 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 13;t__ 0 0 0 0 0 0 0 168 168 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Curtobacterium;s__Curtobacterium sp. Leaf183;t__ 1 0 2 5 39 51 0 71238 71336 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Idaeovirus;s__Raspberry bushy dwarf virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Dill cryptic virus 1;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Nerine latent virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Equus caballus papillomavirus 8;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 16;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Psittaciform 1 bornavirus;t__Parrot bornavirus 4 0 0 0 0 0 0 0 178 178 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 11;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Bronvirus;s__Mycobacterium phage Rumpelstiltskin;t__ 0 0 0 0 0 648 0 737 1385 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 74;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Alphapartitivirus;s__Vicia cryptic virus;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 4;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Sripuvirus;s__Almpiwar sripuvirus;t__Oak-Vale virus 0 0 0 0 0 0 0 224 224 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Alphacoronavirus 1;t__Feline coronavirus 0 0 0 0 0 0 0 587 587 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Merkel cell polyomavirus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 2;t__Human papillomavirus type 48 0 0 0 0 0 0 0 141 141 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling tombus-like virus 4;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 13;t__Human papillomavirus type 128 0 0 0 0 0 0 0 145 145 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 7;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Orthopneumovirus;s__Bovine orthopneumovirus;t__ 0 0 0 0 0 0 0 302 302 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Euphoria;t__ 0 0 0 0 342 268 0 461 1071 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Tomato black ring virus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-13;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Bivalve RNA virus G1;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Nanovirus;s__Faba bean necrotic stunt virus;t__ 0 0 0 0 0 0 0 144 144 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia bronchialis;t__Gordonia bronchialis DSM 43247 0 0 0 0 0 0 0 1624 1628 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 3;t__ 0 0 0 0 0 0 0 358 358 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 11;t__ 0 0 0 0 0 0 0 231 231 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Livupivirus A;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 12;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 26;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sesarmid crab virus 1;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Anulavirus;s__Amazon lily mild mottle virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe sobemo-like virus 1;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Senna mosaic virus;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Betaendornavirus;s__Tuber aestivum betaendornavirus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Torovirus;s__Porcine torovirus;t__ 0 0 0 0 0 0 0 566 566 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Mahlapitsi virus;t__ 0 0 0 0 0 0 0 446 446 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Acheta domesticus volvovirus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Mastomys polyomavirus;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Gossypium darwinii symptomless alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sweet potato virus C;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper leaf curl Yunnan virus;t__Pepper leaf curl Yunnan virus-[YN323] 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Sigmapapillomavirus;s__Sigmapapillomavirus 1;t__Erethizon dorsatum papillomavirus 1 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Beilong virus;t__ 0 0 0 0 0 0 0 384 384 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cowpea polerovirus 2;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 8;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 17;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 10;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Hepandensovirus;s__Decapod hepandensovirus 1;t__Penaeus monodon hepandensovirus 4 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae Bog1183_53;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia atyid shrimp virus 4;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 63;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Sclerotinia sclerotiorum fusarivirus 1;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Porcine pestivirus isolate Bungowannah;t__ 0 0 0 0 0 0 0 253 253 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Alternanthera mosaic virus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Pseudomonas phage PaBG;t__ 0 0 0 0 0 0 0 5162 5162 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Persea americana alphaendornavirus 1;t__ 0 0 0 0 0 0 0 269 269 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Pneumoviridae;g__Pneumovirus;s__Canine pneumovirus;t__ 0 0 0 0 9 0 0 288 297 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 6;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Sin Nombre orthohantavirus;t__ 0 0 0 0 0 0 0 242 242 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Ralstonia phage RSS0;t__ 0 0 0 0 129 4 0 12 145 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Aquareovirus;s__Aquareovirus G;t__American grass carp reovirus 0 0 0 0 0 0 0 453 453 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 9;t__ 0 0 0 0 0 0 0 308 308 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium sp. 4-46;t__ 0 0 0 0 0 0 0 1497 1557 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Wheat yellow dwarf virus-GPV;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pecluvirus;s__Indian peanut clump virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 3;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Oleavirus;s__Olive latent virus 2;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 110;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 15;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia sobemo-like virus 1;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Cacao mild mosaic virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Cactus virus X;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Grapevine leafroll-associated virus 2;t__ 0 0 0 0 0 0 0 329 329 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage NelitzaMV;t__ 0 0 0 0 1215 81 0 159 1455 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3virus;s__Pseudomonas phage D3;t__ 0 0 0 0 0 0 0 1128 1128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Trouble;t__ 0 0 0 0 198 402 0 442 1042 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Nerujay;t__ 0 0 0 0 285 401 0 383 1069 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Turj99;t__ 0 0 0 0 226 334 0 463 1023 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Betanodavirus;s__Tiger puffer nervous necrosis virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 7;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Guangdong virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Guangdong virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Perina nuda virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella phage Spp001;t__ 0 0 0 0 0 0 0 1095 1095 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Beet chlorosis virus;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Goutanap virus;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__;s__Nse virus;t__ 0 0 0 0 0 0 0 401 401 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Basella rugose mosaic virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Plasmaviridae;o__;f__;g__Plasmavirus;s__Acholeplasma virus L2;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Erwinia phage vB_EamM-Y2;t__ 0 0 0 0 0 0 0 1132 1132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Kluyvera virus Kvp1;t__Kluyvera phage Kvp1 0 0 0 0 0 80 0 709 789 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Hordeivirus;s__Barley stripe mosaic virus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Gallivirus;s__Chicken gallivirus 1;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Ornithogalum mosaic virus;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Bacillus virus 1;t__ 0 0 0 0 0 0 0 701 701 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 2;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Pepino mosaic virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Johnsongrass mosaic virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 1;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Bymovirus;s__Barley yellow mosaic virus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 9;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai charybdis crab virus 1;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cyanophage NATL1A-7;t__ 0 0 0 0 0 0 0 954 954 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tobacco curly shoot betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Potato yellow vein virus;t__ 0 0 0 0 0 0 0 341 341 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Citrus exocortis viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum leaf curl betasatellite;t__Malvastrum leaf curl virus-associated defective DNA beta 0 0 0 0 0 1 0 16 17 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum yellow mosaic virus satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Porcine parvovirus 6;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 22;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-26;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyodeltapapillomavirus;s__Dyodeltapapillomavirus 1;t__Sus scrofa papillomavirus 1 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Anseriform dependoparvovirus 1;t__Duck parvovirus 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Canine papillomavirus 14;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 20;t__Human papillomavirus type 163 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__West Nile virus;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 37;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia sobemo-like virus 2;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus VA3;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Crohivirus;t__ 0 0 0 0 0 0 0 146 146 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium falsenii;t__Corynebacterium falsenii DSM 44353 0 0 0 0 0 0 0 840 840 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Plantibacter;s__Plantibacter sp. Leaf314;t__ 0 0 2 1 29 0 0 79195 79227 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 4;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Chrysanthemum virus B;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Lupine mosaic virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Honeysuckle yellow vein beta;t__Honeysuckle yellow vein beta-[Japan:Fukui:2001] 0 0 0 0 0 0 0 26 26 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 20;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__;s__Gompholobium virus A;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Aroa virus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Ribgrass mosaic virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Turnip vein-clearing virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Divavirus;s__Hardenbergia virus A;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 9;t__ 0 0 0 0 0 0 0 275 275 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Tospoviridae;g__Orthotospovirus;s__Watermelon silver mottle orthotospovirus;t__Watermelon silver mottle virus 0 0 0 0 0 0 0 343 343 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Enterococcus phage EFAP-1;t__ 0 0 0 0 0 0 0 422 422 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage Enoki;t__ 0 0 0 0 111 3 0 472 586 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic yellows C7 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum enation alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 72;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Orchid;t__ 0 0 0 0 0 0 0 1612 1612 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL082;t__Propionibacterium phage PHL082M00 0 0 0 0 156 30 0 403 589 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sweet potato virus G;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD69;t__ 0 0 0 0 369 187 0 182 738 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 21;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betacarmovirus;s__Japanese iris necrotic ring virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Edwardsiella phage GF-2;t__ 0 0 0 0 0 0 0 862 862 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 27;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Parthenium leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia virus phiE202;t__ 0 0 0 0 0 290 0 424 714 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Pagoda yellow mosaic associated virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__King virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Feline leukemia virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Solenopsis invicta virus 3;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Koala retrovirus;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 33;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Aquabirnavirus;s__Tasmanian aquabirnavirus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 14;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Seagreen;t__ 0 0 0 0 335 367 0 453 1155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Phormidium phage Pf-WMP3;t__ 0 0 0 0 0 0 0 864 864 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Proteus phage PM16;t__ 0 0 0 0 0 39 0 786 825 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__;s__Fusarium langsethiae hypovirus 1;t__ 0 0 0 0 3 0 0 253 256 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-8;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Horsegram yellow mosaic virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Osmaximus;t__Mycobacterium phage OSmaximus 0 0 0 0 26 1034 0 322 1382 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Human papillomavirus type 201;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Citrus endogenous pararetrovirus;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 77;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Pari;t__ 0 0 0 0 318 288 0 406 1012 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 2;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Parechovirus;s__Human parechovirus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Klebsiella phage JD001;t__ 0 0 0 0 0 0 0 976 976 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-6;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__;s__Enterobacteria phage M;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 41;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 10;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__;s__Porcine reproductive and respiratory syndrome virus;t__ 0 0 0 0 0 0 0 308 308 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Tench rhabdovirus S64;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Human pegivirus 2;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus C;t__ 0 0 0 0 0 0 0 168 168 k__ArchaeaPlasmid;p__Euryarchaeota;c__Halobacteria;o__Halobacteriales;f__;g__Halanaeroarchaeum;s__Halanaeroarchaeum sulfurireducens;t__ 0 0 0 0 0 0 0 2485 2485 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cotton leaf curl Burewala alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Mulberry badnavirus 1;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Sugarcane bacilliform Guadeloupe D virus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Oryzavirus;s__Rice ragged stunt virus;t__ 0 0 0 0 0 0 0 507 507 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas phage NH-4;t__ 0 0 0 0 0 0 0 1322 1322 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Miniopterus polyomavirus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei lepidoptera virus 3;t__ 0 0 0 0 0 0 0 472 472 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Sugarcane bacilliform IM virus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Cimodo virus;t__ 0 0 0 0 0 0 0 474 474 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak UI virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Bufavirus-3;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Commelina yellow mottle virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Waterbird 1 bornavirus;t__Aquatic bird bornavirus 2 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Potato virus V;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Orbivirus SX-2017a;t__ 0 0 0 0 0 11 0 357 368 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes verus polyomavirus 2;t__Pan troglodytes verus polyomavirus 2a 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified viruses;c__Duck faeces associated circular DNA virus 3;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Tomato chocolate spot virus;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 104;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Cyrtanthus elatus virus A;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 81;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Bovine retrovirus CH15;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Shayang spider virus 4;t__ 0 0 0 0 0 0 0 428 428 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cowpea severe leaf curl-associated DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Thelephora terrestris virus 1;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Snenia;t__ 0 0 0 0 0 0 0 1512 1512 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__;s__Phomopsis longicolla RNA virus 1;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai rhabdo-like virus 6;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Taro bacilliform CH virus;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Aquabirnavirus;s__Victorian trout aquabirnavirus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Arthrobacter phage BarretLemon;t__ 0 0 0 0 0 0 0 1025 1025 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei orthoptera virus 5;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Banzi virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Clerodendrum golden mosaic China virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Marine snail associated circular virus;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Raspberry latent virus;t__ 0 0 0 0 0 0 0 506 506 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bat polyomavirus 6c;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Filoviridae;g__Cuevavirus;s__Lloviu cuevavirus;t__ 0 0 0 0 0 0 0 378 378 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 3;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Thottapalayam orthohantavirus;t__ 0 0 0 0 0 0 0 231 231 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium sp. Leaf291;t__ 0 0 7 0 6 11 0 71400 71424 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Validus;t__ 0 0 0 0 0 0 0 1249 1249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Ariel;t__ 0 0 0 0 1768 53 0 374 2195 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Madariaga virus;t__ 0 0 0 0 0 0 0 232 232 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei astro-like virus;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Jasmine virus C;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 2;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Penaeus monodon circovirus VN11;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Vhmlvirus;s__Vibrio virus VP585;t__Vibrio phage VP585 0 0 0 0 0 368 0 484 852 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus L13;t__Salmonella phage L13 0 0 0 0 0 38 0 386 424 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus HyRo;t__Mycobacterium phage HyRo 0 0 0 12 64 2318 0 680 3074 k__Viruses;p__unclassified viruses;c__Imjin River virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Zika virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Archaeal BJ1 virus;t__ 0 0 0 0 0 0 0 845 845 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao sobemo-like virus 2;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Sauropus yellowing virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Acinetobacter phage IME_AB3;t__ 0 0 0 0 0 0 0 860 860 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Barley yellow dwarf virus-PAV;t__ 0 0 0 0 0 2 0 111 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 11;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 5;t__ 0 0 0 0 0 0 0 253 253 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 19;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 2;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unassigned viruses;c__Megabirnaviridae;o__;f__;g__Megabirnavirus;s__Rosellinia necatrix megabirnavirus 2-W8;t__ 0 0 0 0 0 0 0 337 337 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Alphatetraviridae;g__Omegatetravirus;s__Dendrolimus punctatus tetravirus;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Tapara virus;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__dsDNA viruses, no RNA stage;c__Iridoviridae;o__;f__;g__Megalocytivirus;s__Infectious spleen and kidney necrosis virus;t__ 0 0 0 0 0 0 0 2227 2227 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 73;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Siadenovirus;s__Turkey siadenovirus A;t__ 0 0 0 0 0 0 0 525 525 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Siadenovirus;s__Turkey siadenovirus A;t__Turkey adenovirus 3 0 0 0 0 0 0 525 0 525 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 42;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Magpie-robin coronavirus HKU18;t__ 0 0 0 0 0 0 0 533 533 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling sobemo-like virus 1;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Cheravirus;s__Arracacha virus B;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Mogiana tick virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Mytilus sp. clam associated circular virus;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Proteus phage PM 93;t__ 0 0 0 0 0 0 0 903 903 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Mammalian 1 bornavirus;t__Borna disease virus 2 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Phocine morbillivirus;t__ 0 0 0 0 0 0 0 313 313 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Narcissus yellow stripe virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Plectrovirus;s__Acholeplasma virus MV-L51;t__Acholeplasma phage MV-L1 0 0 0 0 0 0 0 89 89 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 7;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 21;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 40;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 4;t__ 0 0 0 0 0 0 0 257 257 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Escherichia virus K1-5;t__ 0 0 0 0 0 108 0 779 887 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Dianthovirus;s__Red clover necrotic mosaic virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Ntaya virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Alma;t__ 0 0 0 0 0 0 0 1063 1063 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Rottboellia yellow mottle virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Aureusvirus;s__Maize white line mosaic virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cardiovirus;s__Cardiovirus B;t__Theilovirus 0 0 0 0 0 0 0 159 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan arthropod virus 2;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Taro bacilliform virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Rdjlvirus;s__Roseobacter virus RDJL1;t__Roseobacter phage RDJL Phi 1 0 0 0 0 0 0 0 1253 1253 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Murine leukemia virus;t__Friend murine leukemia virus 0 0 0 0 0 2 3 161 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Omegavirus;s__Mycobacterium virus Thibault;t__Mycobacterium phage Thibault 0 0 0 0 541 123 0 1462 2126 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium gilvum;t__Mycobacterium gilvum Spyr1 0 0 0 0 0 373 0 3111 4709 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Lindernia anagallis yellow vein virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 30;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tomato mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-8;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Chy4;t__ 0 0 0 0 407 518 0 7 932 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Tetraparvovirus;s__Primate tetraparvovirus 1;t__Human parvovirus 4 G1 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Mamastrovirus 10;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Meles meles polyomavirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Tailam virus;t__ 0 0 0 0 0 0 0 383 383 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__;s__Carnation yellow fleck virus;t__ 0 0 0 0 0 0 0 312 312 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Oman virus;t__ 0 0 0 0 0 3 0 52 55 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Clostridioides;s__Clostridioides difficile;t__Clostridioides difficile 630 0 0 0 0 0 0 0 157 157 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pantoea virus Limelight;t__Pantoea phage LIMElight 0 0 0 0 0 0 0 890 890 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Polemovirus;s__Poinsettia latent virus;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Bluetongue virus;t__ 0 0 0 0 0 0 0 366 366 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei coleoptera virus 3;t__ 0 0 0 0 0 0 0 274 274 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Kappatorquevirus;s__Torque teno sus virus k2;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Wisteria vein mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Pestivirus Giraffe-1;t__Pestivirus giraffe-1 H138 0 0 0 0 0 0 0 252 252 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 18;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 15;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Astrovirus wild boar/WBAstV-1/2011/HUN;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 1;t__Human papillomavirus type 5 0 0 0 0 0 0 0 154 154 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 18;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Cypovirus;s__Cypovirus 2;t__Inachis io cypovirus 2 0 0 0 0 0 0 0 464 464 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak OL virus;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Macaca fascicularis polyomavirus 1;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei rhabdo-like virus 3;t__ 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage EagleEye;t__ 0 0 0 0 0 0 0 1059 1059 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus D;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Llama;t__ 0 0 0 0 148 134 0 887 1169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Blueberry scorch virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 40;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 121;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Oscivirus;s__Oscivirus A;t__Oscivirus A2 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 3;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Rhinovirus B;t__Human rhinovirus B14 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Rodent hepatovirus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Rotavirus;s__Rotavirus F;t__Rotavirus F chicken/03V0568/DEU/2003 0 0 0 0 0 0 0 346 346 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 53;t__ 0 0 0 0 0 0 0 198 198 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Pusillimonas;s__Pusillimonas sp. T7-7;t__ 0 0 0 0 0 0 0 824 824 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Uukuniemi phlebovirus;t__Uukuniemi virus 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Phomopsis longicolla hypovirus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__;s__Bat coronavirus BM48-31/BGR/2008;t__ 0 0 0 0 0 0 0 585 585 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Otomops polyomavirus 2;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Wenzhou Shrimp Virus 1;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage ShedlockHolmes;t__ 0 0 0 0 0 0 0 1221 1221 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Aphthovirus;s__Foot-and-mouth disease virus;t__Foot-and-mouth disease virus - type O 0 0 0 0 0 0 0 162 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 6;t__ 0 0 0 0 0 0 0 250 250 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 24;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Acinetobacter phage Presley;t__ 0 0 0 0 0 0 0 1555 1555 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__;s__Beihai hypo-like virus 1;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 78;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian paramyxovirus 13;t__Avian paramyxovirus goose/Shimane/67/2000 0 0 0 0 0 0 0 322 322 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage MichelleMyBell;t__ 0 0 0 0 29 171 0 644 844 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Tacheng Tick Virus 3;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hunnivirus;s__Hunnivirus A;t__Bovine hungarovirus 1 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Gairo mammarenavirus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Avastrovirus;s__Duck astrovirus GII.A;t__Duck astrovirus C-NGB 0 0 0 0 0 0 0 154 154 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 11;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 8;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Apoi virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Cherry mottle leaf virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus VN;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mollusks virus 1;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Mali virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Ceratocystis resinifera virus 1;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Australian bat lyssavirus;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Caulimovirus;s__Carnation etched ring virus;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus MLB2;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 14;t__Human papillomavirus type 90 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Marnaviridae;g__Marnavirus;s__Heterosigma akashiwo RNA virus;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Lanzarote virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Rslunavirus;s__Ralstonia virus RSL1;t__Ralstonia phage phiRSL1 0 0 0 0 0 0 0 4625 4625 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfovibrio;s__Desulfovibrio hydrothermalis;t__Desulfovibrio hydrothermalis AM13 = DSM 14728 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-8;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__;s__Pea yellow stunt virus;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Astrovirus MLB3;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Brassica yellows virus;t__ 0 0 0 0 0 1 0 112 113 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wuhan cricket virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 42;t__ 0 0 0 0 0 0 0 156 156 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Kocuria;s__Kocuria palustris;t__ 0 0 7 7 0 0 0 57074 57088 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__;s__Arachis pintoi virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Antheraea pernyi iflavirus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Whirlwind;t__ 0 0 0 0 0 120 0 1400 1520 k__Viruses;p__unclassified bacterial viruses;c__Ralstonia phage RS138;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 838 838 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas taxi;t__ 0 0 0 0 0 0 0 3990 4054 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Erysiphe cichoracearum alphaendornavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Artemia melana sponge associated circular genome;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodovulum phage vB_RhkS_P1;t__ 0 0 0 0 0 0 0 775 775 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xingshan nematode virus 6;t__ 0 0 0 0 0 0 0 130 130 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Phycicoccus;s__Phycicoccus sp. Soil748;t__ 0 0 18 16 25 27 0 79280 79366 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__;g__Thiomonas;s__Thiomonas arsenitoxydans;t__ 0 0 0 0 0 0 0 935 935 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__DeBrazzas monkey arterivirus;t__ 0 0 0 0 0 0 0 313 313 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Delftia phage RG-2014;t__ 0 0 0 0 0 0 0 1479 1479 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Canine picornavirus;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage D3112;t__ 0 0 0 0 41 0 0 711 752 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Bean yellow dwarf virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage MiaZeal;t__ 0 0 0 0 1432 205 0 578 2215 k__Viruses;p__unclassified viruses;c__Lonestar tick chuvirus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Tasp14;t__ 0 0 0 0 202 244 0 582 1028 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Skipole;t__Mycobacterium phage SkiPole 0 0 0 0 161 0 0 901 1062 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei lepidoptera virus 1;t__ 0 0 0 0 0 0 0 273 273 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Hedgehog hepatovirus;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Wild potato mosaic virus;t__ 0 0 0 0 0 0 0 197 197 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium variabile;t__ 0 0 24 0 0 0 0 94094 94118 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Mercadeo virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae GNX3R;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Salivirus;s__Salivirus A;t__Salivirus NG-J1 0 0 0 0 0 0 0 159 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 12;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Enterobacteria phage fd;t__ 0 0 0 0 23 0 0 105 128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Roseobacter phage SIO1;t__ 0 0 0 0 0 0 0 796 796 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Nyamiviridae;g__Nyavirus;s__Nyamanini nyavirus;t__ 0 0 0 0 0 0 0 232 232 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD30;t__ 0 0 0 0 393 169 0 176 738 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage associated gemycircularvirus 3;t__ 0 3 0 0 0 0 0 39 42 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Sewage derived gemykibivirus 1;t__Sewage-associated gemycircularvirus 3 0 0 0 0 0 0 0 42 42 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Porcine type-C oncovirus;t__Porcine endogenous retrovirus 0 0 0 0 0 0 0 161 161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PegLeg;t__ 0 0 0 0 0 0 0 1619 1619 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Zemlya;t__ 0 0 0 0 0 101 0 920 1021 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Drago;t__ 0 0 0 0 61 749 0 278 1088 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Catera 0 0 0 1 133 0 0 2941 3075 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas massiliensis;t__Cellulomonas massiliensis JC225 0 0 7 17 0 57 0 64359 64440 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 11;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Saccharomyces 23S RNA narnavirus;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Charlievirus;s__Mycobacterium virus Redi;t__Mycobacterium phage Redi 0 0 0 0 50 7 0 794 851 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Potato virus S;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hepe-like virus 9;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Paracoccus phage vB_PmaS_IMEP1;t__ 0 0 0 0 0 0 0 774 841 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Soybean dwarf virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Phipapillomavirus;s__Phipapillomavirus 1;t__Capra hircus papillomavirus 1 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Mammalian orthoreovirus;t__Mammalian orthoreovirus 3 0 0 0 0 0 0 0 446 446 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz24virus;s__Pseudomonas phage LUZ24;t__ 0 0 0 0 4 0 0 908 912 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kadam virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Physalis mottle virus;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Opuntia virus X;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Salmonella phage BP12B;t__ 0 0 0 0 0 263 0 609 872 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Knoellia;s__Knoellia flava;t__Knoellia flava TL1 0 0 20 24 29 76 0 70912 71061 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Getah virus;t__ 0 0 0 0 0 0 0 231 231 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Equus ferus caballus papillomavirus type 4;t__ 0 0 0 0 0 0 0 151 151 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp. Soil774;t__ 1 0 13 0 10 45 0 76827 76896 k__Viruses;p__dsDNA viruses, no RNA stage;c__Guttaviridae;o__;f__;g__Betaguttavirus;s__Aeropyrum pernix ovoid virus 1;t__ 0 0 0 0 0 0 0 275 275 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pepper veinal mottle virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Salmonella phage 21;t__ 0 0 0 0 1 0 0 1036 1037 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Salmonella virus SP6;t__ 0 0 0 0 0 0 0 875 875 k__Viruses;p__unclassified bacterial viruses;c__Brucella phage BiPBO1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 937 937 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Xeno;t__ 0 0 0 0 393 56 0 398 847 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Perseus;t__ 0 0 0 0 662 206 0 194 1062 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces davawensis;t__Streptomyces davawensis JCM 4913 0 0 0 0 0 0 0 1774 1786 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Rosellinia necatrix virus 1;t__Rosellinia necatrix partitivirus 1-W8 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus ATCC29399BT;t__Propionibacterium phage ATCC29399B_T 0 0 0 0 1 333 0 256 590 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces avermitilis;t__Streptomyces avermitilis MA-4680 = NBRC 14893 0 0 0 0 0 0 0 1836 1881 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Drosophila immigrans Nora virus;t__ 0 0 0 0 0 0 0 245 245 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Geodermatophilales;f__Geodermatophilaceae;g__Modestobacter;s__Modestobacter marinus;t__ 0 0 34 0 0 0 0 111476 111510 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL132N00;t__Propionibacterium phage PHL132N00 0 0 0 0 24 146 0 410 580 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Chaetoceros sp. DNA virus 7;t__ 0 0 0 0 0 0 0 111 111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Acadianvirus;s__Mycobacterium virus Acadian;t__Mycobacterium phage Acadian 0 0 0 0 12 0 0 1385 1397 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Sinorhizobium phage phiM9;t__ 0 0 0 0 0 0 0 2984 2984 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus phiAB1;t__Acinetobacter phage phiAB1 0 0 0 0 0 128 0 702 830 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Rhizoctonia solani dsRNA virus 2;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Saccharomyces kudriavzevii virus L-A1;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__Genomoviridae;c__Gemygorvirus;o__;f__;g__;s__Starling associated gemygorvirus 1;t__Faeces associated gemycircularvirus 10 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Smeadley;t__ 0 0 0 0 69 0 0 978 1047 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Saguaro cactus virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Zhejiang mosquito virus 1;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ledantevirus;s__Yongjia ledantevirus;t__Yongjia Tick Virus 2 0 0 0 0 0 0 0 216 216 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 31;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 2;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Kilifi Virus;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus LMA2;t__Pseudomonas phage LMA2 0 0 0 0 0 727 0 603 1330 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage MD8;t__ 0 0 0 0 0 104 0 761 865 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 6;t__ 0 0 0 0 0 0 0 188 188 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Oerskovia;s__Oerskovia turbata;t__ 2 0 25 18 23 0 0 80370 80438 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phicbkvirus;s__Caulobacter virus phiCbK;t__ 0 0 0 0 0 895 0 3419 4314 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Pg1;t__Mycobacterium phage Badfish 0 0 0 0 2 1105 156 117 1380 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 19;t__Human papillomavirus type 166 0 0 0 0 0 0 0 144 144 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sea slater virus 2;t__ 0 0 0 0 0 0 0 255 255 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Lucheng Rn rat coronavirus;t__ 0 0 0 0 0 0 0 575 575 k__Viruses;p__unclassified viruses;c__Bat badicivirus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xingshan nematode virus 2;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 19;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou hepe-like virus 2;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Norway rat hepacivirus 1;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 5;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__unclassified viruses;c__Phytophthora parasitica virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage tf;t__ 0 0 0 0 0 0 0 925 925 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bat polyomavirus 6d;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Bat picornavirus 1;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Equine papillomavirus type 6;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Tobacco virus 1;t__ 0 0 0 0 0 0 0 307 307 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Seoul orthohantavirus;t__ 0 0 0 0 0 0 0 235 235 k__Viruses;p__unclassified bacterial viruses;c__Pseudomonas phage phiPto-bp6g;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 529 529 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Grapevine rupestris stem pitting-associated virus;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl China betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Mimoreovirus;s__Micromonas pusilla reovirus;t__ 0 0 0 0 0 0 0 493 493 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Strawberry polerovirus 1;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Yerba mate alphaendornavirus;t__ 0 0 0 0 0 0 0 279 279 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Langat virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Begomovirus-associated DNA-II;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Elm mottle virus;t__ 0 0 0 0 0 1 0 167 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Deltapolyomavirus;s__Human polyomavirus 6;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 81;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 62;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Mariental mammarenavirus;t__ 0 0 0 0 0 0 0 202 202 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas iranensis;t__Cellulomonas iranensis NBRC 101100 = JCM 18110 0 0 3 2 0 0 0 78950 78955 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__;s__Strawberry latent ringspot virus;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__Simian hemorrhagic fever virus;t__ 0 0 0 0 0 0 0 314 314 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Daphne mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kedougou virus;t__ 0 0 0 0 0 0 0 214 214 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Soupsvirus;s__Gordonia virus Soups;t__Gordonia phage Soups 0 0 0 0 484 0 0 574 1058 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 18;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HRTV-8;t__ 0 0 0 0 0 0 0 1490 1490 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Tomato blistering mosaic virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Nocardia phage NBR1;t__ 0 0 0 0 0 0 0 922 922 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Barley yellow striate mosaic cytorhabdovirus;t__Barley yellow striate mosaic virus 0 0 0 0 0 0 0 254 254 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Cotabato virus;t__ 0 0 0 0 0 2 0 52 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Allamanda leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Rajasthan virus;t__ 0 0 0 0 0 18 0 37 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 50;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Lisianthus enation leaf curl virus;t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Delftia phage IME-DE1;t__ 0 0 0 0 0 0 0 761 761 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Cacipacore virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Jeju orthohantavirus;t__Jeju virus 0 0 0 0 0 0 0 234 234 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Salmon pancreas disease virus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 4;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Eclipta yellow vein virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Pepper vein yellows virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Iracema64;t__ 0 0 0 0 277 258 0 497 1032 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Porartevirus;s__Lactate dehydrogenase-elevating virus;t__ 0 0 0 0 0 0 0 282 282 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Shayang fly virus 4;t__ 0 0 0 0 0 0 0 321 321 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Benyviridae;g__Benyvirus;s__Beet soil-borne mosaic virus;t__ 0 0 0 0 0 0 0 279 279 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow margin leaf curl virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus KP34;t__Klebsiella phage KP34 0 0 0 0 0 0 0 876 876 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Alternaria arborescens mitovirus 1;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis GB virus B;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Pegivirus C;t__GB virus C 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Rhizoctonia oryzae-sativae mitovirus 1;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Bell pepper alphaendornavirus;t__ 0 0 0 0 0 0 0 294 294 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__;s__Wuhan insect virus 14;t__ 0 0 0 0 0 0 0 249 249 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Pbunavirus;s__Pseudomonas virus Ab28;t__Pseudomonas phage vB_PaeM_C1-14_Ab28 0 0 0 0 0 310 0 1013 1323 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Wigglesworthia;s__Wigglesworthia glossinidia;t__Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Burkholderia phage JG068;t__ 0 0 0 0 0 0 0 832 832 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-7;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium yellow mosaic Florida virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Pseudomonas phage MP42;t__ 0 0 0 0 168 0 0 568 736 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Human polyomavirus 9;t__ 0 0 0 0 0 0 0 100 100 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Kineosporiales;f__Kineosporiaceae;g__Angustibacter;s__Angustibacter sp. Root456;t__ 0 0 32 0 0 0 0 76607 76639 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Sea otter polyomavirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage UmaThurman;t__ 0 0 0 0 0 163 0 839 1002 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage CaptainKirk2;t__ 0 0 0 0 0 535 0 422 957 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Utz;t__ 0 0 0 0 0 301 0 694 995 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 36;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Dinovernavirus;s__Fako virus;t__ 0 0 0 0 0 0 0 448 448 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus MrAK;t__Propionibacterium phage MrAK 0 0 0 0 45 148 0 401 594 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium virus 244;t__ 0 0 0 0 0 0 0 1489 1489 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Avian leukosis virus;t__Avian leukosis virus - RSA 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage PE3-1;t__ 0 0 0 0 42 11 0 728 781 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 10;t__ 0 0 0 0 0 0 0 198 198 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum leaf curl virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jwxvirus;s__Achromobacter virus JWX;t__Achromobacter phage JWX 0 0 0 0 0 0 0 994 994 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Pichinde mammarenavirus;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sapelovirus;s__Sapelovirus A;t__Porcine sapelovirus 1 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Antarctic picorna-like virus 2;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 62;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Bovine associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 22 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Chilli veinal mottle virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Mayaro virus;t__ 0 0 0 0 0 0 0 228 228 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 68;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-37;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__African horse sickness virus;t__ 0 0 0 0 0 0 0 372 372 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kunsagivirus;s__Bakunsa virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Patna virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Bhendi yellow vein betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Okra enation leaf curl betasatellite;t__Okra enation leaf curl betasatellite [India:Sonipat:EL10:2006] 0 0 0 0 0 10 0 17 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Mupapillomavirus;s__Mupapillomavirus 2;t__Human papillomavirus type 63 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Fragaria chiloensis latent virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 9;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Sadwavirus;s__Satsuma dwarf virus;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Amphibola crenata associated bacilladnavirus 1;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe narna-like virus 1;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Chlamydiamicrovirus;s__Chlamydia virus Chp2;t__Chlamydia phage 2 0 0 0 0 0 5 0 86 91 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Mouse mammary tumor virus;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phantastic;t__ 0 0 0 0 0 102 0 900 1002 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage PAJU2;t__ 0 0 0 0 3 0 0 934 937 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Vibrio phage VpKK5;t__ 0 0 0 0 0 0 0 1132 1132 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Botryosphaeria dothidea chrysovirus 1;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 49;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Tetrasphaera phage TJE1;t__ 0 0 0 0 0 0 0 984 984 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__O'nyong-nyong virus;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__Alphasphaerolipovirus;s__Haloarcula hispanica virus SH1;t__ 0 0 0 0 0 0 0 617 617 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Myxococcus phage Mx8;t__ 0 0 0 0 0 0 0 990 990 k__BacteriaPlasmid;p__Bacteroidetes;c__Flavobacteriia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium branchiophilum;t__Flavobacterium branchiophilum FL-15 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Chicken picornavirus 5;t__ 0 0 0 0 0 1 0 190 191 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Mobala mammarenavirus;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 4;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Zucchini yellow mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Tetraparvovirus;s__Chiropteran tetraparvovirus 1;t__Eidolon helvum (bat) parvovirus 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Tobacco etch virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus SWU1;t__Mycobacterium phage SWU1 0 0 0 0 7 539 0 503 1049 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Bebaru virus;t__ 0 0 0 0 0 0 0 237 237 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Starling circovirus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Brugmansia suaveolens mottle virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 11;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Lepidopteran ambidensovirus 1;t__Junonia coenia densovirus 0 0 0 0 0 0 0 118 118 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 5;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Deltacoronavirus;s__Sparrow coronavirus HKU17;t__ 0 0 0 0 0 0 0 521 521 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cronartium ribicola mitovirus 3;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage ShiVal 0 0 0 0 8 1030 226 103 1367 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Lagos bat lyssavirus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__Gammasphaerolipovirus;s__Thermus thermophilus bacteriophage P23-77;t__ 0 0 0 0 0 0 0 340 340 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Phlox Virus B;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling tombus-like virus 3;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage P483;t__ 0 0 0 0 0 0 0 816 816 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Drosophila C virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 80;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Cryphonectria hypovirus 3;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 24;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Rymovirus;s__Hordeum mosaic virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Phytoreovirus;s__Rice dwarf virus;t__ 0 0 0 0 0 0 0 474 474 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Lambdapapillomavirus 2;t__ 0 0 0 0 0 0 0 172 172 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__;f__;g__Polymorphum;s__Polymorphum gilvum;t__Polymorphum gilvum SL003B-26A1 0 0 11 0 0 0 0 1286 1391 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Demosthenesvirus;s__Gordonia virus Demosthenes;t__Gordonia phage Demosthenes 0 0 0 0 0 82 0 1399 1481 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Jutiapa virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Hepeviridae;g__;s__Bat hepevirus;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Colombian datura virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Ralstonia phage RSS1;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 30;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium yellow mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang narna-like virus 3;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Asian prunus virus 2;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Beet yellows virus;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Gremmeniella abietina mitochondrial RNA virus S2;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 6;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage ECBP5;t__ 0 0 0 0 0 0 0 908 908 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Poacevirus;s__Caladenia virus A;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Nigeria virus;t__Tomato leaf curl Nigeria virus-[Nigeria:2006] 0 0 0 0 0 1 0 54 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Klebsiella virus KP32;t__Klebsiella phage KP32 0 0 0 0 0 0 0 822 822 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Waikavirus;s__Maize chlorotic dwarf virus;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Pelarspovirus;s__Pelargonium chlorotic ring pattern virus;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus SU552A;t__Klebsiella phage vB_KpnP_SU552A 0 0 0 0 0 52 0 819 871 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus H;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Merremia mosaic virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Taupapillomavirus;s__Taupapillomavirus 1;t__Canis familiaris papillomavirus 2 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Duvenhage lyssavirus;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Triatovirus;s__Himetobi P virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia phage KL3;t__ 0 0 0 0 0 0 0 811 811 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Brambyvirus;s__Blackberry virus Y;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Atadenovirus;s__Psittacine atadenovirus A;t__Psittacine adenovirus 3 0 0 0 0 0 0 0 634 634 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 10;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Xylella phage Paz;t__ 0 0 0 0 0 0 0 877 877 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Bipper;t__ 0 0 0 0 0 0 0 1556 1556 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Gammapleolipovirus;s__Haloarcula virus His2;t__His2 virus 0 0 0 0 0 0 0 321 321 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__T1virus;s__Escherichia phage Jk06;t__ 0 0 0 0 0 0 0 921 921 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Chickpea chlorotic stunt virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 10;t__ 0 0 0 0 0 0 0 288 288 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__;s__Bovine nidovirus 1;t__Bovine nidovirus TCH5 0 0 0 0 0 0 0 405 405 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus AB3;t__Acinetobacter phage AB3 0 0 0 0 0 0 0 623 623 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 8;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Persimmon latent virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Raphanus sativus cryptic virus 1;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome BBC-A;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Jingmen picorna-like virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Stinger;t__Mycobacterium phage Stinger 0 0 0 0 0 39 0 1353 1392 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Tuhoko rubulavirus 2;t__Tuhoko virus 2 0 0 0 0 0 0 0 308 308 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Hippeastrum latent virus;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Shewanella sp. phage 3/49;t__ 0 0 0 0 0 0 0 803 803 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Norway rat hepacivirus 2;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__Nariva virus;t__ 0 0 0 0 0 0 0 305 305 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Laodelphax striatella honeydew virus 1;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Nyceirae;t__ 0 0 0 0 0 0 0 837 837 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Roniviridae;g__Okavirus;s__Gill-associated virus;t__ 0 0 0 0 0 0 0 525 525 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Pleospora typhicola fusarivirus 1;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Fusarium graminearum hypovirus 2;t__ 0 0 0 0 0 0 0 255 255 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Luz7virus;s__Pseudomonas virus LUZ7;t__Pseudomonas phage LUZ7 0 0 0 0 0 14 0 1484 1498 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 50;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuchang Cockroach Virus 1;t__ 0 0 0 0 0 0 0 214 214 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 3;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-44;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Gammaflexiviridae;g__Mycoflexivirus;s__Botrytis virus F;t__ 0 0 0 0 0 0 0 136 136 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Lit1virus;s__Pseudomonas virus Ab09;t__Pseudomonas phage PEV2 0 0 0 0 0 174 916 363 1453 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 3;t__ 0 0 0 0 0 0 0 372 372 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 39;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 8;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Citrus tristeza virus;t__ 0 0 0 0 0 0 0 385 385 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Alphanodavirus;s__Boolarra virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cyanophage PP;t__ 0 0 0 0 0 127 0 722 849 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Pear blister canker viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 106;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Qinghai Himalayan marmot astrovirus 2;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 39;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 10;t__ 0 0 0 0 0 14 0 168 182 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Henipavirus;s__Ghanaian bat henipavirus;t__Bat Paramyxovirus Eid_hel/GH-M74a/GHA/2009 0 0 0 0 0 0 0 370 370 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Rabbit vesivirus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Ndumu virus;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 43;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 15;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Salicola phage CGphi29;t__ 0 0 0 0 0 0 0 813 813 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Furovirus;s__Soil-borne wheat mosaic virus;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Barbel circovirus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-16;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Wuhan Insect virus 4;t__ 0 0 0 0 0 0 0 269 269 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PA6;t__Propionibacterium phage PA6 0 0 0 0 0 0 0 594 594 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Chimpanzee faeces associated microphage 3;t__ 0 0 0 0 0 3 0 97 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Habenaria mosaic virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Sacbrood virus;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Cactus mild mottle virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Respirovirus;s__Porcine respirovirus 1;t__ 0 0 0 0 0 0 0 307 307 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 15;t__Human papillomavirus type 135 0 0 0 0 0 0 0 145 145 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Erwiniaceae;g__Buchnera;s__Buchnera aphidicola;t__Buchnera aphidicola (Baizongia pistaciae) 0 0 0 0 0 0 0 47 47 k__Viruses;p__unassigned viruses;c__Bidnaviridae;o__;f__;g__Bidensovirus;s__Bombyx mori bidensovirus;t__Bombyx mori densovirus 3 0 0 0 0 0 0 0 248 248 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Potato yellow dwarf nucleorhabdovirus;t__ 0 0 0 0 0 0 0 257 257 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Highlands J virus;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage vB_PaeS_PM105;t__ 0 0 0 0 3 46 0 742 791 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Hydrangea chlorotic mottle virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Tianjin totivirus;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pepper severe mosaic virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Apricot latent virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Dioscorea bacilliform virus;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Thielaviopsis basicola mitovirus;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Tobacco vein mottling virus;t__ 0 0 0 0 0 0 0 189 189 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Rathayibacter;s__Rathayibacter sp. Leaf296;t__ 0 0 4 1 35 19 0 80044 80103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__Kafue Kinda chacma baboon virus;t__ 0 0 0 0 0 0 0 298 298 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 43;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Streptocarpus flower break virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 34;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Apple green crinkle associated virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Soybean latent spherical virus;t__ 0 0 0 0 0 0 0 277 277 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Penicillium aurantiogriseum fusarivirus 1;t__ 0 0 0 0 0 0 0 122 122 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL111M01;t__Propionibacterium phage PHL111M01 0 0 0 0 0 76 0 506 582 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Lesavirus 1;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Eidolon helvum papillomavirus 3;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 8;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Dinocampus coccinellae paralysis virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__unclassified viruses;c__Bat dicibavirus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Stormborn;t__Propionibacterium phage Stormborn 0 0 0 0 20 93 0 473 586 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 12;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Helicobasidium mompa alphaendornavirus 1;t__ 0 0 0 0 0 0 0 332 332 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 18;t__Human papillomavirus type 156 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Shayang Fly Virus 1;t__ 0 0 0 0 0 0 0 274 274 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Ferlavirus;s__Reptilian ferlavirus;t__ 0 0 0 0 0 0 0 307 307 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Chilli leaf curl India alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Coccinia mottle virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 2;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pokeweed mosaic virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Lily mottle virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Wild tomato mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Potato virus A;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Ipomovirus;s__Squash vein yellowing virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Canna yellow streak virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Mesoniviridae;g__Alphamesonivirus;s__Alphamesonivirus 4;t__Casuarina virus 0 0 0 0 0 0 0 398 398 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 6;t__Human papillomavirus type 103 0 0 0 0 0 0 0 145 145 k__BacteriaPlasmid;p__Firmicutes;c__Bacilli;o__Bacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp. IHBB 10380;t__ 0 0 0 0 0 0 0 83 341 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyomupapillomavirus;s__Dyomupapillomavirus 1;t__Morelia spilota papillomavirus 1 0 0 0 0 0 0 0 140 140 k__Viruses;p__unclassified viruses;c__Diabrotica virgifera virgifera virus 3;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 264 264 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Lineavirus;s__Escherichia virus I22;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Grapevine endophyte alphaendornavirus;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Bymovirus;s__Oat mosaic virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Carollia perspicillata polyomavirus 1;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Soymovirus;s__Blueberry red ringspot virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 90;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudoalteromonas phage H105/1;t__ 0 0 0 0 0 0 0 613 613 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 9;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Eragrovirus;s__Eragrostis curvula streak virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Hantavirus Z10;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Aparavirus;s__Acute bee paralysis virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 4;t__Human papillomavirus type 60 0 0 0 0 0 0 0 146 146 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 6;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 11;t__Human papillomavirus type 126 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Human circovirus VS6600022;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mottle Alagoas virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Bat hepatovirus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Bat picornavirus 3;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic yellows C9 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Mamastrovirus 1;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Verbena virus Y;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Enterobacteria phage phiEcoM-GJ1;t__ 0 0 0 0 0 0 0 1059 1059 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Leishmaniavirus;s__Leishmania RNA virus 2;t__Leishmania RNA virus 2 - 1 0 0 0 0 0 0 0 104 104 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Sida leaf curl virus-associated DNA beta;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kf1virus;s__Edwardsiella virus KF1;t__Edwardsiella phage KF-1 0 0 0 0 0 0 0 830 830 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Gengar;t__ 0 0 0 0 0 4 0 1228 1232 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Jingmen tombus-like virus 1;t__ 0 0 0 0 0 0 0 158 158 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Clavibacter;s__Clavibacter michiganensis;t__Clavibacter michiganensis subsp. sepedonicus 0 0 0 0 0 0 0 2823 2901 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium poae mitovirus 3;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Dianthovirus;s__Carnation ringspot virus;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Sclerotinia sclerotiorum umbra-like virus 1;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Mycobacterium phage Tonenili;t__ 0 0 0 0 0 0 0 3219 3219 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia virus phiE122;t__ 0 0 0 1 0 300 0 432 733 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Vortex;t__ 0 0 0 0 1130 0 0 236 1366 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Sclerotinia sclerotiorum hypovirus 1;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 11;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Dobrava-Belgrade orthohantavirus;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Laodelphax striatellus picorna-like virus 2;t__ 0 0 0 0 0 5 0 212 217 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling hepe-like virus 4;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Lambdapapillomavirus 4;t__Procyon lotor papillomavirus 1 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Salmon pancreas disease virus;t__Sleeping disease virus 0 0 0 0 0 0 0 237 237 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 7;t__Sewage-associated gemycircularvirus-7a 0 0 0 0 0 0 0 45 45 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia atyid shrimp virus 2;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Chaetoceros tenuissimus DNA virus;t__ 0 0 0 0 0 0 0 112 112 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Grapevine virus B;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__African green monkey polyomavirus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified viruses;c__Marine RNA virus PAL438;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Hantaan orthohantavirus;t__ 0 0 0 0 0 0 0 233 233 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Aparavirus;s__Solenopsis invicta virus-1;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Aspergillus foetidus dsRNA mycovirus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Betaendornavirus;s__Alternaria brassicicola betaendornavirus 1;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Potato aucuba mosaic virus;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Endive necrotic mosaic virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Siegesbeckia yellow vein virus-associated DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Aquaparamyxovirus;s__Salmon aquaparamyxovirus;t__ 0 0 0 0 0 0 0 339 339 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__Orthobunyavirus;s__Akabane orthobunyavirus;t__Akabane virus 0 0 0 0 0 0 0 237 237 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rickettsiales;f__Rickettsiaceae;g__Rickettsia;s__Rickettsia massiliae;t__Rickettsia massiliae str. AZT80 0 0 0 0 0 0 0 293 299 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 5;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Mupapillomavirus;s__Mupapillomavirus 1;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Spain virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified viruses;c__Rhizoctonia solani RNA virus HN008;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacter phage E-3;t__ 0 0 0 0 0 0 0 630 630 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Phocoena phocoena papillomavirus 1;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__unclassified viruses;c__Bat badicivirus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 17;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 16;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Senecio yellow mosaic virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper yellow leaf curl Indonesia virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 9;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Chimpanzee faeces associated circular DNA virus 1;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Salmonella phage 37;t__ 0 0 0 0 182 0 0 1022 1204 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Vibrio phage VCY-phi;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 40;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 16;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Mirabilis leaf curl India virus associated betasatellite;t__ 0 0 0 0 0 0 0 28 28 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Lineavirus;s__Salmonella virus IKe;t__Enterobacteria phage Ike 0 0 0 0 0 0 0 137 137 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Babuvirus;s__Abaca bunchy top virus;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 43;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling hepe-like virus 3;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sipunculid worm virus 2;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DHCV-2;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Arusha virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Saudi virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Harkavirus;s__Harkavirus A;t__Falcovirus A1 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chickpea redleaf virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__;g__Arlivirus;s__Lishi arlivirus;t__Lishi Spider Virus 2 0 0 0 0 0 0 0 198 198 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 3;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Ippy mammarenavirus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 6;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 7;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus spindle-shaped virus 1;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 41;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus bat/USA/2009;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak CA virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Drosophila A virus;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mottle leaf curl virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sapelovirus;s__Sapelovirus B;t__Simian sapelovirus 1 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Lettuce chlorosis virus;t__ 0 0 0 0 0 0 0 341 341 k__Viruses;p__unclassified viruses;c__Duck faeces associated circular DNA virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Sulawesi virus;t__ 0 0 0 0 0 0 0 55 55 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas gilvus;t__Cellulomonas gilvus ATCC 13127 0 0 7 83 41 56 0 70341 70528 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Ralstonia phage RSK1;t__ 0 0 0 0 0 0 0 809 809 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan heteroptera virus 2;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 10;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage WIVsmall;t__ 0 0 0 0 1 0 0 1066 1067 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 15;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Bagaza virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Mandarivirus;s__Citrus yellow vein clearing virus;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Ground squirrel hepatitis virus;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Vervet monkey polyomavirus 2;t__ 0 0 0 0 0 1 0 102 103 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Fujinami sarcoma virus;t__ 0 0 0 0 0 1 0 94 95 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Henipavirus;s__Hendra henipavirus;t__ 0 0 0 0 0 0 0 364 364 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Kanchanaburi virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Escherichia phage vB_EcoP_GA2A;t__ 0 0 0 0 11 13 0 785 809 k__Viruses;p__unclassified viruses;c__Diabrotica virgifera virgifera virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Bantam;t__ 0 0 0 0 0 0 0 1851 1851 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 5;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Avihepadnavirus;s__Heron hepatitis B virus;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 8;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Cebus albifrons polyomavirus 1;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__;s__Black raspberry necrosis virus;t__ 0 0 0 0 0 0 0 277 277 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Black medic leafroll alphasatellite 1;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou channeled applesnail virus 3;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Varroa destructor virus-1;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Blueberry necrotic ring blotch virus;t__ 0 0 0 0 0 0 0 277 277 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__Cherry green ring mottle virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Hardenbergia mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Ledantevirus;s__Fikirini ledantevirus;t__Fikirini rhabdovirus 0 0 0 0 0 0 0 222 222 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Fruitloop;t__ 0 0 0 1 436 141 0 591 1169 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei unio douglasiae virus 1;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Pedilanthus leaf curl virus alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HF1;t__ 0 0 0 0 0 0 0 1517 1517 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Stenotrophomonas phage IME15;t__ 0 0 0 0 0 0 0 770 770 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Escherichia virus T7;t__Enterobacteria phage T7 0 0 0 0 0 0 0 798 798 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai paphia shell virus 4;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcep78virus;s__Burkholderia virus Bcep781;t__ 0 0 0 0 0 94 0 870 964 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan arthropod virus 4;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 43;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bastrovirus/VietNam/Rat/16715_10;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 27;t__ 0 0 0 0 0 1 0 160 161 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-29;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage LinStu 0 0 0 2 95 266 2214 500 3077 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Chiltepin yellow mosaic virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__unclassified RNA viruses;c__Bivalve RNA virus G4;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bcep22virus;s__Burkholderia virus DC1;t__ 0 0 0 0 0 21 0 1215 1236 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Xingshan cricket virus;t__ 0 0 0 0 0 0 0 435 435 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Saetivirus;s__Vibrio virus fs2;t__Vibrio phage fs2 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus ZM36a;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 3;t__ 0 0 0 0 0 0 0 95 95 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__Methylobacterium;s__Methylobacterium populi;t__Methylobacterium populi BJ001 0 0 0 0 0 0 0 592 969 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Murphy;t__ 0 0 0 0 1256 0 0 267 1523 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ludwigia yellow vein virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Henan virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__TYLCAxV-Sic1-[IT:Sic2/2:04];t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Brugmansia mild mottle virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Reticuloendotheliosis virus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Nala;t__ 0 0 0 0 1222 144 0 151 1517 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 4;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium graminearum dsRNA mycovirus-1;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__St Croix River virus;t__ 0 0 0 0 0 0 0 351 351 k__Viruses;p__unclassified viruses;c__Rhizoctonia fumigata mycovirus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 23;t__ 0 0 0 0 0 0 0 292 292 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Botrytis cinerea mitovirus 2;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Enkosi;t__ 0 0 0 0 0 0 0 1181 1181 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 48;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mosaic leaf curl virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Bougainvillea chlorotic vein banding virus;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Gammatorquevirus;s__Torque teno midi virus 1;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Colobus monkey papillomavirus;t__Colobus guereza papillomavirus type 2 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Jerseyvirus;s__Salmonella virus SETP7;t__Salmonella phage SETP7 0 0 0 0 34 96 0 724 854 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Bovine faeces associated smacovirus 4;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-25;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Actinoplanes phage phiAsp2;t__ 0 0 0 0 0 0 0 1172 1172 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Wuhan Insect virus 5;t__ 0 0 0 0 0 0 0 254 254 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 3 0 0 0 0 0 0 0 94 94 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Parus major densovirus;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Escherichia virus BZ13;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Hawkeye;t__ 0 0 0 0 0 0 0 1347 1347 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou gastropodes virus 2;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai paphia shell virus 1;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__New Jersey polyomavirus-2013;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Salmonella phage phiSG-JL2;t__ 0 0 0 0 0 153 0 623 776 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Vincenzo;t__Mycobacterium phage Vincenzo 0 0 0 0 0 6 0 1436 1442 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Bovine faeces associated smacovirus 3;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-27;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Oryza rufipogon alphaendornavirus;t__ 0 0 0 0 0 0 0 278 278 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Beet western yellows virus;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 11;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Panax virus Y;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Betaretrovirus;s__Desmodus rotundus endogenous retrovirus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 74;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 4;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Fiddler Crab associated circular virus;t__ 0 0 0 0 0 0 0 32 32 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Classical swine fever virus;t__ 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Atkinsonella hypoxylon virus;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 44;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage phi2;t__ 0 0 0 0 6 12 0 819 837 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Apple mosaic virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Siegesbeckia yellow vein virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__environmental samples;c__Boiling Springs Lake RNA-DNA hybrid virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 81 81 k__Bacteria;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Intrasporangiaceae;g__Serinicoccus;s__Serinicoccus marinus;t__Serinicoccus marinus DSM 15273 0 0 2 70 8 82 0 67716 67878 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Bean common mosaic necrosis virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 9;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage YMC11/02/R656;t__ 0 0 0 3 0 0 0 1215 1218 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mesta yellow vein mosaic virus;t__ 0 0 0 0 0 9 0 45 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cosavirus;s__Cosavirus B;t__Human cosavirus B 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Marine RNA virus JP-A;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chickpea chlorosis Australia virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Malva mosaic virus;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__unclassified viruses;c__Corey virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Rat bufavirus SY-2015;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__unclassified viruses;c__Marine RNA virus PAL128;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 15;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Pipapillomavirus;s__Pipapillomavirus 1;t__Mastomys coucha papillomavirus 2 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyosigmapapillomavirus;s__Dyosigmapapillomavirus 1;t__Castor canadensis papillomavirus 1 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Grapevine leafroll-associated virus 5;t__ 0 0 0 0 0 4 0 263 267 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Apricot pseudo-chlorotic leaf spot virus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Grapevine Pinot gris virus;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum bright yellow mosaic virus;t__ 0 0 0 0 0 1 0 101 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Pelargonium necrotic spot virus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Turbido;t__Mycobacterium phage Turbido 0 0 0 0 41 0 0 1022 1063 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Echild;t__ 0 0 0 0 0 14 0 1049 1063 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Chicken anemia virus;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou hepe-like virus 1;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pectobacterium phage PP90;t__ 0 0 0 0 0 0 0 891 891 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 1;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 6;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Prtbvirus;s__Brucella virus Tb;t__Brucella phage Tb 0 0 0 0 0 717 0 105 822 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Chipapillomavirus;s__Chipapillomavirus 3;t__Canis familiaris papillomavirus 8 0 0 0 0 0 0 0 155 155 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus B;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Aparavirus;s__Taura syndrome virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Epsilonpapillomavirus;s__Cervus papillomavirus 2;t__ 0 0 0 0 0 0 0 161 161 k__Viruses;p__dsDNA viruses, no RNA stage;c__Salterprovirus;o__;f__;g__;s__His 1 virus;t__ 0 0 0 0 0 0 0 289 289 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Negevirus;s__Wallerfield virus;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 14;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 5;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Vespertiliovirus;s__Spiroplasma virus SkV1CR23x;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Mammalian rubulavirus 5;t__ 0 0 0 0 0 0 0 304 304 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Bat associated cyclovirus 12;t__Bat circovirus POA/2012/II 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Scophthalmus maximus rhabdovirus;t__ 0 0 0 0 0 0 0 229 229 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Badger associated gemykibivirus 1;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe isopoda virus 5;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Sapporo virus;t__Sapovirus GIII 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei arthropod virus 3;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 3;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Humulus japonicus latent virus;t__ 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf distortion virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Maculavirus;s__Culex originated Tymoviridae-like virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 24;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Halastavi arva RNA virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Tulare apple mosaic virus;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Alternanthera yellow vein virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Norwalk virus;t__Norovirus GI 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Siniperca chuatsi rhabdovirus;t__ 0 0 0 0 0 0 0 230 230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GRU1;t__ 0 0 0 0 0 0 0 1315 1315 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Canary polyomavirus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe narna-like virus 3;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Sclerotinia sclerotiorum dsRNA mycovirus-L;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Maize associated totivirus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 12;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Llij;t__ 0 0 0 0 83 614 0 440 1137 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Gooseberry vein banding associated virus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 7;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Megrivirus;s__Melegrivirus A;t__Turkey hepatitis virus 2993D 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Hubei Poty-like virus 1;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Primate bocaparvovirus 1;t__Human bocavirus 3 0 0 0 0 0 1 0 103 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Limnipivirus;s__Limnipivirus C;t__Fathead minnow picornavirus 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Tuhoko rubulavirus 3;t__Tuhoko virus 3 0 0 0 0 0 0 0 304 304 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Aureusvirus;s__Johnsongrass chlorotic stripe mosaic virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei noda-like virus 9;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 14;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 9;t__Human papillomavirus type 129 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__;s__Watermelon virus A;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Parietaria mottle virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Bat sapovirus TLC58/HK;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Primate bocaparvovirus 1;t__Gorilla bocavirus 0 0 0 0 0 0 0 98 98 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Yacon necrotic mottle virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 10;t__Human papillomavirus type 6b 0 0 0 0 0 0 0 158 158 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 26;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Donggang virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__;s__Persimmon virus B;t__ 0 0 0 0 0 0 0 371 371 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Raccoon polyomavirus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Lepidopteran ambidensovirus 1;t__Junonia coenia densovirus 0 0 0 0 0 0 1 119 120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Ochlerotatus caspius flavivirus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 9;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hunnivirus;s__Norway rat hunnivirus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 5;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 17;t__ 28 0 0 0 0 0 0 6 34 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan fly virus 4;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 3;t__Dendrolimus punctatus densovirus 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Septima3virus;s__Burkholderia virus KL1;t__Burkholderia phage KL1 0 0 0 0 0 0 0 856 856 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Canine papillomavirus 16;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Henipavirus;s__Mojiang henipavirus;t__Mojiang virus 0 0 0 0 0 0 0 368 368 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Sequivirus;s__Parsnip yellow fleck virus;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Khujand lyssavirus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 3;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Soybean mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Edge Hill virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__Hepatitis C virus genotype 3 0 0 0 0 0 0 0 189 189 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cotton leaf curl virus associated DNA 1 isolate Lucknow;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Dumbo;t__ 0 0 0 0 1198 78 0 238 1514 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Lymphocytic choriomeningitis mammarenavirus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 14;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Gorilla anellovirus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Venezuelan equine encephalitis virus;t__ 0 0 0 0 0 0 0 228 228 k__Viruses;p__dsDNA viruses, no RNA stage;c__Fuselloviridae;o__;f__;g__Alphafusellovirus;s__Sulfolobus spindle-shaped virus 4;t__ 0 0 0 0 0 0 0 302 302 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus B;t__Bovine adeno-associated virus 0 0 0 0 0 0 0 93 93 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Glutamicibacter;s__Glutamicibacter halophytocola;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__White clover mottle virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tm4virus;s__Mycobacterium phage Larva;t__ 0 0 0 0 0 0 0 1259 1259 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Java betasatellite;t__Tomato leaf curl Java virus-[Ageratum] satellite DNA 0 0 0 0 0 1 0 26 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Luna mammarenavirus;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Avon-Heathcote estuary associated bacilladnavirus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Velveteen;t__ 0 0 0 0 342 205 0 539 1086 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Pseudomonas phage MP48;t__ 0 0 0 0 539 120 0 77 736 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage MP29;t__ 0 0 0 0 321 232 0 179 732 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD88a;t__ 0 0 0 0 1 0 0 721 722 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Strawberry necrotic shock virus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei hepe-like virus 2;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Latino mammarenavirus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Seadornavirus;s__Kadipiro virus;t__ 0 0 0 0 0 0 0 398 398 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 11;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P91;t__Propionibacterium phage P9.1 0 0 0 0 0 60 0 524 584 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Fritillary virus Y;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Pepper yellow mosaic virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 17;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato yellow leaf curl betasatellite;t__ 0 0 0 0 0 2 0 25 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 7;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Human coronavirus 229E;t__ 0 0 0 0 0 0 0 546 546 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Vesivirus ferret badger/JX12/China/2012;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unclassified viruses;c__Marine RNA virus PAL_E4;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cronartium ribicola mitovirus 2;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Graminella nigrifrons virus 1;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__;s__Blueberry fruit drop associated virus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 4;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 23;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai rhabdo-like virus 1;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 5;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 5;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Diplodia scrobiculata RNA virus 1;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage Che9d;t__ 0 0 0 0 18 25 0 1082 1125 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Seal anellovirus 2;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Trichodysplasia spinulosa-associated polyomavirus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Tomato chlorosis virus;t__ 0 0 0 0 0 0 0 334 334 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Eilat virus;t__ 0 0 0 0 0 0 0 232 232 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Rhinovirus A;t__ 0 0 0 0 0 0 0 143 143 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Thailand virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Synechococcus phage S-CBS1;t__ 0 0 0 0 0 0 0 606 606 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Sweet potato latent virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tobacco leaf curl Yunnan virus satellite DNA beta;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Tamarillo leaf malformation virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__East African cassava mosaic Kenya virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan coneheads virus 2;t__ 0 0 0 0 0 0 0 234 234 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Seal anellovirus 4;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Spilanthes yellow vein virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 21;t__Human papillomavirus 167 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus A;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Abutilon mosaic Brazil virus;t__ 0 0 0 0 0 3 0 100 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__;s__Nectarine stem pitting-associated virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__Influenzavirus A;s__Influenza A virus;t__H5N1 subtype 0 0 0 0 0 0 0 259 259 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage YMC11/07/P54_PAE_BP;t__ 0 0 0 0 0 4 0 999 1003 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Radish mosaic virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacteria phage J8-65;t__ 0 0 0 0 0 0 0 819 819 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus KpV475;t__Klebsiella phage KpV475 0 0 0 0 0 150 0 694 844 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Cycad leaf necrosis virus;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus C;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Tectiviridae;o__;f__;g__Tectivirus;s__Salmonella virus PRD1;t__ 0 0 0 0 0 0 0 298 298 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mosaic Bolivia virus 2;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Alphatetraviridae;g__Betatetravirus;s__Nudaurelia capensis beta virus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__American plum line pattern virus;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Pg1;t__Mycobacterium phage Orion 0 0 0 0 1 1046 0 321 1368 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 26;t__ 0 0 0 0 0 0 0 45 45 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Pasteurellales;f__Pasteurellaceae;g__Gallibacterium;s__Gallibacterium anatis;t__Gallibacterium anatis UMN179 0 0 0 0 0 0 0 128 136 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium graminearum dsRNA mycovirus-3;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PAC1;t__ 0 0 0 0 148 3 0 441 592 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HRTV-7;t__ 0 0 0 0 0 348 0 1032 1380 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Tamus red mosaic virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 107;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Wuhan Tick Virus 2;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Discula destructiva virus 1;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Canine papillomavirus 9;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Iran virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__Labyrnavirus;s__Aurantiochytrium single-stranded RNA virus 01;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 53;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Tobacco vein banding mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 75;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 5;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Shadadpur virus;t__ 0 0 0 0 0 18 0 36 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Kokhran virus;t__ 0 0 0 0 0 0 0 54 54 k__BacteriaPlasmid;p__Proteobacteria;c__Deltaproteobacteria;o__Syntrophobacterales;f__Syntrophaceae;g__Desulfomonile;s__Desulfomonile tiedjei;t__Desulfomonile tiedjei DSM 6799 0 0 0 0 0 0 0 538 538 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 12;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Vibrio phage Vf12;t__Vibrio phage Vf33 0 0 0 0 0 5 0 154 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei unio douglasiae virus 3;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Schlumbergera virus X;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage SweetiePie;t__ 0 0 0 0 16 27 0 1020 1063 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 82;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium poae mycovirus 2;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 9;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Tobacco ringspot virus;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ff47virus;s__Mycobacterium virus Ff47;t__Mycobacterium phage vB_MapS_FF47 0 0 0 0 0 0 0 954 954 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Pityohyphantes rubrofasciatus iflavirus;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tobacco mild green mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsRNA viruses;c__Endornaviridae;o__;f__;g__Alphaendornavirus;s__Hot pepper alphaendornavirus;t__ 0 0 0 0 0 0 0 294 294 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato rugose mosaic virus;t__ 0 0 0 0 0 15 0 87 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Hepatovirus;s__Shrew hepatovirus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 18;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Paprika mild mottle virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL179M00;t__Propionibacterium phage PHL179M00 0 0 0 0 11 90 0 487 588 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Culiseta flavivirus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 3;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling tombus-like virus 2;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-31;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Mink calicivirus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 9;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 37;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 47;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 51;t__ 0 0 0 0 0 0 0 253 253 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Trichovirus;s__Apple chlorotic leaf spot virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage Yep-phi;t__ 0 0 0 0 0 462 0 310 772 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 6;t__ 0 0 0 0 0 0 0 174 174 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium casei;t__Corynebacterium casei LMG S-19264 0 0 0 0 0 0 0 370 372 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Bole Tick Virus 3;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 1;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mosaic Havana virus;t__Tomato mosaic Havana virus-[Quivican] 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow mosaic Yucatan virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__BtRf-AlphaCoV/YN2012;t__ 0 0 0 0 0 10 0 529 539 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Limnipivirus;s__Limnipivirus B;t__Carp picornavirus 1 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified viruses;c__Nylanderia fulva virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Saccharomyces cerevisiae virus L-A;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Tortoise picornavirus;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Rhynchosia mild mosaic virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Soybean chlorotic spot virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Gallivirus;s__Gallivirus A;t__Turkey gallivirus 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Helicoverpa armigera iflavirus;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mollusks virus 2;t__ 0 0 0 0 0 0 0 181 181 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__Bacillarnavirus;s__Chaetoceros socialis f. radians RNA virus 01;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Pigeon picornavirus B;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Strawberry pallidosis-associated virus;t__ 0 0 0 0 0 0 0 161 161 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobravirus;s__Pepper ringspot virus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tick virus 2;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sphaeromadae virus 4;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 3;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia atyid shrimp virus 1;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Grapevine Anatolian ringspot virus;t__ 0 0 0 0 0 0 0 236 236 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 19;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen2266_11;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai zhaovirus-like virus 4;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Murray Valley encephalitis virus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__unclassified virophages;c__Yellowstone Lake virophage 5;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 595 595 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Rousettus aegyptiacus polyomavirus 1;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Mimosa yellow leaf curl virus satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco yellow crinkle virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 16;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Quang Binh virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ab18virus;s__Pseudomonas virus PaMx11;t__Pseudomonas phage PaMx11 0 0 0 0 0 0 0 1197 1197 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Sida yellow vein virus satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 7;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Lammi virus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein China virus;t__Ageratum yellow vein China virus - [Hn2] 0 0 0 0 0 5 0 50 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Feline associated cyclovirus 1;t__Feline cyclovirus 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-31;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL071N05;t__Propionibacterium phage PHL071N05 0 0 0 0 1 80 0 508 589 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 9;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Blue squill virus A;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp34virus;s__Klebsiella virus KpV71;t__Klebsiella phage KpV71 0 0 0 0 0 195 0 670 865 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Potato leafroll virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chickpea yellow dwarf virus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Banana streak GF virus;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage DD5;t__ 0 0 0 0 183 141 0 708 1032 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Edtherson;t__ 0 0 0 0 212 371 0 446 1029 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Seabiscuit;t__ 0 0 0 0 257 368 0 410 1035 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Posavirus 1;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage B3;t__ 0 0 0 0 0 0 0 768 768 k__Viruses;p__unclassified viruses;c__Sewage-associated circular DNA virus-2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__;s__J-virus;t__ 0 0 0 0 0 0 0 379 379 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__American hop latent virus;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halorubrum phage HF2;t__ 0 0 0 0 0 1190 0 363 1553 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 22;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Bean leafroll virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei zhaovirus-like virus 2;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tropical soda apple mosaic virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Simian torque teno virus 34;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Palm Creek virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei mosquito virus 2;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage PPPL-1;t__ 0 0 0 0 0 0 0 822 822 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-4;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang hepe-like virus 1;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Pseudomonas phage Pf1;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified viruses;c__Phomopsis longicolla circular virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage 285P;t__ 0 0 0 0 0 33 0 752 785 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Pan troglodytes polyomavirus 8;t__Pan troglodytes verus polyomavirus 8 0 0 0 0 1 0 0 102 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Lagovirus;s__Rabbit hemorrhagic disease virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 2;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 6;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 11;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage ReqiPine5;t__ 0 0 0 0 0 0 0 1184 1184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Cheetobro;t__ 0 0 0 0 377 0 0 768 1145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage Syn5;t__ 0 0 0 0 0 0 0 924 924 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 37;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Sugarcane yellow leaf virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Dianthovirus;s__Sweet clover necrotic mosaic virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Aphthovirus;s__Bovine rhinitis B virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage H70;t__ 0 0 0 0 222 110 0 415 747 k__Viruses;p__Genomoviridae;c__Gemykrogvirus;o__;f__;g__;s__Caribou associated gemykrogvirus 1;t__Caribou feces-associated gemycircularvirus 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Mischivirus;s__Mischivirus A;t__Miniopterus schreibersii picornavirus 1 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Po-Circo-like virus;t__Po-Circo-like virus 21 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 7;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tomato mottle mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Miniopterus bat coronavirus HKU8;t__ 0 0 0 0 0 0 0 575 575 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Bear Canyon mammarenavirus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P100D;t__Propionibacterium phage P100D 0 0 0 0 2 109 0 479 590 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Dengue virus;t__Dengue virus 4 0 0 0 0 0 0 0 212 212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Etapapillomavirus;s__Etapapillomavirus 1;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Escherichia phage 64795_ec1;t__ 0 0 0 0 48 0 0 736 784 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 22;t__ 0 0 0 0 0 0 0 61 61 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas hengshuiensis;t__ 0 0 0 0 0 0 0 737 737 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Hajipur betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Nanovirus;s__Faba bean necrotic yellows virus;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Salmonella phage BP12A;t__ 0 0 0 0 0 55 0 738 793 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Yvonnetastic;t__ 0 0 0 0 0 0 0 1962 1962 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__;s__Orsay virus;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Rubus yellow net virus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Hantaviridae;g__Orthohantavirus;s__Montano orthohantavirus;t__Montano virus 0 0 0 0 0 0 0 239 239 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Irkut lyssavirus;t__ 0 0 0 0 0 2 0 237 239 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 21;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 30;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 45;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Chordovirus;s__Carrot Ch virus 1;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 14;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Synechococcus phage S-CBP3;t__ 0 7 0 0 0 0 0 910 917 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Potato virus Y;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Bovine leukemia virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Potato Virus P;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Pleione 0 0 0 1 124 43 2803 140 3111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Synechococcus phage S-CBP42;t__ 0 0 0 0 0 0 0 904 904 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Zantedeschia mild mosaic virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Ophiostoma mitovirus 6;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Aquareovirus;s__Aquareovirus C;t__ 0 0 0 0 0 0 0 454 454 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Upsilonpapillomavirus;s__Upsilonpapillomavirus 2;t__Tursiops truncatus papillomavirus 2 0 0 0 0 0 0 0 157 157 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum yellow vein Singapore alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 6;t__Human papillomavirus type 101 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Solid;t__Propionibacterium phage Solid 0 0 0 0 6 103 0 479 588 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Andean potato mild mosaic virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Oliveros mammarenavirus;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Bangladesh betasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__;g__;s__Chaetoceros tenuissimus RNA virus type-II;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 4;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 72;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 41;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Eragrostis minor streak virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 5;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Vibrio phage phi-A318;t__ 0 0 0 0 0 0 0 850 850 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Maize streak virus;t__Maize streak virus - A[Ama] 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Bornaviridae;g__Bornavirus;s__Passeriform 1 bornavirus;t__Canary bornavirus 1 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Nyamiviridae;g__Socyvirus;s__Soybean cyst nematode socyvirus;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Seal anellovirus TFFN/USA/2006;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Primate T-lymphotropic virus 1;t__Human T-lymphotropic virus 1 0 0 0 0 0 0 2 168 170 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kokobera virus;t__New Mapoon virus 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Taupapillomavirus;s__Felis catus papillomavirus 4;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Measles morbillivirus;t__ 0 0 0 0 0 0 0 317 317 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome RW-B;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Cucumovirus;s__Cucumber mosaic virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Barley yellow dwarf virus-GAV;t__ 0 0 0 0 0 2 0 111 113 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Hp1virus;s__Aeromonas virus phiO18P;t__ 0 0 0 0 0 0 0 679 679 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Vesicular exanthema of swine virus;t__Walrus calicivirus 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Clavibacter phage CMP1;t__ 0 0 0 0 0 0 0 1173 1173 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 25;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Ustilaginoidea virens partitivirus 2;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage CarolAnn;t__ 0 0 0 0 0 64 0 1019 1083 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL114L00;t__Propionibacterium phage PHL114L00 0 0 0 0 10 9 0 570 589 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sneeze;t__ 0 0 0 0 100 38 0 710 848 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Conspiracy;t__ 0 0 0 0 0 813 0 202 1015 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Washington bat picornavirus;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage BaxterFox;t__ 0 0 0 0 0 250 0 824 1074 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Glutamicibacter;s__Glutamicibacter arilaitensis;t__Glutamicibacter arilaitensis Re117 0 0 0 0 0 0 0 1026 1176 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HCTV-2;t__ 0 0 0 0 0 0 0 1085 1085 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__TTV-like mini virus;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Gordonia phage GMA7;t__ 0 0 0 330 0 0 0 1138 1468 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Yuavirus;s__Pseudomonas virus MP1412;t__Pseudomonas phage MP1412 0 0 0 0 0 242 0 981 1223 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Pirital mammarenavirus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium phage Porky;t__ 0 0 0 0 2 1085 0 439 1526 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 20;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 2;t__Human papillomavirus type 9 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage 119X;t__ 0 0 0 0 0 139 0 728 867 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus GyV3;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Porcine bocavirus;t__ 0 0 0 0 0 2 0 103 105 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Arrabida virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Dandelion;t__Mycobacterium phage Dandelion 0 0 0 1 100 2198 0 852 3151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage SG4;t__ 0 0 0 0 390 282 0 508 1180 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Promicromonosporaceae;g__Xylanimonas;s__Xylanimonas cellulosilytica;t__Xylanimonas cellulosilytica DSM 15894 0 0 0 0 0 0 0 1772 1772 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas;s__Sphingomonas melonis;t__Sphingomonas melonis TY 0 0 0 0 0 0 0 805 805 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GAL1;t__ 0 0 0 0 0 0 0 999 999 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Avulavirus;s__Avian avulavirus 12;t__ 0 0 0 0 0 0 0 306 306 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Escherichia virus K1E;t__ 0 0 0 0 0 0 0 905 905 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Helicobasidium mompa totivirus 1-17;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 8;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Coniothyrium minitans RNA virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 15;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou yanvirus-like virus 1;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Cucurbita;t__ 0 0 0 0 1286 0 0 567 1873 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Sclerotium hydrophilum virus 1;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Morganella phage MmP1;t__ 0 0 0 0 0 0 0 769 769 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 23;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Grapevine roditis leaf discoloration-associated virus;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Amdoparvovirus;s__Carnivore amdoparvovirus 1;t__Aleutian mink disease virus 0 0 0 0 0 0 0 96 96 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Ruegeria phage DSS3-P1;t__ 0 0 0 0 0 0 0 1192 1192 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL055;t__Propionibacterium phage PHL055N00 0 0 0 0 78 2 0 505 585 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL116M00;t__Propionibacterium phage PHL116M00 0 0 0 0 5 31 0 551 587 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Zucchini tigre mosaic virus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Treiszetapapillomavirus;s__Treiszetapapillomavirus 1;t__Fulmarus glacialis papillomavirus 1 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Tetraparvovirus;s__Ungulate tetraparvovirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium poae dsRNA virus 3;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Emilia yellow vein virus;t__Emilia yellow vein virus-[Fz1] 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 5;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 25;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow spot virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Armigeres subalbatus virus SaX06-AK20;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Gaiavirus;s__Mycobacterium virus Gaia;t__Mycobacterium phage Gaia 0 0 0 0 16 0 0 1793 1809 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Ophioviridae;g__Ophiovirus;s__Citrus psorosis virus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Pegivirus A;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Betanodavirus;s__Barfin flounder nervous necrosis virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Desmodus rotundus polyomavirus 1;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Deltapartitivirus;s__Pepper cryptic virus 2;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Grapevine red-blotch associated virus;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Peach rosette mosaic virus;t__ 0 0 0 0 0 0 0 277 277 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 12;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai mantis shrimp virus 6;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Zygocactus virus X;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Human astrovirus;t__ 0 0 0 0 0 0 0 136 136 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Hippeastrum mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Eidolon helvum papillomavirus 2;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Parechovirus;s__Ljungan virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__Virus-associated RNAs;c__Cucurbit aphid borne yellows virus associated RNA;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Pelarspovirus;s__Pelargonium ringspot virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sporobolus striate mosaic virus 2;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Crinivirus;s__Blackberry yellow vein-associated virus;t__ 0 0 0 0 0 0 0 312 312 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Morbillivirus;s__Cetacean morbillivirus;t__Dolphin morbillivirus 0 0 0 0 0 0 0 314 314 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage Yepe2;t__ 0 0 0 0 0 335 0 438 773 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling nido-like virus 1;t__ 0 0 0 0 0 0 0 494 494 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 31;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Japanese eel endothelial cells-infecting virus;t__ 0 0 0 0 0 0 0 302 302 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Fri1virus;s__Acinetobacter virus Fri1;t__Acinetobacter phage Fri1 0 0 0 0 2 85 0 749 836 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Abrogate;t__ 0 0 0 0 260 409 0 381 1050 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Hepandensovirus;s__Decapod hepandensovirus 1;t__Fenneropenaeus chinensis hepandensovirus 0 0 0 0 0 0 0 121 121 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Alphanodavirus;s__Flock house virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Phinally;t__ 0 0 0 0 0 0 0 1185 1185 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus JAMaL;t__Mycobacterium phage JAMaL 0 0 0 0 0 211 0 1205 1416 k__BacteriaPlasmid;p__Planctomycetes;c__Phycisphaerae;o__Phycisphaerales;f__Phycisphaeraceae;g__Phycisphaera;s__Phycisphaera mikurensis;t__Phycisphaera mikurensis NBRC 102666 0 0 0 0 0 0 0 1623 1623 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Xanthophyllomyces dendrorhous virus L1A;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 10;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage Eremos 0 0 0 0 15 747 426 181 1369 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Morganella phage vB_MmoP_MP2;t__ 0 0 0 0 6 0 0 786 792 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Cronobacter phage vB_CskP_GAP227;t__ 0 0 0 0 0 0 0 835 835 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Carnivore protoparvovirus 1;t__Feline panleukopenia virus 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 15;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__unclassified viruses;c__Planaria asexual strain-specific virus-like element type 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Lucky10;t__ 0 0 0 0 0 0 0 859 859 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Eimeria tenella RNA virus 1;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Bivalve RNA virus G5;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pectobacterium phage PP16;t__ 0 0 0 0 0 0 0 878 878 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Honeysuckle yellow vein mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 26;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Sheep faeces associated smacovirus 1;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyozetapapillomavirus;s__Dyozetapapillomavirus 1;t__Caretta caretta papillomavirus 1 0 0 0 0 0 0 0 140 140 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage LPB1;t__ 0 0 0 0 265 166 0 305 736 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces reticuli;t__ 0 0 0 0 0 0 0 19635 19642 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Burkholderia phage AH2;t__ 0 0 0 0 0 0 0 1161 1161 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Fig badnavirus 1;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage F10;t__ 0 0 0 0 0 0 0 783 783 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Bxb1;t__ 0 0 0 0 279 255 0 476 1010 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyolambdapapillomavirus;s__Dyolambdapapillomavirus 1;t__Bettongia penicillata papillomavirus 1 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage phiYeO3-12;t__ 0 0 0 0 0 36 0 755 791 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cowpea polerovirus 1;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Alphapleolipovirus;s__Halorubrum virus HRPV-2;t__Halorubrum pleomorphic virus 2 0 0 0 0 0 0 0 213 213 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sipunculid worm virus 1;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__unclassified viruses;c__Llama faeces associated circular DNA virus-1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Hepandensovirus;s__Decapod hepandensovirus 1;t__Penaeus monodon hepandensovirus 1 0 0 0 0 0 0 0 126 126 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__;s__Potato necrosis virus;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__;s__Santeuil nodavirus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Mungbean yellow mosaic India virus associated betasatellite [India: Faizabad: Cow Pea:2012];t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Flexal mammarenavirus;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Chilli ringspot virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 10;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-18;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Deltapapillomavirus;s__Deltapapillomavirus 3;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sea slater virus 1;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Wizzo;t__Propionibacterium phage Wizzo 0 0 0 0 12 107 0 470 589 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 7;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Citrobacter phage CVT22;t__ 0 0 0 0 0 0 0 952 952 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ipomoea yellow vein virus;t__ 0 0 0 0 0 2 0 53 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 27;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Pirate;t__Propionibacterium phage Pirate 0 0 0 0 26 126 0 434 586 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 6;t__Human papillomavirus type 53 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__East African cassava mosaic Zanzibar virus;t__ 0 0 0 0 0 5 0 50 55 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Simian rubulavirus;t__ 0 0 0 0 0 0 0 308 308 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Alphapapillomavirus;s__Alphapapillomavirus 3;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__;g__;s__Fusarium graminearum deltaflexivirus 1;t__ 0 0 0 0 0 0 0 164 164 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Suakwa aphid-borne yellows virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao toti-like virus;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P101A;t__Propionibacterium phage P101A 0 0 0 0 0 17 0 574 591 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Euphorbia yellow mosaic virus associated DNA 1;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Citrobacter phage SH4;t__ 0 0 0 0 86 9 0 690 785 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Narcissus mosaic virus;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 1;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Cameroon virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bitter gourd yellow vein virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Lily virus X;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__St. Louis encephalitis virus;t__ 0 0 0 0 0 0 0 218 218 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Pune virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tobacco leaf curl betasatellite;t__Tobacco leaf curl disease associated sequence 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Serenity;t__ 0 0 0 0 12 1 0 1028 1041 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 4;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Gumball;t__ 0 0 0 0 194 382 0 720 1296 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Nairoviridae;g__Orthonairovirus;s__Nairobi sheep disease orthonairovirus;t__Nairobi sheep disease virus 0 0 0 0 0 0 0 371 371 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Woesvirus;s__Gordonia virus Woes;t__Gordonia phage Woes 0 0 0 0 0 0 0 1475 1475 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bcepmuvirus;s__Burkholderia virus BcepMu;t__ 0 0 0 0 0 8 0 726 734 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Escherichia virus K30;t__Escherichia phage K30 0 0 0 0 0 4 0 814 818 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Hydrangea ringspot virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus C;t__Porcine kobuvirus 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Macrosiphum euphorbiae virus 1;t__ 0 0 0 0 0 0 0 455 455 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Smoothievirus;s__Gordonia virus Bachita;t__Gordonia phage Bachita 0 0 0 0 310 1077 0 489 1876 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Lagovirus;s__European brown hare syndrome virus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium phage DeadP;t__ 0 0 0 0 367 652 0 110 1129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 75;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei orthoptera virus 4;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Poplar mosaic virus;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Penicillium stoloniferum virus S;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL070N00;t__Propionibacterium phage PHL070N00 0 0 0 0 0 20 0 568 588 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage Moyashi;t__ 0 0 0 0 127 9 0 449 585 k__BacteriaPlasmid;p__Chlamydiae;c__Chlamydiia;o__Chlamydiales;f__Chlamydiaceae;g__Chlamydia;s__Chlamydia suis;t__Chlamydia suis MD56 0 0 0 0 0 0 0 119 119 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 21;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 32;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cotton leaf curl Multan virus satellite U36-1;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bos taurus papillomavirus 17;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Passion fruit mosaic virus;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Klebsiella virus Kp1;t__Klebsiella phage vB_Kp1 0 0 0 0 0 49 0 753 802 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Jatropha leaf crumple virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 2;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__;g__;s__Sinorhizobium phage PBC5;t__ 0 0 0 0 0 0 0 1148 1148 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 40;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus ATCC29399BC;t__Propionibacterium phage ATCC29399B_C 0 0 0 0 0 29 0 561 590 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Actinomyces virus Av1;t__ 0 0 0 0 0 0 0 343 343 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai echinoderm virus 1;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__;s__Morogoro mammarenavirus;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Sicyonia brevirostris associated circular virus;t__ 0 0 0 0 0 0 0 31 31 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL112N00;t__Propionibacterium phage PHL112N00 0 0 0 0 1 93 0 491 585 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL113M01;t__Propionibacterium phage PHL113M01 0 0 0 0 1 102 0 480 583 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL152M00;t__Propionibacterium phage PHL152M00 0 0 0 0 10 12 0 562 584 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL085;t__Propionibacterium phage PHL085N00 0 0 0 0 54 11 0 524 589 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 25;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus J;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__;g__;s__Rhizoctonia solani flexivirus 1;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Garlic common latent virus;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Rosavirus;s__Rosavirus A;t__Rosavirus A2 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Tacheng Tick Virus 6;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Botrytis cinerea mitovirus 4;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 44;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Waikavirus;s__Bellflower vein chlorosis virus;t__ 0 0 0 0 0 0 0 232 232 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Phix174microvirus;s__Enterobacteria phage phiX174 sensu lato;t__ 0 0 0 0 0 0 0 10 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai blue swimmer crab virus 1;t__ 0 0 0 0 0 0 0 249 249 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 37;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage Gizmo 0 0 0 1 121 34 2645 348 3149 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__West African Asystasia virus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Beet ringspot virus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage LKD16;t__ 0 0 0 0 0 87 0 776 863 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage BuzzLyseyear;t__ 0 0 0 0 390 141 0 657 1188 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus X;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Lamina13;t__ 0 0 0 0 217 548 0 300 1065 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Jasper;t__ 0 0 0 0 207 109 0 703 1019 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Spissistilus festinus reovirus;t__ 0 0 0 0 0 0 0 483 483 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 10;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__;s__Goose calicivirus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium virus Taj;t__Mycobacterium phage Taj 0 0 0 0 351 79 0 740 1170 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Blosnavirus;s__Blotched snakehead virus;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__dsRNA viruses;c__Quadriviridae;o__;f__;g__Quadrivirus;s__Rosellinia necatrix quadrivirus 1;t__ 0 0 0 0 0 0 0 336 336 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 6;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Quico;t__ 0 0 0 0 207 766 0 200 1173 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphanecrovirus;s__Olive mild mosaic virus;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Sheldgoose hepatitis B virus;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Peribunyaviridae;g__;s__Hunter Island virus;t__ 0 0 0 0 0 0 0 222 222 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-11;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe isopoda virus 1;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Red clover cryptic virus 1;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Papaya leaf curl virus;t__ 0 0 0 0 0 2 0 52 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Omnicron;t__ 0 0 0 0 0 0 0 1230 1230 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Contagion;t__ 0 0 0 0 1135 316 0 39 1490 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 32;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 3;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kelleziovirus;s__Arthrobacter virus Kitkat;t__Arthrobacter phage Kitkat 0 0 0 0 0 0 0 1171 1171 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Western equine encephalitis virus;t__ 0 0 0 0 0 0 0 229 229 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micromonosporales;f__Micromonosporaceae;g__Verrucosispora;s__Verrucosispora maris;t__Verrucosispora maris AB-18-032 0 0 0 0 0 0 0 1165 1165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Lelliottia phage phD2B;t__ 0 0 0 0 0 0 0 887 887 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Cassava virus X;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Chronic bee paralysis virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Actinidia virus X;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Dipteran ambidensovirus 1;t__Culex pipiens densovirus 0 0 0 0 0 0 0 115 115 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cryphonectria parasitica mitovirus 1-NB631;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Brome streak mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Powassan virus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Obliviate;t__ 0 0 0 0 0 69 0 916 985 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Sabia mammarenavirus;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__N4virus;s__Pseudomonas phage Pa2;t__ 0 0 0 0 675 0 0 785 1460 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Razdan virus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage FlagStaff;t__ 0 0 0 0 0 1 0 890 891 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Pasivirus;s__Pasivirus A;t__Pasivirus A1 0 0 0 0 0 0 0 138 138 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 4 0 0 0 0 0 0 1 94 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Nebovirus;s__Bovine calicivirus strain Kirklareli;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified viruses;c__Wabat virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 243 243 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sparky;t__ 0 0 0 0 61 0 0 1205 1266 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Hedwig;t__ 0 0 0 0 0 11 0 879 890 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 12;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Avisivirus;s__Avisivirus B;t__Chicken picornavirus 2 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Maize streak Reunion virus;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Ampelovirus;s__Blackberry vein banding associated virus;t__ 0 0 0 0 0 0 0 372 372 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__;s__Rat arterivirus Jilin2014;t__ 0 0 0 0 0 0 0 314 314 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 1;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Penicillium aurantiogriseum partitivirus 1;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Petuvirus;s__Petunia vein clearing virus;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Bovine faeces associated smacovirus 6;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PAD20;t__Propionibacterium phage PAD20 0 0 0 0 0 21 0 560 581 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Decurrovirus;s__Arthrobacter virus Decurro;t__Arthrobacter phage Decurro 0 0 0 0 0 0 0 310 310 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Murucutumbu;t__ 0 0 0 0 51 0 0 1161 1212 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Splinter;t__ 0 0 0 0 0 913 0 4 917 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Vendetta;t__ 0 0 0 0 0 0 0 917 917 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Blue7;t__ 0 0 0 0 0 0 0 1045 1045 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phatniss;t__ 0 0 0 0 825 167 0 153 1145 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Opsiphanes invirae iflavirus 1;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Graduation;t__ 0 0 0 0 227 284 0 545 1056 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium phage Cjw1;t__ 0 0 0 0 0 928 0 590 1518 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Gordoniaceae;g__Gordonia;s__Gordonia polyisoprenivorans;t__Gordonia polyisoprenivorans VH2 0 0 0 0 0 0 0 3402 3489 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Ralstonia phage RSJ5;t__ 0 0 0 0 0 0 0 874 874 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Fusarium solani virus 1;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Olive latent virus 3;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Soybean leaf-associated gemycircularvirus 1;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Cheravirus;s__Currant latent virus;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Arumowot virus;t__ 0 0 0 0 0 0 0 241 241 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage phi297;t__ 0 0 0 10 31 3 0 938 982 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage PhrostyMug;t__ 0 0 0 0 220 639 0 213 1072 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Alsfro;t__ 0 0 0 0 212 236 0 594 1042 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 4;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Obuda pepper virus;t__ 0 0 0 0 0 0 0 130 130 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Bradyrhizobiaceae;g__Rhodopseudomonas;s__Rhodopseudomonas palustris;t__Rhodopseudomonas palustris CGA009 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Xp10virus;s__Xanthomonas phage CP1;t__ 0 0 0 0 0 0 0 877 877 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces niveus;t__Streptomyces niveus NCIMB 11891 0 0 0 0 0 0 0 4095 4104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Rosavirus;s__Rosavirus B;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein virus;t__ 0 0 0 0 0 11 0 43 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage CRB1;t__ 0 0 0 0 0 0 0 1059 1059 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus F;t__Possum enterovirus W1 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Peach virus D;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 18;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phic31virus;s__Streptomyces phage phiC31;t__ 0 0 0 0 0 0 0 829 829 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Kudzu mosaic virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Goku;t__ 0 0 0 0 911 124 0 494 1529 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Grapevine chrome mosaic virus;t__ 0 0 0 0 0 0 0 231 231 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Maculavirus;s__Grapevine fleck virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Rufus;t__ 0 0 0 0 210 343 0 494 1047 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 5;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 33;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 16;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage mu1/6;t__ 0 0 0 0 0 0 0 763 763 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Honeysuckle yellow vein betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Trike;t__ 0 0 0 0 0 355 0 539 894 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Rhodococcus phage RGL3;t__ 0 0 0 0 0 0 0 961 961 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Lolavirus;s__Lolium latent virus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia narna-like virus 1;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Salivirus;s__Salivirus A;t__ 0 0 0 0 0 0 0 159 159 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aliiroseovarius;s__Aliiroseovarius crassostreae;t__ 0 0 0 0 0 0 0 355 370 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 9;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Okra yellow vein disease associated sequence;t__ 0 0 0 0 0 13 0 13 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Piliocolobus rufomitratus polyomavirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Bruns;t__ 0 0 0 0 377 308 0 375 1060 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Canine papillomavirus 10;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Mycoreovirus;s__Mycoreovirus 3;t__ 0 0 0 0 0 0 0 473 473 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Idaeovirus;s__Privet leaf blotch-associated virus;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling sobemo-like virus 2;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Fishburnevirus;s__Mycobacterium virus Fishburne;t__Mycobacterium phage Fishburne 0 0 0 0 52 0 0 890 942 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Adawi;t__Mycobacterium phage Adawi 0 0 0 0 0 66 0 1338 1404 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Cheravirus;s__Cherry rasp leaf virus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sipunculid worm virus 3;t__ 0 0 0 0 0 20 0 162 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Azospirillum phage Cd;t__ 0 0 0 0 0 0 0 1246 1246 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Cryphonectria hypovirus 4;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage LUZ19;t__ 0 0 0 0 0 258 0 612 870 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Kugel;t__ 0 0 0 0 210 153 0 684 1047 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Melon aphid-borne yellows virus;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome SAR-B;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphanecrovirus;s__Olive latent virus 1;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Catalina;t__ 0 0 0 0 219 284 0 565 1068 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Citrobacter phage SH1;t__ 0 0 0 0 7 242 0 539 788 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Asystasia mosaic Madagascar virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Tritimovirus;s__Tall oatgrass mosaic virus;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato severe rugose virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei macula-like virus 1;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Negevirus;s__Negev virus;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic stunt alphasatellite 2;t__ 0 0 0 0 0 0 0 19 19 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium doosanense;t__Corynebacterium doosanense CAU 212 = DSM 45436 0 0 0 0 0 0 0 481 543 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage phikF77;t__ 0 0 0 0 4 164 0 695 863 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Zirinka;t__ 0 0 0 0 0 398 0 643 1041 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl virus;t__ 0 0 0 0 0 31 0 24 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Tadarida brasiliensis polyomavirus 2;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 12;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Radish leaf curl betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 19;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Prunus necrotic ringspot virus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 6;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__White clover mosaic virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Betapleolipovirus;s__Halorubrum virus HRPV-3;t__Halorubrum pleomorphic virus 3 0 0 0 0 0 0 0 175 175 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Suffolk;t__Mycobacterium phage Suffolk 0 0 0 0 1 683 395 286 1365 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage REQ1;t__ 0 0 0 0 0 0 0 1026 1026 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HSTV-1;t__ 0 0 0 0 0 0 0 643 643 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phrann;t__ 0 0 0 0 419 82 0 396 897 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Cambiare;t__ 0 0 0 0 0 0 0 903 903 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage TL;t__ 0 0 0 0 144 15 0 754 913 k__Viruses;p__Genomoviridae;c__Gemytondvirus;o__;f__;g__;s__Ostrich associated gemytondvirus 1;t__Faeces associated gemycircularvirus 12 0 0 0 0 0 0 0 42 42 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage HINdeR;t__ 0 0 0 0 0 0 0 1052 1052 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Nymphadora;t__ 0 0 0 0 0 2 0 1066 1068 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Pomovirus;s__Potato mop-top virus;t__ 0 0 0 0 0 0 0 238 238 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Allolevivirus;s__Enterobacteria phage FI sensu lato;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JBD24;t__ 0 0 0 0 255 99 0 387 741 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Pseudomonas phage JD024;t__ 0 0 0 0 166 324 0 257 747 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phaedrus;t__ 0 0 0 0 269 0 0 1092 1361 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-43;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Yuavirus;s__Pseudomonas virus PAE1;t__Pseudomonas phage PAE1 0 0 0 0 0 475 0 768 1243 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Raphanus sativus cryptic virus 3;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Catdawg;t__ 0 0 0 0 591 51 0 800 1442 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-49;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Chayote mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Faeces associated gemycircularvirus 1;t__Faecal-associated gemycircularvirus 1a 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Anulavirus;s__Pelargonium zonate spot virus;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Leo;t__ 0 0 0 0 496 136 0 167 799 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Macluravirus;s__Artichoke latent virus;t__ 0 0 0 0 0 0 0 165 165 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Corynebacteriaceae;g__Corynebacterium;s__Corynebacterium ureicelerivorans;t__ 0 0 0 0 0 0 0 0 965 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Pg1;t__Mycobacterium phage JacAttac 0 0 0 0 1 1031 144 190 1366 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Cymbidium chlorotic mosaic virus;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phlyer;t__ 0 0 0 0 323 581 0 483 1387 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Gaillardia latent virus;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Dipartevirus;s__Wobbly possum disease virus;t__ 0 0 0 0 0 0 0 242 242 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage RhynO;t__ 0 0 0 0 0 3 0 931 934 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Culex flavivirus;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage AF;t__ 0 0 0 0 0 0 0 853 853 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ydn12virus;s__Streptomyces virus TP1604;t__Streptomyces phage TP1604 0 0 0 0 0 0 0 1143 1143 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pestivirus;s__Bovine viral diarrhea virus 3;t__Bovine viral diarrhea virus 3 Th/04_KhonKaen 0 0 0 0 0 0 0 246 246 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Arthrobacter phage vB_ArS-ArV2;t__ 0 0 0 0 0 0 0 747 747 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 4;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus P1001;t__Propionibacterium phage P100_1 0 0 0 0 0 165 0 427 592 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 13;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cronobacter phage Dev2;t__ 0 0 0 0 1 0 0 778 779 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Ghobes;t__ 0 0 0 0 0 0 0 905 905 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Aiptasia sp. sea anemone associated circular virus;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Aeromonas phage phiAS7;t__ 0 0 0 0 0 0 0 831 831 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Pigeon aviadenovirus A;t__Pigeon adenovirus 1 0 0 0 0 0 0 0 909 909 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 9;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Enterobacter phage E-2;t__ 0 0 0 0 0 87 0 634 721 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Limnipivirus;s__Limnipivirus A;t__Bluegill picornavirus 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Cocksfoot streak virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 26;t__ 0 0 0 0 0 11 0 174 185 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Bearded dragon parvovirus;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Murine leukemia virus;t__unclassified Murine leukemia virus 0 0 0 0 0 7 0 155 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 21;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GTE2;t__ 0 0 0 0 0 0 0 910 910 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage JSwag;t__ 0 0 0 0 181 550 0 323 1054 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 13;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 15;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage UnionJack;t__ 0 0 0 0 0 44 0 939 983 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia sobemo-like virus 4;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phaux;t__ 0 0 0 0 1181 78 0 270 1529 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage vB_PaeP_PPA-ABTNL;t__ 0 0 0 0 3 482 0 379 864 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Pseudonocardiales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia dioxanivorans;t__Pseudonocardia dioxanivorans CB1190 0 0 0 0 0 0 0 4031 4146 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Wenzhou mammarenavirus;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Lambdapapillomavirus;s__Enhydra lutris papillomavirus 1;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Makemake;t__ 0 0 0 0 246 329 0 474 1049 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Tsukamurella phage TPA4;t__ 0 0 0 0 0 0 0 1124 1124 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Equartevirus;s__Equine arteritis virus;t__ 0 0 0 0 0 0 0 254 254 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Cronobacter phage Dev-CD-23823;t__ 0 0 0 0 5 0 0 827 832 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Sclerotinia sclerotiorum mitovirus 6;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Cymbidium mosaic virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Bandicoot papillomatosis carcinomatosis virus type 1;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Sapporo virus;t__Sapovirus GII 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage YMC11/06/C171_PPU_BP;t__ 0 0 0 0 0 0 0 908 908 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage K1F;t__ 0 0 0 0 1 0 0 793 794 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces avermitilis;t__Streptomyces avermitilis MA-4680 = NBRC 14893 0 0 0 0 0 0 0 1832 1885 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Tomato planta macho viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 2;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Tobacco yellow dwarf virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 36;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou sobemo-like virus 2;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium phage Kostya;t__ 0 0 0 0 0 715 0 801 1516 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Sp6virus;s__Pectobacterium phage PP1;t__ 0 0 0 0 0 0 0 887 887 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Botrytis cinerea mitovirus 1;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Sardinia virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Bog5275_51;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 5;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-17;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Oscivirus;s__Oscivirus A;t__Oscivirus A1 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cardiovirus;s__Cardiovirus B;t__Theilovirus 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Nebovirus;s__Newbury-1 virus;t__Calicivirus strain NB 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus D;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__;s__Penaeus vannamei nodavirus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 58;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Rosellinia necatrix partitivirus 6;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Mycobacterium phage Phlei;t__ 0 0 0 0 0 0 0 1008 1008 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyonupapillomavirus;s__Dyonupapillomavirus 1;t__Zalophus californianus papillomavirus 1 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Ross River virus;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean calico mosaic virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__Genomoviridae;c__unclassified Genomoviridae;o__;f__;g__;s__Thrips-associated genomovirus 1;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Alfamovirus;s__Alfalfa mosaic virus;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Calanoida sp. copepod associated circular virus;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Habenivirus;s__Ralstonia virus RSM3;t__Ralstonia phage RSM3 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Trixie;t__Mycobacterium phage Trixie 0 0 0 0 2 1 0 1067 1070 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 65;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Chy5;t__ 0 0 0 0 400 0 0 624 1024 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Kelleziovirus;s__Arthrobacter virus Kellezzio;t__Arthrobacter phage KellEzio 0 0 0 0 0 232 0 945 1177 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Zaka;t__Mycobacterium phage CloudWang3 0 0 0 0 0 374 453 230 1057 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage TheloniousMonk;t__ 0 0 0 0 185 392 0 464 1041 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodovulum phage RS1;t__ 0 0 0 0 0 0 0 804 804 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Peanut stunt virus satellite RNA;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage DS6A;t__ 0 0 0 0 0 0 0 1211 1211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Guacamole;t__ 0 0 0 0 0 0 0 997 997 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling chuvirus-like virus 2;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Turnip ringspot virus;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Shipwreck;t__ 0 0 0 0 454 3 0 516 973 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phic31virus;s__Streptomyces phage phiSASD1;t__ 0 0 0 0 0 0 0 741 741 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Steller sea lion vesivirus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che8virus;s__Mycobacterium virus Wee;t__Mycobacterium phage Wee 0 0 0 0 436 622 0 126 1184 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cleome golden mosaic virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Corynebacterium phage BFK20;t__ 0 0 0 0 0 0 0 859 859 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 28;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Avian endogenous retrovirus EAV-HP;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Anubis;t__ 0 0 0 0 0 795 0 222 1017 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Mosquito Virus 1;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Allamanda leaf mottle distortion virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco curly shoot virus;t__ 0 0 0 0 0 5 0 49 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper leaf curl virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Antarctic picorna-like virus 3;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage EcoDS1;t__ 0 0 0 0 0 27 0 758 785 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Barnaviridae;g__Barnavirus;s__Mushroom bacilliform virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Angel;t__ 0 0 0 0 616 0 0 212 828 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Bovine picornavirus;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou crab virus 5;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Vibriophage VP4;t__ 0 0 0 0 0 0 0 790 790 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Trichomonasvirus;s__Trichomonas vaginalis virus 1;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Leishmaniavirus;s__Leishmania aethiopica RNA virus;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage 13a;t__ 0 0 0 0 0 56 0 720 776 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Bowser;t__ 0 0 0 0 0 0 0 931 931 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Human rubulavirus 2;t__ 0 0 0 0 0 0 0 312 312 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Pepper mild mottle virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Adenoviridae;o__;f__;g__Aviadenovirus;s__Fowl aviadenovirus E;t__ 0 0 0 0 0 0 0 881 881 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tm4virus;s__Mycobacterium phage fionn;t__ 0 0 0 0 0 0 0 1161 1161 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 4;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pipefishvirus;s__Mycobacterium virus Bernardo;t__Mycobacterium phage Bernardo 0 0 0 0 302 462 0 599 1363 k__Viruses;p__unclassified bacterial viruses;c__Propionibacterium phage PFR1;o__;f__;g__;s__;t__ 0 757 0 0 0 0 0 4 761 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Eyre;t__ 0 0 0 0 0 0 0 898 898 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 18;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Royal Farm virus;t__Karshi virus 0 0 0 0 0 0 0 213 213 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Fishburnevirus;s__Mycobacterium virus Malithi;t__Mycobacterium phage Malithi 0 0 0 0 242 391 0 304 937 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Changping Tick Virus 2;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Pelarspovirus;s__Pelargonium line pattern virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 1;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Charlievirus;s__Mycobacterium virus Charlie;t__Mycobacterium phage Charlie 0 0 0 0 12 0 0 848 860 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circo-like virus-Brazil;t__Circo-like virus-Brazil hs1 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Ourmiavirus;s__Ourmia melon virus;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Maize yellow mosaic virus;t__Maize yellow dwarf virus-RMV2 0 0 0 0 0 0 0 112 112 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Panicovirus;s__Thin paspalum asymptomatic virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-24;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Culex tritaeniorhynchus rhabdovirus;t__ 0 0 0 0 0 0 0 223 223 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Wile;t__ 0 0 0 0 16 11 0 999 1026 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Stenotrophomonas phage S1;t__ 0 0 0 0 0 0 0 805 805 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pantoea virus Limezero;t__Pantoea phage LIMEzero 0 0 0 0 0 0 0 860 860 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Barriga;t__ 0 0 0 0 148 525 0 379 1052 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__;s__Blackberry virus E;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Jolie2;t__ 0 0 0 0 0 0 0 886 886 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai Nido-like virus 1;t__ 0 0 0 0 0 0 0 405 405 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__D3112virus;s__Pseudomonas phage PA1phi;t__ 0 0 0 0 303 126 0 262 691 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Avibirnavirus;s__Infectious bursal disease virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Rhopapillomavirus;s__Rhopapillomavirus 1;t__Trichechus manatus papillomavirus 1 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Vivi2;t__ 0 0 0 0 0 0 0 1186 1186 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mungbean yellow mosaic India virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra yellow mosaic Mexico virus;t__ 0 0 0 0 0 1 0 101 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Luchador;t__ 0 0 0 0 0 1 0 1066 1067 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cucurbit leaf crumple virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Passerivirus;s__Passerivirus A;t__Passerivirus A1 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Magnaporthe oryzae virus 1;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 77;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Wizard;t__ 0 0 0 0 0 1 0 1165 1166 k__Viruses;p__unclassified bacterial viruses;c__Stenotrophomonas phage phiSMA9;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 54;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Pukovnik;t__ 0 0 0 0 0 0 0 1057 1057 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton yellow mosaic virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL041M10;t__Propionibacterium phage PHL041M10 0 0 0 0 8 77 0 503 588 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Bxz2;t__ 0 0 0 0 0 1 0 1017 1018 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Barley yellow dwarf virus-PAS;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou nematode virus 3;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Apizium;t__Mycobacterium phage Apizium 0 0 0 0 19 934 0 411 1364 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 19;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Phomopsis vexans RNA virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 2;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 4;t__ 0 0 0 0 0 0 0 111 111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Kratio;t__ 0 0 0 0 159 0 0 1095 1254 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Turncurtovirus;s__Turnip leaf roll virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__Cripavirus;s__Anopheles C virus;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Ophioviridae;g__Ophiovirus;s__Blueberry mosaic associated virus;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 3;t__ 0 0 0 0 0 1 0 73 74 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Procrass1;t__Propionibacterium phage Procrass1 0 0 0 0 10 91 0 485 586 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Finch circovirus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash yellow mild mottle virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage LadyBird;t__ 0 0 0 0 4 223 0 835 1062 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Cuba virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Porcine bocavirus 5;t__Porcine bocavirus 5/JS677 0 0 0 0 0 2 0 99 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 6;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Alphapleolipovirus;s__Halorubrum virus HRPV-6;t__Halorubrum pleomorphic virus 6 0 0 0 0 0 20 0 150 170 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Farfantepenaeus duorarum pink shrimp associated circular virus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Alphapleolipovirus;s__Halorubrum virus HRPV-1;t__Halorubrum pleomorphic virus 1 0 0 0 0 0 0 0 140 140 k__Viruses;p__Virus families not assigned to an order;c__Sphaerolipoviridae;o__;f__;g__Alphasphaerolipovirus;s__Haloarcula hispanica icosahedral virus 2;t__ 0 0 0 0 0 0 0 611 611 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__Kibale red colobus virus 1;t__ 0 0 0 0 0 0 0 308 308 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Chadwick;t__ 0 0 0 0 0 31 0 957 988 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phic31virus;s__Streptomyces phage phiBT1;t__ 0 0 0 0 0 0 0 836 836 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Penicillium aurantiogriseum totivirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage CASbig;t__ 0 0 0 0 1 0 0 1066 1067 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage SV1;t__ 0 0 0 0 0 0 0 752 752 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow vein Vietnam virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage HufflyPuff;t__ 0 0 0 0 1157 217 0 152 1526 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sugarcane streak virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Soto;t__Mycobacterium phage Phipps 0 0 0 0 0 0 0 1365 1365 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae GAIR4;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Pelargonium leaf curl virus;t__ 0 0 0 0 0 2 0 93 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Artichoke mottled crinkle virus;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus J;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsRNA viruses;c__Amalgaviridae;o__;f__;g__;s__Blueberry latent virus;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Pg1;t__Mycobacterium phage Kikipoo 0 0 0 0 9 1065 196 106 1376 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Cucumber green mottle mosaic virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 6;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Ralstonia phage RSA1;t__ 0 0 0 0 0 0 0 775 775 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__;s__Pseudomonas phage PRR1;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 15;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 7;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__Bxz1virus;s__Mycobacterium virus Bxz1;t__Mycobacterium phage ArcherS7 0 0 0 0 128 53 2727 223 3131 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Tobacco mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Kp32virus;s__Klebsiella virus K11;t__Klebsiella phage K11 0 0 0 0 0 25 0 798 823 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Closteroviridae;g__Closterovirus;s__Strawberry chlorotic fleck-associated virus;t__ 0 0 0 0 0 0 0 340 340 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Salmonella phage Vi06;t__ 0 0 0 0 0 1 0 766 767 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 9 LDMD-2013;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Gemycircularvirus gemy-ch-rat1;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage REQ2;t__ 0 0 0 0 0 0 0 986 986 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Bromus-associated circular DNA virus 2;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage phiHau3;t__ 0 0 0 0 0 0 0 1005 1005 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage MPK6;t__ 0 0 0 0 0 72 0 787 859 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus B;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum leaf curl betasatellite;t__ 0 0 0 0 0 1 13 13 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida angular mosaic virus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Equemioh13;t__ 0 0 0 0 7 30 0 1023 1060 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage PHL010M04;t__ 0 0 0 0 3 1 0 586 590 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Sarfire;t__ 0 0 0 0 170 335 0 569 1074 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Chalara elegans RNA Virus 1;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified viruses;c__Halovirus VNH-1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Chicken associated smacovirus;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Picornavirales Bu-3;t__ 0 0 0 0 0 0 0 196 196 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-20;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Penstyldensovirus;s__Decapod penstyldensovirus 1;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__;s__Ixeridium yellow mottle virus 1;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__;s__Atlantic salmon swim bladder sarcoma virus;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orbivirus;s__Great Island virus;t__ 0 0 0 0 0 0 0 339 339 k__BacteriaPlasmid;p__Bacteroidetes;c__;o__Bacteroidetes Order II. Incertae sedis;f__Rhodothermaceae;g__Salinibacter;s__Salinibacter ruber;t__Salinibacter ruber DSM 13855 0 0 0 0 0 0 0 710 710 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Spodoptera exigua iflavirus 2;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 9;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae Fen7875_21;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 44;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe isopoda virus 2;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Citrobacter phage SH3;t__ 0 0 0 0 10 40 0 738 788 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic yellows C11 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Sclerotinia nivalis victorivirus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 93;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Squash mosaic virus;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Gordonia phage GTE6;t__ 0 0 0 0 0 0 0 1139 1139 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Phelemich;t__ 0 0 0 0 0 0 0 1402 1402 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Mouse cyclovirus;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia picorna-like virus 13;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Fur seal faeces associated circular DNA virus;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Beet mosaic virus;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changping earthworm virus 1;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Phayoncevirus;s__Mycobacterium virus Phayonce;t__Mycobacterium phage Phayonce 0 0 0 0 23 0 0 961 984 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Turnip rosette virus;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Wissadula yellow mosaic virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Bengal virus;t__ 0 0 0 0 0 3 0 53 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Scrophularia mottle virus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Dicliptera yellow mottle virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Canary virus;t__ 0 0 0 0 0 10 0 46 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Datura leaf distortion virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 9;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DHCV-6;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae Bog8989_22;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Amdoparvovirus;s__Raccoon dog amdovirus;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__;s__Clematis chlorotic mottle virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Guar leaf curl alphasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Hedyotis yellow mosaic betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Nanovirus;s__Pea necrotic yellow dwarf virus;t__ 0 0 0 0 0 0 0 144 144 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 8;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Cyclovirus PKgoat21/PAK/2009;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Bouboui virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Avian orthoreovirus;t__ 0 0 0 0 0 0 0 452 452 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Blueberry shock virus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__;s__Espirito Santo virus;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome RW-E;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Chimpanzee smacovirus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Gammacarmovirus;s__Pea stem necrosis virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 25;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sida yellow vein Vietnam alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Lettuce necrotic yellows cytorhabdovirus;t__Lettuce necrotic yellows virus 0 0 0 0 0 0 0 256 256 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf crumple virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Trifolium-associated circular DNA virus 1;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-9;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__unclassified RNA viruses;c__Adelphocoris suturalis virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 216 216 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Ophiostoma mitovirus 4;t__ 0 0 0 0 0 0 0 51 51 k__BacteriaPlasmid;p__Cyanobacteria;c__;o__Oscillatoriales;f__Oscillatoriaceae;g__Moorea;s__Moorea producens;t__Moorea producens JHB 0 0 0 0 0 0 0 226 226 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Nilaparvata lugens honeydew virus-2;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Nilaparvata lugens honeydew virus-3;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai hepe-like virus 4;t__ 0 0 0 0 0 0 0 252 252 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Tremovirus;s__Tremovirus A;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Ustilago maydis virus H1;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Pea enation mosaic virus-2;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe tombus-like virus 2;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei unio douglasiae virus 2;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__dsRNA viruses;c__Cystoviridae;o__;f__;g__Cystovirus;s__Pseudomonas phage phi6;t__ 0 0 0 0 0 0 0 263 263 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Grapevine fanleaf virus;t__ 0 0 0 0 0 0 0 220 220 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tobacco leaf chlorosis betasatellite;t__ 0 0 0 0 0 3 0 23 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Piro94;t__ 0 0 0 0 6 337 0 709 1052 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__Hepatitis C virus genotype 5 0 0 0 0 0 0 1 185 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Ateles paniscus polyomavirus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Tetraselmis viridis virus S20;t__ 0 0 0 0 0 0 0 779 779 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Bovine astrovirus B170/HK;t__ 0 0 0 0 0 7 0 119 126 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 8;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__unclassified viruses;c__Alternaria brassicicola fusarivirus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Solenopsis invicta virus 2;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__;s__Nectarine virus M;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Vernonia yellow vein virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Theia;t__ 0 0 0 0 0 361 0 658 1019 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl China virus - OX2;t__ 0 0 0 0 0 5 0 49 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Zeavirus;s__Maize necrotic streak virus;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Tin2virus;s__Tsukamurella virus TIN2;t__Tsukamurella phage TIN2 0 0 0 0 0 0 0 1539 1539 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Alternanthera yellow vein betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Dolichos yellow mosaic virus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus GyV7-SF;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Simian virus 12;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Posavirus 2;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Dreamboat;t__ 0 0 0 0 636 223 0 162 1021 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Alvin;t__ 0 0 0 0 156 282 0 553 991 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA phages;o__;f__;g__;s__Halorubrum phage CGphi46;t__ 0 0 0 0 0 0 0 795 795 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Rubivirus;s__Rubella virus;t__ 0 0 0 0 0 0 0 195 195 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium chocolatum;t__ 0 0 0 0 0 0 0 956 1010 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Switchgrass mosaic virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Gordonia phage GTE8;t__ 0 0 0 0 0 0 0 1352 1352 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Twister6;t__ 0 0 0 0 0 372 0 784 1156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Cjw1virus;s__Mycobacterium phage Dusk;t__ 0 0 0 0 160 1223 0 123 1506 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__La Jolla virus;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Mayotte virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 111;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Apple geminivirus PL-2015;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Guangxi virus;t__ 0 0 0 0 0 12 0 44 56 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 7;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Peanut mottle virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Avihepadnavirus;s__Parrot hepatitis B virus;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum leaf curl virus;t__Ageratum leaf curl virus - [G52] 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Rosellinia necatrix fusarivirus 1;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Reptarenavirus;s__Alethinophid 2 reptarenavirus;t__University of Helsinki virus 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 4 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sesarmid crab virus 2;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Simian torque teno virus 33;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Tobacco virus 2;t__ 0 0 0 0 0 49 0 70 119 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Leishmaniavirus;s__Leishmania RNA virus 1;t__Leishmania RNA virus 1 - 1 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 56;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Microtus arvalis polyomavirus 1;t__Common vole polyomavirus 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 46;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Hop trefoil cryptic virus 2;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Mint virus X;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow vein Madurai virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Watermelon chlorotic stunt virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Capillovirus;s__Cherry virus A;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Yeezy;t__ 0 0 0 0 0 84 0 953 1037 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Northern cereal mosaic cytorhabdovirus;t__Northern cereal mosaic virus 0 0 0 0 0 0 0 264 264 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Apple stem pitting virus;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Solanum nodiflorum mottle virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Habenivirus;s__Ralstonia virus RS603;t__Ralstonia phage RS603 0 0 0 0 2 24 0 127 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 19;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 14;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Che9cvirus;s__Mycobacterium phage Che9c;t__ 0 0 0 0 0 0 0 1140 1140 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Gsput1;t__ 0 0 0 0 0 0 0 870 870 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__unidentified circular ssDNA virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Carnation mottle virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao sobemo-like virus 1;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Modoc virus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Bhendi yellow vein mosaic betasatellite;t__Bhendi yellow vein mosaic betasatellite [India:Coimbator:OYCO1:2005] 0 0 0 0 0 0 0 27 27 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Labrenzia;s__Labrenzia alexandrii;t__Labrenzia alexandrii DFL-11 0 0 0 0 0 0 0 18 834 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Propionibacterium phage BruceLethal;t__ 0 0 0 0 19 6 0 559 584 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou gastropodes virus 1;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Ralstonia phage RSB1;t__ 0 0 0 0 0 0 0 861 861 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou toti-like virus 1;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Barley virus G;t__ 0 0 0 0 0 0 0 112 112 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Halovirus HHTV-2;t__ 0 0 0 0 0 0 0 1052 1052 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Petunia chlorotic mottle virus;t__ 0 0 0 0 0 0 0 226 226 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 119;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Red clover cryptic virus 2;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Chimpanzee polyomavirus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Saboya virus;t__ 0 0 0 0 0 0 0 203 203 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Mosavirus;s__Mosavirus A;t__Mosavirus A2 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mosaic Florida virus;t__Sida golden mosaic Florida virus-Malvastrum 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Pseudomonas phage PT2;t__ 0 0 0 0 662 0 0 197 859 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 5;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Magnaporthe oryzae chrysovirus 1;t__ 0 0 0 0 0 0 0 253 253 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Chloris striate mosaic virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae LDMD-2013a;t__Circoviridae 5 LDMD-2013 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Helminthosporium victoriae 145S virus;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Papaya leaf crumple virus;t__Papaya leaf crumple virus-Panipat 8 [India:Panipat:Papaya:2008] 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Alpha3microvirus;s__Escherichia virus St1;t__Enterobacteria phage St-1 0 0 0 0 0 3 0 118 121 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 6;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Bat associated circovirus 4;t__Tadarida brasiliensis circovirus 1 0 0 0 0 0 0 0 35 35 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus SKKY;t__Propionibacterium phage SKKY 0 0 0 0 6 89 0 496 591 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Yersinia phage Berlin;t__ 0 0 0 0 0 7 0 764 771 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Bat crohivirus;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 15;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__dsRNA viruses;c__Picobirnaviridae;o__;f__;g__Picobirnavirus;s__Human picobirnavirus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium mosaic Puerto Rico virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei orthoptera virus 1;t__ 0 0 0 0 0 0 0 191 191 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp. IHBB 11108;t__ 0 0 0 0 0 0 0 4 74 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Liefievirus;s__Mycobacterium phage Halo;t__ 0 0 0 0 7 0 0 838 845 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Magnaporthe oryzae virus 2;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 7;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 1;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Primnoa pacifica coral associated circular virus;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae IME-16;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Centovirus;t__Mosquito dicistrovirus 0 0 0 0 0 0 0 180 180 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 26;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum conyzoides associated symptomless alphasatellite;t__ 0 0 0 0 0 2 0 26 28 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum enation virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein virus;t__ 0 0 0 0 0 3 0 51 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Cardioderma polyomavirus;t__ 0 0 0 0 0 0 0 107 107 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium aceticum;t__ 0 0 0 0 0 0 0 85 114 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Guereza hepacivirus;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bastrovirus/VietNam/Porcine/17489_85;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Soybean yellow common mosaic virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Vietnam virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Curtovirus;s__Horseradish curly top virus;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Nyamiviridae;g__Nyavirus;s__Midway nyavirus;t__ 0 0 0 0 0 0 0 235 235 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Grapevine Algerian latent virus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 10;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Rose cryptic virus 1;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Ligustrum necrotic ringspot virus;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Phocoena phocoena papillomavirus 2;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Nemesia ring necrosis virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__;s__Dioscorea mosaic-associated virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Malvastrum yellow mosaic Cameroon alphasatellite;t__ 0 0 0 0 0 0 0 28 28 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 49;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Cucumovirus;s__Peanut stunt virus;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__African eggplant yellowing virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Squirrel associated cyclovirus 1;t__Cyclovirus TsCyV-1_JP-NUBS-2014 0 0 0 0 0 0 0 35 35 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Ross's goose hepatitis B virus;t__Snow goose hepatitis B virus 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Habenivirus;s__Ralstonia virus RSM1;t__Ralstonia phage RSM1 0 0 0 0 0 70 0 110 180 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 54;t__ 0 0 0 0 0 0 0 200 200 k__Viruses;p__unclassified viruses;c__Beauveria bassiana polymycovirus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Orthoreovirus;s__Pteropine orthoreovirus;t__Cangyuan orthoreovirus 0 0 0 0 0 0 10 439 449 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 21;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Lytechinus variegatus variable sea urchin associated circular virus;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cleome leaf crumple virus associated DNA 1;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Gandhinagar betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-4;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Temperate fruit decay-associated virus;t__ 0 0 0 0 0 0 0 68 68 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Potato spindle tuber viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Tomato chlorotic dwarf viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato yellow dwarf disease associated satellite DNA beta-[Kochi];t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Bangalore virus-[Ban5] satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Avian carcinoma virus;t__ 0 0 0 0 0 1 0 51 52 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-25;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Papaya leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Kenaf leaf curl betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen418_41;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Soymovirus;s__Peanut chlorotic streak virus;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__dsDNA viruses, no RNA stage;c__unclassified dsDNA viruses;o__;f__;g__;s__Pyrococcus abyssi virus 1;t__ 0 0 0 0 0 0 0 361 361 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Togaviridae;g__Alphavirus;s__Fort Morgan virus;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Mesocricetus auratus polyomavirus 1;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus goat/JL14;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Cucumovirus;s__Tomato aspermy virus;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Chilli leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Arracacha virus V;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Pipapillomavirus;s__Pipapillomavirus 2;t__Micromys minutus papillomavirus 1 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Cytorhabdovirus;s__Wuhan Insect virus 6;t__ 0 0 0 0 0 0 0 283 283 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Hop mosaic virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Heartland virus;t__ 0 0 0 0 0 0 0 227 227 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Milk vetch dwarf C1 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Ilarvirus;s__Lilac leaf chlorosis virus;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Turnip yellows virus;t__ 0 0 0 0 0 0 0 112 112 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobravirus;s__Tobacco rattle virus;t__ 0 0 0 0 0 0 0 211 211 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage DL54;t__ 0 0 0 0 11 0 0 902 913 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai permutotetra-like virus 2;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Velvet bean severe mosaic virus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Hop latent virus;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 26;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Bat picornavirus 2;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Eggplant mottled crinkle virus;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bastrovirus/VietNam/Rat/16715_58;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Pelargonium vein banding virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Pelarspovirus;s__Rosa rugosa leaf distortion virus;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pavonia yellow mosaic virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Baee;t__ 0 0 0 0 0 0 0 1405 1405 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 15;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Pipapillomavirus;s__Pipapillomavirus 2;t__Mus musculus papillomavirus type 1 0 0 0 0 0 0 0 150 150 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Waikavirus;s__Rice tungro spherical virus;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 4 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ramie mosaic Yunnan virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__;s__Keunjorong mosaic virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Enamovirus;s__Alfalfa enamovirus 1;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Telosma mosaic virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 47;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Pepo aphid-borne yellows virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Mesta yellow vein mosaic virus-associated alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Bovine astrovirus B76/HK;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betanecrovirus;s__Tobacco necrosis virus D;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 2 LDMD-2013;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 14;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Rosalind;t__ 0 0 0 0 316 554 0 183 1053 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Panax notoginseng virus A;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 41;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__;g__;s__Wuhan Tick Virus 1;t__ 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__Porcine epidemic diarrhea virus;t__ 0 0 0 0 0 0 0 560 560 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betacarmovirus;s__Hibiscus chlorotic ringspot virus;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 7;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 21 21 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 18;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Lucerne transient streak virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai paphia shell virus 3;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium common mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Pseudomonas phage Pf3;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sida yellow vein China alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DHCV-1;t__ 0 0 0 0 0 0 0 23 23 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Gallantivirus;s__Galinsoga mosaic virus;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Torradovirus;s__Tomato marchitez virus;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Phlox virus S;t__ 0 0 0 0 0 0 0 171 171 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 1;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Cowpea mosaic virus;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 20;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper golden mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Cucumber fruit mottle mosaic virus;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Vernonia crinkle betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Mesocricetus auratus papillomavirus 1;t__ 0 0 0 0 0 0 0 152 152 k__Viruses;p__Retro-transcribing viruses;c__Caulimoviridae;o__;f__;g__Badnavirus;s__Piper yellow mottle virus;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 69;t__ 0 0 0 0 0 0 0 168 168 k__Viroids;p__;c__;o__;f__;g__;s__Grapevine latent viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Kyasanur forest disease virus;t__Alkhumra hemorrhagic fever virus 0 0 0 0 0 0 0 213 213 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Grapevine asteroid mosaic-associated virus;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Doom;t__ 0 0 0 0 319 273 0 436 1028 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage PPpW-4;t__ 0 0 0 0 0 0 0 827 827 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Mus musculus polyomavirus 1;t__Murine polyomavirus strain BG 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 8;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 14;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Euphorbia leaf curl virus;t__ 0 0 0 0 0 2 0 52 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Guangxi virus;t__ 0 0 0 0 0 7 0 48 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper leaf curl Lahore virus;t__Pepper leaf curl Lahore Virus-[Pakistan:Lahore1:2004] 0 0 0 0 0 1 0 53 54 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Woolly monkey hepatitis B Virus;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 12;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus sp.;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Wheeler;t__ 0 0 0 0 194 257 0 620 1071 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage Bf7;t__ 0 0 0 0 0 0 0 801 801 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Anseriform dependoparvovirus 1;t__Goose parvovirus 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Lockley;t__ 0 0 0 0 754 169 0 106 1029 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Ctenophore-associated circular virus 1;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein Changa Manga virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Hollyhock yellow vein mosaic virus;t__ 0 0 0 0 0 3 0 51 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 15;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Dill cryptic virus 2;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage Tiffany;t__ 0 0 0 0 0 843 0 172 1015 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 1;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Cooper;t__Mycobacterium phage Cooper 0 0 0 0 0 0 0 1413 1413 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Red clover powdery mildew-associated totivirus 9;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato common mosaic virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage HanShotFirst;t__ 0 0 0 0 0 152 0 895 1047 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium poae mitovirus 2;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__unclassified viruses;c__Penicillium aurantiogriseum partiti-like virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 22;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Digitaria didactyla striate mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyoiotapapillomavirus;s__Equine papillomavirus 2;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang narna-like virus 2;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai razor shell virus 3;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 10;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__Hypovirus;s__Cryphonectria hypovirus 1;t__ 0 0 0 0 0 0 0 254 254 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Biomphalaria virus 2;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai shrimp virus 2;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Torque teno virus;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 3;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 15;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__;s__Porcine partetravirus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Hepatitis B virus;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 16;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan large pig roundworm virus 1;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Prunevirus;s__Apricot vein clearing associated virus;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Yam virus X;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Mesorhizobium phage vB_MloP_Lo5R7ANS;t__ 0 0 0 0 0 0 0 914 914 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodobacter phage RC1;t__ 0 0 0 0 0 0 0 791 791 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Mongoose feces-associated gemycircularvirus a;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Bat adeno-associated virus YNM;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GMA4;t__ 0 0 0 0 0 0 0 910 910 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage BetterKatz;t__ 0 0 0 0 0 0 0 1012 1012 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__HMO Astrovirus A;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 20;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Yuavirus;s__Phage phiJL001;t__ 0 0 0 0 0 0 0 1272 1272 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Pegivirus E;t__Equine pegivirus 0 0 0 0 0 0 0 223 223 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Jatropha mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Alcaligenes;s__Alcaligenes faecalis;t__ 0 23 0 0 0 0 0 34 298 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Rodent hepacivirus;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Seal anellovirus 3;t__ 0 0 0 0 0 7 0 36 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 7;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Ryegrass mottle virus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Grapevine virus A;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Lyssavirus;s__Lyssavirus Ozernoe;t__ 0 0 0 0 0 0 0 239 239 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai octopus virus 2;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Oline;t__Mycobacterium phage Oline 0 0 0 0 3 671 0 700 1374 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Brome mosaic virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Enterobacteria phage T3;t__ 0 0 0 0 0 159 0 605 764 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Nyamiviridae;g__Nyavirus;s__Sierra Nevada nyavirus;t__Sierra Nevada virus 0 0 0 0 0 0 0 236 236 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 13;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Comovirus;s__Bean rugose mosaic virus;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium poae mitovirus 1;t__ 0 0 0 0 0 0 0 47 47 k__BacteriaPlasmid;p__Firmicutes;c__Clostridia;o__Clostridiales;f__;g__Gottschalkia;s__Gottschalkia acidurici;t__[Clostridium] acidurici 9a 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Tuber aestivum mitovirus;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Hermit crab associated circular virus;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 8;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tick virus 3;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Mulberry mosaic dwarf associated virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 4;t__Papilio polyxenes densovirus 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Cozz;t__ 0 0 0 0 0 1 0 930 931 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Blainvillea yellow spot virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 7;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow vein streak virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 24;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 5;t__ 0 0 0 0 0 0 0 175 175 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Iteradensovirus;s__Lepidopteran iteradensovirus 2;t__Sibine fusca densovirus 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mottle virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 25;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__;s__Euscelidius variegatus virus 1;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Higrevirus;s__Hibiscus green spot virus;t__ 0 0 0 0 0 0 0 290 290 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Kyuri green mottle mosaic virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Salehabad phlebovirus;t__Adana virus 0 0 0 0 0 0 0 243 243 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Liwa virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 8;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Mouse kobuvirus M-5/USA/2010;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Phaius virus X;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Feline astrovirus 2;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Pea leaf distortion betasatellite;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus U2;t__Mycobacterium phage U2 0 0 0 0 290 101 0 634 1025 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Panicovirus;s__Panicum mosaic virus;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao insect virus 9;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Vitivirus;s__Grapevine virus E;t__ 0 0 0 0 0 0 0 151 151 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 17;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Simartevirus;s__Pebjah virus;t__ 0 0 0 0 0 0 0 309 309 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 46;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Carrot mottle mimic virus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Penicillium janczewskii chrysovirus 1;t__ 0 0 0 0 0 0 0 235 235 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Avisivirus Pf-CHK1/AsV;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Taupapillomavirus;s__Taupapillomavirus 3;t__Felis catus papillomavirus 3 0 0 0 0 0 0 0 151 151 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Melochia mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Genomoviridae;c__Gemykroznavirus;o__;f__;g__;s__Rabbit associated gemykroznavirus 1;t__Faeces associated gemycircularvirus 11 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 17;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Carrot red leaf luteovirus associated RNA;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 7;t__ 0 0 0 0 0 0 0 165 165 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Gremmeniella abietina RNA virus L2;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Pseudogymnoascus destructans partitivirus-pa;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Corndogvirus;s__Mycobacterium phage Corndog;t__ 0 0 0 0 5 0 0 1390 1395 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Moroccan watermelon mosaic virus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Bane1;t__Mycobacterium phage Bane1 0 0 0 0 0 14 0 1372 1386 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Coronaviridae;g__Alphacoronavirus;s__BtNv-AlphaCoV/SC2013;t__ 0 0 0 0 0 0 0 555 555 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 57;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mosaic Costa Rica virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Biomphalaria virus 3;t__ 0 0 0 0 0 0 0 199 199 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang zhaovirus-like virus 1;t__ 0 0 0 0 0 0 0 136 136 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai noda-like virus 11;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Manad;t__Mycobacterium phage Manad 0 0 0 0 13 1148 0 215 1376 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 8;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphanecrovirus;s__Tobacco necrosis virus A;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-2;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 22;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Rhodococcus phage E3;t__ 0 0 0 0 0 0 0 2851 2851 k__Viruses;p__unclassified viruses;c__Black grass varicosavirus-like virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Pegivirus A;t__Simian pegivirus 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 9;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Potato yellow mosaic Panama virus;t__ 0 0 0 0 0 1 0 99 100 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Potato yellow mosaic virus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 13;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Gerygone associated gemycircularvirus 3;t__Faeces associated gemycircularvirus 3 0 0 0 0 0 0 0 43 43 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyoepsilonpapillomavirus;s__Dyoepsilonpapillomavirus 1;t__Francolinus leucoscepus papillomavirus 1 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 115;t__ 0 0 0 0 0 0 0 209 209 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Mulciber;t__ 0 0 0 0 11 4 0 1033 1048 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 11;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Synechococcus phage S-CBS3;t__ 0 0 0 0 0 0 0 660 660 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 16;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Thailand virus;t__ 0 0 0 0 0 6 0 49 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__African cassava mosaic virus;t__ 0 0 0 0 0 1 0 107 108 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Comoros virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 11;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Mamastrovirus 13;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Vesivirus;s__Canine calicivirus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pg1virus;s__Mycobacterium virus Soto;t__Mycobacterium phage Soto 0 0 0 0 0 373 630 351 1354 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Camponotus nipponicus virus;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage ArcherNM;t__ 0 0 0 0 1 18 0 1032 1051 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Aeneas;t__ 0 0 0 0 194 319 0 560 1073 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Phikmvvirus;s__Pseudomonas phage vB_Pae-TbilisiM32;t__ 0 0 0 0 47 653 0 159 859 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 84;t__ 0 0 0 0 0 0 0 162 162 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 4;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 4;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai noda-like virus 5;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Violet;t__Mycobacterium phage Violet 0 0 0 0 414 211 0 424 1049 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Velvet tobacco mottle virus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Loser;t__ 0 0 0 0 0 193 0 876 1069 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Wenling shark virus;t__ 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 123;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 20;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Chaerephon polyomavirus 1;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 5;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PAS50;t__Propionibacterium phage PAS50 0 0 0 0 0 109 0 471 580 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Alternaria alternata virus 1;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Lepidopteran ambidensovirus 1;t__Junonia coenia densovirus 0 0 0 0 0 0 0 119 119 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage BTCU-1;t__ 0 0 0 0 0 0 0 918 918 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Tembusu virus;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__dsRNA viruses;c__Hypoviridae;o__;f__;g__;s__Beihai sipunculid worm virus 6;t__ 0 0 0 0 0 0 0 178 178 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 33;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 12;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Chicory yellow mottle virus large satellite RNA;t__ 0 0 0 0 0 0 0 23 23 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Potato virus H;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai razor shell virus 2;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai octopus virus 1;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sea turtle tornovirus 1;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Dragonfly associated gemycircularvirus 1;t__Dragonfly-associated circular virus 2 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GRU3;t__ 0 0 0 0 0 2 0 352 354 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__KI polyomavirus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-42;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Tolypocladium cylindrosporum virus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Ralstonia phage RSB2;t__ 0 0 0 0 0 0 0 808 808 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Pinto;t__ 0 0 0 0 0 0 0 1012 1012 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Palampur virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao insect virus 10;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 20;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 60;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou sobemo-like virus 4;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 16;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__;s__Trailing lespedeza virus 1;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Larenn;t__ 0 0 0 0 9 13 0 1037 1059 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage R4;t__ 0 0 0 0 0 0 0 1021 1021 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 3;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Trichomonas vaginalis virus;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Mus musculus mobilized endogenous polytropic provirus;t__ 0 0 0 0 0 15 0 148 163 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 21;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 17;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 2;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato leaf curl Yemen betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Rabbit astrovirus TN/2208/2010;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash leaf curl virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Gammacarmovirus;s__Cowpea mottle virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium yellow net virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 8;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Paramyxoviridae;g__Rubulavirus;s__Tuhoko rubulavirus 1;t__Tuhoko virus 1 0 0 0 0 0 0 0 317 317 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai blue swimmer crab virus 3;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Treisepsilonpapillomavirus;s__Treisepsilonpapillomavirus 1;t__Pygoscelis adeliae papillomavirus 1 0 0 0 0 0 0 0 152 152 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 8;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus BrownCNA;t__Mycobacterium phage BrownCNA 0 0 0 0 0 201 0 1223 1424 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Circulifer tenellus virus 1;t__ 0 0 0 0 0 0 0 161 161 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Betanodavirus;s__Senegalese sole Iberian betanodavirus;t__ 0 0 0 0 0 7 0 81 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Rose spring dwarf-associated virus;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Severus;t__ 0 0 0 0 0 0 0 997 997 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 108;t__ 0 0 0 0 0 0 0 276 276 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou sobemo-like virus 3;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tobacco bushy top virus satellite-like RNA;t__ 0 0 0 0 0 0 0 15 15 k__Viruses;p__dsRNA viruses;c__Picobirnaviridae;o__;f__;g__Picobirnavirus;s__Porcine picobirnavirus;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Chaoyang virus;t__ 0 0 0 0 0 0 0 214 214 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 2;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__unclassified ssRNA viruses;o__;f__Fusariviridae;g__;s__Penicillium roqueforti ssRNA mycovirus 1;t__ 0 0 0 0 0 0 0 120 120 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Potato yellow mosaic Trinidad virus;t__ 0 0 0 0 0 2 0 98 100 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Rhizoctonia solani virus 717;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Zucchini green mottle mosaic virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 11;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Potato apical leaf curl disease-associated satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 13 LDMD-2013;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified viruses;c__Marine RNA virus PAL156;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 157 157 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Lagovirus;s__Rabbit calicivirus Australia 1 MIC-07;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 4;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 3;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__French bean severe leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 12;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-2;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Java virus;t__ 0 0 0 0 0 2 0 53 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Feline picornavirus;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein Hualian virus;t__ 0 0 0 0 0 6 0 49 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Shuangbai virus - [Y4536];t__ 0 0 0 0 0 4 0 50 54 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Chimpanzee faeces associated microphage 1;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage GMA5;t__ 0 0 0 0 0 0 0 351 351 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Bactobuster;t__ 0 0 0 0 86 8 0 948 1042 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 9;t__ 0 0 0 0 0 0 0 186 186 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Bangalore virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Taiwan virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-9;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 61;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Artemisia virus A;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Adelie penguin polyomavirus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Zaka;t__ 0 0 0 0 0 472 384 186 1042 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 16;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Erythroparvovirus;s__Primate erythroparvovirus 1;t__Human parvovirus B19 0 0 0 0 0 0 0 111 111 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__;s__Mycobacterium phage Myrna;t__ 0 0 0 0 0 0 0 3292 3292 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 31;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified viruses;c__Chimpanzee faeces associated circular DNA molecule 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Gemycircularvirus HV-GcV1;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Cilevirus;s__Citrus leprosis virus C;t__ 0 0 0 0 0 0 0 271 271 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Bhendi yellow vein mosaic virus-associated alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__Satellites;c__Satellite Viruses;o__;f__;g__;s__Cassava satellite virus;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 2;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Trichechus manatus papillomavirus 4;t__ 0 0 0 0 0 0 0 155 155 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Sapporo virus;t__Sapovirus GII 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei mosquito virus 3;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Swirley;t__ 0 0 0 0 0 588 0 406 994 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sri Lankan cassava mosaic virus;t__Sri Lankan cassava mosaic virus-[Colombo] 0 0 0 0 0 5 0 102 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 23;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 1;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-18;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Chlamydiamicrovirus;s__Chlamydia virus CPAR39;t__ 0 0 0 0 0 15 0 75 90 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl China virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Anagyris vein yellowing virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 14 LDMD-2013;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Equine hepacivirus;t__Equine hepacivirus JPN3/JAPAN/2013 0 0 0 0 0 0 0 187 187 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Poaceae associated gemycircularvirus 1;t__Poaceae-associated gemycircularvirus 1 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Foveavirus;s__Peach chlorotic mottle virus;t__ 0 0 0 0 0 0 0 180 180 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Pan troglodytes verus polyomavirus 3;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 9;t__ 0 0 0 0 0 0 0 221 221 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei myriapoda virus 9;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 9;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 8;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash leaf curl Philippines virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Zhejiang mosquito virus 3;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Lama associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 21 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Sokoluk virus;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__dsRNA viruses;c__Chrysoviridae;o__;f__;g__Chrysovirus;s__Penicillium chrysogenum virus;t__ 0 0 0 0 0 0 0 247 247 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Aconitum latent virus;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Zebra finch circovirus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Passionfruit severe leaf distortion virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL141N00;t__Propionibacterium phage PHL141N00 0 0 0 0 13 112 0 464 589 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Senecavirus;s__Senecavirus A;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 9;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Avian myelocytomatosis virus;t__ 0 0 0 0 0 7 0 60 67 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai uca arcuata virus 1;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__African elephant polyomavirus 1;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Moroccan pepper virus;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Tomato bushy stunt virus;t__ 0 0 0 0 0 1 0 94 95 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage phiSAJS1;t__ 0 0 0 0 0 0 0 1128 1128 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Gerygone associated gemycircularvirus 2;t__Faeces associated gemycircularvirus 5 0 0 0 0 0 0 0 43 43 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Horseshoe bat hepatitis B virus;t__ 0 0 0 0 0 0 0 67 67 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Roundleaf bat hepatitis B virus;t__ 0 0 0 0 0 0 0 67 67 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Blackbird associated gemykibivirus 1;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Clitocybe odora virus;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang astro-like virus;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Megrivirus;s__Turkey megrivirus;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Norwalk virus;t__Norovirus GV 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Cucumber mottle virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Lepidopteran ambidensovirus 1;t__Galleria mellonella densovirus 0 0 0 0 0 0 0 120 120 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Corynebacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium abscessus;t__ 0 0 0 0 0 0 0 463 466 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 1 0 0 0 0 0 0 14 80 94 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus A;t__Adeno-associated virus - 2 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage L5;t__ 0 0 0 0 0 0 0 1045 1045 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Nienokoue virus;t__ 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cronartium ribicola mitovirus 1;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Tomato necrotic stunt virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 10;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Gull circovirus;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Quang Binh virus;t__Mosquito flavivirus 0 0 0 0 0 0 0 217 217 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Potyviridae;g__Potyvirus;s__Asparagus virus 1;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Lambdavirus;s__Streptomyces phage VWB;t__ 0 0 0 0 0 0 0 984 984 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 38;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__Satellites;c__Satellite Viruses;o__;f__;g__;s__Grapevine satellite virus;t__ 0 0 0 0 0 0 0 21 21 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 13;t__ 0 0 0 0 0 0 0 189 189 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Elderberry carlavirus D;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 4;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Discula destructiva virus 2;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picobirna-like virus 7;t__ 0 0 0 0 0 0 0 70 70 k__BacteriaPlasmid;p__Thermotogae;c__Thermotogae;o__Kosmotogales;f__Kosmotogaceae;g__Mesotoga;s__Mesotoga prima;t__Mesotoga prima MesG1.Ag.4.2 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 2;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cotton leaf curl Burewala betasatellite;t__ 0 0 0 0 0 3 0 24 27 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-30;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 17;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra mottle virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 16;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Nebovirus;s__Newbury-1 virus;t__Newbury agent 1 0 0 0 0 0 0 0 149 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 28;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 3;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 16;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Gammapapillomavirus;s__Gammapapillomavirus 8;t__Human papillomavirus type 112 0 0 0 0 0 0 0 144 144 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Zetapapillomavirus;s__Zetapapillomavirus 1;t__Equus caballus papillomavirus 1 0 0 0 0 0 0 0 152 152 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai partiti-like virus 2;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Mongoose feces-associated gemycircularvirus c;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Gompeii16;t__ 0 0 0 0 267 424 0 381 1072 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Iflaviridae;g__Iflavirus;s__Moku virus;t__ 0 0 0 0 0 0 0 201 201 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Anguilla anguilla circovirus;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-51;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-6;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__;s__Soybean cyst nematode virus 5;t__ 0 0 0 0 0 0 0 383 383 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium golden mosaic virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Anulavirus;s__Cassava Ivorian bacilliform virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Vernonia crinkle virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Andrographis yellow vein leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei virga-like virus 9;t__ 0 0 0 0 0 0 0 219 219 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Sclerotinia sclerotiorum mitovirus 3;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betanecrovirus;s__Leek white stripe virus;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai horseshoe crab virus 1;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage AnnaL29;t__ 0 0 0 0 1 3 0 1061 1065 k__Viruses;p__Virus families not assigned to an order;c__Sinaivirus;o__;f__;g__;s__Lake Sinai virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 20;t__ 0 0 0 0 0 0 0 143 143 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Tobamovirus;s__Clitoria yellow mottle virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 6;t__ 0 0 0 0 0 0 0 194 194 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Chicken picornavirus 4;t__ 0 0 0 0 0 0 0 191 191 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cereal yellow dwarf virus-RPS;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling toga-like virus;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Kenaf leaf curl virus;t__Kenaf leaf curl virus-[India:Bahraich:2007] 0 0 0 0 0 3 0 51 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__;s__Le Blanc nodavirus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 42;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Centrosema yellow spot virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper huasteco yellow vein virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Seychelles virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Multan virus;t__ 0 0 0 0 0 3 2 50 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Kerala virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Vinca leaf curl virus;t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Sewage derived gemykibivirus 2;t__Sewage-associated gemycircularvirus 2 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 5;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 29;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 9;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 10;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei leech virus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Crow polyomavirus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Attacne;t__Propionibacterium phage Attacne 0 0 0 0 14 72 0 491 577 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-26;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 6;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__;g__;s__Suffolk virus;t__ 0 0 0 0 0 0 0 215 215 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei arthropod virus 1;t__ 0 0 0 0 0 0 0 190 190 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 6;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cassava mosaic Madagascar virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Chilli leaf curl Ahmedabad virus-India [India/Ahmedabad/2014];t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus 4;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum yellow vein Chitwan betasatellite;t__ 0 0 0 0 0 2 0 24 26 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Indian encephalitis associated cyclovirus;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Senna leaf curl virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Honeysuckle yellow vein virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Tulip virus X;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Canary circovirus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Fusarium poae mycovirus 1;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage MOOREtheMARYer;t__ 0 0 0 0 0 0 0 889 889 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Botryotinia fuckeliana totivirus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 49;t__ 0 0 0 0 0 0 0 195 195 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 102;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-45;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-50;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cleome leaf crumple virus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sapelovirus;s__Bat sapelovirus;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Blattodean ambidensovirus 1;t__Periplaneta fuliginosa densovirus 0 0 0 0 0 0 0 109 109 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tomato yellow leaf curl China alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf deformation virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato begomovirus satellite DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Gammacarmovirus;s__Melon necrotic spot virus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato severe leaf curl virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mottle wrinkle virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 17;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sicinivirus;s__Chicken sicinivirus JSY;t__ 0 0 0 0 1 0 0 195 196 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 6;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Mus musculus polyomavirus 2;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mild yellow leaf curl Aragua virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow mosaic Alagoas virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mottle virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-11;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tomato leaf curl Cameroon alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Parechovirus;s__Sebokele virus 1;t__ 0 0 0 0 0 0 0 150 150 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 11;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Hibiscus leaf curl alphasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Bluegill hepadnavirus;t__ 0 0 0 0 0 0 0 65 65 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Betapolyomavirus;s__Pteronotus parnellii polyomavirus 1;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Ambidensovirus;s__Orthopteran ambidensovirus 1;t__Acheta domestica densovirus 0 0 0 0 0 0 0 104 104 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Cotton leaf curl Gezira betasatellite;t__ 0 0 0 0 0 2 0 24 26 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 8;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 23 23 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dromedary stool-associated circular ssDNA virus;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Pleurotus ostreatus virus 1;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Binucleate Rhizoctonia mitovirus K1;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Iotatorquevirus;s__Torque teno sus virus 1b;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 79;t__ 0 0 0 0 0 0 0 187 187 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Croton yellow vein mosaic virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium coeruleum mitovirus 1;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Betacarmovirus;s__Turnip crinkle virus;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash leaf curl China virus;t__Squash leaf curl China virus - [B] 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Henan virus;t__Sweet potato leaf curl Henan4 virus 0 0 0 0 0 1 0 54 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Henan virus;t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Aureusvirus;s__Cucumber leaf spot virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou bivalvia virus 3;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou qinvirus-like virus 2;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cronartium ribicola mitovirus 4;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Redrock;t__Mycobacterium phage RedRock 0 0 0 0 339 1 0 726 1066 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Bole tick virus 4;t__ 0 0 0 0 0 0 0 324 324 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Gandhinagar virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__Aquareovirus;s__Aquareovirus A;t__Chum salmon reovirus CS 0 0 0 0 0 0 0 440 440 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato golden vein associated virus;t__ 0 0 0 0 0 3 0 53 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Canary virus;t__ 0 0 0 0 0 4 0 52 56 k__BacteriaPlasmid;p__Proteobacteria;c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Arcobacter;s__Arcobacter sp. L;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-3;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__Genomoviridae;c__Gemykrogvirus;o__;f__;g__;s__Bovine associated gemykrogvirus 1;t__HCBI9.212 virus 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mosaic Sinaloa virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__dsRNA viruses;c__Reoviridae;o__;f__;g__;s__Callinectes sapidus reovirus 1;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Flavivirus;s__Cell fusing agent virus;t__ 0 0 0 0 0 0 0 213 213 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Chlamydiamicrovirus;s__Chlamydia phage 4;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei permutotetra-like virus 1;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__Genomoviridae;c__unclassified Genomoviridae;o__;f__;g__;s__Thrips-associated genomovirus 2;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Topocuvirus;s__Tomato pseudo-curly top virus;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mottle Taino virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Allolevivirus;s__Escherichia virus Qbeta;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 16;t__ 0 0 0 0 0 0 0 135 135 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Erectites yellow mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Cebu virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Milk vetch dwarf C2 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Passionfruit leaf distortion virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Becurtovirus;s__Spinach curly top Arizona virus;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Chili leaf curl Bhatinda betasatellite;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__unclassified viruses;c__Daeseongdong virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Indonesia virus;t__Tomato yellow leaf curl Indonesia virus-[Lembang] 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 34;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Bpp1virus;s__Bordetella virus BPP1;t__ 0 0 0 0 0 0 0 849 849 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra yellow crinkle virus;t__ 0 0 0 0 0 3 0 52 55 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Deltaretrovirus;s__Primate T-lymphotropic virus 2;t__Human T-lymphotropic virus 2 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Synedrella leaf curl virus;t__ 0 0 0 0 0 3 0 51 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Chilli leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper leaf curl Bangladesh virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Radish leaf curl virus;t__ 0 0 0 0 0 5 0 50 55 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Human papillomavirus type 154;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra leaf curl virus;t__ 0 0 0 0 0 7 0 40 47 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Kochi virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato golden mosaic virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Honeysuckle yellow vein Kagoshima virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai razor shell virus 1;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Ungulate bocaparvovirus 2;t__Porcine bocavirus 1 0 0 0 0 0 0 0 103 103 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Sumatran orang-utan polyomavirus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Malaysia virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein Cambodia virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 64;t__ 0 0 0 0 0 0 0 172 172 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Kumasi virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Multan virus;t__Gossypium darwinii symptomless virus 0 0 0 0 0 3 0 51 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sugarcane white streak virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 9;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Sclerodarnavirus;s__Sclerotinia sclerotiorum debilitation-associated RNA virus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Sudan virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Blechum interveinal chlorosis virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Allolevivirus;s__Escherichia virus FI;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Parabacteroides phage YZ-2015a;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Alphanodavirus;s__Nodamura virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Sesbania mosaic virus;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Acinetobacter phage AP205;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__dsRNA viruses;c__Amalgaviridae;o__;f__;g__;s__Rhododendron virus A;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou qinvirus-like virus 1;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__unclassified viruses;c__Duwamo virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cotton leafroll dwarf virus;t__ 0 0 0 0 0 0 0 117 117 k__Viruses;p__unclassified viruses;c__Marine RNA virus PAL473;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Gata virus;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__dsRNA viruses;c__Birnaviridae;o__;f__;g__Aquabirnavirus;s__Yellowtail ascites virus;t__ 0 0 0 0 0 0 0 112 112 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 28;t__ 0 0 0 0 0 0 0 132 132 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus C;t__Porcine kobuvirus 0 0 0 0 0 0 0 164 164 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 14;t__ 0 0 0 0 0 0 0 224 224 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato chlorotic leaf distortion virus;t__Tomato mottle leaf curl Zulia virus 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Bos taurus polyomavirus 1;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-10;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Spinach cryptic virus 1;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage KBG;t__ 0 0 0 0 273 171 0 627 1071 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou sobemo-like virus 1;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__White clover cryptic virus 2;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Carrot mottle virus satellite RNA;t__ 0 0 0 0 0 0 0 14 14 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Carrot mottle mimic virus satellite RNA;t__ 0 0 0 0 0 0 0 14 14 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Chlamydiamicrovirus;s__Chlamydia virus CPG1;t__Guinea pig Chlamydia phage 0 0 0 0 0 27 0 63 90 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Soybean chlorotic blotch virus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 15;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Jolie1;t__ 0 0 0 0 0 194 0 1227 1421 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Melon chlorotic mosaic virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Cannabis cryptic virus;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 1;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__;g__;s__Bat tymo-like virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-9;t__ 0 0 0 0 0 0 0 34 34 k__Viroids;p__;c__;o__;f__;g__;s__Cherry small circular viroid-like RNA;t__Cherry small circular viroid-like RNA 1 0 0 0 0 0 0 0 8 8 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato mosaic virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Spleen focus-forming virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__ubei picorna-like virus 3;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 43;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Abutilon mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__BacteriaPlasmid;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Francisellaceae;g__Francisella;s__Francisella philomiragia;t__Francisella philomiragia subsp. philomiragia ATCC 25017 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Orthomyxoviridae;g__;s__Tilapia lake virus;t__ 0 0 0 0 0 0 0 188 188 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Eimeria brunetti RNA virus 1;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 3;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Penicillium stoloniferum virus F;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Grapevine Syrah virus 1;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 9;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Mindanao virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 4;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Paspalum striate mosaic virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum yellow vein China alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Shanghai virus;t__ 0 0 0 0 0 2 0 54 56 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum yellow vein China betasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__LI polyomavirus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 5;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Bhindi yellow vein alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Tomato yellow leaf curl Thailand betasatellite;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Zaka;t__Mycobacterium phage Artemis2UCLA 0 0 0 0 0 431 0 615 1046 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 125;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Virgaviridae;g__Furovirus;s__Soil-borne cereal mosaic virus;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 46;t__ 0 0 0 0 0 0 0 183 183 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Chili leaf curl betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsRNA viruses;c__Amalgaviridae;o__;f__;g__;s__Southern tomato virus;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 24;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Asparagus virus 3;t__ 0 0 0 0 0 0 0 138 138 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__;s__Atlantic salmon calicivirus;t__ 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Hemidesmus yellow mosaic virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei yanvirus-like virus 1;t__ 0 0 0 0 0 0 0 116 116 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl virus;t__ 0 0 0 0 0 13 0 43 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Oxalis yellow vein virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Machlomovirus;s__Maize chlorotic mottle virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Mimosa yellow leaf curl virus-associated DNA 1;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Pelarspovirus;s__Elderberry latent virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Toros virus;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 21;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Chino del tomate virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium poae mitovirus 4;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus PHL199M00;t__Propionibacterium phage PHL199M00 0 0 0 0 4 25 0 567 596 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__;s__Chicken orivirus 1;t__ 0 0 0 0 0 0 0 140 140 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Japanese holly fern mottle virus;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum Yellow vein China virus - OX1;t__ 0 0 0 0 0 18 0 36 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei toti-like virus 13;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia tombus-like virus 8;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Crassocephalum yellow vein virus;t__Crassocephalum yellow vein virus - Jinghong 0 0 0 0 0 3 0 51 54 k__Viruses;p__unclassified viruses;c__Bovine faeces associated circular DNA molecule 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 29 29 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 35;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Deinbollia mosaic virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Coopervirus;s__Mycobacterium virus Nigel;t__Mycobacterium phage Nigel 0 0 0 0 0 6 0 1392 1398 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium phage MarQuardt;t__ 0 0 0 0 0 507 0 510 1017 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Rhynchosia golden mosaic Yucatan virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Corchorus yellow vein mosaic virus;t__ 0 0 0 0 0 3 0 51 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato enation leaf curl virus;t__ 0 0 0 0 0 28 0 27 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Panicovirus;s__Cocksfoot mild mosaic virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 21;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Coleus vein necrosis virus;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Betatorquevirus;s__Torque teno mini virus 2;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Cardiovirus;s__Cardiovirus A;t__Encephalomyocarditis virus 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Carrot mottle virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 6;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Turnip crinkle virus satellite RNA;t__Turnip crinkle virus virulent satellite RNA C 0 0 0 0 0 0 0 7 7 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Permutotetraviridae;g__Alphapermutotetravirus;s__Euprosterna elaeasa virus;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Capraria yellow spot Yucatan virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Coconut foliar decay alphasatellite;t__ 0 0 0 0 0 0 0 25 25 k__Viruses;p__unclassified viruses;c__Daeseongdong virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Euphorbia mosaic virus;t__Euphorbia mosaic virus - A [Mexico:Yucatan:2004] 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Alphacarmovirus;s__Nootka lupine vein clearing virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Human associated gemykibivirus 1;t__MSSI2.225 virus 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen4707_41;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Parabacteroides phage YZ-2015b;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Salivirus;s__Salivirus FHB;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus G;t__Porcine enterovirus 9 0 0 0 0 0 0 0 147 147 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tapeworm virus 1;t__ 0 0 0 0 0 0 0 212 212 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Desmodium leaf distortion virus;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-19;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean golden yellow mosaic virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Fusarium globosum mitovirus 1;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Dyokappapapillomavirus;s__Dyokappapapillomavirus 2;t__Rupicapra rupicapra papillomavirus 1 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 13;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida chlorotic vein virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Joydebpur virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Madagascar virus;t__Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001] 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Axarquia virus;t__ 0 0 0 0 0 22 0 33 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato rugose yellow leaf curl virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai zhaovirus-like virus 5;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__;s__Rodent Torque teno virus 2;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 99;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-22;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sunflower leaf curl Karnataka alphasatellite;t__ 0 0 0 0 0 1 0 25 26 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Wissadula golden mosaic virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Mud crab dicistrovirus;t__ 0 0 0 0 0 0 0 208 208 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bhendi yellow vein India virus;t__Bhendi yellow vein India virus [India:Dharwad OYDWR2:2006] 0 0 0 0 0 7 0 47 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl New Delhi virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Dalechampia chlorotic mosaic virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Sauropus leaf curl disease associated DNA beta;t__ 0 0 0 0 0 0 0 13 13 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Chayote yellow mosaic virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 2;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Hollyhock leaf crumple virus satellite DNA;t__ 0 2 0 0 0 0 0 12 14 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Becurtovirus;s__Beet curly top Iran virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Indian cassava mosaic virus;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Platypuvirus;s__Donkey orchid symptomless virus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sunn hemp leaf distortion virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 1;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Bangladesh virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow mottle virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Abutilon mosaic Bolivia virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 32;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 34;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-20;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 32 32 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 13;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-3;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-33;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Lemur smacovirus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__;s__Macrobrachium rosenbergii nodavirus;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 103;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Ross's goose hepatitis B virus;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Picornavirales Tottori-HG1;t__ 0 0 0 0 0 0 0 197 197 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Stachytarpheta leaf curl virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Andean potato latent virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Faeces associated gemycircularvirus 16;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus D;t__Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN 0 0 0 0 0 0 0 161 161 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 5;t__ 0 0 0 0 0 23 0 147 170 k__Viruses;p__Satellites;c__ssDNA satellites;o__;f__;g__;s__Ctenophore-associated circular genome 3;t__ 0 0 0 0 0 2 0 22 24 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Betapapillomavirus;s__Betapapillomavirus 6;t__Macaca fascicularis papillomavirus 2 0 0 0 0 0 0 0 152 152 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra yellow vein mosaic virus TJ-2016a;t__ 0 0 0 0 0 9 0 45 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 5;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 52;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 28;t__ 0 0 0 0 0 0 0 48 48 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Foxtail mosaic virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Rice yellow mottle virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Pig stool associated circular ssDNA virus;t__Pig stool associated circular ssDNA virus GER2011 0 0 0 0 0 0 0 49 49 k__Viroids;p__;c__;o__;f__;g__;s__Mulberry small circular viroid-like RNA 1;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-40;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra leaf curl Oman virus;t__ 0 0 0 0 0 6 0 49 55 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Alpha3microvirus;s__Escherichia virus alpha3;t__Enterobacteria phage alpha3 0 0 0 0 0 1 0 120 121 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein Honghe virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mosaic Buckup virus;t__Sida golden mosaic Buckup virus-[Jamaica:St. Elizabeth:2004] 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kunsagivirus;s__Bat kunsagivirus;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Reptarenavirus;s__Alethinophid 1 reptarenavirus;t__Golden Gate virus 0 0 0 0 0 0 0 206 206 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Ungulate bocaparvovirus 5;t__Porcine bocavirus 4-1 0 0 0 0 0 0 0 103 103 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-24;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 32 32 k__Viruses;p__Satellites;c__ssDNA satellites;o__;f__;g__;s__Ctenophore-associated circular genome 4;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-6;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mimosa yellow leaf curl virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Fragaria chiloensis cryptic virus;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei partiti-like virus 11;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__;s__Rattus norvegicus papillomavirus 3;t__ 0 0 0 0 0 0 0 154 154 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato mild mosaic virus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Olive viral satellite RNA;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Siegesbeckia yellow vein Guangxi virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Miscanthus streak virus;t__Miscanthus streak virus - [91] 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly circularisvirus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Gujarat virus;t__ 0 0 0 0 0 1 0 106 107 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dragonfly associated cyclovirus 1;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Laos virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Bat sapovirus;t__ 0 0 0 0 0 0 0 149 149 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Cucumber necrosis virus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 38;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Ourmiavirus;s__Cassava virus C;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Opium poppy mosaic virus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-19;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Bromus associated gemycircularvirus 1;t__Bromus-associated circular DNA virus 3 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome SAR-A;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-36;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__East African cassava mosaic Cameroon virus;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 8;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 4;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Avihepadnavirus;s__Duck hepatitis B virus;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Squamate dependoparvovirus 1;t__Snake adeno-associated virus 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Cereal yellow dwarf virus-RPV;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__South African cassava mosaic virus;t__ 0 0 0 0 0 1 0 108 109 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 18;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 17;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Murine osteosarcoma virus;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Dicistroviridae;g__;s__Goose dicistrovirus;t__ 0 0 0 0 0 0 0 182 182 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Izzy;t__ 0 0 0 0 0 168 0 834 1002 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__;s__Pseudomonas phage vB_PaeP_PAO1_Ab05;t__ 0 0 0 0 279 0 0 593 872 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling tombus-like virus 1;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Bovine hepacivirus;t__ 0 0 0 0 0 0 0 176 176 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 4;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Macanavirus;s__Furcraea necrotic streak virus;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage 39HC;t__ 0 0 0 0 0 35 0 1396 1431 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Grapevine rupestris vein feathering virus;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__unclassified bacterial viruses;c__Propionibacterium phage PFR2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 790 792 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 6;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Helminthosporium victoriae virus 190S;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Alphanodavirus;s__Black beetle virus;t__ 0 0 0 0 0 27 0 61 88 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__Pradovirus;s__Xylella virus Prado;t__Xylella phage Prado 0 0 0 0 0 0 0 878 878 k__Viruses;p__unclassified viruses;c__Duck faeces associated circular DNA virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Thetapapillomavirus;s__Thetapapillomavirus 1;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Florida woods cockroach-associated cyclovirus;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Ixeridium yellow mottle virus 2;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Jovo;t__ 0 0 0 0 0 0 0 1026 1026 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Blueberry;t__ 0 0 0 0 0 64 0 1010 1099 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pipefishvirus;s__Mycobacterium virus Gadjet;t__Mycobacterium phage Gadjet 0 0 0 0 601 337 0 420 1358 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-30;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-10;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang polero-like virus 1;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Cheravirus;s__Apple latent spherical virus;t__ 0 0 0 0 0 0 0 202 202 k__Viruses;p__ssDNA viruses;c__Nanoviridae;o__;f__;g__Nanovirus;s__Milk vetch dwarf virus;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling crustacean virus 5;t__ 0 0 0 0 0 0 0 210 210 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__Nucleorhabdovirus;s__Eggplant mottled dwarf nucleorhabdovirus;t__ 0 0 0 0 0 0 0 261 261 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-27;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Mononegavirales;f__Rhabdoviridae;g__;s__Farmington virus;t__ 0 0 0 0 0 0 0 244 244 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyce phage TG1;t__ 0 0 0 0 0 0 0 809 809 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pipefishvirus;s__Mycobacterium virus Pipefish;t__Mycobacterium phage Pipefish 0 0 0 0 0 0 0 1381 1381 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Cronartium ribicola mitovirus 5;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Maculavirus;s__Grapevine Red Globe virus;t__ 0 0 0 0 0 0 0 137 137 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Abutilon Brazil virus;t__ 0 0 0 0 0 5 0 98 103 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 14;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang narna-like virus 4;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Sujidade;t__ 0 0 0 0 0 0 0 1031 1031 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 1;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 9;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__Virus families not assigned to an order;c__Pleolipoviridae;o__;f__;g__Betapleolipovirus;s__Halogeometricum virus HGPV-1;t__Halogeometricum pleomorphic virus 1 0 0 0 0 0 0 0 193 193 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling chuvirus-like virus 1;t__ 0 0 0 0 0 0 0 131 131 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Mitovirus;s__Sclerotinia sclerotiorum mitovirus 1;t__Sclerotinia sclerotiorum mitovirus 1 HC025 0 0 0 0 0 0 0 50 50 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou picorna-like virus 33;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Equine associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 18 0 0 0 0 0 0 0 44 44 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Cassava associated gemycircularvirus 1;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Aphthovirus;s__Bovine rhinovirus 1;t__ 0 0 0 0 0 0 0 145 145 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Sri Lanka virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Hepeviridae;g__;s__Avian hepatitis E virus;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida mosaic Alagoas virus;t__ 0 0 0 0 0 4 0 100 104 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Palaemonetes intermedius brackish grass shrimp associated circular virus;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Allexivirus;s__Garlic virus E;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__;g__;s__Posavirus 3;t__ 0 0 0 0 0 0 0 177 177 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 2;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Alphapartitivirus;s__Rhizoctonia solani dsRNA virus 3;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 2;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean chlorosis virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato chlorotic mottle virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__Virus families not assigned to an order;c__Botybirnavirus;o__;f__;g__;s__Botrytis porri botybirnavirus 1;t__ 0 0 0 0 0 0 0 240 240 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Lannister;t__ 0 0 0 0 0 27 0 976 1003 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Sapporo virus;t__Sapovirus isolates 0 0 0 0 0 0 0 150 150 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Jatropha mosaic Nigerian virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 13;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Porcine faeces associated smacovirus 1;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Chipapillomavirus;s__Chipapillomavirus 2;t__Canine papillomavirus 4 0 0 0 0 0 0 0 154 154 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Finch polyomavirus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage McGonagall;t__ 0 0 0 0 0 0 0 342 342 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pamx74virus;s__Pseudomonas virus PaMx74;t__Pseudomonas phage PaMx74 0 0 0 0 0 0 0 1169 1169 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Zetatorquevirus;s__Torque teno douroucouli virus;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 11;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Mallard associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 7 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 20;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato golden mottle virus;t__ 0 0 0 0 0 0 0 101 101 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium roseum;t__Streptosporangium roseum DSM 43021 0 0 0 0 0 0 0 543 564 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Hosp;t__ 0 0 0 0 0 648 0 765 1413 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage LittleCherry;t__ 0 0 0 0 0 135 0 878 1013 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Podoviridae;g__T7virus;s__Xanthomonas phage Cf1c;t__ 0 0 0 0 0 0 0 146 146 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Nanodon;t__ 0 0 0 0 0 22 0 979 1001 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Amela;t__ 0 0 0 0 0 0 0 989 989 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sicinivirus;s__Sicinivirus A;t__ 0 0 0 0 0 0 0 185 185 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Nidovirales;f__Arteriviridae;g__Nesartevirus;s__African pouched rat arterivirus;t__ 0 0 0 0 0 0 0 299 299 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Adzzy;t__ 0 0 0 0 1 0 0 1049 1050 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage 40AC;t__ 0 0 0 0 0 1 0 1066 1067 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Bovine kobuvirus;t__ 0 0 0 0 0 0 0 167 167 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage KayaCho;t__ 0 0 0 0 0 0 0 1416 1416 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Mycobacterium phage Pioneer;t__ 0 0 0 0 151 0 0 913 1064 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__Deltasatellite;s__Tomato leaf curl deltasatellite;t__ 0 0 0 0 0 0 0 13 13 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Okra leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Maize-associated totivirus 1;t__ 0 0 0 0 0 0 0 79 79 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Allium virus X;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Microbacterium phage Min1;t__ 0 0 0 0 0 0 0 927 927 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Hepeviridae;g__Orthohepevirus;s__Orthohepevirus D;t__ 0 0 0 0 0 0 0 133 133 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__L5virus;s__Mycobacterium virus Ridgecb;t__Mycobacterium phage RidgeCB 0 0 0 0 436 198 0 382 1016 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Persimmon cryptic virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__;f__Arenaviridae;g__Mammarenavirus;s__Lujo mammarenavirus;t__ 0 0 0 0 0 0 0 205 205 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Teschovirus;s__Teschovirus A;t__ 0 0 0 0 0 0 0 142 142 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shuangao insect virus 11;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Sinapis alba cryptic virus 1;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Gokushovirinae Bog5712_52;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 58;t__ 0 0 0 0 0 0 0 168 168 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Betapartitivirus;s__Fusarium poae virus 1;t__ 0 0 0 0 0 0 0 85 85 k__Viruses;p__unassigned viruses;c__Virtovirus;o__;f__;g__;s__Tobacco virtovirus 1;t__Satellite tobacco mosaic virus 0 0 0 0 0 0 0 24 24 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 55;t__ 0 0 0 0 0 0 0 173 173 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 11 LDMD-2013;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Rose leaf curl virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Karnataka virus;t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 2;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Po-Circo-like virus 41;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Human associated gemykibivirus 5;t__Gemycircularvirus HV-GcV2 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly cyclicusvirus;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__UR2 sarcoma virus;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Carrot red leaf virus;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 19;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Deltapartitivirus;s__Fig cryptic virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 35;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Alphatorquevirus;s__Torque teno virus 19;t__ 0 0 0 0 0 1 0 75 76 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 22;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-32;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Tombusvirus;s__Cucumber Bulgarian virus;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Kennedya yellow mosaic virus;t__ 0 0 0 0 0 0 0 127 127 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Giardiavirus;s__Giardia lamblia virus;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Diaporthe ambigua RNA virus 1;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Ungulate bocaparvovirus 5;t__Porcine bocavirus 3 0 0 0 0 0 0 8 97 105 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Euphorbia yellow mosaic virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-12;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato golden leaf spot virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean yellow mosaic Mexico virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Callinectes ornatus blue crab associated circular virus;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__;s__Bee Macula-like virus;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Gremmeniella abietina RNA virus L1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Labidocera aestiva circovirus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus E;t__Rabbit picornavirus 0 0 0 0 0 0 0 167 167 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bhendi yellow vein mosaic virus;t__ 0 0 0 0 0 6 0 48 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean chlorotic mosaic virus;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Xinzhou partiti-like virus 1;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou crab virus 4;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 2;t__ 0 0 0 0 0 0 0 174 174 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Botryosphaeria dothidea virus 1;t__ 0 0 0 0 0 0 0 166 166 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Ourmiavirus;s__Epirus cherry virus;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Gordonia phage Remus;t__ 0 0 0 0 0 0 0 1054 1054 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Alphapolyomavirus;s__Papio cynocephalus polyomavirus 1;t__Yellow baboon polyomavirus 1 0 0 0 0 1 0 0 100 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Southern bean mosaic virus;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 13;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Columbid circovirus;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Aureusvirus;s__Pothos latent virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Porcine stool-associated circular virus 4;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Hollyhock yellow vein mosaic Islamabad virus;t__ 0 0 0 0 0 4 0 50 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 24;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Ageratum yellow vein Sri Lanka virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Spissistilus festinus virus 1;t__ 0 0 0 0 0 0 0 159 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tetragnatha maxillosa virus 6;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Stenotrophomonas phage phiSMA7;t__ 0 0 0 0 0 0 0 141 141 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-3;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Gammacarmovirus;s__Soybean yellow mottle mosaic virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou shrimp virus 9;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein Baoshan virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 13;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Ydn12virus;s__Streptomyces virus YDN12;t__Streptomyces phage YDN12 0 0 0 0 0 13 0 1117 1130 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Bromoviridae;g__Bromovirus;s__Cassia yellow blotch virus;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Tymovirus;s__Eggplant mosaic virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Lika;t__ 0 0 0 0 0 447 0 578 1025 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 17;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Pegivirus;s__Rodent pegivirus;t__ 0 0 0 0 0 0 0 225 225 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 22;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Tsukamurella phage TPA2;t__ 0 0 0 0 0 0 0 1228 1228 k__Viruses;p__dsDNA viruses, no RNA stage;c__Papillomaviridae;o__;f__;g__Psipapillomavirus;s__Psipapillomavirus 1;t__Rousettus aegyptiacus papillomavirus 1 0 0 0 0 0 0 0 159 159 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 7;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__Genomoviridae;c__unclassified Genomoviridae;o__;f__;g__;s__Thrips-associated genomovirus 3;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__unassigned viruses;c__Bacilladnavirus;o__;f__;g__;s__Amphibola crenata associated bacilladnavirus 2;t__ 0 0 0 0 0 0 0 91 91 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Sakobuvirus;s__Feline sakobuvirus A;t__ 0 0 0 0 0 0 0 156 156 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Alfalfa latent virus;t__ 0 0 0 0 0 0 0 160 160 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Alpharetrovirus;s__Y73 sarcoma virus;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Enterovirus;s__Enterovirus F;t__ 0 0 0 0 0 0 0 147 147 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Beet mild yellowing virus;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Peristrophe mosaic virus;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Flaviviridae;g__Hepacivirus;s__Hepatitis C virus;t__ 0 0 0 0 0 0 0 192 192 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mirabilis leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-5;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Groundnut rosette virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Trichomonasvirus;s__Trichomonas vaginalis virus 3;t__ 0 0 0 0 0 0 0 96 96 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Bocaparvovirus;s__Rhinolophus sinicus bat bocaparvovirus;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 6 LDMD-2013;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Spinach yellow vein Sikar virus;t__ 0 0 0 0 0 2 0 53 55 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Corchorus yellow vein mosaic betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 5;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 2;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai picorna-like virus 70;t__ 0 0 0 0 0 0 0 184 184 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Streptomyces phage Caliburn;t__ 0 0 0 0 0 2 0 996 998 k__Viruses;p__ssDNA viruses;c__Anelloviridae;o__;f__;g__Etatorquevirus;s__Torque teno felis virus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__unclassified viruses;c__Bovine faeces associated circular DNA virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 61 61 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sweet potato leaf curl Georgia virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Luteovirus;s__Barley yellow dwarf virus-MAV;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 27;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Chicken associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 20 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Panicovirus;s__Bermuda grass latent virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Sapovirus;s__Sapporo virus;t__Sapovirus isolates 0 0 0 0 0 0 0 148 148 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus Tu789;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bastrovirus-like_virus/VietNam/Bat/17819_21;t__ 0 0 0 0 0 0 0 110 110 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 13;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Citrus sudden death-associated virus;t__ 0 0 0 0 0 0 0 136 136 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 23;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Enterobacteria phage Hgal1;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Ctenophore-associated circular virus 4;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Hanoi virus;t__ 0 0 0 0 0 3 0 51 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Papaya leaf curl China virus;t__ 0 0 0 0 0 1 0 54 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__;s__Chicken calicivirus;t__ 0 0 0 0 0 0 0 163 163 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__;s__Goose hemorrhagic polyomavirus;t__ 0 0 0 0 0 0 0 105 105 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Sphaeropsis sapinea RNA virus 1;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__unclassified viruses;c__Penicillium aurantiogriseum bipartite virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 76 76 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 21;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe isopoda virus 3;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Bhendi yellow vein mosaic alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe tombus-like virus 1;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-1;t__ 0 0 0 0 0 0 0 21 21 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein Yunnan virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 22;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen7895_21;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 15;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Sphaeropsis sapinea RNA virus 2;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 48;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bastrovirus/VietNam/Rat/16715_26;t__ 0 0 0 0 0 0 0 118 118 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__;s__Penicillium digitatum virus 1;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Dependoparvovirus;s__Adeno-associated dependoparvovirus B;t__Adeno-associated virus - 5 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Acartia tonsa copepod circovirus;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang crawfish virus 7;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow mosaic China virus;t__Sida yellow mosaic China virus - [Hainan 8] 0 0 0 0 0 0 0 55 55 k__ArchaeaPlasmid;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Thermococcus;s__Thermococcus eurythermalis;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__ssRNA viruses;c__unassigned ssRNA viruses;o__;f__Alvernaviridae;g__Dinornavirus;s__Heterocapsa circularisquama RNA virus;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Porcine astrovirus 3;t__ 0 0 0 0 0 0 0 129 129 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 18;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__;s__Rhodococcus phage RRH1;t__ 0 0 0 0 0 0 0 285 285 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__Norovirus;s__Norwalk virus;t__Norovirus GIII 0 0 0 0 0 0 0 146 146 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou yanvirus-like virus 2;t__ 0 0 0 0 0 0 0 125 125 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__;s__Varroa Tymo-like virus;t__ 0 0 0 0 0 0 0 123 123 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Alphaflexiviridae;g__Potexvirus;s__Asparagus virus 3;t__ 0 0 0 0 0 0 0 139 139 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling tombus-like virus 5;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei mosquito virus 4;t__ 0 0 0 0 0 0 0 99 99 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 12;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-23;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Kobuvirus;s__Aichivirus C;t__Porcine kobuvirus swine/S-1-HUN/2007/Hungary 0 0 0 0 0 0 1 163 164 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato yellow leaf curl Vietnam virus;t__ 0 0 0 0 0 2 0 52 54 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-16;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cymbidium ringspot virus satellite RNA;t__ 0 0 0 0 0 0 0 12 12 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bhendi yellow vein Bhubhaneswar virus;t__ 0 0 0 0 0 5 0 50 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Oat blue dwarf virus;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Mosquito circovirus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Porcine circovirus type 1/2a;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Marafivirus;s__Maize rayado fino virus;t__ 0 0 0 0 0 0 0 126 126 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Grapevine fanleaf virus satellite RNA;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 7;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Avenavirus;s__Oat chlorotic stunt virus;t__ 0 0 0 0 0 0 0 82 82 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 3;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Fusarium poae narnavirus 2;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Myoviridae;g__P2virus;s__Burkholderia virus phi52237;t__ 0 0 0 0 0 0 0 752 752 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Dragonfly-associated alphasatellite;t__ 0 0 0 0 0 0 0 29 29 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 18;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Southern cowpea mosaic virus;t__ 0 0 0 0 0 0 0 83 83 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Digitaria ciliaris striate mosaic virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA 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DCCV-7;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-5;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 24;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 8;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai noda-like virus 29;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 12;t__ 0 0 0 0 0 0 0 121 121 k__BacteriaPlasmid;p__Deinococcus-Thermus;c__Deinococci;o__Thermales;f__Thermaceae;g__Thermus;s__Thermus scotoductus;t__Thermus scotoductus SA-01 0 0 0 0 0 0 0 120 167 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Aureusvirus;s__Yam spherical 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k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sphaeromadae virus 3;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Enterobacteria phage C-1 INW-2012;t__ 0 0 0 0 0 0 0 70 70 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mosaic virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Turkey stool associated circular ssDNA virus;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly-associated microphage 1;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Avian gyrovirus 2;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe narna-like virus 2;t__ 0 0 0 0 0 0 0 67 67 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang picorna-like virus 6;t__ 0 0 0 0 0 0 0 169 169 k__Viruses;p__unclassified viruses;c__Cladosporium cladosporioides virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Macroptilium yellow spot virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei odonate virus 12;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__unclassified viruses;c__Chamois faeces associated circular DNA virus 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 15;t__ 0 0 0 0 0 0 0 94 94 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei noda-like virus 17;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 21;t__ 0 0 0 0 0 0 0 57 57 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Cocksfoot mottle virus;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__unclassified viruses;c__Anopheline-associated C virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Paspalum dilatatum striate mosaic virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Betaflexiviridae;g__Carlavirus;s__Narcissus common latent virus;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 20;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssDNA viruses;c__Parvoviridae;o__;f__;g__Protoparvovirus;s__Porcine parvovirus 2;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 1;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Oyster mushroom spherical virus;t__ 0 0 0 0 0 0 0 115 115 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 10;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 20;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__Inovirus;s__Ralstonia phage RSS30;t__ 4 0 0 0 27 6 0 134 171 k__BacteriaPlasmid;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Pelagibacterium;s__Pelagibacterium halotolerans;t__Pelagibacterium halotolerans B2 0 0 0 0 0 0 0 49 80 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__;s__Beet western yellows ST9 associated virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Human cyclovirus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Inoviridae;o__;f__;g__;s__Ralstonia phage PE226;t__ 0 0 0 0 0 0 0 109 109 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 42;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Corchorus yellow spot virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Picornaviridae;g__Gallivirus;s__Gallivirus Pf-CHK1/GV;t__ 0 0 0 0 0 0 0 170 170 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dragonfly associated cyclovirus 4;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome CB-A;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida micrantha mosaic virus;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome CB-B;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 27;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida golden mosaic Honduras virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow vein virus;t__ 0 0 0 0 0 1 0 51 52 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 7;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Panicum streak virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-34;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Porcine circovirus 3;t__ 0 0 0 0 10 0 0 29 39 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Citrus chlorotic dwarf associated virus;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai weivirus-like virus 1;t__ 0 0 0 0 0 0 0 100 100 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 16;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__unclassified viruses;c__CHIV14;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Tombusviridae;g__Umbravirus;s__Ethiopian tobacco bushy top virus;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Escherichia virus MS2;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Fusarium poae victorivirus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__dsDNA viruses, no RNA stage;c__Caudovirales;o__;f__Siphoviridae;g__Pa6virus;s__Propionibacterium virus Ouroboros;t__Propionibacterium phage Ouroboros 0 0 0 0 14 22 0 554 590 k__Viruses;p__Genomoviridae;c__unclassified Genomoviridae;o__;f__;g__;s__Thrips-associated genomovirus 4;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 23;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai noda-like virus 18;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Fen7940_21;t__ 0 0 0 0 0 0 0 89 89 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Magnaporthe oryzae virus 3;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Alphatetraviridae;g__Omegatetravirus;s__Helicoverpa armigera stunt virus;t__ 0 0 0 0 0 0 0 153 153 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 45;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Goose circovirus;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Phytomonas serpens narnavirus 1;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dragonfly associated cyclovirus 3;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow blotch virus;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 11;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Blueberry shoestring virus;t__ 0 0 0 0 0 0 0 80 80 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__Orthohepadnavirus;s__Tent-making bat hepatitis B virus;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DHCV-5;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Rift Valley fever phlebovirus;t__Rift Valley fever virus 0 0 0 0 0 0 0 235 235 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Totivirus;s__Black raspberry virus F;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 2;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Gammapartitivirus;s__Gremmeniella abietina RNA virus MS1;t__ 0 0 0 0 0 0 0 87 87 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-13;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 31 31 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__Maculavirus;s__Fig fleck-associated virus;t__ 0 0 0 0 0 0 0 134 134 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 8;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei picorna-like virus 11;t__ 0 0 0 0 0 0 0 179 179 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-3;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-28;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-35;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe narna-like virus 5;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Soybean mild mottle virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Sewage-associated gemycircularvirus 10;t__Sewage-associated gemycircularvirus-10a 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow mosaic virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Sobemovirus;s__Imperata yellow mottle virus;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-35;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 69 69 k__Viruses;p__ssRNA viruses;c__ssRNA negative-strand viruses;o__Bunyavirales;f__Phenuiviridae;g__Phlebovirus;s__Zerdali virus;t__ 0 0 0 0 0 0 0 128 128 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Wheat dwarf India virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Caliciviridae;g__;s__Calicivirus isolate TCG;t__ 0 0 0 0 2 0 0 147 149 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai victori-like virus 1;t__ 0 0 0 0 0 0 0 95 95 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Saccharum streak virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Mongoose associated gemykibivirus 1;t__Mongoose feces-associated gemycircularvirus b 0 0 0 0 0 0 0 43 43 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cuban alphasatellite 1;t__ 0 0 0 0 0 0 0 25 25 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai zhaovirus-like virus 3;t__ 0 0 0 0 0 0 0 108 108 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Squash leaf curl Yunnan virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 3;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow mosaic virus;t__ 0 0 0 0 0 2 0 51 53 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 16;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 4;t__ 0 0 0 0 0 0 0 84 84 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Tymovirales;f__Tymoviridae;g__;s__Poinsettia mosaic virus;t__ 0 0 0 0 0 0 0 121 121 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra yellow vein mosaic virus;t__ 0 0 0 0 0 9 0 45 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra leaf curl India virus;t__Okra leaf curl India virus [India:Sonipat EL14A:2006] 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra enation leaf curl virus;t__Okra enation leaf curl virus [India:Munthal EL37:2006] 0 0 0 0 0 12 0 42 54 k__Viruses;p__Retro-transcribing viruses;c__Retroviridae;o__;f__;g__Gammaretrovirus;s__Woolly monkey sarcoma virus;t__ 0 0 0 0 0 0 0 103 103 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Bromus-associated circular DNA virus 4;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Groundnut rosette virus satellite RNA;t__ 0 0 0 0 0 0 0 17 17 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou tombus-like virus 3;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 9;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 21 LDMD-2013;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__Levivirus;s__Pseudomonas phage PP7;t__ 0 0 0 0 0 0 0 71 71 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 23;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__Alphapartitivirus;s__Beet cryptic virus 1;t__ 0 0 0 0 0 0 0 74 74 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan house centipede virus 4;t__ 0 0 0 0 0 0 0 86 86 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 18;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Cryphonectria parasitica bipartite mycovirus 1;t__ 0 0 0 0 0 0 0 73 73 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome RW-D;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-21;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 35 35 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Citrus bent leaf viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Tomato apical stunt viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Pepper leaf curl virus satellite DNA beta;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Soybean crinkle leaf virus;t__ 0 0 0 0 0 0 0 54 54 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__;s__Dahlia latent viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Apple scar skin viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei diptera virus 18;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Ranchi virus;t__ 0 0 0 0 0 4 0 51 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__European catfish circovirus;t__Silurus glanis circovirus 0 0 0 0 0 0 0 39 39 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ludwigia leaf distortion betasatellite;t__Ludwigia leaf distortion betasatellite [India:Amadalavalasa:Hibiscus:2007] 0 0 0 0 0 2 0 25 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Croton yellow vein mosaic alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 5;t__ 0 0 0 0 0 0 0 78 78 k__Viruses;p__unclassified viruses;c__Bovine faeces associated circular DNA virus 2;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Grapevine associated narnavirus-1;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Jingmen tombus-like virus 2;t__ 0 0 0 0 0 0 0 81 81 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Dragonfly-associated mastrevirus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Pakistan virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pedilanthus leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic yellows C1 alphasatellite;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Burkina Faso virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Paramuricea placomus associated circular virus;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 7;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-15;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sclerotinia sclerotiorum hypovirulence associated DNA virus 1;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__dsDNA viruses, no RNA stage;c__Polyomaviridae;o__;f__;g__Gammapolyomavirus;s__Aves polyomavirus 1;t__Budgerigar fledgling disease virus - 1 0 0 0 0 0 0 0 99 99 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 8;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 25;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Hollyhock leaf crumple virus;t__ 0 0 0 0 0 5 0 50 55 k__Viruses;p__unclassified viruses;c__Ancient caribou feces associated virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Pepper yellow vein Mali virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Telfairia mosaic virus;t__ 0 0 0 0 0 0 0 106 106 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Enamovirus;s__Pea enation mosaic virus-1;t__ 0 0 0 0 0 0 0 114 114 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Leviviridae;g__;s__Caulobacter phage phiCb5;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Dragonfly associated cyclovirus 5;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai barnacle virus 12;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sporobolus striate mosaic virus 1;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Chlamydiamicrovirus;s__Chlamydia virus Chp1;t__ 0 0 0 0 0 0 0 97 97 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__PoSCV Kor J481;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Beet black scorch virus satellite RNA;t__ 0 0 0 0 0 0 0 12 12 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Citrus dwarfing viroid;t__ 0 0 0 0 0 0 0 5 5 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum leaf curl Cameroon betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 17;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__Picornavirales;f__Secoviridae;g__Nepovirus;s__Potato black ringspot virus;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DHCV-3;t__ 0 0 0 0 0 0 0 40 40 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Bifidobacteriales;f__Bifidobacteriaceae;g__Bifidobacterium;s__Bifidobacterium longum;t__Bifidobacterium longum NCC2705 0 0 0 0 0 0 0 72 72 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Synedrella leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Oat dwarf virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Mongoose associated gemycircularvirus 1;t__Mongoose feces-associated gemycircularvirus d 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Callinectes sapidus associated circular virus;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Trichomonasvirus;s__Trichomonas vaginalis virus 2;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Alternaria longipes dsRNA virus 1;t__ 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato chino La Paz virus;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato curly stunt virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__;g__Ourmiavirus;s__Botrytis ourmia-like virus;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 28;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Luteoviridae;g__Polerovirus;s__Luffa aphid-borne yellows virus;t__ 0 0 0 0 0 0 0 119 119 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Botryotinia fuckeliana partitivirus 1;t__ 0 0 0 0 0 0 0 90 90 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__French bean leaf curl betasatellite-Kanpur;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae SFBeef;t__ 0 0 0 0 0 0 0 17 17 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Papaya leaf curl Guandong virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Black robin associated gemykibivirus 1;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__Mamastrovirus;s__Bovine astrovirus;t__ 0 0 0 0 0 0 0 124 124 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Hepeviridae;g__Orthohepevirus;s__Orthohepevirus A;t__Hepatitis E virus 0 0 0 0 0 0 0 143 143 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Urochloa streak virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Ustilaginoidea virens RNA virus 1;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Bat associated circovirus 2;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Shahe picorna-like virus 14;t__ 0 0 0 0 0 0 0 207 207 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Okra leaf curl Cameroon virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Gezira virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Common bean-associated gemycircularvirus;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Wheat dwarf virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Gyrovirus;s__Gyrovirus Tu243;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Sheep faeces associated smacovirus 3;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Sinaloa virus;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Astroviridae;g__;s__Bovine astrovirus CH13;t__ 0 0 0 0 0 0 0 130 130 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Curvularia thermal tolerance virus;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cassava mosaic Madagascar alphasatellite;t__ 0 0 0 0 0 0 0 29 29 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Sida yellow mottle virus;t__ 0 0 0 0 0 0 0 102 102 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 20;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou narna-like virus 2;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Human smacovirus 1;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 16;t__ 0 0 0 0 0 0 0 62 62 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-46;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Subterranean clover mottle virus satellite RNA;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__narna-like virus 6;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-2;t__ 0 0 0 0 0 0 0 47 47 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avian-like circovirus;t__ 0 0 0 0 0 0 0 38 38 k__Viruses;p__Deltavirus;c__Hepatitis delta virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 33 33 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Cyanoramphus nest associated circular X DNA virus;t__ 0 0 0 0 0 0 0 46 46 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Grapevine yellow speckle viroid 2;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Bat associated cyclovirus 10;t__Bat circovirus POA/2012/VI 0 0 0 0 0 0 0 35 35 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Pea enation mosaic virus satellite RNA;t__ 0 0 0 0 0 0 0 14 14 k__Viruses;p__Genomoviridae;c__Gemygorvirus;o__;f__;g__;s__Mallard associated gemygorvirus 1;t__Faeces associated gemycircularvirus 14 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 12;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan insect virus 18;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular virus-48;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Curtovirus;s__Beet curly top virus;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 1;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Verbesina encelioides leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Nigrospora oryzae victorivirus 1;t__ 0 0 0 0 0 0 0 101 101 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Cyanoramphus nest associated circular K DNA virus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Fusarium poae narnavirus 1;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circoviridae 10 LDMD-2013;t__ 0 0 0 0 0 0 0 66 66 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 26;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Ctenophore-associated circular virus 3;t__ 0 0 0 0 0 0 0 34 34 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato dwarf leaf virus;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-15;t__ 0 0 0 0 0 0 0 32 32 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Petrochirus diogenes giant hermit crab associated circular virus;t__ 0 0 0 0 0 0 0 36 36 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 15;t__ 0 0 0 0 0 0 0 72 72 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia sobemo-like virus 5;t__ 0 0 0 0 0 0 0 63 63 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling narna-like virus 1;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__;s__Grapevine geminivirus A;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Axonopus compressus streak virus;t__ 0 0 0 0 0 0 0 57 57 k__BacteriaPlasmid;p__Actinobacteria;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces albulus;t__ 0 0 0 0 0 0 0 240 242 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tobacco leaf curl PUSA alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum yellow vein alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenling picorna-like virus 3;t__ 0 0 0 0 0 0 0 204 204 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum leaf curl Guangdong virus;t__ 0 0 0 0 0 0 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6 6 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sewage-associated circular DNA molecule;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wenzhou weivirus-like virus 1;t__ 0 0 0 0 0 0 0 92 92 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Chayote yellow mosaic Benin betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Sida yellow mosaic virus-[China]-associated DNA beta;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Duck circovirus;t__Mulard duck circovirus 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-7;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__unclassified viruses;c__Magnaporthe oryzae RNA virus;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__unclassified viruses;c__Papaya leaf curl Faisalabad virus;o__;f__;g__;s__;t__ 3 0 0 0 0 0 0 51 54 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Raven circovirus;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Sheep faeces associated smacovirus 2;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__;s__Microviridae Bog9017_22;t__ 0 0 0 0 0 0 0 93 93 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Circovirus-like genome DCCV-4;t__ 0 0 0 0 0 0 0 59 59 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mesta yellow vein mosaic Bahraich virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 7;t__ 0 0 0 0 0 0 0 77 77 k__Viruses;p__Genomoviridae;c__Gemygorvirus;o__;f__;g__;s__Sewage derived gemygorvirus 1;t__Human genital-associated circular DNA virus-1 0 0 0 0 0 0 0 44 44 k__Viruses;p__unclassified RNA viruses;c__unclassified 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viruses;o__;f__;g__;s__Fusarium graminearum dsRNA mycovirus-4;t__ 0 0 0 0 0 0 0 80 80 k__ArchaeaPlasmid;p__Euryarchaeota;c__Thermococci;o__Thermococcales;f__Thermococcaceae;g__Pyrococcus;s__Pyrococcus abyssi;t__Pyrococcus abyssi GE5 0 0 0 0 0 0 0 68 68 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Ctenophore-associated circular virus 2;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__ssDNA viruses;c__Microviridae;o__;f__;g__Alpha3microvirus;s__Escherichia virus phiK;t__ 0 0 0 0 0 5 0 116 121 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Beak and feather disease virus;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Ghana virus;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Okra yellow crinkle Cameroon alphasatellite;t__Okra yellow crinkle Cameroon alphasatellite [CM:Lys1sp2:09] 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Malvastrum yellow mosaic alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tomato leaf curl alphasatellite;t__ 0 0 0 0 0 1 0 26 27 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Okra leaf curl Mali virus satellite DNA beta;t__ 0 0 0 0 0 2 0 24 26 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 10;t__ 0 0 0 0 0 0 0 98 98 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Po-Circo-like virus 51;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Chicken stool-associated gemycircularvirus;t__ 0 0 0 0 0 0 0 42 42 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Hsinchu virus;t__Ramie mosaic virus 0 0 0 0 0 0 0 107 107 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 1;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Dragonfly larvae associated circular virus-10;t__ 0 0 0 0 0 0 0 45 45 k__Viruses;p__dsRNA viruses;c__Partitiviridae;o__;f__;g__;s__Amasya cherry disease-associated mycovirus;t__ 0 0 0 0 0 0 0 40 40 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Ustilaginoidea virens RNA virus 5;t__ 0 0 0 0 0 0 0 104 104 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 1;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Jatropha leaf curl virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cardamom bushy dwarf virus satellite;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Porcine stool-associated circular virus 3;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__Satellites;c__Satellite Nucleic 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Sea Squirt associated virus;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__Satellites;c__ssDNA satellites;o__;f__;g__;s__Ctenophore-associated circular genome 1;t__ 0 0 0 0 0 0 0 24 24 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai sobemo-like virus 24;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sugarcane streak Reunion virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Narnaviridae;g__Narnavirus;s__Saccharomyces 20S RNA narnavirus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Human associated gemykibivirus 2;t__Gemycircularvirus SL1 0 0 0 0 0 0 0 43 43 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Chickadee associated gemycircularvirus 1;t__Poecile atricapillus GI tract-associated gemycircularvirus 0 0 0 0 0 0 0 43 43 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Black howler monkey smacovirus;t__ 0 0 0 0 0 0 0 49 49 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Malvastrum yellow vein virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai narna-like virus 1;t__ 0 0 0 0 0 0 0 51 51 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Littorina sp. associated circular virus;t__ 0 0 0 0 0 0 0 44 44 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Gerygone associated gemycircularvirus 1;t__Faeces associated gemycircularvirus 6 0 0 0 0 0 0 0 45 45 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Betanodavirus;s__Striped Jack nervous necrosis virus;t__ 0 0 0 0 0 0 0 88 88 k__Viruses;p__Retro-transcribing viruses;c__Hepadnaviridae;o__;f__;g__;s__Bat hepatitis virus;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Blackcurrant reversion virus satellite RNA;t__ 0 0 0 0 0 0 0 28 28 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan spider virus 7;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum leaf curl Philippines betasatellite;t__ 0 0 0 0 0 0 0 13 13 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Circovirus-like genome RW-A;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum leaf curl Buea betasatellite;t__ 0 0 0 0 0 0 0 25 25 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__Sewage-associated circular DNA virus-37;t__ 0 0 0 0 0 0 0 43 43 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ageratum leaf curl Cameroon alphasatellite;t__ 0 0 0 0 0 2 0 25 27 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Changjiang tombus-like virus 10;t__ 0 0 0 0 0 0 0 75 75 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Mungbean yellow mosaic virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__ssDNA viruses;c__unclassified ssDNA viruses;o__;f__;g__;s__McMurdo Ice Shelf pond-associated circular DNA virus-1;t__ 0 0 0 0 0 0 0 41 41 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Sweet potato leaf curl virus associated satellite;t__ 0 0 0 0 0 0 0 14 14 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tomato leaf curl Philippines virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__Circovirus;s__Mink circovirus;t__ 0 0 0 0 0 0 0 35 35 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Alabad virus;t__ 0 0 0 0 0 1 0 53 54 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bhendi yellow vein Delhi virus;t__Bhendi yellow vein Delhi virus [2004:New Delhi] 0 0 0 0 0 1 0 54 55 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Faba bean necrotic stunt alphasatellite 1;t__ 0 0 0 0 0 0 0 20 20 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Cotton leaf curl Burewala virus;t__ 0 0 0 0 0 23 0 32 55 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ageratum yellow leaf curl betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Croton yellow vein virus;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__TYLCCNV-[Y322] satellite DNA beta;t__ 0 0 0 0 0 2 0 24 26 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Palaemonetes kadiakensis Mississippi grass shrimp associated circular virus;t__ 0 0 0 0 0 0 0 37 37 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei narna-like virus 3;t__ 0 0 0 0 0 0 0 56 56 k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Gorilla smacovirus;t__ 0 0 0 0 0 0 0 50 50 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Milk vetch dwarf C3 alphasatellite;t__ 0 0 0 0 0 0 0 19 19 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Vernonia yellow vein betasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__New World begomovirus associated satellite DNA;t__New World begomovirus associated satellite DNA isolate 177H3 0 0 0 0 0 0 0 13 13 k__Viruses;p__ssRNA viruses;c__ssRNA positive-strand viruses, no DNA stage;o__;f__Nodaviridae;g__Alphanodavirus;s__Pariacoto virus;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__ssDNA viruses;c__Circoviridae;o__;f__;g__;s__Avon-Heathcote Estuary associated circular virus 16;t__ 0 0 0 0 0 0 0 39 39 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei tombus-like virus 24;t__ 0 0 0 0 0 0 0 52 52 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Strawberry latent ringspot virus satellite RNA;t__ 0 0 0 0 0 0 0 22 22 k__Viruses;p__Genomoviridae;c__Gemycircularvirus;o__;f__;g__;s__Porcine associated gemycircularvirus 2;t__Faeces associated gemycircularvirus 2 0 0 0 0 0 0 0 43 43 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Tobacco leaf curl Zimbabwe virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Wuhan horsefly Virus 3;t__ 0 0 0 0 0 0 0 60 60 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Beihai tombus-like virus 19;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__dsRNA viruses;c__Totiviridae;o__;f__;g__Victorivirus;s__Ustilaginoidea virens RNA virus L;t__ 0 0 0 0 0 0 0 113 113 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Hubei sobemo-like virus 7;t__ 0 0 0 0 0 0 0 53 53 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Okra leaf curl alphasatellite;t__ 0 0 0 0 0 0 0 27 27 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Cucumber mosaic virus satellite RNA;t__ 0 0 0 0 0 0 0 6 6 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Bombyx mori cypovirus 1 satellite RNA;t__ 0 0 0 0 0 0 0 12 12 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Jatropha yellow mosaic India virus;t__ 0 0 0 0 0 0 0 55 55 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Ustilaginoidea virens unassigned RNA virus HNND-1;t__ 0 0 0 0 0 0 0 58 58 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Arabis mosaic virus large satellite RNA;t__ 0 0 0 0 0 0 0 22 22 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Pospiviroid;s__Mexican papita viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Mastrevirus;s__Sugarcane chlorotic streak virus;t__ 0 0 0 0 0 0 0 55 55 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k__Viruses;p__unclassified viruses;c__Smacovirusgroup;o__;f__;g__;s__Bovine faeces associated smacovirus 1;t__ 0 0 0 0 0 0 0 54 54 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Bamboo mosaic virus satellite RNA;t__ 0 0 0 0 0 0 0 16 16 k__Viruses;p__Virus families not assigned to an order;c__Aumaivirus;o__;f__;g__;s__Maize aumaivirus 1;t__Satellite maize white line mosaic virus 0 0 0 0 0 0 0 23 23 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Tomato bushy stunt virus satellite RNA;t__ 0 0 0 0 0 0 0 16 16 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Ethiopian tobacco bushy top virus satellite RNA;t__ 0 0 0 0 0 0 0 10 10 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Ipomoea begomovirus satellite DNA beta;t__ 0 0 0 0 0 0 0 13 13 k__Viruses;p__dsRNA viruses;c__unclassified dsRNA viruses;o__;f__;g__;s__Beauveria bassiana RNA virus 1;t__ 0 0 0 0 0 0 0 64 64 k__Viruses;p__unclassified RNA viruses;c__unclassified RNA viruses ShiM-2016;o__;f__;g__;s__Sanxia water strider virus 13;t__ 0 0 0 0 0 0 0 46 46 k__Viruses;p__unclassified viruses;c__Lake Sarah-associated circular molecule 3;o__;f__;g__;s__;t__ 0 0 0 0 0 0 0 21 21 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Melon chlorotic mosaic virus-associated alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Vernonia yellow vein Fujian virus alphasatellite;t__ 0 0 0 0 0 0 0 26 26 k__Viruses;p__Genomoviridae;c__Gemykibivirus;o__;f__;g__;s__Bovine associated gemykibivirus 1;t__HCBI8.215 virus 0 0 0 0 0 0 0 43 43 k__BacteriaPlasmid;p__Proteobacteria;c__Betaproteobacteria;o__Burkholderiales;f__Alcaligenaceae;g__Bordetella;s__Bordetella trematum;t__ 0 0 0 0 0 0 0 107 107 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Small begomovirus-associated satellite;t__ 0 0 0 0 0 0 0 13 13 k__Viruses;p__Satellites;c__Tolecusatellitidae;o__;f__;g__;s__Malvastrum leaf 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families not assigned to an order;c__Papanivirus;o__;f__;g__;s__Panicum papanivirus 1;t__Panicum mosaic satellite virus 0 0 0 0 0 0 0 16 16 k__Viruses;p__ssDNA viruses;c__Geminiviridae;o__;f__;g__Begomovirus;s__Bean golden mosaic virus;t__ 0 0 0 0 0 0 0 51 51 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Coleviroid;s__Coleus blumei viroid 2;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Coleviroid;s__Coleus blumei viroid 1;t__ 0 0 0 0 0 0 0 4 4 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Citrus viroid VI;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__;g__;s__Rubber viroid India/2009;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Rice yellow mottle virus satellite;t__ 0 0 0 0 0 0 0 4 4 k__Viroids;p__;c__;o__;f__;g__;s__Cherry leaf scorch small circular viroid-like RNA 1;t__ 0 0 0 0 0 0 0 8 8 k__Viroids;p__;c__;o__;f__Avsunviroidae;g__Avsunviroid;s__Avocado sunblotch viroid;t__ 0 0 0 0 0 0 0 4 4 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Acids;o__;f__;g__;s__Solanum nodiflorum mottle virus satellite RNA;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Velvet tobacco mottle virus Satellite RNA;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Turnip crinkle virus satellite RNA;t__ 0 0 0 0 0 0 0 4 4 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Hostuviroid;s__Hop stunt viroid;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Cocadviroid;s__Citrus bark cracking viroid;t__ 0 0 0 0 0 0 0 5 5 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Coleviroid;s__Coleus blumei viroid 6;t__ 0 0 0 0 0 0 0 6 6 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Australian grapevine viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Satellites of Trichomonas vaginalis T1 virus;t__ 0 0 0 0 0 0 0 9 9 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Coleviroid;s__Coleus blumei viroid 3;t__ 0 0 0 0 0 0 0 7 7 k__Viroids;p__;c__;o__;f__;g__;s__Apple fruit crinkle viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Cocadviroid;s__Coconut cadang-cadang viroid;t__ 0 0 0 0 0 0 0 4 4 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Cocadviroid;s__Hop latent viroid;t__ 0 0 0 0 0 0 0 5 5 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Apscaviroid;s__Citrus viroid V;t__ 0 0 0 0 0 0 0 5 5 k__Viroids;p__;c__;o__;f__Avsunviroidae;g__Pelamoviroid;s__Chrysanthemum chlorotic mottle viroid;t__ 0 0 0 0 0 0 0 7 7 k__Viroids;p__;c__;o__;f__;g__;s__Apple hammerhead viroid-like circular RNA;t__ 0 0 0 0 0 0 0 8 8 k__Viroids;p__;c__;o__;f__Pospiviroidae;g__Coleviroid;s__Coleus blumei viroid 5;t__ 0 0 0 0 0 0 0 5 5 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Arabis mosaic virus small satellite RNA;t__ 0 0 0 0 0 0 0 5 5 k__Viruses;p__Satellites;c__Satellite Nucleic Acids;o__;f__;g__;s__Arabis mosaic virus small satellite RNA barley/CHE/1991;t__ 0 0 0 0 0 0 0 6 6